Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCATTTGTGCAGAGAGATAGTTTGGGACACACCAAATGACTGTACACAATATGCTAAACTTGAAGAGGCTGACCGTGTTTATGACTTCCTTGCAGGACTTAATCCCAAATTTGATAATGTTTGTGGTCGTATACTCGGACAAAGACCTCTTCCCTCCCTAATGGAAGTTTGTTTTGAAGTCCGCCTGGAAGAGGATCGCACTAATGCCATGGGTGTATTGACTACCCCTACCATTGACTCTGCTGCCTTTAGCGCTCGGTTCTCAAATCATGACAGTGACAAGAATAATGGGAAGTCAATTCCTGCGTGTGAGCACTGCAAGAAACAATGGCACACCAAGGATTAGTGTTGGAAACTCCACGGTCGTCCCTCAGGAGGTAAGA
mRNA sequence
ATGCATTTGTGCAGAGAGATAGTTTGGGACACACCAAATGACTGTACACAATATGCTAAACTTGAAGAGGCTGACCGTGTTTATGACTTCCTTGCAGGACTTAATCCCAAATTTGATAATGTTTGTGGTCGTATACTCGGACAAAGACCTCTTCCCTCCCTAATGGAAGTTTGTTTTGAAGTCCGCCTGGAAGAGGATCGCACTAATGCCATGGGTGTATTGACTACCCCTACCATTGACTCTGCTGCCTTTAGCGCTCGGTTCTCAAATCATGACAGTGACAAGAATAATGGGAAGTCAATTCCTGCGTGTGAGCACTGCAAGAAACAATGGCACACCAAGGATTAGTGTTGGAAACTCCACGGTCGTCCCTCAGGAGGTAAGA
Coding sequence (CDS)
ATGCATTTGTGCAGAGAGATAGTTTGGGACACACCAAATGACTGTACACAATATGCTAAACTTGAAGAGGCTGACCGTGTTTATGACTTCCTTGCAGGACTTAATCCCAAATTTGATAATGTTTGTGGTCGTATACTCGGACAAAGACCTCTTCCCTCCCTAATGGAAGTTTGTTTTGAAGTCCGCCTGGAAGAGGATCGCACTAATGCCATGGGTGTATTGACTACCCCTACCATTGACTCTGCTGCCTTTAGCGCTCGGTTCTCAAATCATGACAGTGACAAGAATAATGGGAAGTCAATTCCTGCGTGTGAGCACTGCAAGAAACAATGGCACACCAAGGATTAG
Protein sequence
MHLCREIVWDTPNDCTQYAKLEEADRVYDFLAGLNPKFDNVCGRILGQRPLPSLMEVCFEVRLEEDRTNAMGVLTTPTIDSAAFSARFSNHDSDKNNGKSIPACEHCKKQWHTKD
Homology
BLAST of MELO3C028461 vs. NCBI nr
Match:
TYJ99952.1 (Beta-galactosidase [Cucumis melo var. makuwa] >TYK02395.1 Beta-galactosidase [Cucumis melo var. makuwa])
HSP 1 Score: 236.9 bits (603), Expect = 8.8e-59
Identity = 110/115 (95.65%), Postives = 110/115 (95.65%), Query Frame = 0
Query: 1 MHLCREIVWDTPNDCTQYAKLEEADRVYDFLAGLNPKFDNVCGRILGQRPLPSLMEVCFE 60
M LCRE VWDTPND TQYAKLEEADRVYDFLAGLNPKFDNVCGRILGQRPLPSLMEVCFE
Sbjct: 294 MDLCRETVWDTPNDSTQYAKLEEADRVYDFLAGLNPKFDNVCGRILGQRPLPSLMEVCFE 353
Query: 61 VRLEEDRTNAMGVLTTPTIDSAAFSARFSNHDSDKNNGKSIPACEHCKKQWHTKD 116
VRLEEDRTNAMGVLTTPTIDSAAFSAR SNHDSDKNNGKSIP CEHCKKQWHTKD
Sbjct: 354 VRLEEDRTNAMGVLTTPTIDSAAFSARSSNHDSDKNNGKSIPVCEHCKKQWHTKD 408
BLAST of MELO3C028461 vs. NCBI nr
Match:
KAA0031941.1 (Beta-galactosidase [Cucumis melo var. makuwa])
HSP 1 Score: 236.9 bits (603), Expect = 8.8e-59
Identity = 110/115 (95.65%), Postives = 110/115 (95.65%), Query Frame = 0
