Sequences
The following sequences are available for this feature:
Legend: CDS polypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATGTCTTCATTCCCGACGATTACGTCATTCGCCGTCGCATCGAGAAAAAACTCGCCGCCCAAGCCCCCGTCAAGACCAGGCACCCACACCCCGCCGATCAACGGCCGAGGAATTCCGACAAGGAAAAAGAAGCTCCCGCAAAAACTGGATTATTCCGGTTCACCGCCACCGGCGCCGACAATGTGGTTTTCAATTGCTTCTCTGCTTGA
ATGGATGTCTTCATTCCCGACGATTACGTCATTCGCCGTCGCATCGAGAAAAAACTCGCCGCCCAAGCCCCCGTCAAGACCAGGCACCCACACCCCGCCGATCAACGGCCGAGGAATTCCGACAAGGAAAAAGAAGCTCCCGCAAAAACTGGATTATTCCGGTTCACCGCCACCGGCGCCGACAATGTGGTTTTCAATTGCTTCTCTGCTTGA
ATGGATGTCTTCATTCCCGACGATTACGTCATTCGCCGTCGCATCGAGAAAAAACTCGCCGCCCAAGCCCCCGTCAAGACCAGGCACCCACACCCCGCCGATCAACGGCCGAGGAATTCCGACAAGGAAAAAGAAGCTCCCGCAAAAACTGGATTATTCCGGTTCACCGCCACCGGCGCCGACAATGTGGTTTTCAATTGCTTCTCTGCTTGA
MDVFIPDDYVIRRRIEKKLAAQAPVKTRHPHPADQRPRNSDKEKEAPAKTGLFRFTATGADNVVFNCFSA*
Homology
BLAST of CSPI05G05640 vs. ExPASy TrEMBL
Match:
A0A0A0KKA7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G154820 PE=4 SV=1)
HSP 1 Score: 144.8 bits (364), Expect = 1.4e-31
Identity = 70/70 (100.00%), Postives = 70/70 (100.00%), Query Frame = 0
BLAST of CSPI05G05640 vs. ExPASy TrEMBL
Match:
A0A1R3IAB5 (Uncharacterized protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_13647 PE=4 SV=1)
HSP 1 Score: 52.4 bits (124), Expect = 9.2e-04
Identity = 36/79 (45.57%), Postives = 46/79 (58.23%), Query Frame = 0
BLAST of CSPI05G05640 vs. NCBI nr
Match:
KAE8647863.1 (hypothetical protein Csa_000530 [Cucumis sativus])
HSP 1 Score: 144.8 bits (364), Expect = 2.8e-31
Identity = 70/70 (100.00%), Postives = 70/70 (100.00%), Query Frame = 0
The following BLAST results are available for this feature:
Match Name E-value Identity Description
Match Name E-value Identity Description
A0A0A0KKA7 1.4e-31 100.00 Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G154820 PE=4 SV=1 [more] A0A1R3IAB5 9.2e-04 45.57 Uncharacterized protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_13647 PE=4 ... [more]
Match Name E-value Identity Description
KAE8647863.1 2.8e-31 100.00 hypothetical protein Csa_000530 [Cucumis sativus] [more]
Match Name E-value Identity Description
InterPro
Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25
A T G G A T G T C T T C A T T C C C G A C G A T T A C G T C A T T C G C C G T C G C A T C G A G A A A A A A C T C G C C G C C C A A G C C C C C G T C A A G A C C A G G C A C C C A C A C C C C G C C G A T C A A C G G C C G A G G A A T T C C G A C A A G G A A A A A G A A G C T C C C G C A A A A A C T G G A T T A T T C C G G T T C A C C G C C A C C G G C G C C G A C A A T G T G G T T T T C A A T T G C T T C T C T G C T T G A 20 40 60 80 100 120 140 160 180 200 Score = Sequence mobidb-lite
IPR Term IPR Description Source Source Term Source Description Alignment
None No IPR available MOBIDB_LITE mobidb-lite disorder_prediction coord: 20..49
Relationships
The following mRNA feature(s) are a part of this gene:
