Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGGGAGCTGAGGTAGACAATATGGGAATAAAAGATTATGTAAAGGAAGAGGCAAAAGAAAGTGAAAAGATATACATGAGTGAAAGATTATGTAACAAGAAGAAGAAAAGAAGACTATGGAAGAAGCAAAACATCCAGGTGAGGAAGGAGGATCTTGAGGTTCCAACAAAAAGCACCTCATCACCTGGTGTTGATTTTACATGGTTAGCAACAAGGACCCCCACAAGATTCACAAAAGGAATTCATGTCCTTAGAAGAAGAAGCAAAGGAAGAGAGTGGGAGCCAAAGGTGGGGGAGGACGTGGCCGAGGAGTTCGAGAATAAAGAGAATAGAAACACTCTGTCGGAGGAGTTCAAGAAAGAAGAGATCCTAGAGCATTCAATGATGCTCTTGTGGGCACAAGTAGAGGATGAGCAAAATGGAAAGTTGGGACCTCAACACCATCCATATGGCAATAAATAA
mRNA sequence
ATGGAGGGAGCTGAGGTAGACAATATGGGAATAAAAGATTATGTAAAGGAAGAGGCAAAAGAAAGTGAAAAGATATACATGAGTGAAAGATTATGTAACAAGAAGAAGAAAAGAAGACTATGGAAGAAGCAAAACATCCAGGTGAGGAAGGAGGATCTTGAGGTTCCAACAAAAAGCACCTCATCACCTGGTGTTGATTTTACATGGTTAGCAACAAGGACCCCCACAAGATTCACAAAAGGAATTCATGTCCTTAGAAGAAGAAGCAAAGGAAGAGAGTGGGAGCCAAAGGTGGGGGAGGACGTGGCCGAGGAGTTCGAGAATAAAGAGAATAGAAACACTCTGTCGGAGGAGTTCAAGAAAGAAGAGATCCTAGAGCATTCAATGATGCTCTTGTGGGCACAAGTAGAGGATGAGCAAAATGGAAAGTTGGGACCTCAACACCATCCATATGGCAATAAATAA
Coding sequence (CDS)
ATGGAGGGAGCTGAGGTAGACAATATGGGAATAAAAGATTATGTAAAGGAAGAGGCAAAAGAAAGTGAAAAGATATACATGAGTGAAAGATTATGTAACAAGAAGAAGAAAAGAAGACTATGGAAGAAGCAAAACATCCAGGTGAGGAAGGAGGATCTTGAGGTTCCAACAAAAAGCACCTCATCACCTGGTGTTGATTTTACATGGTTAGCAACAAGGACCCCCACAAGATTCACAAAAGGAATTCATGTCCTTAGAAGAAGAAGCAAAGGAAGAGAGTGGGAGCCAAAGGTGGGGGAGGACGTGGCCGAGGAGTTCGAGAATAAAGAGAATAGAAACACTCTGTCGGAGGAGTTCAAGAAAGAAGAGATCCTAGAGCATTCAATGATGCTCTTGTGGGCACAAGTAGAGGATGAGCAAAATGGAAAGTTGGGACCTCAACACCATCCATATGGCAATAAATAA
Protein sequence
MEGAEVDNMGIKDYVKEEAKESEKIYMSERLCNKKKKRRLWKKQNIQVRKEDLEVPTKSTSSPGVDFTWLATRTPTRFTKGIHVLRRRSKGREWEPKVGEDVAEEFENKENRNTLSEEFKKEEILEHSMMLLWAQVEDEQNGKLGPQHHPYGNK*
Homology
BLAST of CsaV3_3G022630 vs. NCBI nr
Match:
KGN57939.1 (hypothetical protein Csa_011472 [Cucumis sativus])
HSP 1 Score: 307.4 bits (786), Expect = 7.1e-80
Identity = 154/154 (100.00%), Postives = 154/154 (100.00%), Query Frame = 0
Query: 1 MEGAEVDNMGIKDYVKEEAKESEKIYMSERLCNKKKKRRLWKKQNIQVRKEDLEVPTKST 60
MEGAEVDNMGIKDYVKEEAKESEKIYMSERLCNKKKKRRLWKKQNIQVRKEDLEVPTKST
Sbjct: 1 MEGAEVDNMGIKDYVKEEAKESEKIYMSERLCNKKKKRRLWKKQNIQVRKEDLEVPTKST 60
Query: 61 SSPGVDFTWLATRTPTRFTKGIHVLRRRSKGREWEPKVGEDVAEEFENKENRNTLSEEFK 120
SSPGVDFTWLATRTPTRFTKGIHVLRRRSKGREWEPKVGEDVAEEFENKENRNTLSEEFK
Sbjct: 61 SSPGVDFTWLATRTPTRFTKGIHVLRRRSKGREWEPKVGEDVAEEFENKENRNTLSEEFK 120