Query: 1 MHLCREIVWDTPNDCTQYAKLEEADRVYDFLAGLNPKFDNVCGRILGQRPLPSLMEVCFE 60
M LCRE VWDTPND TQYAKLEEADRVYDFLAGLNPKFDNVCGRILGQRPLPSLMEVCFE
Sbjct: 294 MDLCRETVWDTPNDSTQYAKLEEADRVYDFLAGLNPKFDNVCGRILGQRPLPSLMEVCFE 353
Query: 61 VRLEEDRTNAMGVLTTPTIDSAAFSARFSNHDSDKNNGKSIPACEHCKKQWHTKD 116
VRLEEDRTNAMGVLTTPTIDSAAFSAR SNHDSDKNNGKSIP CEHCKKQWHTKD
Sbjct: 354 VRLEEDRTNAMGVLTTPTIDSAAFSARSSNHDSDKNNGKSIPVCEHCKKQWHTKD 408
BLAST of MELO3C028461 vs. NCBI nr
Match:
TYK08054.1 (Beta-galactosidase [Cucumis melo var. makuwa])
HSP 1 Score: 236.9 bits (603), Expect = 8.8e-59
Identity = 110/115 (95.65%), Postives = 110/115 (95.65%), Query Frame = 0
Query: 1 MHLCREIVWDTPNDCTQYAKLEEADRVYDFLAGLNPKFDNVCGRILGQRPLPSLMEVCFE 60
M LCRE VWDTPND TQYAKLEEADRVYDFLAGLNPKFDNVCGRILGQRPLPSLMEVCFE
Sbjct: 294 MDLCRETVWDTPNDSTQYAKLEEADRVYDFLAGLNPKFDNVCGRILGQRPLPSLMEVCFE 353
Query: 61 VRLEEDRTNAMGVLTTPTIDSAAFSARFSNHDSDKNNGKSIPACEHCKKQWHTKD 116
VRLEEDRTNAMGVLTTPTIDSAAFSAR SNHDSDKNNGKSIP CEHCKKQWHTKD
Sbjct: 354 VRLEEDRTNAMGVLTTPTIDSAAFSARSSNHDSDKNNGKSIPVCEHCKKQWHTKD 408
BLAST of MELO3C028461 vs. NCBI nr
Match:
KAA0048203.1 (Beta-galactosidase [Cucumis melo var. makuwa])
HSP 1 Score: 236.9 bits (603), Expect = 8.8e-59
Identity = 110/115 (95.65%), Postives = 110/115 (95.65%), Query Frame = 0
Query: 1 MHLCREIVWDTPNDCTQYAKLEEADRVYDFLAGLNPKFDNVCGRILGQRPLPSLMEVCFE 60
M LCRE VWDTPND TQYAKLEEADRVYDFLAGLNPKFDNVCGRILGQRPLPSLMEVCFE
Sbjct: 294 MDLCRETVWDTPNDSTQYAKLEEADRVYDFLAGLNPKFDNVCGRILGQRPLPSLMEVCFE 353
Query: 61 VRLEEDRTNAMGVLTTPTIDSAAFSARFSNHDSDKNNGKSIPACEHCKKQWHTKD 116
VRLEEDRTNAMGVLTTPTIDSAAFSAR SNHDSDKNNGKSIP CEHCKKQWHTKD
Sbjct: 354 VRLEEDRTNAMGVLTTPTIDSAAFSARSSNHDSDKNNGKSIPVCEHCKKQWHTKD 408
BLAST of MELO3C028461 vs. NCBI nr
Match:
KAA0025363.1 (Beta-galactosidase [Cucumis melo var. makuwa])
HSP 1 Score: 236.9 bits (603), Expect = 8.8e-59
Identity = 110/115 (95.65%), Postives = 110/115 (95.65%), Query Frame = 0
Query: 1 MHLCREIVWDTPNDCTQYAKLEEADRVYDFLAGLNPKFDNVCGRILGQRPLPSLMEVCFE 60
M LCRE VWDTPND TQYAKLEEADRVYDFLAGLNPKFDNVCGRILGQRPLPSLMEVCFE
Sbjct: 326 MDLCRETVWDTPNDSTQYAKLEEADRVYDFLAGLNPKFDNVCGRILGQRPLPSLMEVCFE 385
Query: 61 VRLEEDRTNAMGVLTTPTIDSAAFSARFSNHDSDKNNGKSIPACEHCKKQWHTKD 116
VRLEEDRTNAMGVLTTPTIDSAAFSAR SNHDSDKNNGKSIP CEHCKKQWHTKD
