Sed0028054.1 (mRNA) Chayote v1

Overview


Name	Sed0028054.1
Type	mRNA
Organism	Sechium edule (Chayote v1)
Description	Histone-lysine N-methyltransferase
Location	LG03: 4868558 .. 4870527 (-)
Sequence length	1319
RNA-Seq Expression	Sed0028054.1
Synteny	Sed0028054.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCTAACTCAAGTGACATATTTGTGTATAAACTTGTTATTAATAAAAGATAACGAATTCAAATTTTGTTGATTTAAAAATAAAAGAAAAAAAAGAGAAAACTTGTAAAATTAAAAGAAGGGTGCAAGAAACAAATGAACAACTGACAACCGATTTAGGGCACACATTTGTGTCCGTTGTTGGAGAATTAGGTCCAGCATTGAATCGGCGAGAAAGCAAAGCCTCGGTCCGAGCGAAGATTCGTTGAATCGGAGGATTCCGATCTCTTCTCCGGTCATTTCTCCGATCGAATCCGATTTGCAGAAACACAGAGAAAGAAAGATGCGAGGAAGTGGAGGACCTCTTCTCTGCATCGGCGATCTTCTATGCGACGTCGGAGAAGAACAATCCGGCGAACGGAAGGGATCCAATCAAACCCCTAAATCTCCATCTTCTCCCTCTACTTCTCTTCCGCTCCAATCTCTTCAACCCACCGATCTCCCCAAACTCTTTCAGGTTACTATTTCCCACTCTTTTAATGCACCTTCTCTTATCGCGCTTCTCATTTCGTGTTCTATTTCAGCATAATTACCATCGGTTGAACAAAGCGTTTGATGATAACGATCACTCCTGGACAGCTTTGACATTAAAGGTACGGTGTTTCTTCATTCTATCTACCTTTTCCCTCACATACTTTGATGGGATTTCACATTTGGTTGTCAAGTTATCTATTCGTATATGCCTTCAACTGTTTGATCCTCCACGATTACTTAGTAGAGGGTCTTGCTCTCCAATTAGCAAGCAAGCCGGTAATTGGGTTTATATTTCTGTATGAAGAATATTTAGATCATACCCGAACATGATGTATAAAATATTGCCCATCTATGCAATCCAATATCGACCAAAAGATAAAAAAATAAAATAAAGAAAGATAAAATGTGGCTAGTATGACTTAAATATTTCTCTTTCTGTATACGAACTTTTTAGGTTTATGAACTATTTTGTAAAAGGGAGTAAACTATATATACTCTCTTAAAACTACTTAAATCTGTGTTTTCTTTCTCGTTTCTTTACAATTTTCTTCTGATTGTTGTTTTGATTTCTTTACAAATAATTAGATAGGGGACGATCATGAATTGTAGAGTGTTTTATGATTTACAAGGATCTTATAGCCTTTTTGCTATCTAGAAAATTGGGTTCTATTTCCTTATGACTGTATTTTGGTGGCATTTTCAGATGTGCAGTGCCCTTGACACTGCTGGTAAGTTGGTTGAATCAACCAACTCAAATTCCAGAGTTTTGTTGGACAAGGTTTTGGAGTTTGAACAGGTTTTGAAAAAGGGAGATTCTACAAGAGAGGCAGCCATGGCCATCCAAACCAGTTATAGCTCTCAAGTTGCTCAGGACTCCATTTCTTCTCAGAATCAAGGTTAGCATTTTGGCTTATACATTAAGGGCTTTTTCATAATTGAATCATGATTGAAATATTATCTTAAAATATCCTTGTTTGAGAAATTTCCATATTCATATAGCTTTGATTCATGCAATTTGTTTTCTTATGCAGTAGTTGTAGGTGAGATAAATTTGAGTTTTGATGATTTGTAACCATATGAAGTCAATAGAATAACAATGGAATGTATGGTTGGAGAGACATGGGGTTCCAAGTGTAGACAATTAGACATATCAAGGTTCCTTCAATATTGTGTTAATCTCTGGTTTCTTTTTATCTAAAACTTCGAAGTATCAATAAAAGCTTAGCCCAATTGGTATAGGTGTATGTATGGTTGTAATCAAAAGAAGTCATAAGTTCAAAATTTTCACCTCTAATTATTCTTGAACTCGAAAATTAGGGTTGATCATTATAATAGATAGATTTAATAACAGGAAATGGATGAGTATTGTAATGAAGAGGTCATGAGTTCTAAAACTTCAAATTTATGGTCAATCATTGTAATATATAGATTTGACAATACTTGGGTATTTCTCAACAGGC

