Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGAAAGTAGAGGCGGAATCCAGAGACGAAGCAATGAGATCCAAAACCACCGTTCGATGTGCGAAAGCAGCTTTTCTTCTTTCTTCGCTCAAATCCTCCCAAAATCGCCATCTCAGAGCCACTGTCGATGAACAAGCCAAGGTTCTCAATTACAACTTATTATCAGTACCTGCCCTAGCTTGTGGATAGCGTTCTGGTTTATTTGATTCGCGATTTTGAAAAATTAAAACGTCAATTACCTTTCAGGAGAAAGAGATGCTGAGGAAAGCTGTGGGAGATTTGAAGATCGAGTTGGCTAGGGAGCATCTGAGGAATAAGAGGATCAAACTCTGCGGTTTGATGGAATTTGTTCTTCAGCTTCTGCTGGTTATCTCTCTTTCGAGCTTCTTCCTTTTTGTTGCCTTCAAATTTGTCTGA
mRNA sequence
ATGGAGAAAGTAGAGGCGGAATCCAGAGACGAAGCAATGAGATCCAAAACCACCGTTCGATGTGCGAAAGCAGCTTTTCTTCTTTCTTCGCTCAAATCCTCCCAAAATCGCCATCTCAGAGCCACTGTCGATGAACAAGCCAAGGAGAAAGAGATGCTGAGGAAAGCTGTGGGAGATTTGAAGATCGAGTTGGCTAGGGAGCATCTGAGGAATAAGAGGATCAAACTCTGCGGTTTGATGGAATTTGTTCTTCAGCTTCTGCTGGTTATCTCTCTTTCGAGCTTCTTCCTTTTTGTTGCCTTCAAATTTGTCTGA
Coding sequence (CDS)
ATGGAGAAAGTAGAGGCGGAATCCAGAGACGAAGCAATGAGATCCAAAACCACCGTTCGATGTGCGAAAGCAGCTTTTCTTCTTTCTTCGCTCAAATCCTCCCAAAATCGCCATCTCAGAGCCACTGTCGATGAACAAGCCAAGGAGAAAGAGATGCTGAGGAAAGCTGTGGGAGATTTGAAGATCGAGTTGGCTAGGGAGCATCTGAGGAATAAGAGGATCAAACTCTGCGGTTTGATGGAATTTGTTCTTCAGCTTCTGCTGGTTATCTCTCTTTCGAGCTTCTTCCTTTTTGTTGCCTTCAAATTTGTCTGA
Protein sequence
MEKVEAESRDEAMRSKTTVRCAKAAFLLSSLKSSQNRHLRATVDEQAKEKEMLRKAVGDLKIELAREHLRNKRIKLCGLMEFVLQLLLVISLSSFFLFVAFKFV
Homology
BLAST of HG10013370 vs. NCBI nr
Match:
XP_022940284.1 (uncharacterized protein LOC111445952 [Cucurbita moschata] >XP_023524781.1 uncharacterized protein LOC111788615 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 153.3 bits (386), Expect = 1.2e-33
Identity = 88/104 (84.62%), Postives = 93/104 (89.42%), Query Frame = 0
Query: 1 MEKVEAESRDEAMRSKTTVRCAKAAFLLSSLKSSQNRHLRATVDEQAKEKEMLRKAVGDL 60
ME VEAESRDEAMRSKT RCAKAAFL+SS KS QNR+LRA+VDEQAKEKE LRK VGDL
Sbjct: 1 MEGVEAESRDEAMRSKTAFRCAKAAFLISSFKSFQNRNLRASVDEQAKEKERLRKVVGDL 60
Query: 61 KIELAREHLRNKRIKLCGLMEFVLQLLLVISLSSFFLFVAFKFV 105
KIELA E RNKRIKLCGLMEFVLQLLLVISLSSFFLF+AFK +
Sbjct: 61 KIELAMERRRNKRIKLCGLMEFVLQLLLVISLSSFFLFIAFKSI 104
BLAST of HG10013370 vs. NCBI nr
Match:
KAA0038606.1 (putative Retrotransposon-derived protein PEG10 [Cucumis melo var. makuwa] >TYK31205.1 putative Retrotransposon-derived protein PEG10 [Cucumis melo var. makuwa])
HSP 1 Score: 152.9 bits (385), Expect = 1.5e-33
Identity = 90/105 (85.71%), Postives = 95/105 (90.48%), Query Frame = 0
Query: 1 MEKVEAESRDEAMR-SKTTVRCAKAAFLLSSLKSSQNRHLRATVDEQAKEKEMLRKAVGD 60
ME VEAES+DEAMR SKT +RCAKAAFLLSSLKSSQNR LRAT EQAKE++MLRK VGD
