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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. ATGAAAGATGAAGAACAGTTTATGTTATAGACGAAGCTAATTCTTCCTTTTCTTCTTTGTTACCTTCATGCTTACAACAAATTTCAGCTTGGTCATAGTTGGATTGGCATTTCCAGGCATTGATGATGAAGGGTCCTTGGATATCATTGTTTTCAGTGAAGGTATCACACTCTTGAATCTCCAATATCTCTACTCTGCGGTTGGTCTTCTTCCTTATTTTGATTGCTATATCTTGAGGGCTAAACTTTCCACAAACGCTTACCCTGCACTGCTTTTGTTCTATCAAATGGTCCTCCAACTCTATCAAGAAGACAAGGATTTACATGTCATAAGTTACCGAATAGAATCCATTGAAGAGAGACAGAGAGAAAATAGTCAGCCATATTAATTTCTCTAGAGAAAAAGAGATAAAAAGAGAGAGATTTCACCTTTTATACTGAGAAGAGCTCTTCTTACTTTCCTGTAACATCCATTACAGTCCATGTGAATCCTCAAAACCATCCAGAAAAACTGCCATAGTTGTCAAGGGAAAACAGTTCAATATTGCCAATGAAGAAGAAGAATGGAAAAAGTTGGGTAAGATTGAACTTGCCTTTCCAGTCATTAAATCACTGACAAAAAAAAAAAAACAGAACCTTTCTCCAGGAATCTAAACCCCTATGATGCTTAAACACAGAGGCAGAGAGAAAAACTGATGGGTTTCTCCCAAAACTTGAAAGGGATGGACTTCAAAATCTGGGTTTAACGATGGTATTGATTGGCGAGAGAATATCAAAACATTGAATAATAACAACAATATTATTGGTATTAATATTTGGAACCTGATTCCGCATTGTGGTGCGTTGGTTGTTCGTTATTCTTGGCTTTTTTAGCTTTGCTTCTCCCTTCATGTTTTTTCTATGGAGAAAAAGAAGGTATCCTTCCTTTAGCCAGAAAGCCATTATTCTTTTCCACACCATAAGTCTATGCTTCTCCTTCAAAAATACATTAAAGGTAGCAAGCCATGGCAGCAACCATTTAGAAAACATCCGTCTTTTGCTTTATATGAAGGAATATTCCAAATCTTTAGAGTTGTGTAATCGAACTTCCTTTGGTAAGTGTTCTAACTTATCCCAAGTTAAGGCAGCATAATCTTATAAACCTTTGTCCATCCGAGCATAGCGAATGTCTCAAGGCACCAATTATCTTTCTAAAGATCAATTGTTTGATCCTTCATCAAGCGATAACTGAACTAACACAAATTCAAACCTTGACAAAGCCAAATTTAACAAACGTAGACAAAGTAGAAAGCTCAAACAAATGTCAAAGTCTTGTTTTCCTTAGCATCAAACCCTGTTGTTAAGATTCTGAATGTATTTTATTCTTCCTTGCACTAAACTTGAAGATGATGCGACTTTAAGAATCATTTTCAATGTGCGAAGATTAGACACAAATTCGAGAGAGGAAGAAATTATGGAAAGAATTACAAATTTCATTATAATTTCATTATTATTTTGGGTTGAAATGACTGGAAATAAAAGTGGGATTTACATCATTTCTTCCAAGGGTAGGCTAACTGATAGGAATTGATAGAACCACGCAATAAGAAAATCCCACCGTCTTGAGCAGACCAAACACAGTTATGATCATTACATTCATCGCTAAGCCGGCTTCCTTCTTCCGGCCAGAAAACATCACCAGTAACCTGTCCATATTTGCTGCTAAAATGGCACCAAAACTGTGTGGTTTGCCAAATATTTTCTTTGAACTTCAAGAAGTAGTTATCCCCTTGCTTGATCTCATGCCTGCCCAAATCGTTGTCCTTTGATTTGCAGTGAACCATCAAAGTTGAATCGATCATATGATTATAAATGGTCACTTGCCATCGAGAAAATGGAAGCTGTACCTTGGATTCTGTAGGTTGTGCAAAGCATGGCTTCATAAGCATGTTTGATCCCAAACCCAGCAATAAAATGAAACATAATGGGTTTACAGACTCCATTTTCTATGGAGTTTGGTCACTTTCTTTTTCCCTTTTTGACAAAACCCTTGTTTGTTTTGTTTTATATATACCCAAATTGAGTTGCTATAATGGCATGTTTCTCCTTAATTTTCTCACCTATTTAGACCACTCCTTAGCTGCTCTCTCTTTTAGTAACGGATTTTGTATTTTATTGGTTACTTTCATTTCTACGTTCAACTATTTATGATTATTAATTACCCATGTTAAGTTTAAATAAATGTCCACCATTCATTATTTACGTGCAACAAAATTAGCTAAAATATTAAGAATTTATTTTTGTAACCTATGCTTTTTATTTCAATAAAGATGAAAGAGAGGAATGTTTGACCTTACATTCATTATCACACCAGCTTATTCACGAATTGGTCCATCCTACCATGAAATATTATGTTTGTTACTTTATTTTATGCAGGATCTGGGAAGGTTATTTTGATATTGCTCTATTTATTGATTGAAATTTCAAAATTGTAAAGGACTATGAATGAAACAATAAGAACAGACATTCCCAAA