Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATATTGAACCCTTGTGGGGTGTTGGGGGGTGGTTTCTTGTCTTAAATTGCATGGCAGCTGCTCCAAAACCATCTTCATCCCACTTTCTCACTCCTAAATCCATTCTCTTTCTCTCTCTCCTCCTCTCCTCCCTCCTCCTTCTAACCCTCATTTCAACCCCTCCCTCCATGGCGGCCACCAACCATAGGATTCTTTCCGCTACCGTCTCCACCGCCACCGCCACGTCCTTCCACCCGACGCAATCTCGACGCCGTAATTCTCCAGCCACCGCCGGAGAATTCGGAGCTGAAGCCCATGAAGTTCCCAGCGGTCCAAACCCCATATCCAACTAA
mRNA sequence
ATGGATATTGAACCCTTGTGGGGTGTTGGGGGGTGGTTTCTTGTCTTAAATTGCATGGCAGCTGCTCCAAAACCATCTTCATCCCACTTTCTCACTCCTAAATCCATTCTCTTTCTCTCTCTCCTCCTCTCCTCCCTCCTCCTTCTAACCCTCATTTCAACCCCTCCCTCCATGGCGGCCACCAACCATAGGATTCTTTCCGCTACCGTCTCCACCGCCACCGCCACGTCCTTCCACCCGACGCAATCTCGACGCCGTAATTCTCCAGCCACCGCCGGAGAATTCGGAGCTGAAGCCCATGAAGTTCCCAGCGGTCCAAACCCCATATCCAACTAA
Coding sequence (CDS)
ATGGATATTGAACCCTTGTGGGGTGTTGGGGGGTGGTTTCTTGTCTTAAATTGCATGGCAGCTGCTCCAAAACCATCTTCATCCCACTTTCTCACTCCTAAATCCATTCTCTTTCTCTCTCTCCTCCTCTCCTCCCTCCTCCTTCTAACCCTCATTTCAACCCCTCCCTCCATGGCGGCCACCAACCATAGGATTCTTTCCGCTACCGTCTCCACCGCCACCGCCACGTCCTTCCACCCGACGCAATCTCGACGCCGTAATTCTCCAGCCACCGCCGGAGAATTCGGAGCTGAAGCCCATGAAGTTCCCAGCGGTCCAAACCCCATATCCAACTAA
Protein sequence
MDIEPLWGVGGWFLVLNCMAAAPKPSSSHFLTPKSILFLSLLLSSLLLLTLISTPPSMAATNHRILSATVSTATATSFHPTQSRRRNSPATAGEFGAEAHEVPSGPNPISN
Homology
BLAST of Moc09g00630 vs. NCBI nr
Match:
KAE8646241.1 (hypothetical protein Csa_015939 [Cucumis sativus])
HSP 1 Score: 125.9 bits (315), Expect = 2.1e-25
Identity = 78/115 (67.83%), Postives = 89/115 (77.39%), Query Frame = 0
Query: 1 MDIEPLWGVGGWFLVLNCMA-AAPKPSSSHFLTPKSILFLSLLLSSLLLLTLISTPPSMA 60
MDIEPLWGVGGWF LNCMA A+ K SSSHF +LFLSL S LLLLTLIS+PPSMA
Sbjct: 1 MDIEPLWGVGGWFFFLNCMATASQKQSSSHFF----VLFLSLFFSFLLLLTLISSPPSMA 60
Query: 61 A-TNHRILSATVSTATATSFHPTQSR-RRNSPAT-AGEFGAEAHEVPSGPNPISN 112
+ +HR+LS A++T+FHP +SR R SPAT G+FGAEAHEVPSGPNPISN
Sbjct: 61 SDRHHRLLS-----ASSTAFHPKKSRPRTTSPATVVGQFGAEAHEVPSGPNPISN 106
BLAST of Moc09g00630 vs. NCBI nr
Match:
XP_011458193.1 (PREDICTED: CLAVATA3/ESR (CLE)-related protein TDIF-like [Fragaria vesca subsp. vesca])
HSP 1 Score: 95.5 bits (236), Expect = 3.0e-16
Identity = 64/123 (52.03%), Postives = 79/123 (64.23%), Query Frame = 0
