Sed0028054.2 (mRNA) Chayote v1

Overview


Name	Sed0028054.2
Type	mRNA
Organism	Sechium edule (Chayote v1)
Description	Histone-lysine N-methyltransferase
Location	LG03: 4868558 .. 4870527 (-)
Sequence length	1184
RNA-Seq Expression	Sed0028054.2
Synteny	Sed0028054.2

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCTAACTCAAGTGACATATTTGTGTATAAACTTGTTATTAATAAAAGATAACGAATTCAAATTTTGTTGATTTAAAAATAAAAGAAAAAAAAGAGAAAACTTGTAAAATTAAAAGAAGGGTGCAAGAAACAAATGAACAACTGACAACCGATTTAGGGCACACATTTGTGTCCGTTGTTGGAGAATTAGGTCCAGCATTGAATCGGCGAGAAAGCAAAGCCTCGGTCCGAGCGAAGATTCGTTGAATCGGAGGATTCCGATCTCTTCTCCGGTCATTTCTCCGATCGAATCCGATTTGCAGAAACACAGAGAAAGAAAGATGCGAGGAAGTGGAGGACCTCTTCTCTGCATCGGCGATCTTCTATGCGACGTCGGAGAAGAACAATCCGGCGAACGGAAGGGATCCAATCAAACCCCTAAATCTCCATCTTCTCCCTCTACTTCTCTTCCGCTCCAATCTCTTCAACCCACCGATCTCCCCAAACTCTTTCAGGTTACTATTTCCCACTCTTTTAATGCACCTTCTCTTATCGCGCTTCTCATTTCGTGTTCTATTTCAGCATAATTACCATCGGTTGAACAAAGCGTTTGATGATAACGATCACTCCTGGACAGCTTTGACATTAAAGGTACGGTGTTTCTTCATTCTATCTACCTTTTCCCTCACATACTTTGATGGGATTTCACATTTGGTTGTCAAGTTATCTATTCGTATATGCCTTCAACTGTTTGATCCTCCACGATTACTTAGTAGAGGGTCTTGCTCTCCAATTAGCAAGCAAGCCGGTAATTGGGTTTATATTTCTGTATGAAGAATATTTAGATCATACCCGAACATGATGTATAAAATATTGCCCATCTATGCAATCCAATATCGACCAAAAGATAAAAAAATAAAATAAAGAAAGATAAAATGTGGCTAGTATGACTTAAATATTTCTCTTTCTGTATACGAACTTTTTAGGTTTATGAACTATTTTGTAAAAGGGAGTAAACTATATATACTCTCTTAAAACTACTTAAATCTGTGTTTTCTTTCTCGTTTCTTTACAATTTTCTTCTGATTGTTGTTTTGATTTCTTTACAAATAATTAGATAGGGGACGATCATGAATTGTAGAGTGTTTTATGATTTACAAGGATCTTATAGCCTTTTTGCTATCTAGAAAATTGGGTTCTATTTCCTTATGACTGTATTTTGGTGGCATTTTCAGATGTGCAGTGCCCTTGACACTGCTGGTAAGTTGGTTGAATCAACCAACTCAAATTCCAGAGTTTTGTTGGACAAGGTTTTGGAGTTTGAACAGGTTTTGAAAAAGGGAGATTCTACAAGAGAGGCAGCCATGGCCATCCAAACCAGTTATAGCTCTCAAGTTGCTCAGGACTCCATTTCTTCTCAGAATCAAGGTTAGCATTTTGGCTTATACATTAAGGGCTTTTTCATAATTGAATCATGATTGAAATATTATCTTAAAATATCCTTGTTTGAGAAATTTCCATATTCATATAGCTTTGATTCATGCAATTTGTTTTCTTATGCAGTAGTTGTAGGTGAGATAAATTTGAGTTTTGATGATTTGTAACCATATGAAGTCAATAGAATAACAATGGAATGTATGGTTGGAGAGACATGGGGTTCCAAGTGTAGACAATTAGACATATCAAGGTTCCTTCAATATTGTGTTAATCTCTGGTTTCTTTTTATCTAAAACTTCGAAGTATCAATAAAAGCTTAGCCCAATTGGTATAGGTGTATGTATGGTTGTAATCAAAAGAAGTCATAAGTTCAAAATTTTCACCTCTAATTATTCTTGAACTCGAAAATTAGGGTTGATCATTATAATAGATAGATTTAATAACAGGAAATGGATGAGTATTGTAATGAAGAGGTCATGAGTTCTAAAACTTCAAATTTATGGTCAATCATTGTAATATATAGATTTGACAATACTTGGGTATTTCTCAACAGGC

