Cucsat.G4655 (gene) Cucumber (B10) v3

Overview
NameCucsat.G4655
Typegene
OrganismCucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
DescriptionRhamnogalacturonan endolyase
Locationctg1227: 1348203 .. 1351743 (+)
RNA-Seq ExpressionCucsat.G4655
SyntenyCucsat.G4655
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
CCTGATTTGCGCATTAAGATGAAAGCAACCTCTTCGTCCCAAACTCAACATATTAATCTCACTTATATAACTATCCTCAACTTGCCGGAAACAAGACATTACTTCTGTGAGAAAGAATTGGCTTCTCTCTCAAACAGTTAGTCGAAAGCCGCTGACATGCCGCCACTGGGTGTGCAGCTCTTTATTACAGAACGTCAGGTAAGTCCTTCCCTCCCTCTCTGCATCTCTCTCTCTGTCCACCTCTCTATTATTAAAGCGGTGAAATGTGCAGGTGACAATGGACAATGGCATAGTTCAAGTCACGTTATCAAACCCAGATGGCATAGTAACTGGAATTCGATACGGTGGAGTTGACAACGTGCTCGAAGTCCTAAACGATGAATCTAACCGAGGGTATATATTTTGAAGGAAATACTTGCCTATACACTTTATTCAGTTGATGGTTCGACGACTTTCTTATTTGGCTTATTCTTCGTTATTCAAGAACATCAGCAGGATCGATGCAATTTGAAGAATAAAAATAAGTCACGTTAGAAAGTCATTAAGAGTTCCGACTGATGATGATGGGTGTTTAGAAACGTATTATTCTACAAAGAACATCATTTCGATTTCATTAATTGTGTCCATGCATGAGTTAGAGGCTATATTACAAAAATTATGCTCCTAAACTTTCTCATTTGTTTAAAAAATACTCTTACTCTTTTAAAAGTTGTAATATTAGCCTTGACCTTTCATTTGTCTCAGAAACTAACTTTAAAGTAGAAATTCTTTGAAGCTTTTAATGGAAACTGAGATATGAAATGTGTGTGTTGCAGTGTACGAGTTATCACTGTATGCTGTGTTATGTTGTCTTTTTTGTCTAATGTGACATGTCCATTCCAATGGAAGAATGTGATATTTTTTGAAATGAATGCCAGTTTGGAGTTAAGTTTTGTAATTTAGTCTAAGTTAAATGTTTGTCGTTTGTAATTTCACTTTTCATGCAGGTATTGGGACCTCGTGTGGAGCTCATCATCGTCCACAACTGGATTGTTTGATGTGTATGTATTCGCTTCTCTGCTTTTTTTTCTTTTCAAGTTGGATTTCTTACAGATTTTCGGGCCTCTAAGCTTTTTCCTTGGTTAATACGTGTAACTTTGTTTTGTAGGATAAAGGCTACAGGTTTCGAGGTCATAGTGGAAAATGAAGAACAAGTGGAACTCTCCTTTACAAGAACATGGGATCTGTCTCTCGAGGGAAAACTTGTGCCTTTAGAGATTGATAAAAGGTGACATTGAATTCATGCAGTCTGCTAAAATTAAAGTTGCAAACCTCTTTCTGATGAGTGGATTTGTAGCTTTGTAGGTTTATAATGCTCCGGGGTTCGTCTGGGTTCTACTCTTACGCTATTTACCAACACCTGGAAGAATGGCCTGGTTTCAACCTTGGTGAAACTAGACTCGCCTTCAAACTCAGAAAAGACAAGTATCAAATTCTCAACAATATTCCTTTTTTAATGCTTAATTTAAAGCATTCGTGTGGACTTTTTAGTATTATTCTGGACACGGTCATATATGGTTGGACACAAATATTCTTTTGTAGGTTCCACTATATGGCCATGGCAGACAACAGACAGAGGTACATGCCACTTCCAGATGACCGTTCTCCGCCTAGAGGTCGTGCCCTGGCATATCCAGAGGCTGTCCTGCTCGTCGACCCCATCGAACCTGAGCTCCAGGGAGAGGTCTATTATCGAATCTCTTCTTTATAAGCCTCTAATTTTGTTTAAAGCAAAAGAAAAAAAGAAGTGTCATAAGATCAGCGAAATCACCGCTCAGAGCAAAACTCAAGTTAATTATTAATTTATATTCTTTATACTTTTCTTCTCTTTACATAAAAAATGTGCACAAAACTCAACATGATTATCAATATTAATTATCGTATACTGTGTTAAATCGTTACTTAATAGATAAGAGCAATTTTTTTCCTTACAATGTGGGACTACAAATTTAAATATCTGATCTTTATAATTCTACAACCACGTATATGATTAAATTTATTGACGGATTCAATTATGGGCAATGATCTATTCGATCATCATTAGACCGAAAATTAAGCCTATGACTACACTACAATTTTCACCAAAACCAATCTTTTATTATTTTCTTTTTTATAGAGAAAACCAGAATCATGCTAACGTAAATGAGTTTTGATTCCTCTAATTTCATATGGACTGTAAAGGTGGATGACAAATATCAGTACTCATGCGACAACAAAGACAGCGGCGTCCATGGATGGATATCCACCGATCCGGCAGTCGGATTCTGGCTAATCTCCCCGAGCAATGAGTTCCGATCCGGTGGACCCGTTAAACAGAACCTAACTTCACACGTCGGCCCAACCACCCTAGCTGTAAGTGATTCTTCGTTCATTCAGCCATCAATCGTTATCCTTGGCTTTGATGTTCGATATAATTGGAATTAAGCCAGATTATACATTTACCTTAACTATGGAATCAGGTTTTTATAAGCGCACATTACGCGGGAGAGGATCTGGTGCCGAAAATCGGAGCCGGCGAGGCGTGGAAGAAAGTTTTCGGTCCTGTGTTCATCTATCTCAACTCCACTTATGATTCCTTCGACGCACTTCAGCTCTGGGAAGATGCCAAAGCACAGGTTTCTTCTATTTTTCTTCATTTCCATTCAATGACAATTCTTTTCTCGCGTCTTCTTTACCCACATCCAAATTTCTGGGTTTTTTTTTTTTTTTTTTGAATTATTCCAGTTCCTAAGATGGGTAATTTGACCTGTCTACTATCTTTTTACACAAAAAATAGACAATCTATTATTATATATATGTGTTTGCCACACGGTGTAAGTTTATTAAAAAAATTATTTGGACTTTACCAAGATAAGCGGCTGCCTGCAATCGAACCTGCGCCTAAGTTTTTCTTCTTGTTTGTTCATCAATTATTTTAAGTTCCAACATATCCATAAAATTTGTAGTACTTTCAATTTTGTCTCAGTACTAGTAAAGGTGTATGGATTAAATTTGAAAAAATAGATTTTAGTCAAAAGTTTTGGCAAGAAAACTTTTCCTGTGACTTACTTTGAGTTACTCTTAAAATCAAATAAAATTTAAGAAATATTTTTCCCCATGAAAAGGCAGTGATCGAAGTCCAGAGTTGGCCCTACAGCTTCCCTGCTTCGGATGATTTTCCAAGGTCAAACCAACGTAGTAGTATCAGTGGTAAACTATTAGTCAAGGATAGGTACACAATTGCCTCAACATTATATTTAAAATGTTTATGATGGAAATTCTGGTGAATTTTAGTGCTTCATCCAAAACTAATTGGCTAATTTAAATATCGCGACTTGATTTTAGCTACGTCAATGAAGACTTGATACCAGCAGACGGTGCGTTTGTTGGCCTGGCTCCACCAGGAGACGTAGGATCATGGCAACGAGAGAGCAAGGTAAAATAATTTAATTTTCTTGTTTAACCAATAAATTTTATAGAATTATTTTGATGGTATCGTCCAAAATTTTTTAGGGTTACCAATTTTGGAGTAGAGCAGATGAAAGTGGAAATTTCTCCATCGATGGCGTGAGGCCGGGCGACTACAATCTGTATGCATGGGTCCCCGGTTTTATTGGAGATTATCGTTATGATGCTCTCATCAACCTTACAGAAGGTTCCAATTTTCTTACTCTATGGCAATAAAATTGGTTAGAATCTCTAGTTTAGAAAAGTTAATGGGACAATCTGATGTTTCTATTGAAAAATATATAAACATTTCTCTTCCAAATTTCCAATGGACCTTAGCGTAAATGCATTTTGGTGTCTGAGTTTGCATATTCAATATTCAAACTTCAGTTTGACCTCTTCCATGAGGTTATTAACTTTAAATTTTAATTGATCTAAGAGAAAATTAATTAATTGTTGCCAAAATAAGTATAATTTAATTATAAAAAATGTTCAAATCAACCAACATATTTACTAGATATAACAAAATTTTAGATCTAACTAGTTAATACTAGTTACTATCGAATTAATTAGAAATCCTCTCATGGTTGAAAAAAATCTCTCACTCATAGTGGTATAAAGTTGAATAGATCCAAGATTCATTTGTTGGGTTGTTTTGTACCAATCCATTTCTATCTGTACTATATGTCTGTTTTTTTCTTCTAAATTTGGACAAGCAATTATAGGTTAATTTTGTTAATATACGATAATTTATGTAGGCAGTGAGGTGGACATGGGAGACATAACATACGAACCTCCGAGACAAGGAGCCACACTATGGGAAATAGGAATCCCAGATCGCTCCGCAGCAGAGTTCTACGTTCCAGATCCAAATCCCAACTACGTCAATAAGCTCTACCTTAACCATCCTGATAAGTAAATGAACCTACTTCATATTTCAAGCCCACTGATTTTTCATTATTCCCCTTTAATCGAATCAAAAGATTTGGTGAATCCTTGTACCAAGTCTTGATGAGATATCACTTTGATAAAATTACTCCCACGTTCTTAATTAATCTGATAAAGGATTTGACAGGTTTCGGCAGTATGGCCTATGGGAAAGATACAGTGAATTGTTTCCCGACTCAGATTTGGTATATACCGTTGGCGTTAGTGACTACACCAAGGATTGGTTCTTTGCTCAGGTCCCCAGGTGTGTGCTTCATTAATTTTTCCGATCATCCAGAAATAATTTCAAACTTGTTTGGTTTGATTATTAAAATGGAATTCCATAATTAAACTGATAAACCAAAAACCTGGGAGATACGAACAGTATAGTATCCATCTGTTTGACAGCTTCTTTTCACCTACAGGAAGATGGAAAATGGGACATATAAGGGAACAACGTGGCAAGTGAAGTTCGAGCTAGACGACGTGGACAACCAAGCAACTTACAAGCTTCGGGTTGCATTGGCCTCCGTTTCTCTCGCAGAATTGCAGGTATACCAAATTTCAACGTTTCCTTTTCCTAAAAAGTTGAATTGCCAAATCATATTGTTTCTAAACGTTGCACTTTCTTAATAGCAGTAAGATGTTTATCTGATTAGTTAGAAGCCTAGTAACAGTGAATGAAAGGAAAGTTTTGAGTTTTGAAGGTTGGAGTTAACGAGGCCAAAGCAAAGGCAGTGTTCTCGAGTGGACTTATCGGGAGGGACAATTCGATTGCAAGACACGGCATTCACGGCCTATATTGGGTTTACAACATTGACATTCCTGGAAATCGGCTGGTCACCGGCAATAACACCATCTTCTTCACCCAACCCAGATGCACAGGCCCTTTCCAAGCGATTATGTACGATTACATTCGTCTGGAAGCTCCTCCACCTCCATCCTCCGCCCATCCTTTGGAATAATATTCCCCTACCACACGTCCTTCCCTTCCACATCCTTAATTTCCACCATTTGCTTTCTTGTTTCGTTTTCTTTATACACAATCAATTTCGCTAACTTAAAAACTGTACTCGTAACCAGGGTAGGATCTTTCCTAAGGGGTTTAGAATGAGATTCAGACTTTTAGAATTGATAAAGTTCATAATAAAACCTATGTCGTGAAACTACTACAATCTCATGTGTCGTGAAAAATGCAAAACCAAAAAACAATTTTATAGACATCATATTATTCAGTACAAAATATGTACAAAATATTGGGATACTTGCTCATTATTATTTTGATTTGATTTATTAATGAATTAAGTTCCTTTCTT

