Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTGAGTCGGGCCAGGTCCCTCTTCCACTGCACTTCCGTGGTGGTAGCGGAGGAAAGGCACAAGGATTCGGGACTCCATCATCATATTGCCAGCCTCGTAGATCCTTGCTGGAACAAGGCAAGCACTAAAGGGGAGCCTTGGAGGAATGGTAAGGCATGCAATCTTGCCTTCCATAAAGCTTGGGGAAGCCTGCGTGCCTATGTTGTCAGTCAAAGAAGACCAAAGTATGTCTG
mRNA sequence
ATGGTGAGTCGGGCCAGGTCCCTCTTCCACTGCACTTCCGTGGTGGTAGCGGAGGAAAGGCACAAGGATTCGGGACTCCATCATCATATTGCCAGCCTCGTAGATCCTTGCTGGAACAAGGCAAGCACTAAAGGGGAGCCTTGGAGGAATGGTAAGGCATGCAATCTTGCCTTCCATAAAGCTTGGGGAAGCCTGCGTGCCTATGTTGTCAGTCAAAGAAGACCAAAGTATGTCTG
Coding sequence (CDS)
ATGGTGAGTCGGGCCAGGTCCCTCTTCCACTGCACTTCCGTGGTGGTAGCGGAGGAAAGGCACAAGGATTCGGGACTCCATCATCATATTGCCAGCCTCGTAGATCCTTGCTGGAACAAGGCAAGCACTAAAGGGGAGCCTTGGAGGAATGGTAAGGCATGCAATCTTGCCTTCCATAAAGCTTGGGGAAGCCTGCGTGCCTATGTTGTCAGTCAAAGAAGACCAAAGTATGTC
Protein sequence
MVSRARSLFHCTSVVVAEERHKDSGLHHHIASLVDPCWNKASTKGEPWRNGKACNLAFHKAWGSLRAYVVSQRRPKYV
Homology
BLAST of MELO3C006985 vs. NCBI nr
Match:
TYK19508.1 (hypothetical protein E5676_scaffold79340G00010 [Cucumis melo var. makuwa])
HSP 1 Score: 171.0 bits (432), Expect = 4.0e-39
Identity = 78/78 (100.00%), Postives = 78/78 (100.00%), Query Frame = 0
Query: 1 MVSRARSLFHCTSVVVAEERHKDSGLHHHIASLVDPCWNKASTKGEPWRNGKACNLAFHK 60
MVSRARSLFHCTSVVVAEERHKDSGLHHHIASLVDPCWNKASTKGEPWRNGKACNLAFHK
Sbjct: 86 MVSRARSLFHCTSVVVAEERHKDSGLHHHIASLVDPCWNKASTKGEPWRNGKACNLAFHK 145
Query: 61 AWGSLRAYVVSQRRPKYV 79
AWGSLRAYVVSQRRPKYV
Sbjct: 146 AWGSLRAYVVSQRRPKYV 163
BLAST of MELO3C006985 vs. NCBI nr
Match:
TYK02125.1 (hypothetical protein E5676_scaffold83326G00020 [Cucumis melo var. makuwa])
HSP 1 Score: 64.3 bits (155), Expect = 5.3e-07
Identity = 37/84 (44.05%), Postives = 49/84 (58.33%), Query Frame = 0
Query: 1 MVSRARSLFHCTSVVVAEERHKD-SGLHHHIASL-VDPCWNKASTK----GEPWRNGKAC 60
M R R LF C +VVA+ERH+D +HHHIA L + N+A K E W G+ C
Sbjct: 177 MEERIRKLFDCVCIVVAKERHQDGEKIHHHIAVLNENASKNQAIAKIREALEEW-EGRQC 236
Query: 61 NLAFHKAWGSLRAYVVSQRRPKYV 79
+++FHK W SL AY+ Q + YV
Sbjct: 237 DVSFHKTWKSLCAYITKQDKAPYV 259
BLAST of MELO3C006985 vs. NCBI nr
Match:
KAA0036662.1 (hypothetical protein E6C27_scaffold43296G00060 [Cucumis melo var. makuwa])
HSP 1 Score: 64.3 bits (155), Expect = 5.3e-07
Identity = 37/84 (44.05%), Postives = 49/84 (58.33%), Query Frame = 0
Query: 1 MVSRARSLFHCTSVVVAEERHKD-SGLHHHIASL-VDPCWNKASTK----GEPWRNGKAC 60
M R R LF C +VVA+ERH+D +HHHIA L + N+A K E W G+ C
Sbjct: 1 MEERIRKLFDCVCIVVAKERHQDGEKIHHHIAVLNENASKNQAIAKIREALEEW-EGRQC 60
Query: 61 NLAFHKAWGSLRAYVVSQRRPKYV 79
+++FHK W SL AY+ Q + YV