mRNA sequence ATGAAAGATGAAGAACACTTGGTCATAGTTGGATTGGCATTTCCAGGCATTGATGATGAAGGGTCCTTGGATATCATTGTTTTCAGTGAAGGTATCACACTCTTGAATCTCCAATATCTCTACTCTGCGGTTGGTCTTCTTCCTTATTTTGATTGCTATATCTTGAGGGCTAAACTTTCCACAAACGCTTACCCTGCACTGCTTTTGTTCTATCAAATGGTCCTCCAACTCTATCAAGAAGACAAGGATTTACATGTCATAAGTTACCGAATAGAATCCATTGAAGAGAGACAGAGAGAAAATAGTCAGCCATATTAATTTCTCTAGAGAAAAAGAGATAAAAAGAGAGAGATTTCACCTTTTATACTGAGAAGAGCTCTTCTTACTTTCCTGTAACATCCATTACAGTCCATGTGAATCCTCAAAACCATCCAGAAAAACTGCCATAGTTGTCAAGGGAAAACAGTTCAATATTGCCAATGAAGAAGAAGAATGGAAAAAGTTGGGTAAGATTGAACTTGCCTTTCCAGTCATTAAATCACTGACAAAAAAAAAAAAACAGAACCTTTCTCCAGGAATCTAAACCCCTATGATGCTTAAACACAGAGGCAGAGAGAAAAACTGATGGGTTTCTCCCAAAACTTGAAAGGGATGGACTTCAAAATCTGGGTTTAACGATGGTATTGATTGGCGAGAGAATATCAAAACATTGAATAATAACAACAATATTATTGGTATTAATATTTGGAACCTGATTCCGCATTGTGGTGCGTTGGTTGTTCGTTATTCTTGGCTTTTTTAGCTTTGCTTCTCCCTTCATGTTTTTTCTATGGAGAAAAAGAAGGTATCCTTCCTTTAGCCAGAAAGCCATTATTCTTTTCCACACCATAAGTCTATGCTTCTCCTTCAAAAATACATTAAAGGTAGCAAGCCATGGCAGCAACCATTTAGAAAACATCCGTCTTTTGCTTTATATGAAGGAATATTCCAAATCTTTAGAGTTGTGTAATCGAACTTCCTTTGGTAAGTGTTCTAACTTATCCCAAGTTAAGGCAGCATAATCTTATAAACCTTTGTCCATCCGAGCATAGCGAATGTCTCAAGGCACCAATTATCTTTCTAAAGATCAATTGTTTGATCCTTCATCAAGCGATAACTGAACTAACACAAATTCAAACCTTGACAAAGCCAAATTTAACAAACGTAGACAAAGTAGAAAGCTCAAACAAATGTCAAAGTCTTGTTTTCCTTAGCATCAAACCCTGTTGTTAAGATTCTGAATGTATTTTATTCTTCCTTGCACTAAACTTGAAGATGATGCGACTTTAAGAATCATTTTCAATGTGCGAAGATTAGACACAAATTCGAGAGAGGAAGAAATTATGGAAAGAATTACAAATTTCATTATAATTTCATTATTATTTTGGGTTGAAATGACTGGAAATAAAAGTGGGATTTACATCATTTCTTCCAAGGGTAGGCTAACTGATAGGAATTGATAGAACCACGCAATAAGAAAATCCCACCGTCTTGAGCAGACCAAACACAGTTATGATCATTACATTCATCGCTAAGCCGGCTTCCTTCTTCCGGCCAGAAAACATCACCAGTAACCTGTCCATATTTGCTGCTAAAATGGCACCAAAACTGTGTGGTTTGCCAAATATTTTCTTTGAACTTCAAGAAGTAGTTATCCCCTTGCTTGATCTCATGCCTGCCCAAATCGTTGTCCTTTGATTTGCAGTGAACCATCAAAGTTGAATCGATCATATGATTATAAATGGTCACTTGCCATCGAGAAAATGGAAGCTGTACCTTGGATTCTGTAGGTTGTGCAAAGCATGGCTTCATAAGCATGTTTGATCCCAAACCCAGCAATAAAATGAAACATAATGGGTTTACAGACTCCATTTTCTATGGAGTTTGGTCACTTTCTTTTTCCCTTTTTGACAAAACCCTTGTTTGTTTTGTTTTATATATACCCAAATTGAGTTGCTATAATGGCATGTTTCTCCTTAATTTTCTCACCTATTTAGACCACTCCTTAGCTGCTCTCTCTTTTAGTAACGGATTTTGTATTTTATTGGTTACTTTCATTTCTACGTTCAACTATTTATGATTATTAATTACCCATGTTAAGTTTAAATAAATGTCCACCATTCATTATTTACGTGCAACAAAATTAGCTAAAATATTAAGAATTTATTTTTGTAACCTATGCTTTTTATTTCAATAAAGATGAAAGAGAGGAATGTTTGACCTTACATTCATTATCACACCAGCTTATTCACGAATTGGTCCATCCTACCATGAAATATTATGTTTGTTACTTTATTTTATGCAGGATCTGGGAAGGTTATTTTGATATTGCTCTATTTATTGATTGAAATTTCAAAATTGTAAAGGACTATGAATGAAACAATAAGAACAGACATTCCCAAA Coding sequence (CDS) ATGAAAGATGAAGAACACTTGGTCATAGTTGGATTGGCATTTCCAGGCATTGATGATGAAGGGTCCTTGGATATCATTGTTTTCAGTGAAGGTATCACACTCTTGAATCTCCAATATCTCTACTCTGCGGTTGGTCTTCTTCCTTATTTTGATTGCTATATCTTGAGGGCTAAACTTTCCACAAACGCTTACCCTGCACTGCTTTTGTTCTATCAAATGGTCCTCCAACTCTATCAAGAAGACAAGGATTTACATGTCATAAGTTACCGAATAGAATCCATTGAAGAGAGACAGAGAGAAAATAGTCAGCCATATTAA Protein sequence MKDEEHLVIVGLAFPGIDDEGSLDIIVFSEGITLLNLQYLYSAVGLLPYFDCYILRAKLSTNAYPALLLFYQMVLQLYQEDKDLHVISYRIESIEERQRENSQPY
Homology
BLAST of CmaCh13G010290 vs. ExPASy TrEMBL
Match: A0A5D3BIS5 (Aspartyl protease APCB1 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G001890 PE=4 SV=1) HSP 1 Score: 117.1 bits (292), Expect = 4.5e-23 Identity = 58/66 (87.88%), Postives = 61/66 (92.42%), Query Frame = 0
Query: 16 GIDDEGSLDIIVFSEGITLLNLQYLYSAVGLLPYFDCYILRAKLSTNAYPALLLFYQMVL 75
GIDD+G LDIIVF EGITLLNLQYLYSAVG LPYFDCYILRAKL TNAYPA+LLFYQM L
Sbjct: 534 GIDDQGPLDIIVFIEGITLLNLQYLYSAVGFLPYFDCYILRAKLPTNAYPAMLLFYQMGL 593
Query: 76 QLYQED 82
QLYQ+D
Sbjct: 594 QLYQDD 599
BLAST of CmaCh13G010290 vs. NCBI nr
Match: TYJ98986.1 (aspartyl protease APCB1 isoform X2 [Cucumis melo var. makuwa]) HSP 1 Score: 117.1 bits (292), Expect = 9.3e-23 Identity = 58/66 (87.88%), Postives = 61/66 (92.42%), Query Frame = 0
Query: 16 GIDDEGSLDIIVFSEGITLLNLQYLYSAVGLLPYFDCYILRAKLSTNAYPALLLFYQMVL 75
GIDD+G LDIIVF EGITLLNLQYLYSAVG LPYFDCYILRAKL TNAYPA+LLFYQM L
Sbjct: 534 GIDDQGPLDIIVFIEGITLLNLQYLYSAVGFLPYFDCYILRAKLPTNAYPAMLLFYQMGL 593
Query: 76 QLYQED 82
QLYQ+D
Sbjct: 594 QLYQDD 599
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A5D3BIS5 | 4.5e-23 | 87.88 | Aspartyl protease APCB1 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E56... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| TYJ98986.1 | 9.3e-23 | 87.88 | aspartyl protease APCB1 isoform X2 [Cucumis melo var. makuwa] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0006508 |
proteolysis |
| molecular_function |
GO:0004190 |
aspartic-type endopeptidase activity |
|