Coding sequence (CDS)

ATGCCGCCACTGGGTGTGCAGCTCTTTATTACAGAACGTCAGGTGACAATGGACAATGGCATAGTTCAAGTCACGTTATCAAACCCAGATGGCATAGTAACTGGAATTCGATACGGTGGAGTTGACAACGTGCTCGAAGTCCTAAACGATGAATCTAACCGAGGGTATTGGGACCTCGTGTGGAGCTCATCATCGTCCACAACTGGATTGTTTGATGTGATAAAGGCTACAGGTTTCGAGGTCATAGTGGAAAATGAAGAACAAGTGGAACTCTCCTTTACAAGAACATGGGATCTGTCTCTCGAGGGAAAACTTGTGCCTTTAGAGATTGATAAAAGGTTTATAATGCTCCGGGGTTCGTCTGGGTTCTACTCTTACGCTATTTACCAACACCTGGAAGAATGGCCTGGTTTCAACCTTGGTGAAACTAGACTCGCCTTCAAACTCAGAAAAGACAAGTTCCACTATATGGCCATGGCAGACAACAGACAGAGGTACATGCCACTTCCAGATGACCGTTCTCCGCCTAGAGGTCGTGCCCTGGCATATCCAGAGGCTGTCCTGCTCGTCGACCCCATCGAACCTGAGCTCCAGGGAGAGGTGGATGACAAATATCAGTACTCATGCGACAACAAAGACAGCGGCGTCCATGGATGGATATCCACCGATCCGGCAGTCGGATTCTGGCTAATCTCCCCGAGCAATGAGTTCCGATCCGGTGGACCCGTTAAACAGAACCTAACTTCACACGTCGGCCCAACCACCCTAGCTGTTTTTATAAGCGCACATTACGCGGGAGAGGATCTGGTGCCGAAAATCGGAGCCGGCGAGGCGTGGAAGAAAGTTTTCGGTCCTGTGTTCATCTATCTCAACTCCACTTATGATTCCTTCGACGCACTTCAGCTCTGGGAAGATGCCAAAGCACAGGCAGTGATCGAAGTCCAGAGTTGGCCCTACAGCTTCCCTGCTTCGGATGATTTTCCAAGGTCAAACCAACGTAGTAGTATCAGTGGTAAACTATTAGTCAAGGATAGCTACGTCAATGAAGACTTGATACCAGCAGACGGTGCGTTTGTTGGCCTGGCTCCACCAGGAGACGTAGGATCATGGCAACGAGAGAGCAAGGGTTACCAATTTTGGAGTAGAGCAGATGAAAGTGGAAATTTCTCCATCGATGGCGTGAGGCCGGGCGACTACAATCTGTATGCATGGGTCCCCGGTTTTATTGGAGATTATCGTTATGATGCTCTCATCAACCTTACAGAAGGCAGTGAGGTGGACATGGGAGACATAACATACGAACCTCCGAGACAAGGAGCCACACTATGGGAAATAGGAATCCCAGATCGCTCCGCAGCAGAGTTCTACGTTCCAGATCCAAATCCCAACTACGTCAATAAGCTCTACCTTAACCATCCTGATAAGTTTCGGCAGTATGGCCTATGGGAAAGATACAGTGAATTGTTTCCCGACTCAGATTTGGTATATACCGTTGGCGTTAGTGACTACACCAAGGATTGGTTCTTTGCTCAGGTCCCCAGGAAGATGGAAAATGGGACATATAAGGGAACAACGTGGCAAGTGAAGTTCGAGCTAGACGACGTGGACAACCAAGCAACTTACAAGCTTCGGGTTGCATTGGCCTCCGTTTCTCTCGCAGAATTGCAGGTTGGAGTTAACGAGGCCAAAGCAAAGGCAGTGTTCTCGAGTGGACTTATCGGGAGGGACAATTCGATTGCAAGACACGGCATTCACGGCCTATATTGGGTTTACAACATTGACATTCCTGGAAATCGGCTGGTCACCGGCAATAACACCATCTTCTTCACCCAACCCAGATGCACAGGCCCTTTCCAAGCGATTATGTACGATTACATTCGTCTGGAAGCTCCTCCACCTCCATCCTCCGCCCATCCTTTGGAATAA

Protein sequence

MPPLGVQLFITERQVTMDNGIVQVTLSNPDGIVTGIRYGGVDNVLEVLNDESNRGYWDLVWSSSSSTTGLFDVIKATGFEVIVENEEQVELSFTRTWDLSLEGKLVPLEIDKRFIMLRGSSGFYSYAIYQHLEEWPGFNLGETRLAFKLRKDKFHYMAMADNRQRYMPLPDDRSPPRGRALAYPEAVLLVDPIEPELQGEVDDKYQYSCDNKDSGVHGWISTDPAVGFWLISPSNEFRSGGPVKQNLTSHVGPTTLAVFISAHYAGEDLVPKIGAGEAWKKVFGPVFIYLNSTYDSFDALQLWEDAKAQAVIEVQSWPYSFPASDDFPRSNQRSSISGKLLVKDSYVNEDLIPADGAFVGLAPPGDVGSWQRESKGYQFWSRADESGNFSIDGVRPGDYNLYAWVPGFIGDYRYDALINLTEGSEVDMGDITYEPPRQGATLWEIGIPDRSAAEFYVPDPNPNYVNKLYLNHPDKFRQYGLWERYSELFPDSDLVYTVGVSDYTKDWFFAQVPRKMENGTYKGTTWQVKFELDDVDNQATYKLRVALASVSLAELQVGVNEAKAKAVFSSGLIGRDNSIARHGIHGLYWVYNIDIPGNRLVTGNNTIFFTQPRCTGPFQAIMYDYIRLEAPPPPSSAHPLE
Homology
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BLAST of Cucsat.G4655 vs. NCBI nr
Match: XP_031736466.1 (probable rhamnogalacturonate lyase B isoform X2 [Cucumis sativus])

HSP 1 Score: 449 bits (1154), Expect = 1.23e-154
Identity = 214/214 (100.00%), Postives = 214/214 (100.00%), Query Frame = 0 

Query: 1   MGDITYEPPRQGATLWEIGIPDRSAAEFYVPDPNPNYVNKLYLNHPDKFRQYGLWERYSE 60
           MGDITYEPPRQGATLWEIGIPDRSAAEFYVPDPNPNYVNKLYLNHPDKFRQYGLWERYSE
Sbjct: 313 MGDITYEPPRQGATLWEIGIPDRSAAEFYVPDPNPNYVNKLYLNHPDKFRQYGLWERYSE 372

Query: 61  LFPDSDLVYTVGVSDYTKDWFFAQVPRKMENGTYKGTTWQVKFELDDVDNQATYKLRVAL 120
           LFPDSDLVYTVGVSDYTKDWFFAQVPRKMENGTYKGTTWQVKFELDDVDNQATYKLRVAL
Sbjct: 373 LFPDSDLVYTVGVSDYTKDWFFAQVPRKMENGTYKGTTWQVKFELDDVDNQATYKLRVAL 432

Query: 121 ASVSLAELQVGVNEAKAKAVFSSGLIGRDNSIARHGIHGLYWVYNIDIPGNRLVTGNNTI 180
           ASVSLAELQVGVNEAKAKAVFSSGLIGRDNSIARHGIHGLYWVYNIDIPGNRLVTGNNTI
Sbjct: 433 ASVSLAELQVGVNEAKAKAVFSSGLIGRDNSIARHGIHGLYWVYNIDIPGNRLVTGNNTI 492

Query: 181 FFTQPRCTGPFQAIMYDYIRLEAPPPPSSAHPLE 214
           FFTQPRCTGPFQAIMYDYIRLEAPPPPSSAHPLE
Sbjct: 493 FFTQPRCTGPFQAIMYDYIRLEAPPPPSSAHPLE 526