mRNA sequence

TCTAACTCAAGTGACATATTTGTGTATAAACTTGTTATTAATAAAAGATAACGAATTCAAATTTTGTTGATTTAAAAATAAAAGAAAAAAAAGAGAAAACTTGTAAAATTAAAAGAAGGGTGCAAGAAACAAATGAACAACTGACAACCGATTTAGGGCACACATTTGTGTCCGTTGTTGGAGAATTAGGTCCAGCATTGAATCGGCGAGAAAGCAAAGCCTCGGTCCGAGCGAAGATTCGTTGAATCGGAGGATTCCGATCTCTTCTCCGGTCATTTCTCCGATCGAATCCGATTTGCAGAAACACAGAGAAAGAAAGATGCGAGGAAGTGGAGGACCTCTTCTCTGCATCGGCGATCTTCTATGCGACGTCGGAGAAGAACAATCCGGCGAACGGAAGGGATCCAATCAAACCCCTAAATCTCCATCTTCTCCCTCTACTTCTCTTCCGCTCCAATCTCTTCAACCCACCGATCTCCCCAAACTCTTTCAGCATAATTACCATCGGTTGAACAAAGCGTTTGATGATAACGATCACTCCTGGACAGCTTTGACATTAAAGATGTGCAGTGCCCTTGACACTGCTGGTAAGTTGGTTGAATCAACCAACTCAAATTCCAGAGTTTTGTTGGACAAGGTTTTGGAGTTTGAACAGGTTTTGAAAAAGGGAGATTCTACAAGAGAGGCAGCCATGGCCATCCAAACCAGTTATAGCTCTCAAGTTGCTCAGGACTCCATTTCTTCTCAGAATCAAGTAGTTGTAGGTGAGATAAATTTGAGTTTTGATGATTTGTAACCATATGAAGTCAATAGAATAACAATGGAATGTATGGTTGGAGAGACATGGGGTTCCAAGTGTAGACAATTAGACATATCAAGGTTCCTTCAATATTGTGTTAATCTCTGGTTTCTTTTTATCTAAAACTTCGAAGTATCAATAAAAGCTTAGCCCAATTGGTATAGGTGTATGTATGGTTGTAATCAAAAGAAGTCATAAGTTCAAAATTTTCACCTCTAATTATTCTTGAACTCGAAAATTAGGGTTGATCATTATAATAGATAGATTTAATAACAGGAAATGGATGAGTATTGTAATGAAGAGGTCATGAGTTCTAAAACTTCAAATTTATGGTCAATCATTGTAATATATAGATTTGACAATACTTGGGTATTTCTCAACAGGC

Coding sequence (CDS)

ATGCGAGGAAGTGGAGGACCTCTTCTCTGCATCGGCGATCTTCTATGCGACGTCGGAGAAGAACAATCCGGCGAACGGAAGGGATCCAATCAAACCCCTAAATCTCCATCTTCTCCCTCTACTTCTCTTCCGCTCCAATCTCTTCAACCCACCGATCTCCCCAAACTCTTTCAGCATAATTACCATCGGTTGAACAAAGCGTTTGATGATAACGATCACTCCTGGACAGCTTTGACATTAAAGATGTGCAGTGCCCTTGACACTGCTGGTAAGTTGGTTGAATCAACCAACTCAAATTCCAGAGTTTTGTTGGACAAGGTTTTGGAGTTTGAACAGGTTTTGAAAAAGGGAGATTCTACAAGAGAGGCAGCCATGGCCATCCAAACCAGTTATAGCTCTCAAGTTGCTCAGGACTCCATTTCTTCTCAGAATCAAGTAGTTGTAGGTGAGATAAATTTGAGTTTTGATGATTTGTAA

Protein sequence

MRGSGGPLLCIGDLLCDVGEEQSGERKGSNQTPKSPSSPSTSLPLQSLQPTDLPKLFQHNYHRLNKAFDDNDHSWTALTLKMCSALDTAGKLVESTNSNSRVLLDKVLEFEQVLKKGDSTREAAMAIQTSYSSQVAQDSISSQNQVVVGEINLSFDDL