mRNA sequence

TCTAACTCAAGTGACATATTTGTGTATAAACTTGTTATTAATAAAAGATAACGAATTCAAATTTTGTTGATTTAAAAATAAAAGAAAAAAAAGAGAAAACTTGTAAAATTAAAAGAAGGGTGCAAGAAACAAATGAACAACTGACAACCGATTTAGGGCACACATTTGTGTCCGTTGTTGGAGAATTAGGTCCAGCATTGAATCGGCGAGAAAGCAAAGCCTCGGTCCGAGCGAAGATTCGTTGAATCGGAGGATTCCGATCTCTTCTCCGGTCATTTCTCCGATCGAATCCGATTTGCAGAAACACAGAGAAAGAAAGATGCGAGGAAGTGGAGGACCTCTTCTCTGCATCGGCGATCTTCTATGCGACGTCGGAGAAGAACAATCCGGCGAACGGAAGGGATCCAATCAAACCCCTAAATCTCCATCTTCTCCCTCTACTTCTCTTCCGCTCCAATCTCTTCAACCCACCGATCTCCCCAAACTCTTTCAGCATAATTACCATCGGTTGAACAAAGCGTTTGATGATAACGATCACTCCTGGACAGCTTTGACATTAAAGATGTGCAGTGCCCTTGACACTGCTGGTAAGTTGGTTGAATCAACCAACTCAAATTCCAGAGTTTTGTTGGACAAGGTTTTGGAGTTTGAACAGGTTTTGAAAAAGGGAGATTCTACAAGAGAGGCAGCCATGGCCATCCAAACCAGTTATAGCTCTCAAGTTGCTCAGGACTCCATTTCTTCTCAGAATCAAGGTTAGCATTTTGGCTTATACATTAAGGGCTTTTTCATAATTGAATCATGATTGAAATATTATCTTAAAATATCCTTGTTTGAGAAATTTCCATATTCATATAGCTTTGATTCATGCAATTTGTTTTCTTATGCAGTAGTTGTAGGTGAGATAAATTTGAGTTTTGATGATTTGTAACCATATGAAGTCAATAGAATAACAATGGAATGTATGGTTGGAGAGACATGGGGTTCCAAGTGTAGACAATTAGACATATCAAGGTTCCTTCAATATTGTGTTAATCTCTGGTTTCTTTTTATCTAAAACTTCGAAGTATCAATAAAAGCTTAGCCCAATTGGTATAGGTGTATGTATGGTTGTAATCAAAAGAAGTCATAAGTTCAAAATTTTCACCTCTAATTATTCTTGAACTCGAAAATTAGGGTTGATCATTATAATAGATAGATTTAATAACAGGAAATGGATGAGTATTGTAATGAAGAGGTCATGAGTTCTAAAACTTCAAATTTATGGTCAATCATTGTAATATATAGATTTGACAATACTTGGGTATTTCTCAACAGGC

Coding sequence (CDS)

ATGCGAGGAAGTGGAGGACCTCTTCTCTGCATCGGCGATCTTCTATGCGACGTCGGAGAAGAACAATCCGGCGAACGGAAGGGATCCAATCAAACCCCTAAATCTCCATCTTCTCCCTCTACTTCTCTTCCGCTCCAATCTCTTCAACCCACCGATCTCCCCAAACTCTTTCAGCATAATTACCATCGGTTGAACAAAGCGTTTGATGATAACGATCACTCCTGGACAGCTTTGACATTAAAGATGTGCAGTGCCCTTGACACTGCTGGTAAGTTGGTTGAATCAACCAACTCAAATTCCAGAGTTTTGTTGGACAAGGTTTTGGAGTTTGAACAGGTTTTGAAAAAGGGAGATTCTACAAGAGAGGCAGCCATGGCCATCCAAACCAGTTATAGCTCTCAAGTTGCTCAGGACTCCATTTCTTCTCAGAATCAAGGTTAG

