Tan0000398.1 (mRNA) Snake gourd v1

Overview


Name	Tan0000398.1
Type	mRNA
Organism	Trichosanthes anguina (Snake gourd v1)
Description	cucumber peeling cupredoxin-like
Location	LG06: 3105218 .. 3106797 (+)
Sequence length	618
RNA-Seq Expression	Tan0000398.1
Synteny	Tan0000398.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCGCCGAAGTTGGTTTTGTTCTTGGTTTAATTGCGGTGGTTTTTCTTCAACATGCCGCCGCTCAGACGGTTCATGTTGTCGGAGACTCCACCGGTTGGACGATTCCACAGGAACCCACTTTCTATTCCGATTGGGCTTCTAAAAACAACTTCGTTGTTGGCGATTCTCTAAGTATGAATAATATAATGTTCTCTCTATCTTTTCTTTTAGATTTAAGTTTAGTTTTTAAATTTTCATTCGATCTGTTTACCTTCTATAATTAAGTTTTTTTATTTTAATTATTTATTTATCTGAGTTGTTGTGCTTAGAAATTATAATAAAATAATCTAAACATAGTTTAACTGACCGTTGAGAAATATAGTTCAATTATAGACTGTACTTTAAGGTTTTGTCTTTAAAGGTTTGAATTTCTACCCGTCATATTTTGTTGAGCTAAACAAATTGATTGTAATAATCTTCAAAACTTCTAATTTTGTGTTTAATGAATCTATATATGTTATTTGCTTTATTTTAATGTTGTTGAAGTATTGATAAAAAAAAAATGAAATTTTAGTACTATCTTATATGGAAATTTTTTCATACTATTCTCTTTTATTACTTGCCACGTCAGCATTTTTTTTAATGAAATTATGTGGGCAAAATTAATATTTATAAATTAAAAAAACATAGTGTGAACTGTGAACAAAATGAATATAGTACTCTGGTAGTACTAGATTTTTTTTTTCAATATTTAACATAGTATTAAAATAAGAAGACCATATTCAAAGTTTTTTAATGTTATTTCTTTCATAATTAATATCGATAACTATTTGTTGCCCTTTGATAAGATATTCAATCCCAATAAAAAGTTAAATTTTGCAACTCATCCCACTTAACTTTTTAGGTTGATCAAATCTCCTAAGTTTAGGATCCTATATACTTGTGCATAACTCAACTGCCATCAAGTATGCCTTACGAGTAAAAAGAAAGTCATGGGTTCGAATCCTTCAACTCTAATTGTTGGTGTACTAAAAAAAACCTATATACTTATTATGGACACAATGATAGAAGTTTATAAAAAACTTATATTAACCTAAATTTAATAACAATATCATTTGTTAGTAAGGTTCTAAAATTTATGTTGCATTTTGCAGCATTTAACTTCGGGACCTTCACGCACGATGTACTTAAAGTAACAAAAAAGTCGTTTGATACGTGCAATTCCGACGACGGAATCGGCAATGCCCTCACAACGGGTCCTGCAACAGTGAAGCTCGACACCGCCGGCGTACATTACTTCATCTGTACCGTCGGTAAACACTGTCAGGGAGGCCAAAAGTTATCCGTCACCGTCTCCGCCACGTCCGGTGGTGCATTGCCACCTTCTTCGAACACTCCTCATCCACCGGCAAAAACTTCTCCGACTGCGACAACTCCTGCTCAAGACGATGCCTATCCTCCAACTGCAAATTCACCATCTTCGTCACCATCGAACGGTGGCGGATCTCCAATCGCTCCGGCACCTTCTTCCTCCACTGCAGTGATGGCAACCCTTTATGTCACTTTGTCCGCCATTGTTATGAGCTTCTTGTTCTAG

mRNA sequence

ATGGCCGCCGAAGTTGGTTTTGTTCTTGGTTTAATTGCGGTGGTTTTTCTTCAACATGCCGCCGCTCAGACGGTTCATGTTGTCGGAGACTCCACCGGTTGGACGATTCCACAGGAACCCACTTTCTATTCCGATTGGGCTTCTAAAAACAACTTCGTTGTTGGCGATTCTCTAACATTTAACTTCGGGACCTTCACGCACGATGTACTTAAAGTAACAAAAAAGTCGTTTGATACGTGCAATTCCGACGACGGAATCGGCAATGCCCTCACAACGGGTCCTGCAACAGTGAAGCTCGACACCGCCGGCGTACATTACTTCATCTGTACCGTCGGTAAACACTGTCAGGGAGGCCAAAAGTTATCCGTCACCGTCTCCGCCACGTCCGGTGGTGCATTGCCACCTTCTTCGAACACTCCTCATCCACCGGCAAAAACTTCTCCGACTGCGACAACTCCTGCTCAAGACGATGCCTATCCTCCAACTGCAAATTCACCATCTTCGTCACCATCGAACGGTGGCGGATCTCCAATCGCTCCGGCACCTTCTTCCTCCACTGCAGTGATGGCAACCCTTTATGTCACTTTGTCCGCCATTGTTATGAGCTTCTTGTTCTAG

Coding sequence (CDS)