Query: 1 MDIEPLWGVGGWFLVLNCMAAAPKPSSSHFLTPKSILFLSLLLSSLL---LLTLISTP-- 60
MDIEPLW +GGWFL NCMA+APK S TP + L +L+LS L LL L++TP
Sbjct: 1 MDIEPLWALGGWFLFPNCMASAPKSISESHTTPATKLHPALILSLTLVFALLLLLATPLS 60
Query: 61 -PSMAATNHRILSATVSTATATSFHP--TQSRRRNSPATA----GEFGAEAHEVPSGPNP 112
PS AT R+L A +T T T+ P TQ+ + + +T+ EFGAEAHEVPSGPNP
Sbjct: 61 NPSSMATK-RLLLADTTTTTTTNLQPKETQNSHKGTSSTSTRARSEFGAEAHEVPSGPNP 120
BLAST of Moc09g00630 vs. NCBI nr
Match:
XP_024165976.1 (CLAVATA3/ESR (CLE)-related protein 41 [Rosa chinensis] >PRQ25562.1 hypothetical protein RchiOBHm_Chr6g0285001 [Rosa chinensis])
HSP 1 Score: 95.1 bits (235), Expect = 4.0e-16
Identity = 60/121 (49.59%), Postives = 80/121 (66.12%), Query Frame = 0
Query: 1 MDIEPLWGVGGWFLVLNCMAAAPKP-SSSHFLTPK---SILFLSLLLSSLLLLTLISTPP 60
MDIEPLW +GGWFL+ NCMA+APK S SH + K IL L+++ LLL+T +S P
Sbjct: 1 MDIEPLWALGGWFLLPNCMASAPKSISESHTTSTKLHPLILSLTVVFILLLLVTPLSNPS 60
Query: 61 SMAATNHRILSATVSTATATSFHPTQSRRRNSPATA------GEFGAEAHEVPSGPNPIS 112
SMA + R+L A +T T T+ P +++ ++ ++ EFGAEAHEVPSGPNPIS
Sbjct: 61 SMA--SKRLLLADTTTTTTTNLQPKKAKNSHTSTSSTSTRARSEFGAEAHEVPSGPNPIS 119
BLAST of Moc09g00630 vs. NCBI nr
Match:
KAB2602106.1 (CLAVATA3/ESR (CLE)-related protein 44 [Pyrus ussuriensis x Pyrus communis])
HSP 1 Score: 94.7 bits (234), Expect = 5.2e-16
Identity = 66/135 (48.89%), Postives = 83/135 (61.48%), Query Frame = 0
Query: 1 MDIEPLWGVGGWFLVLNCMAAAPK--------PSSSHFLT---PKSILFLSLLLSSLLLL 60
MDIEPLW +GGWFL+ NCMAAAPK PS S F T P +LFL+L+ LLL
Sbjct: 1 MDIEPLWALGGWFLLPNCMAAAPKTSPSPSSSPSISEFPTKVNPNLLLFLALVFFIFLLL 60
Query: 61 TLISTPPSMAA-------TNHRILSATVSTATATSFH------PTQSRRRNSPATAGEFG 112
+P SMA+ T+ R+LS +S +T T+FH PT + ++P+ +FG
Sbjct: 61 V---SPSSMASSSSTSPITSKRLLSEPLSKST-TNFHPKNTQNPTTTSSSSNPSARRDFG 120
BLAST of Moc09g00630 vs. NCBI nr
Match:
TQE12464.1 (hypothetical protein C1H46_002117 [Malus baccata])
HSP 1 Score: 94.0 bits (232), Expect = 8.9e-16
Identity = 64/132 (48.48%), Postives = 81/132 (61.36%), Query Frame = 0
Query: 1 MDIEPLWGVGGWFLVLNCMAAAPK--------PSSSHFLT---PKSILFLSLLLSSLLLL 60
MDIEPLW +GGWFL+ NCMAAAPK PS S F T P +LFL+L+ LLL