Protein sequence

MRGSGGPLLCIGDLLCDVGEEQSGERKGSNQTPKSPSSPSTSLPLQSLQPTDLPKLFQHNYHRLNKAFDDNDHSWTALTLKMCSALDTAGKLVESTNSNSRVLLDKVLEFEQVLKKGDSTREAAMAIQTSYSSQVAQDSISSQNQG

Homology

[Close]

BLAST of Sed0028054.1 vs. NCBI nr
Match: XP_023516408.1 (uncharacterized protein LOC111780279 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 223.8 bits (569), Expect = 9.8e-55
Identity = 120/152 (78.95%), Postives = 133/152 (87.50%), Query Frame = 0


Query: 1   MRGSGGPLLCIGDLLCDVGEEQSGERKGSNQTPKSPSSPSTS------LPLQSLQPTDLP 60
           MRG+GGPLLCIGDLLCDVGEE++GE KGSN+TPKS  S ++S      LPL S  P DLP
Sbjct: 1   MRGTGGPLLCIGDLLCDVGEEEAGEGKGSNETPKSVISSTSSSASVSTLPLASEIP-DLP 60

Query: 61  KLFQHNYHRLNKAFDDNDHSWTALTLKMCSALDTAGKLVESTNSNSRVLLDKVLEFEQVL 120
           KLFQ NY +LNK+FDDNDHSWTALTLKMCSALDTA KLVESTNSNSR LL+K++E EQVL
Sbjct: 61  KLFQENYDQLNKSFDDNDHSWTALTLKMCSALDTASKLVESTNSNSRFLLEKIVELEQVL 120

Query: 121 KKGDSTREAAMAIQTSYSSQVAQDSISSQNQG 147
           +KGDSTREAAMAIQTS+SSQVAQDSISSQNQG
Sbjct: 121 EKGDSTREAAMAIQTSFSSQVAQDSISSQNQG 151

[Close]

BLAST of Sed0028054.1 vs. NCBI nr
Match: KAG6602083.1 (DIS3-like exonuclease 2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 222.6 bits (566), Expect = 2.2e-54
Identity = 119/152 (78.29%), Postives = 133/152 (87.50%), Query Frame = 0


Query: 1    MRGSGGPLLCIGDLLCDVGEEQSGERKGSNQTPKSPSSPSTS------LPLQSLQPTDLP 60
            MRG+GGPLLCIGDLLCDVGEE++GE KGSN+TPKS  S ++S      LPL S  P DLP
Sbjct: 1007 MRGTGGPLLCIGDLLCDVGEEEAGEGKGSNETPKSVISSTSSSASVSTLPLVSETP-DLP 1066

Query: 61   KLFQHNYHRLNKAFDDNDHSWTALTLKMCSALDTAGKLVESTNSNSRVLLDKVLEFEQVL 120
            KLFQ NY +LNK+FDDNDHSWTALTLKMCSALDTA KLVESTNSNSR LL+K++E EQVL
Sbjct: 1067 KLFQENYDQLNKSFDDNDHSWTALTLKMCSALDTASKLVESTNSNSRFLLEKIVELEQVL 1126

Query: 121  KKGDSTREAAMAIQTSYSSQVAQDSISSQNQG 147
            +KGDSTREAAMAIQTS+SSQVAQDSISS+NQG
Sbjct: 1127 EKGDSTREAAMAIQTSFSSQVAQDSISSRNQG 1157

[Close]

BLAST of Sed0028054.1 vs. NCBI nr
Match: KAG7032788.1 (hypothetical protein SDJN02_06838 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 222.6 bits (566), Expect = 2.2e-54
Identity = 119/152 (78.29%), Postives = 133/152 (87.50%), Query Frame = 0


Query: 1   MRGSGGPLLCIGDLLCDVGEEQSGERKGSNQTPKSPSSPSTS------LPLQSLQPTDLP 60
           MRG+GGPLLCIGDLLCDVGEE++GE KGSN+TPKS  S ++S      LPL S  P DLP
Sbjct: 1   MRGTGGPLLCIGDLLCDVGEEEAGEGKGSNETPKSVISSTSSSASVSTLPLVSETP-DLP 60

