MELO3C006985 (gene) Melon (DHL92) v4

Overview


Name	MELO3C006985
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	Unknown protein
Location	chr06: 8144900 .. 8145135 (-)
RNA-Seq Expression	MELO3C006985
Synteny	MELO3C006985

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTGAGTCGGGCCAGGTCCCTCTTCCACTGCACTTCCGTGGTGGTAGCGGAGGAAAGGCACAAGGATTCGGGACTCCATCATCATATTGCCAGCCTCGTAGATCCTTGCTGGAACAAGGCAAGCACTAAAGGGGAGCCTTGGAGGAATGGTAAGGCATGCAATCTTGCCTTCCATAAAGCTTGGGGAAGCCTGCGTGCCTATGTTGTCAGTCAAAGAAGACCAAAGTATGTCTG

mRNA sequence

ATGGTGAGTCGGGCCAGGTCCCTCTTCCACTGCACTTCCGTGGTGGTAGCGGAGGAAAGGCACAAGGATTCGGGACTCCATCATCATATTGCCAGCCTCGTAGATCCTTGCTGGAACAAGGCAAGCACTAAAGGGGAGCCTTGGAGGAATGGTAAGGCATGCAATCTTGCCTTCCATAAAGCTTGGGGAAGCCTGCGTGCCTATGTTGTCAGTCAAAGAAGACCAAAGTATGTCTG

Coding sequence (CDS)

ATGGTGAGTCGGGCCAGGTCCCTCTTCCACTGCACTTCCGTGGTGGTAGCGGAGGAAAGGCACAAGGATTCGGGACTCCATCATCATATTGCCAGCCTCGTAGATCCTTGCTGGAACAAGGCAAGCACTAAAGGGGAGCCTTGGAGGAATGGTAAGGCATGCAATCTTGCCTTCCATAAAGCTTGGGGAAGCCTGCGTGCCTATGTTGTCAGTCAAAGAAGACCAAAGTATGTC

Protein sequence

MVSRARSLFHCTSVVVAEERHKDSGLHHHIASLVDPCWNKASTKGEPWRNGKACNLAFHKAWGSLRAYVVSQRRPKYV

Homology

[Close]

BLAST of MELO3C006985 vs. NCBI nr
Match: TYK19508.1 (hypothetical protein E5676_scaffold79340G00010 [Cucumis melo var. makuwa])

HSP 1 Score: 171.0 bits (432), Expect = 4.0e-39
Identity = 78/78 (100.00%), Postives = 78/78 (100.00%), Query Frame = 0


Query: 1   MVSRARSLFHCTSVVVAEERHKDSGLHHHIASLVDPCWNKASTKGEPWRNGKACNLAFHK 60
           MVSRARSLFHCTSVVVAEERHKDSGLHHHIASLVDPCWNKASTKGEPWRNGKACNLAFHK
Sbjct: 86  MVSRARSLFHCTSVVVAEERHKDSGLHHHIASLVDPCWNKASTKGEPWRNGKACNLAFHK 145

Query: 61  AWGSLRAYVVSQRRPKYV 79
           AWGSLRAYVVSQRRPKYV
Sbjct: 146 AWGSLRAYVVSQRRPKYV 163

[Close]

BLAST of MELO3C006985 vs. NCBI nr
Match: TYK02125.1 (hypothetical protein E5676_scaffold83326G00020 [Cucumis melo var. makuwa])

HSP 1 Score: 64.3 bits (155), Expect = 5.3e-07
Identity = 37/84 (44.05%), Postives = 49/84 (58.33%), Query Frame = 0


Query: 1   MVSRARSLFHCTSVVVAEERHKD-SGLHHHIASL-VDPCWNKASTK----GEPWRNGKAC 60
           M  R R LF C  +VVA+ERH+D   +HHHIA L  +   N+A  K     E W  G+ C
Sbjct: 177 MEERIRKLFDCVCIVVAKERHQDGEKIHHHIAVLNENASKNQAIAKIREALEEW-EGRQC 236

Query: 61  NLAFHKAWGSLRAYVVSQRRPKYV 79
           +++FHK W SL AY+  Q +  YV
Sbjct: 237 DVSFHKTWKSLCAYITKQDKAPYV 259

[Close]

BLAST of MELO3C006985 vs. NCBI nr
Match: KAA0036662.1 (hypothetical protein E6C27_scaffold43296G00060 [Cucumis melo var. makuwa])