Query: 121 KEEILEHSMMLLWAQVEDEQNGKLGPQHHPYGNK 155
KEEILEHSMMLLWAQVEDEQNGKLGPQHHPYGNK
Sbjct: 121 KEEILEHSMMLLWAQVEDEQNGKLGPQHHPYGNK 154
BLAST of CsaV3_3G022630 vs. NCBI nr
Match:
KGN57975.1 (hypothetical protein Csa_011070 [Cucumis sativus])
HSP 1 Score: 125.2 bits (313), Expect = 5.0e-25
Identity = 74/129 (57.36%), Postives = 86/129 (66.67%), Query Frame = 0
Query: 30 RLCNKKKKRRLWKKQNIQVRKEDLEVPTKSTSSPGVDFTWLATRTPTRFTKGIHVLRRRS 89
R KK R+ K RKEDLE+P KSTSSP DFT LATRTP R KGI VL +RS
Sbjct: 15 RFQKHKKGERMEK-----ARKEDLELPIKSTSSPDADFTRLATRTPVRSAKGIQVLGKRS 74
Query: 90 KGREWEPKVGEDVAEEFENKENRNTLSEE----FKKEEILEHSMMLLWAQVEDEQNGKLG 149
KG+EW KV E VAEE E +E T+SEE KKEEIL + MLLW Q++ +NGKLG
Sbjct: 75 KGKEWGTKVVEGVAEESEKEEKEITMSEEKLSIHKKEEILACARMLLWTQLDKGRNGKLG 134
Query: 150 PQHHPYGNK 155
P HHP+G+K
Sbjct: 135 PHHHPFGDK 138
BLAST of CsaV3_3G022630 vs. NCBI nr
Match:
KGN46686.1 (hypothetical protein Csa_020981 [Cucumis sativus])
HSP 1 Score: 102.4 bits (254), Expect = 3.5e-18
Identity = 57/93 (61.29%), Postives = 71/93 (76.34%), Query Frame = 0
Query: 1 MEGAEVDNMGIKDYVKEEAKESEKIYMSERLCNKKKKRRLWKKQNIQVRKEDLEVPTKST 60
ME AEV+NMG K +E+A+ESEKIY ++RLCNKK+KRR ++N Q RK+D+E+ +ST
Sbjct: 38 MEKAEVENMGKKIICREKAEESEKIYRNKRLCNKKRKRRRKNRRNSQARKKDIELSMEST 97
Query: 61 SSPGVDFTWLATRTPTRFTKGIHVLRRRSKGRE 94
SSP VDFT LATRTP R K I LRRRS+ RE
Sbjct: 98 SSPNVDFTKLATRTPARSAKEIWALRRRSEERE 130
BLAST of CsaV3_3G022630 vs. NCBI nr
Match:
KGN65003.1 (hypothetical protein Csa_022689 [Cucumis sativus])
HSP 1 Score: 87.0 bits (214), Expect = 1.5e-13
Identity = 54/95 (56.84%), Postives = 63/95 (66.32%), Query Frame = 0
Query: 60 TSSPGVDFTWLATRTPTRFTKGIHVLRRRSKGREWEPKVGEDVAEEFENKENRNTLSEE- 119
TSSP DF+ LATRT R TK I V RR K + E KVG+DVAEEFE ++ RNTLSEE
Sbjct: 4 TSSPDADFSGLATRTLIRSTKEILVFERRRKEPKSETKVGKDVAEEFEKEKTRNTLSEEK 63
Query: 120 ---FKKEEILEHSMMLLWAQVEDEQNGKLGPQHHP 151
KKEE +S LL AQVE+ Q ++GP HHP
Sbjct: 64 VPNCKKEEGQVYSRTLLQAQVEEGQKEQVGPHHHP 98
BLAST of CsaV3_3G022630 vs. NCBI nr
Match:
KGN57730.1 (hypothetical protein Csa_010598 [Cucumis sativus])
HSP 1 Score: 68.6 bits (166), Expect = 5.6e-08
Identity = 47/85 (55.29%), Postives = 51/85 (60.00%), Query Frame = 0
Query: 58 KSTSSPGVDFTWLATRTPTRFTKGIHVLRRRSKGREWEPKVGEDVAEEFENKENRNTLSE 117
+STSSP DF LATRTPTR T GI + GEDVAEEFE +E NTL E