Query: 61  KLFQHNYHRLNKAFDDNDHSWTALTLKMCSALDTAGKLVESTNSNSRVLLDKVLEFEQVL 120
           KLFQ NY +LNK+FDDNDHSWTALTLKMCSALDTA KLVESTNSNSR LL+K++E EQVL
Sbjct: 61  KLFQENYDQLNKSFDDNDHSWTALTLKMCSALDTASKLVESTNSNSRFLLEKIVELEQVL 120

Query: 121 KKGDSTREAAMAIQTSYSSQVAQDSISSQNQG 147
           +KGDSTREAAMAIQTS+SSQVAQDSISS+NQG
Sbjct: 121 EKGDSTREAAMAIQTSFSSQVAQDSISSRNQG 151

[Close]

BLAST of Sed0028054.1 vs. NCBI nr
Match: XP_022964546.1 (uncharacterized protein LOC111464539 [Cucurbita moschata])

HSP 1 Score: 222.2 bits (565), Expect = 2.8e-54
Identity = 119/152 (78.29%), Postives = 133/152 (87.50%), Query Frame = 0


Query: 1   MRGSGGPLLCIGDLLCDVGEEQSGERKGSNQTPKSPSSPSTS------LPLQSLQPTDLP 60
           MRG+GGPLLCIGDLLCDVGEE++GE KGSN+TPKS  S ++S      LPL S  P DLP
Sbjct: 1   MRGTGGPLLCIGDLLCDVGEEEAGEGKGSNETPKSVISSTSSSASVSTLPLVSETP-DLP 60

Query: 61  KLFQHNYHRLNKAFDDNDHSWTALTLKMCSALDTAGKLVESTNSNSRVLLDKVLEFEQVL 120
           KLFQ NY +LNK+FDDNDHSWTALTLKMCSALDTA KLVESTNSNSR LL+K++E EQVL
Sbjct: 61  KLFQENYDQLNKSFDDNDHSWTALTLKMCSALDTASKLVESTNSNSRFLLEKIVELEQVL 120

Query: 121 KKGDSTREAAMAIQTSYSSQVAQDSISSQNQG 147
           +KGDSTREAAMAIQTS+SSQVAQDSISSQ+QG
Sbjct: 121 EKGDSTREAAMAIQTSFSSQVAQDSISSQSQG 151

[Close]

BLAST of Sed0028054.1 vs. NCBI nr
Match: XP_022989818.1 (uncharacterized protein LOC111486891 [Cucurbita maxima])

HSP 1 Score: 219.5 bits (558), Expect = 1.8e-53
Identity = 116/152 (76.32%), Postives = 132/152 (86.84%), Query Frame = 0


Query: 1   MRGSGGPLLCIGDLLCDVGEEQSGERKGSNQTPKSPSSPSTS------LPLQSLQPTDLP 60
           MRG+GGPLLCIGDLLCDVGEE++GE KGSN+TPKS  S ++S      LP+ S  P DLP
Sbjct: 1   MRGTGGPLLCIGDLLCDVGEEEAGEGKGSNETPKSVISSTSSSASVSTLPVVSETP-DLP 60

Query: 61  KLFQHNYHRLNKAFDDNDHSWTALTLKMCSALDTAGKLVESTNSNSRVLLDKVLEFEQVL 120
           KLFQ NY +LNK+FDDNDHSWTALTLKMCSALDTA KLVESTNSNSR LL+K++E EQ+L
Sbjct: 61  KLFQENYDQLNKSFDDNDHSWTALTLKMCSALDTASKLVESTNSNSRFLLEKIVELEQIL 120

Query: 121 KKGDSTREAAMAIQTSYSSQVAQDSISSQNQG 147
           +KGDSTREAAMAIQTS+SSQV QDSISS+NQG
Sbjct: 121 EKGDSTREAAMAIQTSFSSQVTQDSISSRNQG 151

[Close]

BLAST of Sed0028054.1 vs. ExPASy TrEMBL
Match: A0A6J1HJ70 (uncharacterized protein LOC111464539 OS=Cucurbita moschata OX=3662 GN=LOC111464539 PE=4 SV=1)

HSP 1 Score: 222.2 bits (565), Expect = 1.4e-54
Identity = 119/152 (78.29%), Postives = 133/152 (87.50%), Query Frame = 0


