Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TCTAACTCAAGTGACATATTTGTGTATAAACTTGTTATTAATAAAAGATAACGAATTCAAATTTTGTTGATTTAAAAATAAAAGAAAAAAAAGAGAAAACTTGTAAAATTAAAAGAAGGGTGCAAGAAACAAATGAACAACTGACAACCGATTTAGGGCACACATTTGTGTCCGTTGTTGGAGAATTAGGTCCAGCATTGAATCGGCGAGAAAGCAAAGCCTCGGTCCGAGCGAAGATTCGTTGAATCGGAGGATTCCGATCTCTTCTCCGGTCATTTCTCCGATCGAATCCGATTTGCAGAAACACAGAGAAAGAAAGATGCGAGGAAGTGGAGGACCTCTTCTCTGCATCGGCGATCTTCTATGCGACGTCGGAGAAGAACAATCCGGCGAACGGAAGGGATCCAATCAAACCCCTAAATCTCCATCTTCTCCCTCTACTTCTCTTCCGCTCCAATCTCTTCAACCCACCGATCTCCCCAAACTCTTTCAGGTTACTATTTCCCACTCTTTTAATGCACCTTCTCTTATCGCGCTTCTCATTTCGTGTTCTATTTCAGCATAATTACCATCGGTTGAACAAAGCGTTTGATGATAACGATCACTCCTGGACAGCTTTGACATTAAAGGTACGGTGTTTCTTCATTCTATCTACCTTTTCCCTCACATACTTTGATGGGATTTCACATTTGGTTGTCAAGTTATCTATTCGTATATGCCTTCAACTGTTTGATCCTCCACGATTACTTAGTAGAGGGTCTTGCTCTCCAATTAGCAAGCAAGCCGGTAATTGGGTTTATATTTCTGTATGAAGAATATTTAGATCATACCCGAACATGATGTATAAAATATTGCCCATCTATGCAATCCAATATCGACCAAAAGATAAAAAAATAAAATAAAGAAAGATAAAATGTGGCTAGTATGACTTAAATATTTCTCTTTCTGTATACGAACTTTTTAGGTTTATGAACTATTTTGTAAAAGGGAGTAAACTATATATACTCTCTTAAAACTACTTAAATCTGTGTTTTCTTTCTCGTTTCTTTACAATTTTCTTCTGATTGTTGTTTTGATTTCTTTACAAATAATTAGATAGGGGACGATCATGAATTGTAGAGTGTTTTATGATTTACAAGGATCTTATAGCCTTTTTGCTATCTAGAAAATTGGGTTCTATTTCCTTATGACTGTATTTTGGTGGCATTTTCAGATGTGCAGTGCCCTTGACACTGCTGGTAAGTTGGTTGAATCAACCAACTCAAATTCCAGAGTTTTGTTGGACAAGGTTTTGGAGTTTGAACAGGTTTTGAAAAAGGGAGATTCTACAAGAGAGGCAGCCATGGCCATCCAAACCAGTTATAGCTCTCAAGTTGCTCAGGACTCCATTTCTTCTCAGAATCAAGGTTAGCATTTTGGCTTATACATTAAGGGCTTTTTCATAATTGAATCATGATTGAAATATTATCTTAAAATATCCTTGTTTGAGAAATTTCCATATTCATATAGCTTTGATTCATGCAATTTGTTTTCTTATGCAGTAGTTGTAGGTGAGATAAATTTGAGTTTTGATGATTTGTAACCATATGAAGTCAATAGAATAACAATGGAATGTATGGTTGGAGAGACATGGGGTTCCAAGTGTAGACAATTAGACATATCAAGGTTCCTTCAATATTGTGTTAATCTCTGGTTTCTTTTTATCTAAAACTTCGAAGTATCAATAAAAGCTTAGCCCAATTGGTATAGGTGTATGTATGGTTGTAATCAAAAGAAGTCATAAGTTCAAAATTTTCACCTCTAATTATTCTTGAACTCGAAAATTAGGGTTGATCATTATAATAGATAGATTTAATAACAGGAAATGGATGAGTATTGTAATGAAGAGGTCATGAGTTCTAAAACTTCAAATTTATGGTCAATCATTGTAATATATAGATTTGACAATACTTGGGTATTTCTCAACAGGC
mRNA sequence