[Close]
BLAST of Cucsat.G4655 vs. NCBI nr
Match: XP_004152608.2 (probable rhamnogalacturonate lyase B isoform X1 [Cucumis sativus] >KGN62737.1 hypothetical protein Csa_022438 [Cucumis sativus])

HSP 1 Score: 449 bits (1154), Expect = 4.71e-153
Identity = 214/214 (100.00%), Postives = 214/214 (100.00%), Query Frame = 0 

Query: 1   MGDITYEPPRQGATLWEIGIPDRSAAEFYVPDPNPNYVNKLYLNHPDKFRQYGLWERYSE 60
           MGDITYEPPRQGATLWEIGIPDRSAAEFYVPDPNPNYVNKLYLNHPDKFRQYGLWERYSE
Sbjct: 428 MGDITYEPPRQGATLWEIGIPDRSAAEFYVPDPNPNYVNKLYLNHPDKFRQYGLWERYSE 487

Query: 61  LFPDSDLVYTVGVSDYTKDWFFAQVPRKMENGTYKGTTWQVKFELDDVDNQATYKLRVAL 120
           LFPDSDLVYTVGVSDYTKDWFFAQVPRKMENGTYKGTTWQVKFELDDVDNQATYKLRVAL
Sbjct: 488 LFPDSDLVYTVGVSDYTKDWFFAQVPRKMENGTYKGTTWQVKFELDDVDNQATYKLRVAL 547

Query: 121 ASVSLAELQVGVNEAKAKAVFSSGLIGRDNSIARHGIHGLYWVYNIDIPGNRLVTGNNTI 180
           ASVSLAELQVGVNEAKAKAVFSSGLIGRDNSIARHGIHGLYWVYNIDIPGNRLVTGNNTI
Sbjct: 548 ASVSLAELQVGVNEAKAKAVFSSGLIGRDNSIARHGIHGLYWVYNIDIPGNRLVTGNNTI 607

Query: 181 FFTQPRCTGPFQAIMYDYIRLEAPPPPSSAHPLE 214
           FFTQPRCTGPFQAIMYDYIRLEAPPPPSSAHPLE
Sbjct: 608 FFTQPRCTGPFQAIMYDYIRLEAPPPPSSAHPLE 641

[Close]
BLAST of Cucsat.G4655 vs. NCBI nr
Match: XP_008444896.1 (PREDICTED: probable rhamnogalacturonate lyase B isoform X2 [Cucumis melo])

HSP 1 Score: 431 bits (1109), Expect = 7.31e-147
Identity = 207/216 (95.83%), Postives = 211/216 (97.69%), Query Frame = 0 

Query: 1   MGDITYEPPRQGATLWEIGIPDRSAAEFYVPDPNPNYVNKLYLNHPDKFRQYGLWERYSE 60
           MGDITYEPPRQGATLWEIGIPDRSAAEFYVPDPNPNY+NKLYLNHPDKFRQYGLWERYSE
Sbjct: 380 MGDITYEPPRQGATLWEIGIPDRSAAEFYVPDPNPNYINKLYLNHPDKFRQYGLWERYSE 439

Query: 61  LFPDSDLVYTVGVSDYTKDWFFAQVPRKMENGTYKGTTWQVKFELDDVDNQATYKLRVAL 120
           LFPDSDLVY VGVSDYTKDWFFAQVPRK+ENGTYKGTTWQVKFELD+VDNQATYKLRVAL
Sbjct: 440 LFPDSDLVYNVGVSDYTKDWFFAQVPRKIENGTYKGTTWQVKFELDNVDNQATYKLRVAL 499

Query: 121 ASVSLAELQVGVNEAKAKAVFSSGLIGRDNSIARHGIHGLYWVYNIDIPGNRLVTGNNTI 180
           AS SLAELQVGVNEAKAKAVFSSGLIGRDNSIARHGIHGLYW+YNIDIPGNRLVTGNNTI
Sbjct: 500 ASASLAELQVGVNEAKAKAVFSSGLIGRDNSIARHGIHGLYWLYNIDIPGNRLVTGNNTI 559

Query: 181 FFTQPRCTGPFQAIMYDYIRLEAPPPP--SSAHPLE 214
           FFTQPR TGPFQAIMYDYIRLEAPPPP  SSAHPLE
Sbjct: 560 FFTQPRSTGPFQAIMYDYIRLEAPPPPPPSSAHPLE 595

[Close]
BLAST of Cucsat.G4655 vs. NCBI nr
Match: XP_008444895.1 (PREDICTED: probable rhamnogalacturonate lyase B isoform X1 [Cucumis melo])

HSP 1 Score: 431 bits (1109), Expect = 3.17e-146
Identity = 207/216 (95.83%), Postives = 211/216 (97.69%), Query Frame = 0 

Query: 1   MGDITYEPPRQGATLWEIGIPDRSAAEFYVPDPNPNYVNKLYLNHPDKFRQYGLWERYSE 60
           MGDITYEPPRQGATLWEIGIPDRSAAEFYVPDPNPNY+NKLYLNHPDKFRQYGLWERYSE
Sbjct: 428 MGDITYEPPRQGATLWEIGIPDRSAAEFYVPDPNPNYINKLYLNHPDKFRQYGLWERYSE 487

Query: 61  LFPDSDLVYTVGVSDYTKDWFFAQVPRKMENGTYKGTTWQVKFELDDVDNQATYKLRVAL 120
           LFPDSDLVY VGVSDYTKDWFFAQVPRK+ENGTYKGTTWQVKFELD+VDNQATYKLRVAL
Sbjct: 488 LFPDSDLVYNVGVSDYTKDWFFAQVPRKIENGTYKGTTWQVKFELDNVDNQATYKLRVAL 547

Query: 121 ASVSLAELQVGVNEAKAKAVFSSGLIGRDNSIARHGIHGLYWVYNIDIPGNRLVTGNNTI 180
           AS SLAELQVGVNEAKAKAVFSSGLIGRDNSIARHGIHGLYW+YNIDIPGNRLVTGNNTI
Sbjct: 548 ASASLAELQVGVNEAKAKAVFSSGLIGRDNSIARHGIHGLYWLYNIDIPGNRLVTGNNTI 607

Query: 181 FFTQPRCTGPFQAIMYDYIRLEAPPPP--SSAHPLE 214
           FFTQPR TGPFQAIMYDYIRLEAPPPP  SSAHPLE
Sbjct: 608 FFTQPRSTGPFQAIMYDYIRLEAPPPPPPSSAHPLE 643

[Close]
BLAST of Cucsat.G4655 vs. NCBI nr
Match: KAA0065109.1 (putative rhamnogalacturonate lyase B isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 428 bits (1101), Expect = 5.13e-145
Identity = 206/216 (95.37%), Postives = 210/216 (97.22%), Query Frame = 0 