Query: 1   MRGSGGPLLCIGDLLCDVGEEQSGERKGSNQTPKSPSSPSTS------LPLQSLQPTDLP 60
           MRG+GGPLLCIGDLLCDVGEE++GE KGSN+TPKS  S ++S      LPL S  P DLP
Sbjct: 1   MRGTGGPLLCIGDLLCDVGEEEAGEGKGSNETPKSVISSTSSSASVSTLPLVSETP-DLP 60

Query: 61  KLFQHNYHRLNKAFDDNDHSWTALTLKMCSALDTAGKLVESTNSNSRVLLDKVLEFEQVL 120
           KLFQ NY +LNK+FDDNDHSWTALTLKMCSALDTA KLVESTNSNSR LL+K++E EQVL
Sbjct: 61  KLFQENYDQLNKSFDDNDHSWTALTLKMCSALDTASKLVESTNSNSRFLLEKIVELEQVL 120

Query: 121 KKGDSTREAAMAIQTSYSSQVAQDSISSQNQG 147
           +KGDSTREAAMAIQTS+SSQVAQDSISSQ+QG
Sbjct: 121 EKGDSTREAAMAIQTSFSSQVAQDSISSQSQG 151

[Close]

BLAST of Sed0028054.1 vs. ExPASy TrEMBL
Match: A0A6J1JRF3 (uncharacterized protein LOC111486891 OS=Cucurbita maxima OX=3661 GN=LOC111486891 PE=4 SV=1)

HSP 1 Score: 219.5 bits (558), Expect = 8.9e-54
Identity = 116/152 (76.32%), Postives = 132/152 (86.84%), Query Frame = 0


Query: 1   MRGSGGPLLCIGDLLCDVGEEQSGERKGSNQTPKSPSSPSTS------LPLQSLQPTDLP 60
           MRG+GGPLLCIGDLLCDVGEE++GE KGSN+TPKS  S ++S      LP+ S  P DLP
Sbjct: 1   MRGTGGPLLCIGDLLCDVGEEEAGEGKGSNETPKSVISSTSSSASVSTLPVVSETP-DLP 60

Query: 61  KLFQHNYHRLNKAFDDNDHSWTALTLKMCSALDTAGKLVESTNSNSRVLLDKVLEFEQVL 120
           KLFQ NY +LNK+FDDNDHSWTALTLKMCSALDTA KLVESTNSNSR LL+K++E EQ+L
Sbjct: 61  KLFQENYDQLNKSFDDNDHSWTALTLKMCSALDTASKLVESTNSNSRFLLEKIVELEQIL 120

Query: 121 KKGDSTREAAMAIQTSYSSQVAQDSISSQNQG 147
           +KGDSTREAAMAIQTS+SSQV QDSISS+NQG
Sbjct: 121 EKGDSTREAAMAIQTSFSSQVTQDSISSRNQG 151

[Close]

BLAST of Sed0028054.1 vs. ExPASy TrEMBL
Match: A0A5D3BZV1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1415G00780 PE=4 SV=1)

HSP 1 Score: 213.8 bits (543), Expect = 4.9e-52
Identity = 113/152 (74.34%), Postives = 127/152 (83.55%), Query Frame = 0


Query: 1   MRGSGGPLLCIGDLLCDVGEEQSGERKGSNQTPKSPSSPSTSLPLQSL------QPTDLP 60
           MRG+GGPLLCIGDLLCDVGEE++ E KG N+TPKS  SPS+S    S       QP DLP
Sbjct: 1   MRGTGGPLLCIGDLLCDVGEEEAVEGKGLNETPKSIPSPSSSSSSVSTTLFDLSQPPDLP 60

Query: 61  KLFQHNYHRLNKAFDDNDHSWTALTLKMCSALDTAGKLVESTNSNSRVLLDKVLEFEQVL 120
           +LFQ NY +LNK FDDNDHSWTALTLKMCSALDTA KLVESTNSNSR LL+K++E E VL
Sbjct: 61  QLFQENYDQLNKVFDDNDHSWTALTLKMCSALDTATKLVESTNSNSRFLLEKIVELEHVL 120

Query: 121 KKGDSTREAAMAIQTSYSSQVAQDSISSQNQG 147
           +KGD+TREAAMAIQTSYSSQ+AQDSISS N+G
Sbjct: 121 EKGDATREAAMAIQTSYSSQIAQDSISSLNEG 152