Sbjct: 2 ESTSSPDADFIGLATRTPTRSTLGI--------------QAGEDVAEEFEKQEIINTLLE 61
Query: 118 E----FKKEEILEHSMMLLWAQVED 139
E KKEEIL HS MLL AQ E+
Sbjct: 62 EKVSTHKKEEILAHSRMLLQAQAEE 72
BLAST of CsaV3_3G022630 vs. ExPASy TrEMBL
Match:
A0A0A0LAF6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G399460 PE=4 SV=1)
HSP 1 Score: 307.4 bits (786), Expect = 3.5e-80
Identity = 154/154 (100.00%), Postives = 154/154 (100.00%), Query Frame = 0
Query: 1 MEGAEVDNMGIKDYVKEEAKESEKIYMSERLCNKKKKRRLWKKQNIQVRKEDLEVPTKST 60
MEGAEVDNMGIKDYVKEEAKESEKIYMSERLCNKKKKRRLWKKQNIQVRKEDLEVPTKST
Sbjct: 1 MEGAEVDNMGIKDYVKEEAKESEKIYMSERLCNKKKKRRLWKKQNIQVRKEDLEVPTKST 60
Query: 61 SSPGVDFTWLATRTPTRFTKGIHVLRRRSKGREWEPKVGEDVAEEFENKENRNTLSEEFK 120
SSPGVDFTWLATRTPTRFTKGIHVLRRRSKGREWEPKVGEDVAEEFENKENRNTLSEEFK
Sbjct: 61 SSPGVDFTWLATRTPTRFTKGIHVLRRRSKGREWEPKVGEDVAEEFENKENRNTLSEEFK 120
Query: 121 KEEILEHSMMLLWAQVEDEQNGKLGPQHHPYGNK 155
KEEILEHSMMLLWAQVEDEQNGKLGPQHHPYGNK
Sbjct: 121 KEEILEHSMMLLWAQVEDEQNGKLGPQHHPYGNK 154
BLAST of CsaV3_3G022630 vs. ExPASy TrEMBL
Match:
A0A0A0L7Q4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G417670 PE=4 SV=1)
HSP 1 Score: 125.2 bits (313), Expect = 2.4e-25
Identity = 74/129 (57.36%), Postives = 86/129 (66.67%), Query Frame = 0
Query: 30 RLCNKKKKRRLWKKQNIQVRKEDLEVPTKSTSSPGVDFTWLATRTPTRFTKGIHVLRRRS 89
R KK R+ K RKEDLE+P KSTSSP DFT LATRTP R KGI VL +RS
Sbjct: 15 RFQKHKKGERMEK-----ARKEDLELPIKSTSSPDADFTRLATRTPVRSAKGIQVLGKRS 74
Query: 90 KGREWEPKVGEDVAEEFENKENRNTLSEE----FKKEEILEHSMMLLWAQVEDEQNGKLG 149
KG+EW KV E VAEE E +E T+SEE KKEEIL + MLLW Q++ +NGKLG
Sbjct: 75 KGKEWGTKVVEGVAEESEKEEKEITMSEEKLSIHKKEEILACARMLLWTQLDKGRNGKLG 134
Query: 150 PQHHPYGNK 155
P HHP+G+K
Sbjct: 135 PHHHPFGDK 138
BLAST of CsaV3_3G022630 vs. ExPASy TrEMBL
Match:
A0A0A0KG13 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G124010 PE=4 SV=1)
HSP 1 Score: 102.4 bits (254), Expect = 1.7e-18
Identity = 57/93 (61.29%), Postives = 71/93 (76.34%), Query Frame = 0
Query: 1 MEGAEVDNMGIKDYVKEEAKESEKIYMSERLCNKKKKRRLWKKQNIQVRKEDLEVPTKST 60
ME AEV+NMG K +E+A+ESEKIY ++RLCNKK+KRR ++N Q RK+D+E+ +ST
Sbjct: 38 MEKAEVENMGKKIICREKAEESEKIYRNKRLCNKKRKRRRKNRRNSQARKKDIELSMEST 97
Query: 61 SSPGVDFTWLATRTPTRFTKGIHVLRRRSKGRE 94
SSP VDFT LATRTP R K I LRRRS+ RE
Sbjct: 98 SSPNVDFTKLATRTPARSAKEIWALRRRSEERE 130