Query: 1   MGDITYEPPRQGATLWEIGIPDRSAAEFYVPDPNPNYVNKLYLNHPDKFRQYGLWERYSE 60
           MGDITYEPPRQGATLWEIGIPDRSAAEFYVPDPNPNY+NKLYLNHPDKFRQYGLWERYSE
Sbjct: 428 MGDITYEPPRQGATLWEIGIPDRSAAEFYVPDPNPNYINKLYLNHPDKFRQYGLWERYSE 487

Query: 61  LFPDSDLVYTVGVSDYTKDWFFAQVPRKMENGTYKGTTWQVKFELDDVDNQATYKLRVAL 120
           LFPDSDLVY VGVSDYTKDWFFAQVPR +ENGTYKGTTWQVKFELD+VDNQATYKLRVAL
Sbjct: 488 LFPDSDLVYNVGVSDYTKDWFFAQVPRCIENGTYKGTTWQVKFELDNVDNQATYKLRVAL 547

Query: 121 ASVSLAELQVGVNEAKAKAVFSSGLIGRDNSIARHGIHGLYWVYNIDIPGNRLVTGNNTI 180
           AS SLAELQVGVNEAKAKAVFSSGLIGRDNSIARHGIHGLYW+YNIDIPGNRLVTGNNTI
Sbjct: 548 ASASLAELQVGVNEAKAKAVFSSGLIGRDNSIARHGIHGLYWLYNIDIPGNRLVTGNNTI 607

Query: 181 FFTQPRCTGPFQAIMYDYIRLEAPPPP--SSAHPLE 214
           FFTQPR TGPFQAIMYDYIRLEAPPPP  SSAHPLE
Sbjct: 608 FFTQPRSTGPFQAIMYDYIRLEAPPPPPPSSAHPLE 643

[Close]
BLAST of Cucsat.G4655 vs. ExPASy TrEMBL
Match: A0A0A0LPL0 (Rhamnogalacturonan endolyase OS=Cucumis sativus OX=3659 GN=Csa_2G370370 PE=3 SV=1)

HSP 1 Score: 449 bits (1154), Expect = 2.28e-153
Identity = 214/214 (100.00%), Postives = 214/214 (100.00%), Query Frame = 0 

Query: 1   MGDITYEPPRQGATLWEIGIPDRSAAEFYVPDPNPNYVNKLYLNHPDKFRQYGLWERYSE 60
           MGDITYEPPRQGATLWEIGIPDRSAAEFYVPDPNPNYVNKLYLNHPDKFRQYGLWERYSE
Sbjct: 428 MGDITYEPPRQGATLWEIGIPDRSAAEFYVPDPNPNYVNKLYLNHPDKFRQYGLWERYSE 487

Query: 61  LFPDSDLVYTVGVSDYTKDWFFAQVPRKMENGTYKGTTWQVKFELDDVDNQATYKLRVAL 120
           LFPDSDLVYTVGVSDYTKDWFFAQVPRKMENGTYKGTTWQVKFELDDVDNQATYKLRVAL
Sbjct: 488 LFPDSDLVYTVGVSDYTKDWFFAQVPRKMENGTYKGTTWQVKFELDDVDNQATYKLRVAL 547

Query: 121 ASVSLAELQVGVNEAKAKAVFSSGLIGRDNSIARHGIHGLYWVYNIDIPGNRLVTGNNTI 180
           ASVSLAELQVGVNEAKAKAVFSSGLIGRDNSIARHGIHGLYWVYNIDIPGNRLVTGNNTI
Sbjct: 548 ASVSLAELQVGVNEAKAKAVFSSGLIGRDNSIARHGIHGLYWVYNIDIPGNRLVTGNNTI 607

Query: 181 FFTQPRCTGPFQAIMYDYIRLEAPPPPSSAHPLE 214
           FFTQPRCTGPFQAIMYDYIRLEAPPPPSSAHPLE
Sbjct: 608 FFTQPRCTGPFQAIMYDYIRLEAPPPPSSAHPLE 641

[Close]
BLAST of Cucsat.G4655 vs. ExPASy TrEMBL
Match: A0A1S3BAY7 (Rhamnogalacturonan endolyase OS=Cucumis melo OX=3656 GN=LOC103488110 PE=3 SV=1)

HSP 1 Score: 431 bits (1109), Expect = 3.54e-147
Identity = 207/216 (95.83%), Postives = 211/216 (97.69%), Query Frame = 0 

Query: 1   MGDITYEPPRQGATLWEIGIPDRSAAEFYVPDPNPNYVNKLYLNHPDKFRQYGLWERYSE 60
           MGDITYEPPRQGATLWEIGIPDRSAAEFYVPDPNPNY+NKLYLNHPDKFRQYGLWERYSE
Sbjct: 380 MGDITYEPPRQGATLWEIGIPDRSAAEFYVPDPNPNYINKLYLNHPDKFRQYGLWERYSE 439

Query: 61  LFPDSDLVYTVGVSDYTKDWFFAQVPRKMENGTYKGTTWQVKFELDDVDNQATYKLRVAL 120
           LFPDSDLVY VGVSDYTKDWFFAQVPRK+ENGTYKGTTWQVKFELD+VDNQATYKLRVAL
Sbjct: 440 LFPDSDLVYNVGVSDYTKDWFFAQVPRKIENGTYKGTTWQVKFELDNVDNQATYKLRVAL 499

Query: 121 ASVSLAELQVGVNEAKAKAVFSSGLIGRDNSIARHGIHGLYWVYNIDIPGNRLVTGNNTI 180
           AS SLAELQVGVNEAKAKAVFSSGLIGRDNSIARHGIHGLYW+YNIDIPGNRLVTGNNTI
Sbjct: 500 ASASLAELQVGVNEAKAKAVFSSGLIGRDNSIARHGIHGLYWLYNIDIPGNRLVTGNNTI 559

Query: 181 FFTQPRCTGPFQAIMYDYIRLEAPPPP--SSAHPLE 214
           FFTQPR TGPFQAIMYDYIRLEAPPPP  SSAHPLE
Sbjct: 560 FFTQPRSTGPFQAIMYDYIRLEAPPPPPPSSAHPLE 595

[Close]
BLAST of Cucsat.G4655 vs. ExPASy TrEMBL
Match: A0A1S3BCA7 (Rhamnogalacturonan endolyase OS=Cucumis melo OX=3656 GN=LOC103488110 PE=3 SV=1)

HSP 1 Score: 431 bits (1109), Expect = 1.54e-146
Identity = 207/216 (95.83%), Postives = 211/216 (97.69%), Query Frame = 0 

Query: 1   MGDITYEPPRQGATLWEIGIPDRSAAEFYVPDPNPNYVNKLYLNHPDKFRQYGLWERYSE 60
           MGDITYEPPRQGATLWEIGIPDRSAAEFYVPDPNPNY+NKLYLNHPDKFRQYGLWERYSE
Sbjct: 428 MGDITYEPPRQGATLWEIGIPDRSAAEFYVPDPNPNYINKLYLNHPDKFRQYGLWERYSE 487