TCTAACTCAAGTGACATATTTGTGTATAAACTTGTTATTAATAAAAGATAACGAATTCAAATTTTGTTGATTTAAAAATAAAAGAAAAAAAAGAGAAAACTTGTAAAATTAAAAGAAGGGTGCAAGAAACAAATGAACAACTGACAACCGATTTAGGGCACACATTTGTGTCCGTTGTTGGAGAATTAGGTCCAGCATTGAATCGGCGAGAAAGCAAAGCCTCGGTCCGAGCGAAGATTCGTTGAATCGGAGGATTCCGATCTCTTCTCCGGTCATTTCTCCGATCGAATCCGATTTGCAGAAACACAGAGAAAGAAAGATGCGAGGAAGTGGAGGACCTCTTCTCTGCATCGGCGATCTTCTATGCGACGTCGGAGAAGAACAATCCGGCGAACGGAAGGGATCCAATCAAACCCCTAAATCTCCATCTTCTCCCTCTACTTCTCTTCCGCTCCAATCTCTTCAACCCACCGATCTCCCCAAACTCTTTCAGCATAATTACCATCGGTTGAACAAAGCGTTTGATGATAACGATCACTCCTGGACAGCTTTGACATTAAAGATGTGCAGTGCCCTTGACACTGCTGGTAAGTTGGTTGAATCAACCAACTCAAATTCCAGAGTTTTGTTGGACAAGGTTTTGGAGTTTGAACAGGTTTTGAAAAAGGGAGATTCTACAAGAGAGGCAGCCATGGCCATCCAAACCAGTTATAGCTCTCAAGTTGCTCAGGACTCCATTTCTTCTCAGAATCAAGGTTAGCATTTTGGCTTATACATTAAGGGCTTTTTCATAATTGAATCATGATTGAAATATTATCTTAAAATATCCTTGTTTGAGAAATTTCCATATTCATATAGCTTTGATTCATGCAATTTGTTTTCTTATGCAGTAGTTGTAGGTGAGATAAATTTGAGTTTTGATGATTTGTAACCATATGAAGTCAATAGAATAACAATGGAATGTATGGTTGGAGAGACATGGGGTTCCAAGTGTAGACAATTAGACATATCAAGGTTCCTTCAATATTGTGTTAATCTCTGGTTTCTTTTTATCTAAAACTTCGAAGTATCAATAAAAGCTTAGCCCAATTGGTATAGGTGTATGTATGGTTGTAATCAAAAGAAGTCATAAGTTCAAAATTTTCACCTCTAATTATTCTTGAACTCGAAAATTAGGGTTGATCATTATAATAGATAGATTTAATAACAGGAAATGGATGAGTATTGTAATGAAGAGGTCATGAGTTCTAAAACTTCAAATTTATGGTCAATCATTGTAATATATAGATTTGACAATACTTGGGTATTTCTCAACAGGC
Coding sequence (CDS)
ATGCGAGGAAGTGGAGGACCTCTTCTCTGCATCGGCGATCTTCTATGCGACGTCGGAGAAGAACAATCCGGCGAACGGAAGGGATCCAATCAAACCCCTAAATCTCCATCTTCTCCCTCTACTTCTCTTCCGCTCCAATCTCTTCAACCCACCGATCTCCCCAAACTCTTTCAGCATAATTACCATCGGTTGAACAAAGCGTTTGATGATAACGATCACTCCTGGACAGCTTTGACATTAAAGATGTGCAGTGCCCTTGACACTGCTGGTAAGTTGGTTGAATCAACCAACTCAAATTCCAGAGTTTTGTTGGACAAGGTTTTGGAGTTTGAACAGGTTTTGAAAAAGGGAGATTCTACAAGAGAGGCAGCCATGGCCATCCAAACCAGTTATAGCTCTCAAGTTGCTCAGGACTCCATTTCTTCTCAGAATCAAGGTTAG
Protein sequence
MRGSGGPLLCIGDLLCDVGEEQSGERKGSNQTPKSPSSPSTSLPLQSLQPTDLPKLFQHNYHRLNKAFDDNDHSWTALTLKMCSALDTAGKLVESTNSNSRVLLDKVLEFEQVLKKGDSTREAAMAIQTSYSSQVAQDSISSQNQG
Homology
BLAST of Sed0028054 vs. NCBI nr
Match:
XP_023516408.1 (uncharacterized protein LOC111780279 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 223.8 bits (569), Expect = 9.8e-55
Identity = 120/152 (78.95%), Postives = 133/152 (87.50%), Query Frame = 0
