Cucsat.G16774 (gene) Cucumber (B10) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.AATCAAACTTCTAACTTGGAGTTTGGTTTAAAATAAGAAATAAAAGAGGAGAGGAAATGGAAGGACGAGGAGAGGGTCCGTAATTTCTCTTAAACTGACACTGAACACAACCACTCATTCCCTCTCACCTTTTCCCTTCTTCTCGCCGGCGATCTTCTTCCCCATCAACCTCCGGCCTCCACGCCCGCAAAGCTTCAAGATTCCCTCACCCGTTTCTCCATCATGCACTTTCTGTTCTAGGGTTCCTTTCCTTTCCTTTCCTTTCCTTTCCCCTCTTCTCTGTTTCCTGGTGAGTGACTTCACTGATTCTCCTCTCATTGTTTTGTTTGTTTCTCTCCACAATGCCTTGCTTTCTGCCAACGTTAAATGGTCCCCATGTTCGTAACGCTCTTTTAGAAGTACGTTTTCGGGTCTAATTCGTTATCAGGTCTCGCTTTACTATGCCCAATTTTGCGGAATGGAATGTTATCCAATTTTGTCTCTTTTTTAATTTTATTCTCATTTCTCTTGGGCAATGTGCGTCTGTTGTGGGATGGGAAATGTTGATAAAACCTTCTCCCGGTAGTTTTATGTCTTGGAATTTCAATCTTTTCTTCATTTCTTGTAACTTTTGATGGGTTGTTGAGATAGAACATTGAGGCATTTGATATTTGCGGATCTGCTCTGTATAATTCACTCATATAGTTCGTTTACTCTTTCCTGCTGTTTCCATTGACTTGTATACTTTTGTAGGTGATTAATGGACTGCCAATCTAGTCACACATTTGATTCAGATGAAAGTGATATTGATATTCAGACTGAAATTTATGAGAAGGGTGGGAGTATAGACGATATTCGTAATGACTTGGATTTTTGCTTGCGTGACGATGATAAGGTAGCAGAACAATCTGTTGTTGATTTGCCTATGGATGGAGTAGAACCATACATAGGTATGGAGTTCAGTTCTAGAGATGAAGCTAGAGAATTCTATGTTAATTATGGTAGGCGTGTTGGATTCACCGTTCGAATACATCATAATCGTCGTTCCCGTGTAAACAATCAGGTGATTGGTCAGGATTTTGTCTGCTCAAAAGAAGGATTTCGTGCTAAGAAGTATGTATGCAGAAAAGACAGGATACTTCCAGCACCACCAATTACTCGAGAGGGATGTCAAGCAATGATGAGATTGGCTTTAAGGGATGGAGGGAAGTGGGCTGTCACTAAATTTGTTAAAGATCATAATCATCTGTTACTGAGTCCTAGTAAAGTCCCATGGAAAGGATCTGGAAAAAACTTGAGCGAGGTATGTTTTAGGCTTGTTTGTTTTAATAACTAATATACTCTCCCATATGCATTTCTATGGATTATTGCCTGTCTTGTTATAATTCAGGGTGTATTGGTTTTGTTTCCTATCTTGTTGGTTATCAAACTTGCTTTATCATGACCTTACTTGAACAAGATTTGTCAATAATTTGTACAACTATGTCCTTGAGTTCAAGCTTTGCTTTGTCAGTTTGCATTAGAAAACTATTAAATCATCAAACCCTAGAATCGAACTTTTGGTTTGACAATTGTCTTTTGTGTAGAAAGAAAAGGCATTGAGGACCTTGTGGTTCTTACTTCTTTTTTCCAACATGCTTGATGGGGTACCTTGAATTGGATTTTTCTTTGAAATTCAGTTGTTGTCATCGCTACTACAGCTGCGAGATTTAGAATGAATAATTGAAATTCTAGTTTGTGTTCCTTTCCCTTTAAGTGGTAGAGTTTCTTTTATCATCAATTTTATGTTGTGTATTCTATAATACTGCCATTGTCACTTGTCGGTTGGTTAATGTAATATAAAATATCAACTTTAGGGTCAACATTTTATCAATGATTTTACATCTAACATATTTCGTGTCGAGAGGAAGCCATCTCTAGTCTATTCCCATGGTTTTGCCATAGTTTGACAGCACTATTCATTCATCTAATTGTCTAGCCAAAACCATCTTTTTCTTAAATGGATCTTCAGTTTATGTTTCTATATCAATATGATTATCTGGCATGCACCCAAACGTGTTTATTATTCTACCTTTTGACTAAATTGGTAAGAGTTAACCTTCCAGCTTTTCAGTTTGAATGGTTATGATTCTTCATTTTCTTCATATCTGGAATTCTTATTTGAAAGCATTAATGTAACCATTCTCTTGAAGCTTTTAGCTTTTATCATCTTTTATCATCTTTTATCATCTTTTATCATCTTTAGCTTTTCATCCTGCGCTTGTTCTTTCGCAGGATGAAAAGGATAAGCGGATTCGAGAGTTATCTCTGGAGTTGTACAATGAGAGGCAGAAATATAAGAGAAAATGTGCTGCATATGAAGAACAATTGAAAACAATTTGGAAGGAGTTGGAAATGCACACAGAATGTATATCAAACAAAGTTGCAGAAGTAGTAAAAAGCATTAGAGAAGTTGAGGAGGAAGAAGAATCAAAAGGTTCGAATGAAAGGTGGATTTAAATTATCATAACTGCACTAACTTATCATATATTATTATATCTTAGGTATGGGTTTTTGGTATCCAAAATTTAACTCTCATTTGTAGATGGATAATGACTTCTTTGAGAAGCATTTTAGTGTATAAAGTATTTATCCATATGGCATGCTGCTTGAAATCTGGAAACTTGTGTGACCTGGCAATGACGTGGATTTTGTCATACTAGATAATAGATATAAACGTATCTATTAAAAGGAGACAAAAGGTATCTTTGGTGACATTCTTTTTGCCGTCTGTTGTTTTTCTTTAATTCTTTTTCTCATTCATGCTTT ATGGACTGCCAATCTAGTCACACATTTGATTCAGATGAAAGTGATATTGATATTCAGACTGAAATTTATGAGAAGGGTGGGAGTATAGACGATATTCGTAATGACTTGGATTTTTGCTTGCGTGACGATGATAAGGTAGCAGAACAATCTGTTGTTGATTTGCCTATGGATGGAGTAGAACCATACATAGGTATGGAGTTCAGTTCTAGAGATGAAGCTAGAGAATTCTATGTTAATTATGGTAGGCGTGTTGGATTCACCGTTCGAATACATCATAATCGTCGTTCCCGTGTAAACAATCAGGTGATTGGTCAGGATTTTGTCTGCTCAAAAGAAGGATTTCGTGCTAAGAAGTATGTATGCAGAAAAGACAGGATACTTCCAGCACCACCAATTACTCGAGAGGGATGTCAAGCAATGATGAGATTGGCTTTAAGGGATGGAGGGAAGTGGGCTGTCACTAAATTTGTTAAAGATCATAATCATCTGTTACTGAGTCCTAGTAAAGTCCCATGGAAAGGATCTGGAAAAAACTTGAGCGAGGATGAAAAGGATAAGCGGATTCGAGAGTTATCTCTGGAGTTGTACAATGAGAGGCAGAAATATAAGAGAAAATGTGCTGCATATGAAGAACAATTGAAAACAATTTGGAAGGAGTTGGAAATGCACACAGAATGTATATCAAACAAAGTTGCAGAAGTAGTAAAAAGCATTAGAGAAGTTGAGGAGGAAGAAGAATCAAAAGGTTCGAATGAAAGGTGGATTTAA MDCQSSHTFDSDESDIDIQTEIYEKGGSIDDIRNDLDFCLRDDDKVAEQSVVDLPMDGVEPYIGMEFSSRDEAREFYVNYGRRVGFTVRIHHNRRSRVNNQVIGQDFVCSKEGFRAKKYVCRKDRILPAPPITREGCQAMMRLALRDGGKWAVTKFVKDHNHLLLSPSKVPWKGSGKNLSEDEKDKRIRELSLELYNERQKYKRKCAAYEEQLKTIWKELEMHTECISNKVAEVVKSIREVEEEEESKGSNERWI Homology
BLAST of Cucsat.G16774 vs. ExPASy Swiss-Prot
Match: Q9SAC0 (15-cis-zeta-carotene isomerase, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=Z-ISO PE=1 SV=1) HSP 1 Score: 165.6 bits (418), Expect = 5.6e-40 Identity = 99/181 (54.70%), Postives = 124/181 (68.51%), Query Frame = 0
BLAST of Cucsat.G16774 vs. ExPASy Swiss-Prot
Match: B4FHU1 (15-cis-zeta-carotene isomerase, chloroplastic OS=Zea mays OX=4577 PE=1 SV=1) HSP 1 Score: 152.9 bits (385), Expect = 3.8e-36 Identity = 94/185 (50.81%), Postives = 114/185 (61.62%), Query Frame = 0
BLAST of Cucsat.G16774 vs. NCBI nr
Match: XP_031740105.1 (15-cis-zeta-carotene isomerase, chloroplastic isoform X2 [Cucumis sativus]) HSP 1 Score: 366 bits (939), Expect = 1.20e-124 Identity = 191/191 (100.00%), Postives = 191/191 (100.00%), Query Frame = 0
BLAST of Cucsat.G16774 vs. NCBI nr