Sbjct: 386 VRLEEDRTNAMGVLTTPTIDSAAFSARSSNHDSDKNNGKSIPVCEHCKKQWHTKD 440
BLAST of MELO3C028461 vs. ExPASy TrEMBL
Match:
A0A5D3BJK7 (Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold155G001020 PE=4 SV=1)
HSP 1 Score: 236.9 bits (603), Expect = 4.2e-59
Identity = 110/115 (95.65%), Postives = 110/115 (95.65%), Query Frame = 0
Query: 1 MHLCREIVWDTPNDCTQYAKLEEADRVYDFLAGLNPKFDNVCGRILGQRPLPSLMEVCFE 60
M LCRE VWDTPND TQYAKLEEADRVYDFLAGLNPKFDNVCGRILGQRPLPSLMEVCFE
Sbjct: 294 MDLCRETVWDTPNDSTQYAKLEEADRVYDFLAGLNPKFDNVCGRILGQRPLPSLMEVCFE 353
Query: 61 VRLEEDRTNAMGVLTTPTIDSAAFSARFSNHDSDKNNGKSIPACEHCKKQWHTKD 116
VRLEEDRTNAMGVLTTPTIDSAAFSAR SNHDSDKNNGKSIP CEHCKKQWHTKD
Sbjct: 354 VRLEEDRTNAMGVLTTPTIDSAAFSARSSNHDSDKNNGKSIPVCEHCKKQWHTKD 408
BLAST of MELO3C028461 vs. ExPASy TrEMBL
Match:
A0A5D3C4T4 (Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold10G00040 PE=4 SV=1)
HSP 1 Score: 236.9 bits (603), Expect = 4.2e-59
Identity = 110/115 (95.65%), Postives = 110/115 (95.65%), Query Frame = 0
Query: 1 MHLCREIVWDTPNDCTQYAKLEEADRVYDFLAGLNPKFDNVCGRILGQRPLPSLMEVCFE 60
M LCRE VWDTPND TQYAKLEEADRVYDFLAGLNPKFDNVCGRILGQRPLPSLMEVCFE
Sbjct: 294 MDLCRETVWDTPNDSTQYAKLEEADRVYDFLAGLNPKFDNVCGRILGQRPLPSLMEVCFE 353
Query: 61 VRLEEDRTNAMGVLTTPTIDSAAFSARFSNHDSDKNNGKSIPACEHCKKQWHTKD 116
VRLEEDRTNAMGVLTTPTIDSAAFSAR SNHDSDKNNGKSIP CEHCKKQWHTKD
Sbjct: 354 VRLEEDRTNAMGVLTTPTIDSAAFSARSSNHDSDKNNGKSIPVCEHCKKQWHTKD 408
BLAST of MELO3C028461 vs. ExPASy TrEMBL
Match:
A0A5A7VLQ7 (Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold115G00690 PE=4 SV=1)
HSP 1 Score: 236.9 bits (603), Expect = 4.2e-59
Identity = 110/115 (95.65%), Postives = 110/115 (95.65%), Query Frame = 0
Query: 1 MHLCREIVWDTPNDCTQYAKLEEADRVYDFLAGLNPKFDNVCGRILGQRPLPSLMEVCFE 60
M LCRE VWDTPND TQYAKLEEADRVYDFLAGLNPKFDNVCGRILGQRPLPSLMEVCFE
Sbjct: 294 MDLCRETVWDTPNDSTQYAKLEEADRVYDFLAGLNPKFDNVCGRILGQRPLPSLMEVCFE 353
Query: 61 VRLEEDRTNAMGVLTTPTIDSAAFSARFSNHDSDKNNGKSIPACEHCKKQWHTKD 116
VRLEEDRTNAMGVLTTPTIDSAAFSAR SNHDSDKNNGKSIP CEHCKKQWHTKD
Sbjct: 354 VRLEEDRTNAMGVLTTPTIDSAAFSARSSNHDSDKNNGKSIPVCEHCKKQWHTKD 408
BLAST of MELO3C028461 vs. ExPASy TrEMBL
Match:
A0A5A7UI74 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2256G00180 PE=4 SV=1)
HSP 1 Score: 236.9 bits (603), Expect = 4.2e-59
Identity = 110/115 (95.65%), Postives = 110/115 (95.65%), Query Frame = 0