Sbjct: 1 MENVEAESKDEAMRGSKTAIRCAKAAFLLSSLKSSQNRQLRATAHEQAKERKMLRKTVGD 60
Query: 61 LKIELAREHLRNKRIKLCGLMEFVLQLLLVISLSSFFLFVAFKFV 105
LKI+LARE LRNKRIKLCGLMEFVLQLLLVISLSS LFVAFKFV
Sbjct: 61 LKIQLARERLRNKRIKLCGLMEFVLQLLLVISLSSLSLFVAFKFV 105
BLAST of HG10013370 vs. NCBI nr
Match:
KAG7031715.1 (hypothetical protein SDJN02_05756, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 151.0 bits (380), Expect = 5.7e-33
Identity = 86/104 (82.69%), Postives = 93/104 (89.42%), Query Frame = 0
Query: 1 MEKVEAESRDEAMRSKTTVRCAKAAFLLSSLKSSQNRHLRATVDEQAKEKEMLRKAVGDL 60
ME VEAESRDEAMRSKT RCAKAAFL+SS KS QNR+LRA+VDE+AKEKE LRK VGDL
Sbjct: 1 MEGVEAESRDEAMRSKTAFRCAKAAFLISSFKSLQNRNLRASVDEEAKEKERLRKVVGDL 60
Query: 61 KIELAREHLRNKRIKLCGLMEFVLQLLLVISLSSFFLFVAFKFV 105
KIELA E RN+RIKLCGLMEFVLQLLLVISLSSFFLF+AFK +
Sbjct: 61 KIELAMERRRNRRIKLCGLMEFVLQLLLVISLSSFFLFIAFKSI 104
BLAST of HG10013370 vs. NCBI nr
Match:
XP_022138206.1 (uncharacterized protein LOC111009432 [Momordica charantia])
HSP 1 Score: 150.6 bits (379), Expect = 7.5e-33
Identity = 84/102 (82.35%), Postives = 92/102 (90.20%), Query Frame = 0
Query: 1 MEKVEAESRDEAMRSKTTVRCAKAAFLLSSLKSSQNRHLRATVDEQAKEKEMLRKAVGDL 60
MEKVEAESRDEAMRS+T RCAKAAF+LSSLKSSQN +LRATV E KEKE LRK +GDL
Sbjct: 1 MEKVEAESRDEAMRSRTAFRCAKAAFVLSSLKSSQNHYLRATVYEIVKEKEKLRKTLGDL 60
Query: 61 KIELAREHLRNKRIKLCGLMEFVLQLLLVISLSSFFLFVAFK 103
K+ELARE LRNKRIKLCGLMEFVLQ+LLVI+LSSFF F+AFK
Sbjct: 61 KVELARERLRNKRIKLCGLMEFVLQILLVITLSSFFFFIAFK 102
BLAST of HG10013370 vs. NCBI nr
Match:
XP_011652624.1 (uncharacterized protein LOC105435036 [Cucumis sativus] >KGN60336.1 hypothetical protein Csa_001987 [Cucumis sativus])
HSP 1 Score: 144.1 bits (362), Expect = 7.0e-31
Identity = 84/102 (82.35%), Postives = 92/102 (90.20%), Query Frame = 0
Query: 1 MEKVEAESRDEAMR-SKTTVRCAKAAFLLSSLKSSQNRHLRATVDEQAKEKEMLRKAVGD 60
ME VEAE+++EAMR SKT +RCAKAAFLLSSLKSSQNR LRATV EQAKEK+ML K VGD
Sbjct: 1 MEDVEAETKNEAMRGSKTAIRCAKAAFLLSSLKSSQNRQLRATVHEQAKEKKMLGKTVGD 60
Query: 61 LKIELAREHLRNKRIKLCGLMEFVLQLLLVISLSSFFLFVAF 102
LKI+LARE +RNKRIKLCGLMEFVLQLLLV+SLSS FLF AF
Sbjct: 61 LKIQLARERVRNKRIKLCGLMEFVLQLLLVLSLSSLFLFAAF 102
BLAST of HG10013370 vs. ExPASy TrEMBL
Match:
A0A6J1FJM5 (uncharacterized protein LOC111445952 OS=Cucurbita moschata OX=3662 GN=LOC111445952 PE=4 SV=1)
HSP 1 Score: 153.3 bits (386), Expect = 5.6e-34
Identity = 88/104 (84.62%), Postives = 93/104 (89.42%), Query Frame = 0