Match: XP_004152101.1 (15-cis-zeta-carotene isomerase, chloroplastic isoform X1 [Cucumis sativus] >KGN53082.1 hypothetical protein Csa_015404 [Cucumis sativus]) HSP 1 Score: 366 bits (939), Expect = 1.80e-124 Identity = 191/191 (100.00%), Postives = 191/191 (100.00%), Query Frame = 0
BLAST of Cucsat.G16774 vs. NCBI nr
Match: TYK16983.1 (15-cis-zeta-carotene isomerase [Cucumis melo var. makuwa]) HSP 1 Score: 334 bits (857), Expect = 1.66e-113 Identity = 178/191 (93.19%), Postives = 179/191 (93.72%), Query Frame = 0
BLAST of Cucsat.G16774 vs. NCBI nr
Match: KAA0044603.1 (15-cis-zeta-carotene isomerase [Cucumis melo var. makuwa]) HSP 1 Score: 334 bits (857), Expect = 4.19e-112 Identity = 178/191 (93.19%), Postives = 179/191 (93.72%), Query Frame = 0
BLAST of Cucsat.G16774 vs. NCBI nr
Match: XP_008453974.1 (PREDICTED: 15-cis-zeta-carotene isomerase, chloroplastic [Cucumis melo]) HSP 1 Score: 334 bits (857), Expect = 4.78e-112 Identity = 178/191 (93.19%), Postives = 179/191 (93.72%), Query Frame = 0
BLAST of Cucsat.G16774 vs. ExPASy TrEMBL
Match: A0A0A0KXF1 (NnrU domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G015720 PE=4 SV=1) HSP 1 Score: 366 bits (939), Expect = 8.71e-125 Identity = 191/191 (100.00%), Postives = 191/191 (100.00%), Query Frame = 0
BLAST of Cucsat.G16774 vs. ExPASy TrEMBL
Match: A0A5D3CYJ4 (15-cis-zeta-carotene isomerase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold130G001240 PE=4 SV=1) HSP 1 Score: 334 bits (857), Expect = 8.03e-114 Identity = 178/191 (93.19%), Postives = 179/191 (93.72%), Query Frame = 0
BLAST of Cucsat.G16774 vs. ExPASy TrEMBL
Match: A0A5A7TMA2 (15-cis-zeta-carotene isomerase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold46G003540 PE=4 SV=1) HSP 1 Score: 334 bits (857), Expect = 2.03e-112 Identity = 178/191 (93.19%), Postives = 179/191 (93.72%), Query Frame = 0
BLAST of Cucsat.G16774 vs. ExPASy TrEMBL
Match: A0A1S3BYR9 (15-cis-zeta-carotene isomerase, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103494534 PE=4 SV=1) HSP 1 Score: 334 bits (857), Expect = 2.31e-112 Identity = 178/191 (93.19%), Postives = 179/191 (93.72%), Query Frame = 0
BLAST of Cucsat.G16774 vs. ExPASy TrEMBL
Match: A0A6J1I3V9 (15-cis-zeta-carotene isomerase, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111470740 PE=4 SV=1) HSP 1 Score: 288 bits (737), Expect = 4.23e-94 Identity = 159/194 (81.96%), Postives = 166/194 (85.57%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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