Query: 1 MRGSGGPLLCIGDLLCDVGEEQSGERKGSNQTPKSPSSPSTS------LPLQSLQPTDLP 60
MRG+GGPLLCIGDLLCDVGEE++GE KGSN+TPKS S ++S LPL S P DLP
Sbjct: 1 MRGTGGPLLCIGDLLCDVGEEEAGEGKGSNETPKSVISSTSSSASVSTLPLASEIP-DLP 60
Query: 61 KLFQHNYHRLNKAFDDNDHSWTALTLKMCSALDTAGKLVESTNSNSRVLLDKVLEFEQVL 120
KLFQ NY +LNK+FDDNDHSWTALTLKMCSALDTA KLVESTNSNSR LL+K++E EQVL
Sbjct: 61 KLFQENYDQLNKSFDDNDHSWTALTLKMCSALDTASKLVESTNSNSRFLLEKIVELEQVL 120
Query: 121 KKGDSTREAAMAIQTSYSSQVAQDSISSQNQG 147
+KGDSTREAAMAIQTS+SSQVAQDSISSQNQG
Sbjct: 121 EKGDSTREAAMAIQTSFSSQVAQDSISSQNQG 151
BLAST of Sed0028054 vs. NCBI nr
Match:
KAG6602083.1 (DIS3-like exonuclease 2, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 222.6 bits (566), Expect = 2.2e-54
Identity = 119/152 (78.29%), Postives = 133/152 (87.50%), Query Frame = 0
Query: 1 MRGSGGPLLCIGDLLCDVGEEQSGERKGSNQTPKSPSSPSTS------LPLQSLQPTDLP 60
MRG+GGPLLCIGDLLCDVGEE++GE KGSN+TPKS S ++S LPL S P DLP
Sbjct: 1007 MRGTGGPLLCIGDLLCDVGEEEAGEGKGSNETPKSVISSTSSSASVSTLPLVSETP-DLP 1066
Query: 61 KLFQHNYHRLNKAFDDNDHSWTALTLKMCSALDTAGKLVESTNSNSRVLLDKVLEFEQVL 120
KLFQ NY +LNK+FDDNDHSWTALTLKMCSALDTA KLVESTNSNSR LL+K++E EQVL
Sbjct: 1067 KLFQENYDQLNKSFDDNDHSWTALTLKMCSALDTASKLVESTNSNSRFLLEKIVELEQVL 1126
Query: 121 KKGDSTREAAMAIQTSYSSQVAQDSISSQNQG 147
+KGDSTREAAMAIQTS+SSQVAQDSISS+NQG
Sbjct: 1127 EKGDSTREAAMAIQTSFSSQVAQDSISSRNQG 1157
BLAST of Sed0028054 vs. NCBI nr
Match:
KAG7032788.1 (hypothetical protein SDJN02_06838 [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 222.6 bits (566), Expect = 2.2e-54
Identity = 119/152 (78.29%), Postives = 133/152 (87.50%), Query Frame = 0
Query: 1 MRGSGGPLLCIGDLLCDVGEEQSGERKGSNQTPKSPSSPSTS------LPLQSLQPTDLP 60
MRG+GGPLLCIGDLLCDVGEE++GE KGSN+TPKS S ++S LPL S P DLP
Sbjct: 1 MRGTGGPLLCIGDLLCDVGEEEAGEGKGSNETPKSVISSTSSSASVSTLPLVSETP-DLP 60
Query: 61 KLFQHNYHRLNKAFDDNDHSWTALTLKMCSALDTAGKLVESTNSNSRVLLDKVLEFEQVL 120
KLFQ NY +LNK+FDDNDHSWTALTLKMCSALDTA KLVESTNSNSR LL+K++E EQVL
Sbjct: 61 KLFQENYDQLNKSFDDNDHSWTALTLKMCSALDTASKLVESTNSNSRFLLEKIVELEQVL 120
Query: 121 KKGDSTREAAMAIQTSYSSQVAQDSISSQNQG 147
+KGDSTREAAMAIQTS+SSQVAQDSISS+NQG
Sbjct: 121 EKGDSTREAAMAIQTSFSSQVAQDSISSRNQG 151
BLAST of Sed0028054 vs. NCBI nr
Match:
XP_022964546.1 (uncharacterized protein LOC111464539 [Cucurbita moschata])
HSP 1 Score: 222.2 bits (565), Expect = 2.8e-54
Identity = 119/152 (78.29%), Postives = 133/152 (87.50%), Query Frame = 0
Query: 1 MRGSGGPLLCIGDLLCDVGEEQSGERKGSNQTPKSPSSPSTS------LPLQSLQPTDLP 60
MRG+GGPLLCIGDLLCDVGEE++GE KGSN+TPKS S ++S LPL S P DLP
Sbjct: 1 MRGTGGPLLCIGDLLCDVGEEEAGEGKGSNETPKSVISSTSSSASVSTLPLVSETP-DLP 60
Query: 61 KLFQHNYHRLNKAFDDNDHSWTALTLKMCSALDTAGKLVESTNSNSRVLLDKVLEFEQVL 120
KLFQ NY +LNK+FDDNDHSWTALTLKMCSALDTA KLVESTNSNSR LL+K++E EQVL
Sbjct: 61 KLFQENYDQLNKSFDDNDHSWTALTLKMCSALDTASKLVESTNSNSRFLLEKIVELEQVL 120
Query: 121 KKGDSTREAAMAIQTSYSSQVAQDSISSQNQG 147
+KGDSTREAAMAIQTS+SSQVAQDSISSQ+QG
Sbjct: 121 EKGDSTREAAMAIQTSFSSQVAQDSISSQSQG 151
BLAST of Sed0028054 vs. NCBI nr
Match:
XP_022989818.1 (uncharacterized protein LOC111486891 [Cucurbita maxima])
HSP 1 Score: 219.5 bits (558), Expect = 1.8e-53
Identity = 116/152 (76.32%), Postives = 132/152 (86.84%), Query Frame = 0
Query: 1 MRGSGGPLLCIGDLLCDVGEEQSGERKGSNQTPKSPSSPSTS------LPLQSLQPTDLP 60
MRG+GGPLLCIGDLLCDVGEE++GE KGSN+TPKS S ++S LP+ S P DLP
Sbjct: 1 MRGTGGPLLCIGDLLCDVGEEEAGEGKGSNETPKSVISSTSSSASVSTLPVVSETP-DLP 60
Query: 61 KLFQHNYHRLNKAFDDNDHSWTALTLKMCSALDTAGKLVESTNSNSRVLLDKVLEFEQVL 120
KLFQ NY +LNK+FDDNDHSWTALTLKMCSALDTA KLVESTNSNSR LL+K++E EQ+L
Sbjct: 61 KLFQENYDQLNKSFDDNDHSWTALTLKMCSALDTASKLVESTNSNSRFLLEKIVELEQIL 120
Query: 121 KKGDSTREAAMAIQTSYSSQVAQDSISSQNQG 147
+KGDSTREAAMAIQTS+SSQV QDSISS+NQG
Sbjct: 121 EKGDSTREAAMAIQTSFSSQVTQDSISSRNQG 151
BLAST of Sed0028054 vs. ExPASy TrEMBL
Match:
A0A6J1HJ70 (uncharacterized protein LOC111464539 OS=Cucurbita moschata OX=3662 GN=LOC111464539 PE=4 SV=1)
HSP 1 Score: 222.2 bits (565), Expect = 1.4e-54
Identity = 119/152 (78.29%), Postives = 133/152 (87.50%), Query Frame = 0
Query: 1 MRGSGGPLLCIGDLLCDVGEEQSGERKGSNQTPKSPSSPSTS------LPLQSLQPTDLP 60
MRG+GGPLLCIGDLLCDVGEE++GE KGSN+TPKS S ++S LPL S P DLP
Sbjct: 1 MRGTGGPLLCIGDLLCDVGEEEAGEGKGSNETPKSVISSTSSSASVSTLPLVSETP-DLP 60
Query: 61 KLFQHNYHRLNKAFDDNDHSWTALTLKMCSALDTAGKLVESTNSNSRVLLDKVLEFEQVL 120
KLFQ NY +LNK+FDDNDHSWTALTLKMCSALDTA KLVESTNSNSR LL+K++E EQVL