Query: 1 MEKVEAESRDEAMRSKTTVRCAKAAFLLSSLKSSQNRHLRATVDEQAKEKEMLRKAVGDL 60
ME VEAESRDEAMRSKT RCAKAAFL+SS KS QNR+LRA+VDEQAKEKE LRK VGDL
Sbjct: 1 MEGVEAESRDEAMRSKTAFRCAKAAFLISSFKSFQNRNLRASVDEQAKEKERLRKVVGDL 60
Query: 61 KIELAREHLRNKRIKLCGLMEFVLQLLLVISLSSFFLFVAFKFV 105
KIELA E RNKRIKLCGLMEFVLQLLLVISLSSFFLF+AFK +
Sbjct: 61 KIELAMERRRNKRIKLCGLMEFVLQLLLVISLSSFFLFIAFKSI 104
BLAST of HG10013370 vs. ExPASy TrEMBL
Match:
A0A5D3E7E0 (Putative Retrotransposon-derived protein PEG10 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G004900 PE=4 SV=1)
HSP 1 Score: 152.9 bits (385), Expect = 7.3e-34
Identity = 90/105 (85.71%), Postives = 95/105 (90.48%), Query Frame = 0
Query: 1 MEKVEAESRDEAMR-SKTTVRCAKAAFLLSSLKSSQNRHLRATVDEQAKEKEMLRKAVGD 60
ME VEAES+DEAMR SKT +RCAKAAFLLSSLKSSQNR LRAT EQAKE++MLRK VGD
Sbjct: 1 MENVEAESKDEAMRGSKTAIRCAKAAFLLSSLKSSQNRQLRATAHEQAKERKMLRKTVGD 60
Query: 61 LKIELAREHLRNKRIKLCGLMEFVLQLLLVISLSSFFLFVAFKFV 105
LKI+LARE LRNKRIKLCGLMEFVLQLLLVISLSS LFVAFKFV
Sbjct: 61 LKIQLARERLRNKRIKLCGLMEFVLQLLLVISLSSLSLFVAFKFV 105
BLAST of HG10013370 vs. ExPASy TrEMBL
Match:
A0A6J1C920 (uncharacterized protein LOC111009432 OS=Momordica charantia OX=3673 GN=LOC111009432 PE=4 SV=1)
HSP 1 Score: 150.6 bits (379), Expect = 3.6e-33
Identity = 84/102 (82.35%), Postives = 92/102 (90.20%), Query Frame = 0
Query: 1 MEKVEAESRDEAMRSKTTVRCAKAAFLLSSLKSSQNRHLRATVDEQAKEKEMLRKAVGDL 60
MEKVEAESRDEAMRS+T RCAKAAF+LSSLKSSQN +LRATV E KEKE LRK +GDL
Sbjct: 1 MEKVEAESRDEAMRSRTAFRCAKAAFVLSSLKSSQNHYLRATVYEIVKEKEKLRKTLGDL 60
Query: 61 KIELAREHLRNKRIKLCGLMEFVLQLLLVISLSSFFLFVAFK 103
K+ELARE LRNKRIKLCGLMEFVLQ+LLVI+LSSFF F+AFK
Sbjct: 61 KVELARERLRNKRIKLCGLMEFVLQILLVITLSSFFFFIAFK 102
BLAST of HG10013370 vs. ExPASy TrEMBL
Match:
A0A0A0LJY1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G895820 PE=4 SV=1)
HSP 1 Score: 144.1 bits (362), Expect = 3.4e-31
Identity = 84/102 (82.35%), Postives = 92/102 (90.20%), Query Frame = 0
Query: 1 MEKVEAESRDEAMR-SKTTVRCAKAAFLLSSLKSSQNRHLRATVDEQAKEKEMLRKAVGD 60
ME VEAE+++EAMR SKT +RCAKAAFLLSSLKSSQNR LRATV EQAKEK+ML K VGD
Sbjct: 1 MEDVEAETKNEAMRGSKTAIRCAKAAFLLSSLKSSQNRQLRATVHEQAKEKKMLGKTVGD 60
Query: 61 LKIELAREHLRNKRIKLCGLMEFVLQLLLVISLSSFFLFVAF 102
LKI+LARE +RNKRIKLCGLMEFVLQLLLV+SLSS FLF AF
Sbjct: 61 LKIQLARERVRNKRIKLCGLMEFVLQLLLVLSLSSLFLFAAF 102
BLAST of HG10013370 vs. ExPASy TrEMBL
Match:
A0A5N6R7K9 (Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_013632 PE=4 SV=1)
HSP 1 Score: 104.8 bits (260), Expect = 2.3e-19