Homology

[Close]

BLAST of Sed0028054.2 vs. NCBI nr
Match: XP_023516408.1 (uncharacterized protein LOC111780279 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 222.6 bits (566), Expect = 2.4e-54
Identity = 119/151 (78.81%), Postives = 132/151 (87.42%), Query Frame = 0


Query: 1   MRGSGGPLLCIGDLLCDVGEEQSGERKGSNQTPKSPSSPSTS------LPLQSLQPTDLP 60
           MRG+GGPLLCIGDLLCDVGEE++GE KGSN+TPKS  S ++S      LPL S  P DLP
Sbjct: 1   MRGTGGPLLCIGDLLCDVGEEEAGEGKGSNETPKSVISSTSSSASVSTLPLASEIP-DLP 60

Query: 61  KLFQHNYHRLNKAFDDNDHSWTALTLKMCSALDTAGKLVESTNSNSRVLLDKVLEFEQVL 120
           KLFQ NY +LNK+FDDNDHSWTALTLKMCSALDTA KLVESTNSNSR LL+K++E EQVL
Sbjct: 61  KLFQENYDQLNKSFDDNDHSWTALTLKMCSALDTASKLVESTNSNSRFLLEKIVELEQVL 120

Query: 121 KKGDSTREAAMAIQTSYSSQVAQDSISSQNQ 146
           +KGDSTREAAMAIQTS+SSQVAQDSISSQNQ
Sbjct: 121 EKGDSTREAAMAIQTSFSSQVAQDSISSQNQ 150

[Close]

BLAST of Sed0028054.2 vs. NCBI nr
Match: KAG6602083.1 (DIS3-like exonuclease 2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 221.5 bits (563), Expect = 5.2e-54
Identity = 118/151 (78.15%), Postives = 132/151 (87.42%), Query Frame = 0


Query: 1    MRGSGGPLLCIGDLLCDVGEEQSGERKGSNQTPKSPSSPSTS------LPLQSLQPTDLP 60
            MRG+GGPLLCIGDLLCDVGEE++GE KGSN+TPKS  S ++S      LPL S  P DLP
Sbjct: 1007 MRGTGGPLLCIGDLLCDVGEEEAGEGKGSNETPKSVISSTSSSASVSTLPLVSETP-DLP 1066

Query: 61   KLFQHNYHRLNKAFDDNDHSWTALTLKMCSALDTAGKLVESTNSNSRVLLDKVLEFEQVL 120
            KLFQ NY +LNK+FDDNDHSWTALTLKMCSALDTA KLVESTNSNSR LL+K++E EQVL
Sbjct: 1067 KLFQENYDQLNKSFDDNDHSWTALTLKMCSALDTASKLVESTNSNSRFLLEKIVELEQVL 1126

Query: 121  KKGDSTREAAMAIQTSYSSQVAQDSISSQNQ 146
            +KGDSTREAAMAIQTS+SSQVAQDSISS+NQ
Sbjct: 1127 EKGDSTREAAMAIQTSFSSQVAQDSISSRNQ 1156

[Close]

BLAST of Sed0028054.2 vs. NCBI nr
Match: KAG7032788.1 (hypothetical protein SDJN02_06838 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 221.5 bits (563), Expect = 5.2e-54
Identity = 118/151 (78.15%), Postives = 132/151 (87.42%), Query Frame = 0


Query: 1   MRGSGGPLLCIGDLLCDVGEEQSGERKGSNQTPKSPSSPSTS------LPLQSLQPTDLP 60
           MRG+GGPLLCIGDLLCDVGEE++GE KGSN+TPKS  S ++S      LPL S  P DLP
Sbjct: 1   MRGTGGPLLCIGDLLCDVGEEEAGEGKGSNETPKSVISSTSSSASVSTLPLVSETP-DLP 60

Query: 61  KLFQHNYHRLNKAFDDNDHSWTALTLKMCSALDTAGKLVESTNSNSRVLLDKVLEFEQVL 120
           KLFQ NY +LNK+FDDNDHSWTALTLKMCSALDTA KLVESTNSNSR LL+K++E EQVL
Sbjct: 61  KLFQENYDQLNKSFDDNDHSWTALTLKMCSALDTASKLVESTNSNSRFLLEKIVELEQVL 120