Sbjct: 61 KLFQENYDQLNKSFDDNDHSWTALTLKMCSALDTASKLVESTNSNSRFLLEKIVELEQVL 120
Query: 121 KKGDSTREAAMAIQTSYSSQVAQDSISSQNQG 147
+KGDSTREAAMAIQTS+SSQVAQDSISSQ+QG
Sbjct: 121 EKGDSTREAAMAIQTSFSSQVAQDSISSQSQG 151
BLAST of Sed0028054 vs. ExPASy TrEMBL
Match:
A0A6J1JRF3 (uncharacterized protein LOC111486891 OS=Cucurbita maxima OX=3661 GN=LOC111486891 PE=4 SV=1)
HSP 1 Score: 219.5 bits (558), Expect = 8.9e-54
Identity = 116/152 (76.32%), Postives = 132/152 (86.84%), Query Frame = 0
Query: 1 MRGSGGPLLCIGDLLCDVGEEQSGERKGSNQTPKSPSSPSTS------LPLQSLQPTDLP 60
MRG+GGPLLCIGDLLCDVGEE++GE KGSN+TPKS S ++S LP+ S P DLP
Sbjct: 1 MRGTGGPLLCIGDLLCDVGEEEAGEGKGSNETPKSVISSTSSSASVSTLPVVSETP-DLP 60
Query: 61 KLFQHNYHRLNKAFDDNDHSWTALTLKMCSALDTAGKLVESTNSNSRVLLDKVLEFEQVL 120
KLFQ NY +LNK+FDDNDHSWTALTLKMCSALDTA KLVESTNSNSR LL+K++E EQ+L
Sbjct: 61 KLFQENYDQLNKSFDDNDHSWTALTLKMCSALDTASKLVESTNSNSRFLLEKIVELEQIL 120
Query: 121 KKGDSTREAAMAIQTSYSSQVAQDSISSQNQG 147
+KGDSTREAAMAIQTS+SSQV QDSISS+NQG
Sbjct: 121 EKGDSTREAAMAIQTSFSSQVTQDSISSRNQG 151
BLAST of Sed0028054 vs. ExPASy TrEMBL
Match:
A0A5D3BZV1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1415G00780 PE=4 SV=1)
HSP 1 Score: 213.8 bits (543), Expect = 4.9e-52
Identity = 113/152 (74.34%), Postives = 127/152 (83.55%), Query Frame = 0
Query: 1 MRGSGGPLLCIGDLLCDVGEEQSGERKGSNQTPKSPSSPSTSLPLQSL------QPTDLP 60
MRG+GGPLLCIGDLLCDVGEE++ E KG N+TPKS SPS+S S QP DLP
Sbjct: 1 MRGTGGPLLCIGDLLCDVGEEEAVEGKGLNETPKSIPSPSSSSSSVSTTLFDLSQPPDLP 60
Query: 61 KLFQHNYHRLNKAFDDNDHSWTALTLKMCSALDTAGKLVESTNSNSRVLLDKVLEFEQVL 120
+LFQ NY +LNK FDDNDHSWTALTLKMCSALDTA KLVESTNSNSR LL+K++E E VL
Sbjct: 61 QLFQENYDQLNKVFDDNDHSWTALTLKMCSALDTATKLVESTNSNSRFLLEKIVELEHVL 120
Query: 121 KKGDSTREAAMAIQTSYSSQVAQDSISSQNQG 147
+KGD+TREAAMAIQTSYSSQ+AQDSISS N+G
Sbjct: 121 EKGDATREAAMAIQTSYSSQIAQDSISSLNEG 152
BLAST of Sed0028054 vs. ExPASy TrEMBL
Match:
A0A1S3BE50 (uncharacterized protein LOC103488633 isoform X4 OS=Cucumis melo OX=3656 GN=LOC103488633 PE=4 SV=1)
HSP 1 Score: 213.8 bits (543), Expect = 4.9e-52
Identity = 113/152 (74.34%), Postives = 127/152 (83.55%), Query Frame = 0
Query: 1 MRGSGGPLLCIGDLLCDVGEEQSGERKGSNQTPKSPSSPSTSLPLQSL------QPTDLP 60