Identity = 53/96 (55.21%), Postives = 81/96 (84.38%), Query Frame = 0
Query: 5 EAESRDEAMRSKTTVRCAKAAFLLSSLKSSQNRHLRATVDEQAKEKEMLRKAVGDLKIEL 64
+ E+ D+A++SK VRCAKAAFLLS+LKSS NR++ +T ++Q +E E++R+ +G+LK+EL
Sbjct: 8 DTEAMDDALKSKIVVRCAKAAFLLSALKSSPNRYVNSTTEDQHEEVELMRREIGELKMEL 67
Query: 65 AREHLRNKRIKLCGLMEFVLQLLLVISLSSFFLFVA 101
ARE L+N+RIKLCGLME VL++ +V+ +S+FFL ++
Sbjct: 68 ARERLKNRRIKLCGLMEVVLEVAVVLCVSTFFLMLS 103
BLAST of HG10013370 vs. TAIR 10
Match:
AT1G78172.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )
HSP 1 Score: 58.5 bits (140), Expect = 3.6e-09
Identity = 40/92 (43.48%), Postives = 57/92 (61.96%), Query Frame = 0
Query: 8 SRDEAMRSKTTVRCAKAAFLLSSLKSSQNRHLRATVDE--QAKEKEMLRKAVGDLKIELA 67
S+DE R T +RCA+A LL SL SS+ T+D + +EK R+ + DL+ +L
Sbjct: 3 SKDEFSRDLTAIRCARATMLLYSLASSR------TIDSAGEKQEKGETRREIEDLRRKLT 62
Query: 68 REHLRNKRIKLCGLMEFVLQLLLVISLSSFFL 98
++ RIKLCGLME +L + LV+ LS+FFL
Sbjct: 63 MVKIKMNRIKLCGLMELLLLVFLVLLLSTFFL 88
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_022940284.1 | 1.2e-33 | 84.62 | uncharacterized protein LOC111445952 [Cucurbita moschata] >XP_023524781.1 unchar... | [more] |
KAA0038606.1 | 1.5e-33 | 85.71 | putative Retrotransposon-derived protein PEG10 [Cucumis melo var. makuwa] >TYK31... | [more] |
KAG7031715.1 | 5.7e-33 | 82.69 | hypothetical protein SDJN02_05756, partial [Cucurbita argyrosperma subsp. argyro... | [more] |
XP_022138206.1 | 7.5e-33 | 82.35 | uncharacterized protein LOC111009432 [Momordica charantia] | [more] |
XP_011652624.1 | 7.0e-31 | 82.35 | uncharacterized protein LOC105435036 [Cucumis sativus] >KGN60336.1 hypothetical ... | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1FJM5 | 5.6e-34 | 84.62 | uncharacterized protein LOC111445952 OS=Cucurbita moschata OX=3662 GN=LOC1114459... | [more] |
A0A5D3E7E0 | 7.3e-34 | 85.71 | Putative Retrotransposon-derived protein PEG10 OS=Cucumis melo var. makuwa OX=11... | [more] |
A0A6J1C920 | 3.6e-33 | 82.35 | uncharacterized protein LOC111009432 OS=Momordica charantia OX=3673 GN=LOC111009... | [more] |
A0A0A0LJY1 | 3.4e-31 | 82.35 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G895820 PE=4 SV=1 | [more] |
A0A5N6R7K9 | 2.3e-19 | 55.21 | Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_013632 PE=4 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
AT1G78172.1 | 3.6e-09 | 43.48 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... | [more] |