BLAST of CsaV3_3G022630 vs. ExPASy TrEMBL
Match:
A0A0A0LTC4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G173720 PE=4 SV=1)
HSP 1 Score: 87.0 bits (214), Expect = 7.3e-14
Identity = 54/95 (56.84%), Postives = 63/95 (66.32%), Query Frame = 0
Query: 60 TSSPGVDFTWLATRTPTRFTKGIHVLRRRSKGREWEPKVGEDVAEEFENKENRNTLSEE- 119
TSSP DF+ LATRT R TK I V RR K + E KVG+DVAEEFE ++ RNTLSEE
Sbjct: 4 TSSPDADFSGLATRTLIRSTKEILVFERRRKEPKSETKVGKDVAEEFEKEKTRNTLSEEK 63
Query: 120 ---FKKEEILEHSMMLLWAQVEDEQNGKLGPQHHP 151
KKEE +S LL AQVE+ Q ++GP HHP
Sbjct: 64 VPNCKKEEGQVYSRTLLQAQVEEGQKEQVGPHHHP 98
BLAST of CsaV3_3G022630 vs. ExPASy TrEMBL
Match:
A0A0A0L6W8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G265260 PE=4 SV=1)
HSP 1 Score: 68.6 bits (166), Expect = 2.7e-08
Identity = 47/85 (55.29%), Postives = 51/85 (60.00%), Query Frame = 0
Query: 58 KSTSSPGVDFTWLATRTPTRFTKGIHVLRRRSKGREWEPKVGEDVAEEFENKENRNTLSE 117
+STSSP DF LATRTPTR T GI + GEDVAEEFE +E NTL E
Sbjct: 2 ESTSSPDADFIGLATRTPTRSTLGI--------------QAGEDVAEEFEKQEIINTLLE 61
Query: 118 E----FKKEEILEHSMMLLWAQVED 139
E KKEEIL HS MLL AQ E+
Sbjct: 62 EKVSTHKKEEILAHSRMLLQAQAEE 72
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| KGN57939.1 | 7.1e-80 | 100.00 | hypothetical protein Csa_011472 [Cucumis sativus] | [more] |
| KGN57975.1 | 5.0e-25 | 57.36 | hypothetical protein Csa_011070 [Cucumis sativus] | [more] |
| KGN46686.1 | 3.5e-18 | 61.29 | hypothetical protein Csa_020981 [Cucumis sativus] | [more] |
| KGN65003.1 | 1.5e-13 | 56.84 | hypothetical protein Csa_022689 [Cucumis sativus] | [more] |
| KGN57730.1 | 5.6e-08 | 55.29 | hypothetical protein Csa_010598 [Cucumis sativus] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A0A0LAF6 | 3.5e-80 | 100.00 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G399460 PE=4 SV=1 | [more] |
| A0A0A0L7Q4 | 2.4e-25 | 57.36 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G417670 PE=4 SV=1 | [more] |
| A0A0A0KG13 | 1.7e-18 | 61.29 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G124010 PE=4 SV=1 | [more] |
| A0A0A0LTC4 | 7.3e-14 | 56.84 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G173720 PE=4 SV=1 | [more] |
| A0A0A0L6W8 | 2.7e-08 | 55.29 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G265260 PE=4 SV=1 | [more] |
| Match Name | E-value | Identity | Description | |
|---|