Query: 121 KKGDSTREAAMAIQTSYSSQVAQDSISSQNQ 146
           +KGDSTREAAMAIQTS+SSQVAQDSISS+NQ
Sbjct: 121 EKGDSTREAAMAIQTSFSSQVAQDSISSRNQ 150

[Close]

BLAST of Sed0028054.2 vs. NCBI nr
Match: XP_022964546.1 (uncharacterized protein LOC111464539 [Cucurbita moschata])

HSP 1 Score: 221.1 bits (562), Expect = 6.8e-54
Identity = 118/151 (78.15%), Postives = 132/151 (87.42%), Query Frame = 0


Query: 1   MRGSGGPLLCIGDLLCDVGEEQSGERKGSNQTPKSPSSPSTS------LPLQSLQPTDLP 60
           MRG+GGPLLCIGDLLCDVGEE++GE KGSN+TPKS  S ++S      LPL S  P DLP
Sbjct: 1   MRGTGGPLLCIGDLLCDVGEEEAGEGKGSNETPKSVISSTSSSASVSTLPLVSETP-DLP 60

Query: 61  KLFQHNYHRLNKAFDDNDHSWTALTLKMCSALDTAGKLVESTNSNSRVLLDKVLEFEQVL 120
           KLFQ NY +LNK+FDDNDHSWTALTLKMCSALDTA KLVESTNSNSR LL+K++E EQVL
Sbjct: 61  KLFQENYDQLNKSFDDNDHSWTALTLKMCSALDTASKLVESTNSNSRFLLEKIVELEQVL 120

Query: 121 KKGDSTREAAMAIQTSYSSQVAQDSISSQNQ 146
           +KGDSTREAAMAIQTS+SSQVAQDSISSQ+Q
Sbjct: 121 EKGDSTREAAMAIQTSFSSQVAQDSISSQSQ 150

[Close]

BLAST of Sed0028054.2 vs. NCBI nr
Match: XP_022989818.1 (uncharacterized protein LOC111486891 [Cucurbita maxima])

HSP 1 Score: 218.4 bits (555), Expect = 4.4e-53
Identity = 115/151 (76.16%), Postives = 131/151 (86.75%), Query Frame = 0


Query: 1   MRGSGGPLLCIGDLLCDVGEEQSGERKGSNQTPKSPSSPSTS------LPLQSLQPTDLP 60
           MRG+GGPLLCIGDLLCDVGEE++GE KGSN+TPKS  S ++S      LP+ S  P DLP
Sbjct: 1   MRGTGGPLLCIGDLLCDVGEEEAGEGKGSNETPKSVISSTSSSASVSTLPVVSETP-DLP 60

Query: 61  KLFQHNYHRLNKAFDDNDHSWTALTLKMCSALDTAGKLVESTNSNSRVLLDKVLEFEQVL 120
           KLFQ NY +LNK+FDDNDHSWTALTLKMCSALDTA KLVESTNSNSR LL+K++E EQ+L
Sbjct: 61  KLFQENYDQLNKSFDDNDHSWTALTLKMCSALDTASKLVESTNSNSRFLLEKIVELEQIL 120

Query: 121 KKGDSTREAAMAIQTSYSSQVAQDSISSQNQ 146
           +KGDSTREAAMAIQTS+SSQV QDSISS+NQ
Sbjct: 121 EKGDSTREAAMAIQTSFSSQVTQDSISSRNQ 150

[Close]

BLAST of Sed0028054.2 vs. ExPASy TrEMBL
Match: A0A6J1HJ70 (uncharacterized protein LOC111464539 OS=Cucurbita moschata OX=3662 GN=LOC111464539 PE=4 SV=1)

HSP 1 Score: 221.1 bits (562), Expect = 3.3e-54
Identity = 118/151 (78.15%), Postives = 132/151 (87.42%), Query Frame = 0


Query: 1   MRGSGGPLLCIGDLLCDVGEEQSGERKGSNQTPKSPSSPSTS------LPLQSLQPTDLP 60
           MRG+GGPLLCIGDLLCDVGEE++GE KGSN+TPKS  S ++S      LPL S  P DLP
Sbjct: 1   MRGTGGPLLCIGDLLCDVGEEEAGEGKGSNETPKSVISSTSSSASVSTLPLVSETP-DLP 60