[Close]

BLAST of Sed0028054.1 vs. ExPASy TrEMBL
Match: A0A1S3BE50 (uncharacterized protein LOC103488633 isoform X4 OS=Cucumis melo OX=3656 GN=LOC103488633 PE=4 SV=1)

HSP 1 Score: 213.8 bits (543), Expect = 4.9e-52
Identity = 113/152 (74.34%), Postives = 127/152 (83.55%), Query Frame = 0


Query: 1   MRGSGGPLLCIGDLLCDVGEEQSGERKGSNQTPKSPSSPSTSLPLQSL------QPTDLP 60
           MRG+GGPLLCIGDLLCDVGEE++ E KG N+TPKS  SPS+S    S       QP DLP
Sbjct: 1   MRGTGGPLLCIGDLLCDVGEEEAVEGKGLNETPKSIPSPSSSSSSVSTTLFDLSQPPDLP 60

Query: 61  KLFQHNYHRLNKAFDDNDHSWTALTLKMCSALDTAGKLVESTNSNSRVLLDKVLEFEQVL 120
           +LFQ NY +LNK FDDNDHSWTALTLKMCSALDTA KLVESTNSNSR LL+K++E E VL
Sbjct: 61  QLFQENYDQLNKVFDDNDHSWTALTLKMCSALDTATKLVESTNSNSRFLLEKIVELEHVL 120

Query: 121 KKGDSTREAAMAIQTSYSSQVAQDSISSQNQG 147
           +KGD+TREAAMAIQTSYSSQ+AQDSISS N+G
Sbjct: 121 EKGDATREAAMAIQTSYSSQIAQDSISSLNEG 152

[Close]

BLAST of Sed0028054.1 vs. ExPASy TrEMBL
Match: A0A0A0K969 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G040570 PE=4 SV=1)

HSP 1 Score: 211.5 bits (537), Expect = 2.4e-51
Identity = 112/152 (73.68%), Postives = 126/152 (82.89%), Query Frame = 0


Query: 1   MRGSGGPLLCIGDLLCDVGEEQSGERKGSNQTPKSPSSPSTSLPLQSL------QPTDLP 60
           MRG+GGPLLCIGDLLCDVGE+++ E KG N+TP+S  SPS+S    S       QP DLP
Sbjct: 1   MRGTGGPLLCIGDLLCDVGEDEAVEGKGLNETPRSIPSPSSSSSSVSTTIFDLSQPPDLP 60

Query: 61  KLFQHNYHRLNKAFDDNDHSWTALTLKMCSALDTAGKLVESTNSNSRVLLDKVLEFEQVL 120
           KLFQ NY +LNK FDDNDHSWTALTLKMCSALDTA KLVESTNSNSR LL+K++E E VL
Sbjct: 61  KLFQENYDQLNKVFDDNDHSWTALTLKMCSALDTATKLVESTNSNSRFLLEKIVELEHVL 120

Query: 121 KKGDSTREAAMAIQTSYSSQVAQDSISSQNQG 147
           +KGD+TREAAMAIQTSYSS VAQDSISS N+G
Sbjct: 121 EKGDATREAAMAIQTSYSSHVAQDSISSLNEG 152

[Close]

BLAST of Sed0028054.1 vs. TAIR 10
Match: AT4G08240.2 (unknown protein; Has 33 Blast hits to 33 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 33; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 113.6 bits (283), Expect = 1.3e-25
Identity = 62/135 (45.93%), Postives = 89/135 (65.93%), Query Frame = 0


Query: 1   MRGSGGPLLCIGDLLCDVGEEQSGERKGSNQTPKSPSSPSTSLPLQSLQ-PTDLPKLFQH 60
           MRG GGPLL IGDLL D+G+E       S Q   +P   S S    ++  P DL +LFQ 
Sbjct: 1   MRGVGGPLLSIGDLLADLGDETG----HSPQNHPNPEVSSKSYSDDTISGPLDLTRLFQE 60

Query: 61  NYHRLNKAFDDNDHSWTALTLKMCSALDTAGKLVESTNSNSRVLLDKVLEFEQVLKKGDS 120
           NY +LN AF  +DHSWT+LTL++C++L+TA KLV +T +N+R+L +KV E E+++K+GDS
Sbjct: 61  NYDKLNDAFAGSDHSWTSLTLELCTSLETANKLVHATTTNARLLSEKVEELEKIVKRGDS 120