Query: 61  LFPDSDLVYTVGVSDYTKDWFFAQVPRKMENGTYKGTTWQVKFELDDVDNQATYKLRVAL 120
           LFPDSDLVY VGVSDYTKDWFFAQVPRK+ENGTYKGTTWQVKFELD+VDNQATYKLRVAL
Sbjct: 488 LFPDSDLVYNVGVSDYTKDWFFAQVPRKIENGTYKGTTWQVKFELDNVDNQATYKLRVAL 547

Query: 121 ASVSLAELQVGVNEAKAKAVFSSGLIGRDNSIARHGIHGLYWVYNIDIPGNRLVTGNNTI 180
           AS SLAELQVGVNEAKAKAVFSSGLIGRDNSIARHGIHGLYW+YNIDIPGNRLVTGNNTI
Sbjct: 548 ASASLAELQVGVNEAKAKAVFSSGLIGRDNSIARHGIHGLYWLYNIDIPGNRLVTGNNTI 607

Query: 181 FFTQPRCTGPFQAIMYDYIRLEAPPPP--SSAHPLE 214
           FFTQPR TGPFQAIMYDYIRLEAPPPP  SSAHPLE
Sbjct: 608 FFTQPRSTGPFQAIMYDYIRLEAPPPPPPSSAHPLE 643

[Close]
BLAST of Cucsat.G4655 vs. ExPASy TrEMBL
Match: A0A5A7VI09 (Rhamnogalacturonan endolyase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G004440 PE=3 SV=1)

HSP 1 Score: 428 bits (1101), Expect = 2.48e-145
Identity = 206/216 (95.37%), Postives = 210/216 (97.22%), Query Frame = 0 

Query: 1   MGDITYEPPRQGATLWEIGIPDRSAAEFYVPDPNPNYVNKLYLNHPDKFRQYGLWERYSE 60
           MGDITYEPPRQGATLWEIGIPDRSAAEFYVPDPNPNY+NKLYLNHPDKFRQYGLWERYSE
Sbjct: 428 MGDITYEPPRQGATLWEIGIPDRSAAEFYVPDPNPNYINKLYLNHPDKFRQYGLWERYSE 487

Query: 61  LFPDSDLVYTVGVSDYTKDWFFAQVPRKMENGTYKGTTWQVKFELDDVDNQATYKLRVAL 120
           LFPDSDLVY VGVSDYTKDWFFAQVPR +ENGTYKGTTWQVKFELD+VDNQATYKLRVAL
Sbjct: 488 LFPDSDLVYNVGVSDYTKDWFFAQVPRCIENGTYKGTTWQVKFELDNVDNQATYKLRVAL 547

Query: 121 ASVSLAELQVGVNEAKAKAVFSSGLIGRDNSIARHGIHGLYWVYNIDIPGNRLVTGNNTI 180
           AS SLAELQVGVNEAKAKAVFSSGLIGRDNSIARHGIHGLYW+YNIDIPGNRLVTGNNTI
Sbjct: 548 ASASLAELQVGVNEAKAKAVFSSGLIGRDNSIARHGIHGLYWLYNIDIPGNRLVTGNNTI 607

Query: 181 FFTQPRCTGPFQAIMYDYIRLEAPPPP--SSAHPLE 214
           FFTQPR TGPFQAIMYDYIRLEAPPPP  SSAHPLE
Sbjct: 608 FFTQPRSTGPFQAIMYDYIRLEAPPPPPPSSAHPLE 643

[Close]
BLAST of Cucsat.G4655 vs. ExPASy TrEMBL
Match: A0A6J1KJU8 (Rhamnogalacturonan endolyase OS=Cucurbita maxima OX=3661 GN=LOC111495919 PE=3 SV=1)

HSP 1 Score: 396 bits (1018), Expect = 2.37e-134
Identity = 185/211 (87.68%), Postives = 200/211 (94.79%), Query Frame = 0 

Query: 3   DITYEPPRQGATLWEIGIPDRSAAEFYVPDPNPNYVNKLYLNHPDKFRQYGLWERYSELF 62
           +I YEPPR GATLWEIG+PDRSAAEFYVPDPNPNYVNKLYLNHPDKFRQYGLWERYSEL+
Sbjct: 315 EIIYEPPRAGATLWEIGVPDRSAAEFYVPDPNPNYVNKLYLNHPDKFRQYGLWERYSELY 374

Query: 63  PDSDLVYTVGVSDYTKDWFFAQVPRKMENGTYKGTTWQVKFELDDVDNQATYKLRVALAS 122
           PD+DLVYTVGVSDYTKDWFFAQV RK ENGT+KGTTWQVKFELD+VD+QATYKLRVALAS
Sbjct: 375 PDADLVYTVGVSDYTKDWFFAQVTRKTENGTFKGTTWQVKFELDNVDSQATYKLRVALAS 434

Query: 123 VSLAELQVGVNEAKAKAVFSSGLIGRDNSIARHGIHGLYWVYNIDIPGNRLVTGNNTIFF 182
            S+ ELQVGVN+ KAK +FSSGLIGRDNSIARHGIHGLYW+YN++IPGNRLV+G+NTIFF
Sbjct: 435 ASIVELQVGVNDPKAKPLFSSGLIGRDNSIARHGIHGLYWLYNVNIPGNRLVSGDNTIFF 494

Query: 183 TQPRCTGPFQAIMYDYIRLEAPPPPSSAHPL 213
           TQPR T PFQAIMYDYIRLEAPPPPSSAH L
Sbjct: 495 TQPRSTSPFQAIMYDYIRLEAPPPPSSAHGL 525

[Close]
BLAST of Cucsat.G4655 vs. TAIR 10
Match: AT1G09890.1 (Rhamnogalacturonate lyase family protein )

HSP 1 Score: 326.2 bits (835), Expect = 1.9e-89
Identity = 141/202 (69.80%), Postives = 169/202 (83.66%), Query Frame = 0 

Query: 3   DITYEPPRQGATLWEIGIPDRSAAEFYVPDPNPNYVNKLYLNHPDKFRQYGLWERYSELF 62
           D+ Y+PPR GATLWEIG PDRSAAEFYVPDPNP Y+N LY NHPD+FRQYGLWERY+EL+
Sbjct: 415 DLVYQPPRNGATLWEIGFPDRSAAEFYVPDPNPKYINNLYQNHPDRFRQYGLWERYAELY 474

Query: 63  PDSDLVYTVGVSDYTKDWFFAQVPRKMENGTYKGTTWQVKFELDDVDNQATYKLRVALAS 122
           PD DLVY VG SDY KDWF+AQV RK +N TY+GTTWQ+KFEL ++D   +Y LRVA+AS
Sbjct: 475 PDKDLVYVVGSSDYRKDWFYAQVTRKKDNKTYQGTTWQIKFELKNIDKNHSYTLRVAIAS 534