Query: 61  KLFQHNYHRLNKAFDDNDHSWTALTLKMCSALDTAGKLVESTNSNSRVLLDKVLEFEQVL 120
           KLFQ NY +LNK+FDDNDHSWTALTLKMCSALDTA KLVESTNSNSR LL+K++E EQVL
Sbjct: 61  KLFQENYDQLNKSFDDNDHSWTALTLKMCSALDTASKLVESTNSNSRFLLEKIVELEQVL 120

Query: 121 KKGDSTREAAMAIQTSYSSQVAQDSISSQNQ 146
           +KGDSTREAAMAIQTS+SSQVAQDSISSQ+Q
Sbjct: 121 EKGDSTREAAMAIQTSFSSQVAQDSISSQSQ 150

[Close]

BLAST of Sed0028054.2 vs. ExPASy TrEMBL
Match: A0A6J1JRF3 (uncharacterized protein LOC111486891 OS=Cucurbita maxima OX=3661 GN=LOC111486891 PE=4 SV=1)

HSP 1 Score: 218.4 bits (555), Expect = 2.1e-53
Identity = 115/151 (76.16%), Postives = 131/151 (86.75%), Query Frame = 0


Query: 1   MRGSGGPLLCIGDLLCDVGEEQSGERKGSNQTPKSPSSPSTS------LPLQSLQPTDLP 60
           MRG+GGPLLCIGDLLCDVGEE++GE KGSN+TPKS  S ++S      LP+ S  P DLP
Sbjct: 1   MRGTGGPLLCIGDLLCDVGEEEAGEGKGSNETPKSVISSTSSSASVSTLPVVSETP-DLP 60

Query: 61  KLFQHNYHRLNKAFDDNDHSWTALTLKMCSALDTAGKLVESTNSNSRVLLDKVLEFEQVL 120
           KLFQ NY +LNK+FDDNDHSWTALTLKMCSALDTA KLVESTNSNSR LL+K++E EQ+L
Sbjct: 61  KLFQENYDQLNKSFDDNDHSWTALTLKMCSALDTASKLVESTNSNSRFLLEKIVELEQIL 120

Query: 121 KKGDSTREAAMAIQTSYSSQVAQDSISSQNQ 146
           +KGDSTREAAMAIQTS+SSQV QDSISS+NQ
Sbjct: 121 EKGDSTREAAMAIQTSFSSQVTQDSISSRNQ 150

[Close]

BLAST of Sed0028054.2 vs. ExPASy TrEMBL
Match: A0A1S3BCT2 (uncharacterized protein LOC103488633 isoform X5 OS=Cucumis melo OX=3656 GN=LOC103488633 PE=4 SV=1)

HSP 1 Score: 214.2 bits (544), Expect = 4.1e-52
Identity = 113/152 (74.34%), Postives = 127/152 (83.55%), Query Frame = 0


Query: 1   MRGSGGPLLCIGDLLCDVGEEQSGERKGSNQTPKSPSSPSTSLPLQSL------QPTDLP 60
           MRG+GGPLLCIGDLLCDVGEE++ E KG N+TPKS  SPS+S    S       QP DLP
Sbjct: 1   MRGTGGPLLCIGDLLCDVGEEEAVEGKGLNETPKSIPSPSSSSSSVSTTLFDLSQPPDLP 60

Query: 61  KLFQHNYHRLNKAFDDNDHSWTALTLKMCSALDTAGKLVESTNSNSRVLLDKVLEFEQVL 120
           +LFQ NY +LNK FDDNDHSWTALTLKMCSALDTA KLVESTNSNSR LL+K++E E VL
Sbjct: 61  QLFQENYDQLNKVFDDNDHSWTALTLKMCSALDTATKLVESTNSNSRFLLEKIVELEHVL 120

Query: 121 KKGDSTREAAMAIQTSYSSQVAQDSISSQNQV 147
           +KGD+TREAAMAIQTSYSSQ+AQDSISS N+V
Sbjct: 121 EKGDATREAAMAIQTSYSSQIAQDSISSLNEV 152

[Close]

BLAST of Sed0028054.2 vs. ExPASy TrEMBL
Match: A0A1S4DVZ1 (uncharacterized protein LOC103488633 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103488633 PE=4 SV=1)