Sbjct: 61 DVSFHKTWKSLCAYITKQDKAPYV 83
BLAST of MELO3C006985 vs. NCBI nr
Match:
TYK27132.1 (hypothetical protein E5676_scaffold78976G00020 [Cucumis melo var. makuwa])
HSP 1 Score: 63.2 bits (152), Expect = 1.2e-06
Identity = 28/82 (34.15%), Postives = 48/82 (58.54%), Query Frame = 0
Query: 3 SRARSLFHCTSVVVAEERHKDSG--LHHHIASLVDPCWNKASTK----GEPWRNGKACNL 62
+R ++LF C ++V+A+E+HK+ G HHH+ L + K +TK P G+ C +
Sbjct: 70 ARIQALFRCKAIVIAQEKHKEEGEQRHHHVGVLKENAHRKKATKKIRESFPEWEGRQCKV 129
Query: 63 AFHKAWGSLRAYVVSQRRPKYV 79
+FHK+W ++ YV + + YV
Sbjct: 130 SFHKSWNTICTYVTKEDKEPYV 151
BLAST of MELO3C006985 vs. NCBI nr
Match:
QIQ59661.1 (hypothetical protein [Trebouxia sp. A1-2])
HSP 1 Score: 62.8 bits (151), Expect = 1.5e-06
Identity = 30/81 (37.04%), Postives = 47/81 (58.02%), Query Frame = 0
Query: 1 MVSRARSLFHCTSVVVAEERHKDSGLHHHIASLVDPCWNKASTK----GEPWRNGKACNL 60
+VS+ RSLF+C S+++A+E HKD G H+H+ L D + K P G+ N+
Sbjct: 29 VVSKCRSLFNCESIILAKELHKDKGYHYHVGILNDTASYHTAAKLLRSIFPEFEGRQLNV 88
Query: 61 AFHKAWGSLRAYVVSQRRPKY 78
+FHK+W ++ YV Q + Y
Sbjct: 89 SFHKSWNTICEYVFKQDQDPY 109
BLAST of MELO3C006985 vs. ExPASy TrEMBL
Match:
A0A5D3D7H4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold79340G00010 PE=4 SV=1)
HSP 1 Score: 171.0 bits (432), Expect = 1.9e-39
Identity = 78/78 (100.00%), Postives = 78/78 (100.00%), Query Frame = 0
Query: 1 MVSRARSLFHCTSVVVAEERHKDSGLHHHIASLVDPCWNKASTKGEPWRNGKACNLAFHK 60
MVSRARSLFHCTSVVVAEERHKDSGLHHHIASLVDPCWNKASTKGEPWRNGKACNLAFHK
Sbjct: 86 MVSRARSLFHCTSVVVAEERHKDSGLHHHIASLVDPCWNKASTKGEPWRNGKACNLAFHK 145
Query: 61 AWGSLRAYVVSQRRPKYV 79
AWGSLRAYVVSQRRPKYV
Sbjct: 146 AWGSLRAYVVSQRRPKYV 163
BLAST of MELO3C006985 vs. ExPASy TrEMBL
Match:
A0A5A7SZR2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold43296G00060 PE=4 SV=1)
HSP 1 Score: 64.3 bits (155), Expect = 2.6e-07
Identity = 37/84 (44.05%), Postives = 49/84 (58.33%), Query Frame = 0
Query: 1 MVSRARSLFHCTSVVVAEERHKD-SGLHHHIASL-VDPCWNKASTK----GEPWRNGKAC 60
M R R LF C +VVA+ERH+D +HHHIA L + N+A K E W G+ C
Sbjct: 1 MEERIRKLFDCVCIVVAKERHQDGEKIHHHIAVLNENASKNQAIAKIREALEEW-EGRQC 60
Query: 61 NLAFHKAWGSLRAYVVSQRRPKYV 79
+++FHK W SL AY+ Q + YV
Sbjct: 61 DVSFHKTWKSLCAYITKQDKAPYV 83
BLAST of MELO3C006985 vs. ExPASy TrEMBL
Match:
A0A5D3BSH0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold83326G00020 PE=4 SV=1)
HSP 1 Score: 64.3 bits (155), Expect = 2.6e-07
Identity = 37/84 (44.05%), Postives = 49/84 (58.33%), Query Frame = 0
Query: 1 MVSRARSLFHCTSVVVAEERHKD-SGLHHHIASL-VDPCWNKASTK----GEPWRNGKAC 60