Sbjct: 1 MDIEPLWALGGWFLLPNCMAAAPKTSSSPPSSPSISEFPTKVNPNLLLFLALVFFIFLLL 60
Query: 61 ----TLISTPPSMAATNHRILSATVSTATATSFH------PTQSRRRNSPATAGEFGAEA 112
++ S+ + T+ R+LS S +T T+FH PT + ++P+ EFGAEA
Sbjct: 61 VSPSSMASSSSASPVTSKRLLSEPSSKST-TNFHPKNTKNPTTTTSSSNPSARREFGAEA 120
BLAST of Moc09g00630 vs. ExPASy Swiss-Prot
Match:
A1EC31 (CLAVATA3/ESR (CLE)-related protein TDIF OS=Zinnia violacea OX=34245 GN=TDIF PE=1 SV=1)
HSP 1 Score: 70.9 bits (172), Expect = 1.1e-11
Identity = 54/131 (41.22%), Postives = 68/131 (51.91%), Query Frame = 0
Query: 1 MDIEPLWGVGGWFLVL------NCMAAAPKPSS-SHFLTPKSI--LFLSLLLSSLLLLTL 60
MDI+ LW GGWF +L CMA S SHF P+S LF LL +L+T+
Sbjct: 1 MDIDLLWSFGGWFFILFPETINYCMAKLRSTSQISHFTNPRSCSSLFFVALLIITILITM 60
Query: 61 ISTPPSMAAT----------NHRILSATVSTATATS-FHPTQSRRRNSPATAGEFGAEAH 112
+ + SM T N S+T STAT T+ HP ++ ++ P F A AH
Sbjct: 61 LQSSTSMEVTSLPTHQPTSSNSHDESSTSSTATTTTDLHPKRTHHQSHPKPTRSFEAGAH 120
BLAST of Moc09g00630 vs. ExPASy TrEMBL
Match:
A0A2P6PUF9 (Uncharacterized protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr6g0285001 PE=4 SV=1)
HSP 1 Score: 95.1 bits (235), Expect = 1.9e-16
Identity = 60/121 (49.59%), Postives = 80/121 (66.12%), Query Frame = 0
Query: 1 MDIEPLWGVGGWFLVLNCMAAAPKP-SSSHFLTPK---SILFLSLLLSSLLLLTLISTPP 60
MDIEPLW +GGWFL+ NCMA+APK S SH + K IL L+++ LLL+T +S P
Sbjct: 1 MDIEPLWALGGWFLLPNCMASAPKSISESHTTSTKLHPLILSLTVVFILLLLVTPLSNPS 60
Query: 61 SMAATNHRILSATVSTATATSFHPTQSRRRNSPATA------GEFGAEAHEVPSGPNPIS 112
SMA + R+L A +T T T+ P +++ ++ ++ EFGAEAHEVPSGPNPIS
Sbjct: 61 SMA--SKRLLLADTTTTTTTNLQPKKAKNSHTSTSSTSTRARSEFGAEAHEVPSGPNPIS 119
BLAST of Moc09g00630 vs. ExPASy TrEMBL
Match:
A0A5N5FG68 (CLAVATA3/ESR (CLE)-related protein 44 OS=Pyrus ussuriensis x Pyrus communis OX=2448454 GN=D8674_003111 PE=4 SV=1)
HSP 1 Score: 94.7 bits (234), Expect = 2.5e-16
Identity = 66/135 (48.89%), Postives = 83/135 (61.48%), Query Frame = 0
Query: 1 MDIEPLWGVGGWFLVLNCMAAAPK--------PSSSHFLT---PKSILFLSLLLSSLLLL 60
MDIEPLW +GGWFL+ NCMAAAPK PS S F T P +LFL+L+ LLL
Sbjct: 1 MDIEPLWALGGWFLLPNCMAAAPKTSPSPSSSPSISEFPTKVNPNLLLFLALVFFIFLLL 60
Query: 61 TLISTPPSMAA-------TNHRILSATVSTATATSFH------PTQSRRRNSPATAGEFG 112