HSP 1 Score: 214.2 bits (544), Expect = 4.1e-52
Identity = 113/152 (74.34%), Postives = 127/152 (83.55%), Query Frame = 0


Query: 1   MRGSGGPLLCIGDLLCDVGEEQSGERKGSNQTPKSPSSPSTSLPLQSL------QPTDLP 60
           MRG+GGPLLCIGDLLCDVGEE++ E KG N+TPKS  SPS+S    S       QP DLP
Sbjct: 1   MRGTGGPLLCIGDLLCDVGEEEAVEGKGLNETPKSIPSPSSSSSSVSTTLFDLSQPPDLP 60

Query: 61  KLFQHNYHRLNKAFDDNDHSWTALTLKMCSALDTAGKLVESTNSNSRVLLDKVLEFEQVL 120
           +LFQ NY +LNK FDDNDHSWTALTLKMCSALDTA KLVESTNSNSR LL+K++E E VL
Sbjct: 61  QLFQENYDQLNKVFDDNDHSWTALTLKMCSALDTATKLVESTNSNSRFLLEKIVELEHVL 120

Query: 121 KKGDSTREAAMAIQTSYSSQVAQDSISSQNQV 147
           +KGD+TREAAMAIQTSYSSQ+AQDSISS N+V
Sbjct: 121 EKGDATREAAMAIQTSYSSQIAQDSISSLNEV 152

[Close]

BLAST of Sed0028054.2 vs. ExPASy TrEMBL
Match: A0A1S3BDA2 (uncharacterized protein LOC103488633 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103488633 PE=4 SV=1)

HSP 1 Score: 214.2 bits (544), Expect = 4.1e-52
Identity = 113/152 (74.34%), Postives = 127/152 (83.55%), Query Frame = 0


Query: 1   MRGSGGPLLCIGDLLCDVGEEQSGERKGSNQTPKSPSSPSTSLPLQSL------QPTDLP 60
           MRG+GGPLLCIGDLLCDVGEE++ E KG N+TPKS  SPS+S    S       QP DLP
Sbjct: 1   MRGTGGPLLCIGDLLCDVGEEEAVEGKGLNETPKSIPSPSSSSSSVSTTLFDLSQPPDLP 60

Query: 61  KLFQHNYHRLNKAFDDNDHSWTALTLKMCSALDTAGKLVESTNSNSRVLLDKVLEFEQVL 120
           +LFQ NY +LNK FDDNDHSWTALTLKMCSALDTA KLVESTNSNSR LL+K++E E VL
Sbjct: 61  QLFQENYDQLNKVFDDNDHSWTALTLKMCSALDTATKLVESTNSNSRFLLEKIVELEHVL 120

Query: 121 KKGDSTREAAMAIQTSYSSQVAQDSISSQNQV 147
           +KGD+TREAAMAIQTSYSSQ+AQDSISS N+V
Sbjct: 121 EKGDATREAAMAIQTSYSSQIAQDSISSLNEV 152

[Close]

BLAST of Sed0028054.2 vs. TAIR 10
Match: AT4G08240.2 (unknown protein; Has 33 Blast hits to 33 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 33; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 114.0 bits (284), Expect = 1.1e-25
Identity = 62/135 (45.93%), Postives = 89/135 (65.93%), Query Frame = 0


Query: 1   MRGSGGPLLCIGDLLCDVGEEQSGERKGSNQTPKSPSSPSTSLPLQSLQ-PTDLPKLFQH 60
           MRG GGPLL IGDLL D+G+E       S Q   +P   S S    ++  P DL +LFQ 
Sbjct: 1   MRGVGGPLLSIGDLLADLGDETG----HSPQNHPNPEVSSKSYSDDTISGPLDLTRLFQE 60

Query: 61  NYHRLNKAFDDNDHSWTALTLKMCSALDTAGKLVESTNSNSRVLLDKVLEFEQVLKKGDS 120
           NY +LN AF  +DHSWT+LTL++C++L+TA KLV +T +N+R+L +KV E E+++K+GDS
Sbjct: 61  NYDKLNDAFAGSDHSWTSLTLELCTSLETANKLVHATTTNARLLSEKVEELEKIVKRGDS 120

Query: 121 TREAAMAIQTSYSSQ 135
              AA  +  + + +
Sbjct: 121 AVAAARTVHATVNQK 131

[Close]