HSP 1 Score: 64.3 bits (155), Expect = 5.3e-07
Identity = 37/84 (44.05%), Postives = 49/84 (58.33%), Query Frame = 0


Query: 1  MVSRARSLFHCTSVVVAEERHKD-SGLHHHIASL-VDPCWNKASTK----GEPWRNGKAC 60
          M  R R LF C  +VVA+ERH+D   +HHHIA L  +   N+A  K     E W  G+ C
Sbjct: 1  MEERIRKLFDCVCIVVAKERHQDGEKIHHHIAVLNENASKNQAIAKIREALEEW-EGRQC 60

Query: 61 NLAFHKAWGSLRAYVVSQRRPKYV 79
          +++FHK W SL AY+  Q +  YV
Sbjct: 61 DVSFHKTWKSLCAYITKQDKAPYV 83

[Close]

BLAST of MELO3C006985 vs. NCBI nr
Match: TYK27132.1 (hypothetical protein E5676_scaffold78976G00020 [Cucumis melo var. makuwa])

HSP 1 Score: 63.2 bits (152), Expect = 1.2e-06
Identity = 28/82 (34.15%), Postives = 48/82 (58.54%), Query Frame = 0


Query: 3   SRARSLFHCTSVVVAEERHKDSG--LHHHIASLVDPCWNKASTK----GEPWRNGKACNL 62
           +R ++LF C ++V+A+E+HK+ G   HHH+  L +    K +TK      P   G+ C +
Sbjct: 70  ARIQALFRCKAIVIAQEKHKEEGEQRHHHVGVLKENAHRKKATKKIRESFPEWEGRQCKV 129

Query: 63  AFHKAWGSLRAYVVSQRRPKYV 79
           +FHK+W ++  YV  + +  YV
Sbjct: 130 SFHKSWNTICTYVTKEDKEPYV 151

[Close]

BLAST of MELO3C006985 vs. NCBI nr
Match: QIQ59661.1 (hypothetical protein [Trebouxia sp. A1-2])

HSP 1 Score: 62.8 bits (151), Expect = 1.5e-06
Identity = 30/81 (37.04%), Postives = 47/81 (58.02%), Query Frame = 0


Query: 1   MVSRARSLFHCTSVVVAEERHKDSGLHHHIASLVDPCWNKASTK----GEPWRNGKACNL 60
           +VS+ RSLF+C S+++A+E HKD G H+H+  L D      + K      P   G+  N+
Sbjct: 29  VVSKCRSLFNCESIILAKELHKDKGYHYHVGILNDTASYHTAAKLLRSIFPEFEGRQLNV 88

Query: 61  AFHKAWGSLRAYVVSQRRPKY 78
           +FHK+W ++  YV  Q +  Y
Sbjct: 89  SFHKSWNTICEYVFKQDQDPY 109

[Close]

BLAST of MELO3C006985 vs. ExPASy TrEMBL
Match: A0A5D3D7H4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold79340G00010 PE=4 SV=1)

HSP 1 Score: 171.0 bits (432), Expect = 1.9e-39
Identity = 78/78 (100.00%), Postives = 78/78 (100.00%), Query Frame = 0


Query: 1   MVSRARSLFHCTSVVVAEERHKDSGLHHHIASLVDPCWNKASTKGEPWRNGKACNLAFHK 60
           MVSRARSLFHCTSVVVAEERHKDSGLHHHIASLVDPCWNKASTKGEPWRNGKACNLAFHK
Sbjct: 86  MVSRARSLFHCTSVVVAEERHKDSGLHHHIASLVDPCWNKASTKGEPWRNGKACNLAFHK 145

Query: 61  AWGSLRAYVVSQRRPKYV 79
           AWGSLRAYVVSQRRPKYV
Sbjct: 146 AWGSLRAYVVSQRRPKYV 163

[Close]

BLAST of MELO3C006985 vs. ExPASy TrEMBL
Match: A0A5A7SZR2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold43296G00060 PE=4 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 2.6e-07
Identity = 37/84 (44.05%), Postives = 49/84 (58.33%), Query Frame = 0


Query: 1  MVSRARSLFHCTSVVVAEERHKD-SGLHHHIASL-VDPCWNKASTK----GEPWRNGKAC 60
          M  R R LF C  +VVA+ERH+D   +HHHIA L  +   N+A  K     E W  G+ C
Sbjct: 1  MEERIRKLFDCVCIVVAKERHQDGEKIHHHIAVLNENASKNQAIAKIREALEEW-EGRQC 60