Query: 1 MHLCREIVWDTPNDCTQYAKLEEADRVYDFLAGLNPKFDNVCGRILGQRPLPSLMEVCFE 60
M LCRE VWDTPND TQYAKLEEADRVYDFLAGLNPKFDNVCGRILGQRPLPSLMEVCFE
Sbjct: 1 MDLCRETVWDTPNDSTQYAKLEEADRVYDFLAGLNPKFDNVCGRILGQRPLPSLMEVCFE 60
Query: 61 VRLEEDRTNAMGVLTTPTIDSAAFSARFSNHDSDKNNGKSIPACEHCKKQWHTKD 116
VRLEEDRTNAMGVLTTPTIDSAAFSAR SNHDSDKNNGKSIP CEHCKKQWHTKD
Sbjct: 61 VRLEEDRTNAMGVLTTPTIDSAAFSARSSNHDSDKNNGKSIPVCEHCKKQWHTKD 115
BLAST of MELO3C028461 vs. ExPASy TrEMBL
Match:
A0A5A7SM64 (Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold130G00220 PE=4 SV=1)
HSP 1 Score: 236.9 bits (603), Expect = 4.2e-59
Identity = 110/115 (95.65%), Postives = 110/115 (95.65%), Query Frame = 0
Query: 1 MHLCREIVWDTPNDCTQYAKLEEADRVYDFLAGLNPKFDNVCGRILGQRPLPSLMEVCFE 60
M LCRE VWDTPND TQYAKLEEADRVYDFLAGLNPKFDNVCGRILGQRPLPSLMEVCFE
Sbjct: 294 MDLCRETVWDTPNDSTQYAKLEEADRVYDFLAGLNPKFDNVCGRILGQRPLPSLMEVCFE 353
Query: 61 VRLEEDRTNAMGVLTTPTIDSAAFSARFSNHDSDKNNGKSIPACEHCKKQWHTKD 116
VRLEEDRTNAMGVLTTPTIDSAAFSAR SNHDSDKNNGKSIP CEHCKKQWHTKD
Sbjct: 354 VRLEEDRTNAMGVLTTPTIDSAAFSARSSNHDSDKNNGKSIPVCEHCKKQWHTKD 408
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| TYJ99952.1 | 8.8e-59 | 95.65 | Beta-galactosidase [Cucumis melo var. makuwa] >TYK02395.1 Beta-galactosidase [Cu... | [more] |
| KAA0031941.1 | 8.8e-59 | 95.65 | Beta-galactosidase [Cucumis melo var. makuwa] | [more] |
| TYK08054.1 | 8.8e-59 | 95.65 | Beta-galactosidase [Cucumis melo var. makuwa] | [more] |
| KAA0048203.1 | 8.8e-59 | 95.65 | Beta-galactosidase [Cucumis melo var. makuwa] | [more] |
| KAA0025363.1 | 8.8e-59 | 95.65 | Beta-galactosidase [Cucumis melo var. makuwa] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A5D3BJK7 | 4.2e-59 | 95.65 | Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold155G0... | [more] |
| A0A5D3C4T4 | 4.2e-59 | 95.65 | Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold10G00... | [more] |
| A0A5A7VLQ7 | 4.2e-59 | 95.65 | Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold115G0... | [more] |
| A0A5A7UI74 | 4.2e-59 | 95.65 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var.... | [more] |
| A0A5A7SM64 | 4.2e-59 | 95.65 | Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold130G0... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