BLAST of Sed0028054.2 vs. TAIR 10
Match: AT4G08240.1 (unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 114.0 bits (284), Expect = 1.1e-25
Identity = 62/135 (45.93%), Postives = 89/135 (65.93%), Query Frame = 0


Query: 1   MRGSGGPLLCIGDLLCDVGEEQSGERKGSNQTPKSPSSPSTSLPLQSLQ-PTDLPKLFQH 60
           MRG GGPLL IGDLL D+G+E       S Q   +P   S S    ++  P DL +LFQ 
Sbjct: 1   MRGVGGPLLSIGDLLADLGDETG----HSPQNHPNPEVSSKSYSDDTISGPLDLTRLFQE 60

Query: 61  NYHRLNKAFDDNDHSWTALTLKMCSALDTAGKLVESTNSNSRVLLDKVLEFEQVLKKGDS 120
           NY +LN AF  +DHSWT+LTL++C++L+TA KLV +T +N+R+L +KV E E+++K+GDS
Sbjct: 61  NYDKLNDAFAGSDHSWTSLTLELCTSLETANKLVHATTTNARLLSEKVEELEKIVKRGDS 120

Query: 121 TREAAMAIQTSYSSQ 135
              AA  +  + + +
Sbjct: 121 AVAAARTVHATVNQK 131

The following BLAST results are available for this feature:

BLAST of Sed0028054.2 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023516408.1	2.4e-54	78.81	uncharacterized protein LOC111780279 [Cucurbita pepo subsp. pepo]	[more]
KAG6602083.1	5.2e-54	78.15	DIS3-like exonuclease 2, partial [Cucurbita argyrosperma subsp. sororia]	[more]
KAG7032788.1	5.2e-54	78.15	hypothetical protein SDJN02_06838 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022964546.1	6.8e-54	78.15	uncharacterized protein LOC111464539 [Cucurbita moschata]	[more]
XP_022989818.1	4.4e-53	76.16	uncharacterized protein LOC111486891 [Cucurbita maxima]	[more]

BLAST of Sed0028054.2 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Sed0028054.2 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HJ70	3.3e-54	78.15	uncharacterized protein LOC111464539 OS=Cucurbita moschata OX=3662 GN=LOC1114645...	[more]
A0A6J1JRF3	2.1e-53	76.16	uncharacterized protein LOC111486891 OS=Cucurbita maxima OX=3661 GN=LOC111486891...	[more]
A0A1S3BCT2	4.1e-52	74.34	uncharacterized protein LOC103488633 isoform X5 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A1S4DVZ1	4.1e-52	74.34	uncharacterized protein LOC103488633 isoform X3 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A1S3BDA2	4.1e-52	74.34	uncharacterized protein LOC103488633 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10...	[more]

BLAST of Sed0028054.2 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G08240.2	1.1e-25	45.93	unknown protein; Has 33 Blast hits to 33 proteins in 12 species: Archae - 0; Bac...	[more]
AT4G08240.1	1.1e-25	45.93	unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae -...	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 25..48
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 21..48
None	No IPR available	PANTHER	PTHR37237	OS02G0567000 PROTEIN	coord: 1..143

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Sed0028054	Sed0028054	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0028054.2-exon	Sed0028054.2-exon-LG03:4868558..4868986	exon
Sed0028054.2-exon	Sed0028054.2-exon-LG03:4869122..4869314	exon
Sed0028054.2-exon	Sed0028054.2-exon-LG03:4869899..4869967	exon
Sed0028054.2-exon	Sed0028054.2-exon-LG03:4870035..4870527	exon

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0028054.2-three_prime_utr	Sed0028054.2-three_prime_utr-LG03:4868558..4868945	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0028054.2-cds	Sed0028054.2-cds-LG03:4868946..4868986	CDS
Sed0028054.2-cds	Sed0028054.2-cds-LG03:4869122..4869314	CDS
Sed0028054.2-cds	Sed0028054.2-cds-LG03:4869899..4869967	CDS
Sed0028054.2-cds	Sed0028054.2-cds-LG03:4870035..4870208	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0028054.2-five_prime_utr	Sed0028054.2-five_prime_utr-LG03:4870209..4870527	five_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Sed0028054.2	Sed0028054.2-protein	polypeptide