Query: 123 VSLAELQVGVNEAKAKAVFSSGLIGRDNSIARHGIHGLYWVYNIDIPGNRLVTGNNTIFF 182
            + +ELQ+ VN A A  +F+SGLIGRDNSIARHGIHGLYW++N+++ G++L+ G NT+F 
Sbjct: 535 ATFSELQIRVNNANASPMFTSGLIGRDNSIARHGIHGLYWLFNVEVAGSKLLEGENTLFL 594

Query: 183 TQPRCTGPFQAIMYDYIRLEAP 205
           TQPR T PFQ IMYDYIR EAP
Sbjct: 595 TQPRSTSPFQGIMYDYIRFEAP 616

[Close]
BLAST of Cucsat.G4655 vs. TAIR 10
Match: AT1G09910.1 (Rhamnogalacturonate lyase family protein )

HSP 1 Score: 308.5 bits (789), Expect = 4.1e-84
Identity = 135/206 (65.53%), Postives = 175/206 (84.95%), Query Frame = 0 

Query: 1   MGDITYEPPRQGATLWEIGIPDRSAAEFYVPDPNPNYVNKLYLNHPDKFRQYGLWERYSE 60
           MGDI YEPPR G TLWEIGIPDR A+EF++PDP+P  VN++ ++H D+FRQYGLW++Y++
Sbjct: 470 MGDIVYEPPRDGPTLWEIGIPDRKASEFFIPDPDPTLVNRVLVHHQDRFRQYGLWKKYTD 529

Query: 61  LFPDSDLVYTVGVSDYTKDWFFAQVPRKMENGTYKGTTWQVKFELDDVDNQATYKLRVAL 120
           ++P+ DLVYTVGVSDY +DWFFA VPRK +   ++GTTWQ+ F L+++D +A YKLRVA+
Sbjct: 530 MYPNDDLVYTVGVSDYRRDWFFAHVPRK-KGDVHEGTTWQIIFNLENIDQKANYKLRVAI 589

Query: 121 ASVSLAELQVGVNEAKA-KAVFSSGLIGRDNSIARHGIHGLYWVYNIDIPGNRLVTGNNT 180
           AS +LAELQ+ +N+A+A + +F++GLIGRDNSIARHGIHG+Y +Y ++IPGNRLV G+NT
Sbjct: 590 ASATLAELQIRINDAEAIRPLFTTGLIGRDNSIARHGIHGVYMLYAVNIPGNRLVQGDNT 649

Query: 181 IFFTQPRCTGPFQAIMYDYIRLEAPP 206
           IF  QPRC GPFQ IMYDYIRLE PP
Sbjct: 650 IFLKQPRCNGPFQGIMYDYIRLEGPP 674

[Close]
BLAST of Cucsat.G4655 vs. TAIR 10
Match: AT4G24430.1 (Rhamnogalacturonate lyase family protein )

HSP 1 Score: 302.4 bits (773), Expect = 2.9e-82
Identity = 134/215 (62.33%), Postives = 172/215 (80.00%), Query Frame = 0 

Query: 1   MGDITYEPPRQGATLWEIGIPDRSAAEFYVPDPNPNYVNKLYLNHPDKFRQYGLWERYSE 60
           +G+I YEPPR G T+WEIGIPDRSAAEF+VPDPNP Y+NKLY+ HPD+FRQYGLWERY+E
Sbjct: 432 VGNIVYEPPRDGPTVWEIGIPDRSAAEFFVPDPNPKYINKLYIGHPDRFRQYGLWERYTE 491

Query: 61  LFPDSDLVYTVGVSDYTKDWFFAQVPRKMENGTYKGTTWQVKFELDDVDNQATYKLRVAL 120
           L+P  DLV+T+GVSDY KDWFFA V RKM + TY+ TTWQ+KF+L++V    TYK+R+AL
Sbjct: 492 LYPKEDLVFTIGVSDYKKDWFFAHVTRKMGDDTYQKTTWQIKFKLENVQKSCTYKIRIAL 551

Query: 121 ASVSLAELQVGVNE---AKAKAVFSSGLIGRDNSIARHGIHGLYWVYNIDIPGNRLVTGN 180
           A+ ++AELQV +N+    K   +F++G+IG DN+IARHGIHG+Y +YN+D+P  +LV G+
Sbjct: 552 ATANVAELQVRMNDDDTEKTTPIFTTGVIGHDNAIARHGIHGIYRLYNVDVPSEKLVEGD 611

Query: 181 NTIFFTQP-RCTGPFQAIMYDYIRLEAPPPPSSAH 212
           NT+F TQ    TG F  +MYDYIRLE PP  S +H
Sbjct: 612 NTLFLTQTMTTTGAFNGLMYDYIRLEGPPLDSYSH 646

[Close]
BLAST of Cucsat.G4655 vs. TAIR 10
Match: AT1G09880.1 (Rhamnogalacturonate lyase family protein )

HSP 1 Score: 298.9 bits (764), Expect = 3.3e-81
Identity = 133/207 (64.25%), Postives = 165/207 (79.71%), Query Frame = 0 

Query: 1   MGDITYEPPRQGATLWEIGIPDRSAAEFYVPDPNPNYVNKLYLNHPDKFRQYGLWERYSE 60
           +GD+ YEPPR G+TLWEIG+PDRSAAEFY+PDPNP++VNKLYLNH DK+RQYGLWERYSE
Sbjct: 416 LGDLVYEPPRDGSTLWEIGVPDRSAAEFYIPDPNPSFVNKLYLNHSDKYRQYGLWERYSE 475

Query: 61  LFPDSDLVYTVGVSDYTKDWFFAQVPRKMENGTYKGTTWQVKFELDDVDNQAT--YKLRV 120
           L+PD D+VY V + DY+K+WFF QV RK  NG YKGTTWQ++F+ DD     T  +KLR+
Sbjct: 476 LYPDEDMVYNVDIDDYSKNWFFMQVTRKQANGGYKGTTWQIRFQFDDKMKNVTGNFKLRI 535

Query: 121 ALASVSLAELQVGVNEAKA-KAVFSSGLIGRDNSIARHGIHGLYWVYNIDIPGNRLVTGN 180
           ALA+ ++AELQV VN+  A   +F +  IGRDN+IARHGIHGLYW+Y++++P   L  GN
Sbjct: 536 ALATSNVAELQVRVNDLSADPPLFRTEQIGRDNTIARHGIHGLYWLYSVNVPAASLHVGN 595

Query: 181 NTIFFTQPRCTGPFQAIMYDYIRLEAP 205
           NTI+ TQ   T PFQ +MYDYIRLE P
Sbjct: 596 NTIYLTQALATSPFQGLMYDYIRLEYP 622