Query: 61 NLAFHKAWGSLRAYVVSQRRPKYV 79
          +++FHK W SL AY+  Q +  YV
Sbjct: 61 DVSFHKTWKSLCAYITKQDKAPYV 83

[Close]

BLAST of MELO3C006985 vs. ExPASy TrEMBL
Match: A0A5D3BSH0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold83326G00020 PE=4 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 2.6e-07
Identity = 37/84 (44.05%), Postives = 49/84 (58.33%), Query Frame = 0


Query: 1   MVSRARSLFHCTSVVVAEERHKD-SGLHHHIASL-VDPCWNKASTK----GEPWRNGKAC 60
           M  R R LF C  +VVA+ERH+D   +HHHIA L  +   N+A  K     E W  G+ C
Sbjct: 177 MEERIRKLFDCVCIVVAKERHQDGEKIHHHIAVLNENASKNQAIAKIREALEEW-EGRQC 236

Query: 61  NLAFHKAWGSLRAYVVSQRRPKYV 79
           +++FHK W SL AY+  Q +  YV
Sbjct: 237 DVSFHKTWKSLCAYITKQDKAPYV 259

[Close]

BLAST of MELO3C006985 vs. ExPASy TrEMBL
Match: A0A5D3DUF0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold78976G00020 PE=4 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 5.7e-07
Identity = 28/82 (34.15%), Postives = 48/82 (58.54%), Query Frame = 0


Query: 3   SRARSLFHCTSVVVAEERHKDSG--LHHHIASLVDPCWNKASTK----GEPWRNGKACNL 62
           +R ++LF C ++V+A+E+HK+ G   HHH+  L +    K +TK      P   G+ C +
Sbjct: 70  ARIQALFRCKAIVIAQEKHKEEGEQRHHHVGVLKENAHRKKATKKIRESFPEWEGRQCKV 129

Query: 63  AFHKAWGSLRAYVVSQRRPKYV 79
           +FHK+W ++  YV  + +  YV
Sbjct: 130 SFHKSWNTICTYVTKEDKEPYV 151

[Close]

BLAST of MELO3C006985 vs. ExPASy TrEMBL
Match: A0A6G9L4C7 (Uncharacterized protein OS=Trebouxia sp. A1-2 OX=2608996 GN=orf380 PE=4 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 7.4e-07
Identity = 30/81 (37.04%), Postives = 47/81 (58.02%), Query Frame = 0


Query: 1   MVSRARSLFHCTSVVVAEERHKDSGLHHHIASLVDPCWNKASTK----GEPWRNGKACNL 60
           +VS+ RSLF+C S+++A+E HKD G H+H+  L D      + K      P   G+  N+
Sbjct: 29  VVSKCRSLFNCESIILAKELHKDKGYHYHVGILNDTASYHTAAKLLRSIFPEFEGRQLNV 88

Query: 61  AFHKAWGSLRAYVVSQRRPKY 78
           +FHK+W ++  YV  Q +  Y
Sbjct: 89  SFHKSWNTICEYVFKQDQDPY 109

The following BLAST results are available for this feature:

BLAST of MELO3C006985 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK19508.1	4.0e-39	100.00	hypothetical protein E5676_scaffold79340G00010 [Cucumis melo var. makuwa]	[more]
TYK02125.1	5.3e-07	44.05	hypothetical protein E5676_scaffold83326G00020 [Cucumis melo var. makuwa]	[more]
KAA0036662.1	5.3e-07	44.05	hypothetical protein E6C27_scaffold43296G00060 [Cucumis melo var. makuwa]	[more]
TYK27132.1	1.2e-06	34.15	hypothetical protein E5676_scaffold78976G00020 [Cucumis melo var. makuwa]	[more]
QIQ59661.1	1.5e-06	37.04	hypothetical protein [Trebouxia sp. A1-2]	[more]

BLAST of MELO3C006985 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MELO3C006985 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3D7H4	1.9e-39	100.00	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7SZR2	2.6e-07	44.05	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5D3BSH0	2.6e-07	44.05	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5D3DUF0	5.7e-07	34.15	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A6G9L4C7	7.4e-07	37.04	Uncharacterized protein OS=Trebouxia sp. A1-2 OX=2608996 GN=orf380 PE=4 SV=1	[more]

BLAST of MELO3C006985 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C006985.1	MELO3C006985.1	mRNA