+P SMA+ T+ R+LS +S +T T+FH PT + ++P+ +FG
Sbjct: 61 V---SPSSMASSSSTSPITSKRLLSEPLSKST-TNFHPKNTQNPTTTSSSSNPSARRDFG 120
BLAST of Moc09g00630 vs. ExPASy TrEMBL
Match:
A0A540NN59 (Uncharacterized protein OS=Malus baccata OX=106549 GN=C1H46_002117 PE=4 SV=1)
HSP 1 Score: 94.0 bits (232), Expect = 4.3e-16
Identity = 64/132 (48.48%), Postives = 81/132 (61.36%), Query Frame = 0
Query: 1 MDIEPLWGVGGWFLVLNCMAAAPK--------PSSSHFLT---PKSILFLSLLLSSLLLL 60
MDIEPLW +GGWFL+ NCMAAAPK PS S F T P +LFL+L+ LLL
Sbjct: 1 MDIEPLWALGGWFLLPNCMAAAPKTSSSPPSSPSISEFPTKVNPNLLLFLALVFFIFLLL 60
Query: 61 ----TLISTPPSMAATNHRILSATVSTATATSFH------PTQSRRRNSPATAGEFGAEA 112
++ S+ + T+ R+LS S +T T+FH PT + ++P+ EFGAEA
Sbjct: 61 VSPSSMASSSSASPVTSKRLLSEPSSKST-TNFHPKNTKNPTTTTSSSNPSARREFGAEA 120
BLAST of Moc09g00630 vs. ExPASy TrEMBL
Match:
A0A5N5HBE2 (CLAVATA3/ESR (CLE)-related protein 44 OS=Pyrus ussuriensis x Pyrus communis OX=2448454 GN=D8674_038355 PE=4 SV=1)
HSP 1 Score: 92.8 bits (229), Expect = 9.6e-16
Identity = 63/132 (47.73%), Postives = 81/132 (61.36%), Query Frame = 0
Query: 1 MDIEPLWGVGGWFLVLNCMAAAPK--------PSSSHFLT---PKSILFLSLLLSSLLLL 60
MDIEPLW +GGWFL+ NCMAAAPK PS S F T P +LFL+L+ LLL
Sbjct: 1 MDIEPLWALGGWFLLPNCMAAAPKTSPSPSSSPSISEFPTKVNPNLLLFLALVFFIFLLL 60
Query: 61 ----TLISTPPSMAATNHRILSATVSTATATSFH------PTQSRRRNSPATAGEFGAEA 112
++ S+ + T+ R+LS +S +T T+FH PT ++P+ +FGAEA
Sbjct: 61 VSPSSMTSSSSTSPITSKRLLSEPLSKST-TNFHPKNTQNPTTRSSSSNPSARRDFGAEA 120
BLAST of Moc09g00630 vs. ExPASy TrEMBL
Match:
A0A5N5INL0 (CLAVATA3/ESR (CLE)-related protein 44 OS=Pyrus ussuriensis x Pyrus communis OX=2448454 GN=D8674_027078 PE=4 SV=1)
HSP 1 Score: 92.0 bits (227), Expect = 1.6e-15
Identity = 66/136 (48.53%), Postives = 81/136 (59.56%), Query Frame = 0
Query: 1 MDIEPLWGVGGWFLVLNCMAAAPK--------PSSSHFLT---PKSILFLSLLLSSLLLL 60
MDIEPLW +GGWFL+ NCMAAAPK PS S F T P +LFL+L+ LLL
Sbjct: 1 MDIEPLWALGGWFLLPNCMAAAPKTSSSPPSSPSISEFPTKVNPNLLLFLALVFFIFLLL 60
Query: 61 TLISTPPSMAA--------TNHRILSATVSTATATSFH------PTQSRRRNSPATAGEF 112
+P SMA+ T+ R+LS S +T +FH PT + ++P+ EF