[Close]
BLAST of Cucsat.G4655 vs. TAIR 10
Match: AT2G22620.1 (Rhamnogalacturonate lyase family protein )

HSP 1 Score: 278.9 bits (712), Expect = 3.5e-75
Identity = 124/205 (60.49%), Postives = 160/205 (78.05%), Query Frame = 0 

Query: 1   MGDITYEPPRQGATLWEIGIPDRSAAEFYVPDPNPNYVNKLYLNH-PDKFRQYGLWERYS 60
           +G + YEPPR G TLWEIG+PDR+A EFY+PDP P  +NKLY+N   D+FRQYGLW+RY+
Sbjct: 470 VGPLVYEPPRNGPTLWEIGVPDRTAGEFYIPDPYPTLMNKLYVNPLQDRFRQYGLWDRYA 529

Query: 61  ELFPDSDLVYTVGVSDYTKDWFFAQVPRKMENGTYKGTTWQVKFELDDVDNQATYKLRVA 120
           +L+P +DLVYT+GVSDY  DWFFA V R + N TY+ TTWQ+ F L +V+    Y LR+A
Sbjct: 530 DLYPQNDLVYTIGVSDYRSDWFFAHVARNVGNDTYQPTTWQIIFNLKNVNRIGRYTLRIA 589

Query: 121 LASVSLAELQVGVNEAKAKAVFSSGLIGRDNSIARHGIHGLYWVYNIDIPGNRLVTGNNT 180
           LAS + +ELQ+ +N+ K+ A+F++G IG+DN+IARHGIHGLY +Y+ID+ GN L  G+NT
Sbjct: 590 LASAADSELQIRINDPKSDAIFTTGFIGKDNAIARHGIHGLYRLYSIDVAGNLLSVGDNT 649

Query: 181 IFFTQPRCTGPFQAIMYDYIRLEAP 205
           IF TQ R   PFQ IMYDYIRLE+P
Sbjct: 650 IFLTQTRSRTPFQGIMYDYIRLESP 674

The following BLAST results are available for this feature:
BLAST of Cucsat.G4655 vs.
Match NameE-valueIdentityDescription
BLAST of Cucsat.G4655 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_031736466.11.23e-154100.00probable rhamnogalacturonate lyase B isoform X2 [Cucumis sativus][more]
XP_004152608.24.71e-153100.00probable rhamnogalacturonate lyase B isoform X1 [Cucumis sativus] >KGN62737.1 hy... [more]
XP_008444896.17.31e-14795.83PREDICTED: probable rhamnogalacturonate lyase B isoform X2 [Cucumis melo][more]
XP_008444895.13.17e-14695.83PREDICTED: probable rhamnogalacturonate lyase B isoform X1 [Cucumis melo][more]
KAA0065109.15.13e-14595.37putative rhamnogalacturonate lyase B isoform X1 [Cucumis melo var. makuwa][more]
BLAST of Cucsat.G4655 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LPL02.28e-153100.00Rhamnogalacturonan endolyase OS=Cucumis sativus OX=3659 GN=Csa_2G370370 PE=3 SV=... [more]
A0A1S3BAY73.54e-14795.83Rhamnogalacturonan endolyase OS=Cucumis melo OX=3656 GN=LOC103488110 PE=3 SV=1[more]
A0A1S3BCA71.54e-14695.83Rhamnogalacturonan endolyase OS=Cucumis melo OX=3656 GN=LOC103488110 PE=3 SV=1[more]
A0A5A7VI092.48e-14595.37Rhamnogalacturonan endolyase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sca... [more]
A0A6J1KJU82.37e-13487.68Rhamnogalacturonan endolyase OS=Cucurbita maxima OX=3661 GN=LOC111495919 PE=3 SV... [more]
BLAST of Cucsat.G4655 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G09890.11.9e-8969.80Rhamnogalacturonate lyase family protein [more]
AT1G09910.14.1e-8465.53Rhamnogalacturonate lyase family protein [more]
AT4G24430.12.9e-8262.33Rhamnogalacturonate lyase family protein [more]
AT1G09880.13.3e-8164.25Rhamnogalacturonate lyase family protein [more]
AT2G22620.13.5e-7560.49Rhamnogalacturonate lyase family protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014718Glycoside hydrolase-type carbohydrate-bindingGENE3D2.70.98.10coord: 7..291
e-value: 1.4E-10
score: 43.0
NoneNo IPR availableGENE3D2.60.40.1120coord: 331..413
e-value: 6.5E-8
score: 34.7
NoneNo IPR availablePANTHERPTHR32018RHAMNOGALACTURONATE LYASE FAMILY PROTEINcoord: 1..421
NoneNo IPR availablePANTHERPTHR32018:SF8RHAMNOGALACTURONATE LYASE FAMILY PROTEINcoord: 1..421
NoneNo IPR availableCDDcd10320RGL4_Ncoord: 13..293
e-value: 1.2368E-81
score: 250.384
IPR010325Rhamnogalacturonate lyasePFAMPF06045Rhamnogal_lyasecoord: 11..201
e-value: 2.8E-90
score: 301.4
IPR029413Rhamnogalacturonan lyase, domain IIPFAMPF14686fn3_3coord: 355..418
e-value: 3.3E-23
score: 81.3
IPR029413Rhamnogalacturonan lyase, domain IICDDcd10316RGL4_Mcoord: 332..412
e-value: 2.51209E-29
score: 107.72
IPR013784Carbohydrate-binding-like foldSUPERFAMILY49452Starch-binding domain-likecoord: 355..418
IPR011013Galactose mutarotase-like domain superfamilySUPERFAMILY74650Galactose mutarotase-likecoord: 19..292

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsat.G4655.T1Cucsat.G4655.T1mRNA
Cucsat.G4655.T10Cucsat.G4655.T10mRNA
Cucsat.G4655.T12Cucsat.G4655.T12mRNA
Cucsat.G4655.T14Cucsat.G4655.T14mRNA
Cucsat.G4655.T3Cucsat.G4655.T3mRNA
Cucsat.G4655.T7Cucsat.G4655.T7mRNA
Cucsat.G4655.T6Cucsat.G4655.T6mRNA
Cucsat.G4655.T9Cucsat.G4655.T9mRNA
Cucsat.G4655.T8Cucsat.G4655.T8mRNA
Cucsat.G4655.T2Cucsat.G4655.T2mRNA
Cucsat.G4655.T5Cucsat.G4655.T5mRNA
Cucsat.G4655.T11Cucsat.G4655.T11mRNA
Cucsat.G4655.T4Cucsat.G4655.T4mRNA
Cucsat.G4655.T13Cucsat.G4655.T13mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0005975 carbohydrate metabolic process
cellular_component GO:0005576 extracellular region
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0030246 carbohydrate binding
molecular_function GO:0102210 rhamnogalacturonan endolyase activity
molecular_function GO:0003824 catalytic activity