MRG+GGPLLCIGDLLCDVGEE++ E KG N+TPKS SPS+S S QP DLP
Sbjct: 1 MRGTGGPLLCIGDLLCDVGEEEAVEGKGLNETPKSIPSPSSSSSSVSTTLFDLSQPPDLP 60
Query: 61 KLFQHNYHRLNKAFDDNDHSWTALTLKMCSALDTAGKLVESTNSNSRVLLDKVLEFEQVL 120
+LFQ NY +LNK FDDNDHSWTALTLKMCSALDTA KLVESTNSNSR LL+K++E E VL
Sbjct: 61 QLFQENYDQLNKVFDDNDHSWTALTLKMCSALDTATKLVESTNSNSRFLLEKIVELEHVL 120
Query: 121 KKGDSTREAAMAIQTSYSSQVAQDSISSQNQG 147
+KGD+TREAAMAIQTSYSSQ+AQDSISS N+G
Sbjct: 121 EKGDATREAAMAIQTSYSSQIAQDSISSLNEG 152
BLAST of Sed0028054 vs. ExPASy TrEMBL
Match:
A0A0A0K969 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G040570 PE=4 SV=1)
HSP 1 Score: 211.5 bits (537), Expect = 2.4e-51
Identity = 112/152 (73.68%), Postives = 126/152 (82.89%), Query Frame = 0
Query: 1 MRGSGGPLLCIGDLLCDVGEEQSGERKGSNQTPKSPSSPSTSLPLQSL------QPTDLP 60
MRG+GGPLLCIGDLLCDVGE+++ E KG N+TP+S SPS+S S QP DLP
Sbjct: 1 MRGTGGPLLCIGDLLCDVGEDEAVEGKGLNETPRSIPSPSSSSSSVSTTIFDLSQPPDLP 60
Query: 61 KLFQHNYHRLNKAFDDNDHSWTALTLKMCSALDTAGKLVESTNSNSRVLLDKVLEFEQVL 120
KLFQ NY +LNK FDDNDHSWTALTLKMCSALDTA KLVESTNSNSR LL+K++E E VL
Sbjct: 61 KLFQENYDQLNKVFDDNDHSWTALTLKMCSALDTATKLVESTNSNSRFLLEKIVELEHVL 120
Query: 121 KKGDSTREAAMAIQTSYSSQVAQDSISSQNQG 147
+KGD+TREAAMAIQTSYSS VAQDSISS N+G
Sbjct: 121 EKGDATREAAMAIQTSYSSHVAQDSISSLNEG 152
BLAST of Sed0028054 vs. TAIR 10
Match:
AT4G08240.2 (unknown protein; Has 33 Blast hits to 33 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 33; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )
HSP 1 Score: 113.6 bits (283), Expect = 1.3e-25
Identity = 62/135 (45.93%), Postives = 89/135 (65.93%), Query Frame = 0
Query: 1 MRGSGGPLLCIGDLLCDVGEEQSGERKGSNQTPKSPSSPSTSLPLQSLQ-PTDLPKLFQH 60
MRG GGPLL IGDLL D+G+E S Q +P S S ++ P DL +LFQ
Sbjct: 1 MRGVGGPLLSIGDLLADLGDETG----HSPQNHPNPEVSSKSYSDDTISGPLDLTRLFQE 60
Query: 61 NYHRLNKAFDDNDHSWTALTLKMCSALDTAGKLVESTNSNSRVLLDKVLEFEQVLKKGDS 120
NY +LN AF +DHSWT+LTL++C++L+TA KLV +T +N+R+L +KV E E+++K+GDS
Sbjct: 61 NYDKLNDAFAGSDHSWTSLTLELCTSLETANKLVHATTTNARLLSEKVEELEKIVKRGDS 120
Query: 121 TREAAMAIQTSYSSQ 135
AA + + + +
Sbjct: 121 AVAAARTVHATVNQK 131
BLAST of Sed0028054 vs. TAIR 10
Match:
AT4G08240.1 (unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )
HSP 1 Score: 113.6 bits (283), Expect = 1.3e-25
Identity = 62/135 (45.93%), Postives = 89/135 (65.93%), Query Frame = 0
Query: 1 MRGSGGPLLCIGDLLCDVGEEQSGERKGSNQTPKSPSSPSTSLPLQSLQ-PTDLPKLFQH 60
MRG GGPLL IGDLL D+G+E S Q +P S S ++ P DL +LFQ
Sbjct: 1 MRGVGGPLLSIGDLLADLGDETG----HSPQNHPNPEVSSKSYSDDTISGPLDLTRLFQE 60
Query: 61 NYHRLNKAFDDNDHSWTALTLKMCSALDTAGKLVESTNSNSRVLLDKVLEFEQVLKKGDS 120
NY +LN AF +DHSWT+LTL++C++L+TA KLV +T +N+R+L +KV E E+++K+GDS
Sbjct: 61 NYDKLNDAFAGSDHSWTSLTLELCTSLETANKLVHATTTNARLLSEKVEELEKIVKRGDS 120
Query: 121 TREAAMAIQTSYSSQ 135
AA + + + +
Sbjct: 121 AVAAARTVHATVNQK 131
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| XP_023516408.1 | 9.8e-55 | 78.95 | uncharacterized protein LOC111780279 [Cucurbita pepo subsp. pepo] | [more] |
| KAG6602083.1 | 2.2e-54 | 78.29 | DIS3-like exonuclease 2, partial [Cucurbita argyrosperma subsp. sororia] | [more] |
| KAG7032788.1 | 2.2e-54 | 78.29 | hypothetical protein SDJN02_06838 [Cucurbita argyrosperma subsp. argyrosperma] | [more] |
| XP_022964546.1 | 2.8e-54 | 78.29 | uncharacterized protein LOC111464539 [Cucurbita moschata] | [more] |
| XP_022989818.1 | 1.8e-53 | 76.32 | uncharacterized protein LOC111486891 [Cucurbita maxima] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A6J1HJ70 | 1.4e-54 | 78.29 | uncharacterized protein LOC111464539 OS=Cucurbita moschata OX=3662 GN=LOC1114645... | [more] |
| A0A6J1JRF3 | 8.9e-54 | 76.32 | uncharacterized protein LOC111486891 OS=Cucurbita maxima OX=3661 GN=LOC111486891... | [more] |
| A0A5D3BZV1 | 4.9e-52 | 74.34 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
| A0A1S3BE50 | 4.9e-52 | 74.34 | uncharacterized protein LOC103488633 isoform X4 OS=Cucumis melo OX=3656 GN=LOC10... | [more] |
| A0A0A0K969 | 2.4e-51 | 73.68 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G040570 PE=4 SV=1 | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| AT4G08240.2 | 1.3e-25 | 45.93 | unknown protein; Has 33 Blast hits to 33 proteins in 12 species: Archae - 0; Bac... | [more] |
| AT4G08240.1 | 1.3e-25 | 45.93 | unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae -... | [more] |