Sbjct: 61 V---SPSSMASSSSSASPITSKRLLSEPSSKST-INFHPKNTKNPTTTTSSSNPSARREF 120
BLAST of Moc09g00630 vs. TAIR 10
Match:
AT3G24770.1 (CLAVATA3/ESR-RELATED 41 )
HSP 1 Score: 43.9 bits (102), Expect = 9.8e-05
Identity = 35/77 (45.45%), Postives = 45/77 (58.44%), Query Frame = 0
Query: 37 LFLSLLL-SSLLLLTLISTPPSMAATNHRI-LSATVSTATATSFHPTQSRRRNSPATAGE 96
+FLSLLL SSL + SM A R+ L ++V ++ P S RR+ + E
Sbjct: 23 IFLSLLLFSSLTIPMTRHQSTSMVAPFKRVLLESSVPASSTMDLRPKASTRRSRTSRRRE 82
Query: 97 FGAEAHEVPSGPNPISN 112
FG +AHEVPSGPNPISN
Sbjct: 83 FGNDAHEVPSGPNPISN 99
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
KAE8646241.1 | 2.1e-25 | 67.83 | hypothetical protein Csa_015939 [Cucumis sativus] | [more] |
XP_011458193.1 | 3.0e-16 | 52.03 | PREDICTED: CLAVATA3/ESR (CLE)-related protein TDIF-like [Fragaria vesca subsp. v... | [more] |
XP_024165976.1 | 4.0e-16 | 49.59 | CLAVATA3/ESR (CLE)-related protein 41 [Rosa chinensis] >PRQ25562.1 hypothetical ... | [more] |
KAB2602106.1 | 5.2e-16 | 48.89 | CLAVATA3/ESR (CLE)-related protein 44 [Pyrus ussuriensis x Pyrus communis] | [more] |
TQE12464.1 | 8.9e-16 | 48.48 | hypothetical protein C1H46_002117 [Malus baccata] | [more] |
Match Name | E-value | Identity | Description | |
A1EC31 | 1.1e-11 | 41.22 | CLAVATA3/ESR (CLE)-related protein TDIF OS=Zinnia violacea OX=34245 GN=TDIF PE=1... | [more] |
Match Name | E-value | Identity | Description | |
A0A2P6PUF9 | 1.9e-16 | 49.59 | Uncharacterized protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr6g0285001 PE=4... | [more] |
A0A5N5FG68 | 2.5e-16 | 48.89 | CLAVATA3/ESR (CLE)-related protein 44 OS=Pyrus ussuriensis x Pyrus communis OX=2... | [more] |
A0A540NN59 | 4.3e-16 | 48.48 | Uncharacterized protein OS=Malus baccata OX=106549 GN=C1H46_002117 PE=4 SV=1 | [more] |
A0A5N5HBE2 | 9.6e-16 | 47.73 | CLAVATA3/ESR (CLE)-related protein 44 OS=Pyrus ussuriensis x Pyrus communis OX=2... | [more] |
A0A5N5INL0 | 1.6e-15 | 48.53 | CLAVATA3/ESR (CLE)-related protein 44 OS=Pyrus ussuriensis x Pyrus communis OX=2... | [more] |
Match Name | E-value | Identity | Description | |
AT3G24770.1 | 9.8e-05 | 45.45 | CLAVATA3/ESR-RELATED 41 | [more] |