Query: 121 TREAAMAIQTSYSSQ 135
              AA  +  + + +
Sbjct: 121 AVAAARTVHATVNQK 131

[Close]

BLAST of Sed0028054.1 vs. TAIR 10
Match: AT4G08240.1 (unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 113.6 bits (283), Expect = 1.3e-25
Identity = 62/135 (45.93%), Postives = 89/135 (65.93%), Query Frame = 0


Query: 1   MRGSGGPLLCIGDLLCDVGEEQSGERKGSNQTPKSPSSPSTSLPLQSLQ-PTDLPKLFQH 60
           MRG GGPLL IGDLL D+G+E       S Q   +P   S S    ++  P DL +LFQ 
Sbjct: 1   MRGVGGPLLSIGDLLADLGDETG----HSPQNHPNPEVSSKSYSDDTISGPLDLTRLFQE 60

Query: 61  NYHRLNKAFDDNDHSWTALTLKMCSALDTAGKLVESTNSNSRVLLDKVLEFEQVLKKGDS 120
           NY +LN AF  +DHSWT+LTL++C++L+TA KLV +T +N+R+L +KV E E+++K+GDS
Sbjct: 61  NYDKLNDAFAGSDHSWTSLTLELCTSLETANKLVHATTTNARLLSEKVEELEKIVKRGDS 120

Query: 121 TREAAMAIQTSYSSQ 135
              AA  +  + + +
Sbjct: 121 AVAAARTVHATVNQK 131

The following BLAST results are available for this feature:

BLAST of Sed0028054.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023516408.1	9.8e-55	78.95	uncharacterized protein LOC111780279 [Cucurbita pepo subsp. pepo]	[more]
KAG6602083.1	2.2e-54	78.29	DIS3-like exonuclease 2, partial [Cucurbita argyrosperma subsp. sororia]	[more]
KAG7032788.1	2.2e-54	78.29	hypothetical protein SDJN02_06838 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022964546.1	2.8e-54	78.29	uncharacterized protein LOC111464539 [Cucurbita moschata]	[more]
XP_022989818.1	1.8e-53	76.32	uncharacterized protein LOC111486891 [Cucurbita maxima]	[more]

BLAST of Sed0028054.1 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Sed0028054.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HJ70	1.4e-54	78.29	uncharacterized protein LOC111464539 OS=Cucurbita moschata OX=3662 GN=LOC1114645...	[more]
A0A6J1JRF3	8.9e-54	76.32	uncharacterized protein LOC111486891 OS=Cucurbita maxima OX=3661 GN=LOC111486891...	[more]
A0A5D3BZV1	4.9e-52	74.34	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3BE50	4.9e-52	74.34	uncharacterized protein LOC103488633 isoform X4 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A0A0K969	2.4e-51	73.68	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G040570 PE=4 SV=1	[more]

BLAST of Sed0028054.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G08240.2	1.3e-25	45.93	unknown protein; Has 33 Blast hits to 33 proteins in 12 species: Archae - 0; Bac...	[more]
AT4G08240.1	1.3e-25	45.93	unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae -...	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 25..48
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 21..48
None	No IPR available	PANTHER	PTHR37237	OS02G0567000 PROTEIN	coord: 1..143

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Sed0028054	Sed0028054	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0028054.1-exon	Sed0028054.1-exon-LG03:4868558..4869314	exon
Sed0028054.1-exon	Sed0028054.1-exon-LG03:4869899..4869967	exon
Sed0028054.1-exon	Sed0028054.1-exon-LG03:4870035..4870527	exon

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0028054.1-three_prime_utr	Sed0028054.1-three_prime_utr-LG03:4868558..4869116	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0028054.1-cds	Sed0028054.1-cds-LG03:4869117..4869314	CDS
Sed0028054.1-cds	Sed0028054.1-cds-LG03:4869899..4869967	CDS
Sed0028054.1-cds	Sed0028054.1-cds-LG03:4870035..4870208	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0028054.1-five_prime_utr	Sed0028054.1-five_prime_utr-LG03:4870209..4870527	five_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Sed0028054.1	Sed0028054.1-protein	polypeptide