M R R LF C +VVA+ERH+D +HHHIA L + N+A K E W G+ C
Sbjct: 177 MEERIRKLFDCVCIVVAKERHQDGEKIHHHIAVLNENASKNQAIAKIREALEEW-EGRQC 236
Query: 61 NLAFHKAWGSLRAYVVSQRRPKYV 79
+++FHK W SL AY+ Q + YV
Sbjct: 237 DVSFHKTWKSLCAYITKQDKAPYV 259
BLAST of MELO3C006985 vs. ExPASy TrEMBL
Match:
A0A5D3DUF0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold78976G00020 PE=4 SV=1)
HSP 1 Score: 63.2 bits (152), Expect = 5.7e-07
Identity = 28/82 (34.15%), Postives = 48/82 (58.54%), Query Frame = 0
Query: 3 SRARSLFHCTSVVVAEERHKDSG--LHHHIASLVDPCWNKASTK----GEPWRNGKACNL 62
+R ++LF C ++V+A+E+HK+ G HHH+ L + K +TK P G+ C +
Sbjct: 70 ARIQALFRCKAIVIAQEKHKEEGEQRHHHVGVLKENAHRKKATKKIRESFPEWEGRQCKV 129
Query: 63 AFHKAWGSLRAYVVSQRRPKYV 79
+FHK+W ++ YV + + YV
Sbjct: 130 SFHKSWNTICTYVTKEDKEPYV 151
BLAST of MELO3C006985 vs. ExPASy TrEMBL
Match:
A0A6G9L4C7 (Uncharacterized protein OS=Trebouxia sp. A1-2 OX=2608996 GN=orf380 PE=4 SV=1)
HSP 1 Score: 62.8 bits (151), Expect = 7.4e-07
Identity = 30/81 (37.04%), Postives = 47/81 (58.02%), Query Frame = 0
Query: 1 MVSRARSLFHCTSVVVAEERHKDSGLHHHIASLVDPCWNKASTK----GEPWRNGKACNL 60
+VS+ RSLF+C S+++A+E HKD G H+H+ L D + K P G+ N+
Sbjct: 29 VVSKCRSLFNCESIILAKELHKDKGYHYHVGILNDTASYHTAAKLLRSIFPEFEGRQLNV 88
Query: 61 AFHKAWGSLRAYVVSQRRPKY 78
+FHK+W ++ YV Q + Y
Sbjct: 89 SFHKSWNTICEYVFKQDQDPY 109
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| TYK19508.1 | 4.0e-39 | 100.00 | hypothetical protein E5676_scaffold79340G00010 [Cucumis melo var. makuwa] | [more] |
| TYK02125.1 | 5.3e-07 | 44.05 | hypothetical protein E5676_scaffold83326G00020 [Cucumis melo var. makuwa] | [more] |
| KAA0036662.1 | 5.3e-07 | 44.05 | hypothetical protein E6C27_scaffold43296G00060 [Cucumis melo var. makuwa] | [more] |
| TYK27132.1 | 1.2e-06 | 34.15 | hypothetical protein E5676_scaffold78976G00020 [Cucumis melo var. makuwa] | [more] |
| QIQ59661.1 | 1.5e-06 | 37.04 | hypothetical protein [Trebouxia sp. A1-2] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A5D3D7H4 | 1.9e-39 | 100.00 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
| A0A5A7SZR2 | 2.6e-07 | 44.05 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... | [more] |
| A0A5D3BSH0 | 2.6e-07 | 44.05 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
| A0A5D3DUF0 | 5.7e-07 | 34.15 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
| A0A6G9L4C7 | 7.4e-07 | 37.04 | Uncharacterized protein OS=Trebouxia sp. A1-2 OX=2608996 GN=orf380 PE=4 SV=1 | [more] |
| Match Name | E-value | Identity | Description | |
|---|