ATGGCCGCCGAAGTTGGTTTTGTTCTTGGTTTAATTGCGGTGGTTTTTCTTCAACATGCCGCCGCTCAGACGGTTCATGTTGTCGGAGACTCCACCGGTTGGACGATTCCACAGGAACCCACTTTCTATTCCGATTGGGCTTCTAAAAACAACTTCGTTGTTGGCGATTCTCTAACATTTAACTTCGGGACCTTCACGCACGATGTACTTAAAGTAACAAAAAAGTCGTTTGATACGTGCAATTCCGACGACGGAATCGGCAATGCCCTCACAACGGGTCCTGCAACAGTGAAGCTCGACACCGCCGGCGTACATTACTTCATCTGTACCGTCGGTAAACACTGTCAGGGAGGCCAAAAGTTATCCGTCACCGTCTCCGCCACGTCCGGTGGTGCATTGCCACCTTCTTCGAACACTCCTCATCCACCGGCAAAAACTTCTCCGACTGCGACAACTCCTGCTCAAGACGATGCCTATCCTCCAACTGCAAATTCACCATCTTCGTCACCATCGAACGGTGGCGGATCTCCAATCGCTCCGGCACCTTCTTCCTCCACTGCAGTGATGGCAACCCTTTATGTCACTTTGTCCGCCATTGTTATGAGCTTCTTGTTCTAG

Protein sequence

MAAEVGFVLGLIAVVFLQHAAAQTVHVVGDSTGWTIPQEPTFYSDWASKNNFVVGDSLTFNFGTFTHDVLKVTKKSFDTCNSDDGIGNALTTGPATVKLDTAGVHYFICTVGKHCQGGQKLSVTVSATSGGALPPSSNTPHPPAKTSPTATTPAQDDAYPPTANSPSSSPSNGGGSPIAPAPSSSTAVMATLYVTLSAIVMSFLF

Homology

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BLAST of Tan0000398.1 vs. ExPASy Swiss-Prot
Match: P29602 (Cucumber peeling cupredoxin OS=Cucumis sativus OX=3659 PE=1 SV=3)

HSP 1 Score: 117.5 bits (293), Expect = 1.8e-25
Identity = 65/147 (44.22%), Postives = 85/147 (57.82%), Query Frame = 0


Query: 24  TVHVVGDSTGWTIPQEPTFYSDWASKNNFVVGDSLTFNFGTFTHDVLKV-TKKSFDTCNS 83
           TVH+VGD+TGW++P  P FYS WA+   F VGDSL FNF    H+V ++ TK+SFD CN 
Sbjct: 3   TVHIVGDNTGWSVPSSPNFYSQWAAGKTFRVGDSLQFNFPANAHNVHEMETKQSFDACNF 62

Query: 84  DDGIGNALTTGPATVKLDTAGVHYFICTVGKHCQGGQKLSVTVSATSGGALPPSSNTPHP 143
            +   +   T P   +LD  G+HYF+CTVG HC  GQKLS+ V A +     P      P
Sbjct: 63  VNSDNDVERTSPVIERLDELGMHYFVCTVGTHCSNGQKLSINVVAANATVSMP------P 122

Query: 144 PAKTSPTATTPAQDDAYPPTANSPSSS 170
           P+ + P++  P      PP    PS S
Sbjct: 123 PSSSPPSSVMP------PPVMPPPSPS 137

[Close]

BLAST of Tan0000398.1 vs. ExPASy Swiss-Prot
Match: Q07488 (Blue copper protein OS=Arabidopsis thaliana OX=3702 GN=BCB PE=2 SV=2)

HSP 1 Score: 107.5 bits (267), Expect = 1.9e-22
Identity = 70/178 (39.33%), Postives = 96/178 (53.93%), Query Frame = 0


Query: 28  VGDSTGWTIPQEPTFYSDWASKNNFVVGDSLTFNFGTFTHDVLKVTKKSFDTCNSDDGIG 87
           VGD T WT P +P FY+ WA+   F VGD L F+F    HDV  V++ +F+ C  +  I 
Sbjct: 27  VGDDTEWTRPMDPEFYTTWATGKTFRVGDELEFDFAAGRHDVAVVSEAAFENCEKEKPIS 86

Query: 88  NALTTGPATVKLDTAGVHYFICTVGKHCQGGQKLSVTVSA--TSGGALPPSSNTPHPPAK 147
           + +T  P  + L+T G  YFICTVG HC+ GQKLS+TV A   +GGA P +  TP P   
Sbjct: 87  H-MTVPPVKIMLNTTGPQYFICTVGDHCRFGQKLSITVVAAGATGGATPGAGATPAP--- 146

Query: 148 TSPTATTPAQDDAYPPTANSPSSSPSNGGGSPIAPAPSSSTAVMATLYVTLSAIVMSF 204
                +TP+     PPTA   ++   + G +  A   +SS      L   +SA+V  F
Sbjct: 147 ----GSTPSTGGTTPPTAGGTTTPSGSSGTTTPAGNAASSLGGATFLVAFVSAVVALF 196

[Close]

BLAST of Tan0000398.1 vs. ExPASy Swiss-Prot
Match: P42849 (Umecyanin OS=Armoracia rusticana OX=3704 PE=1 SV=1)

HSP 1 Score: 99.0 bits (245), Expect = 6.7e-20
Identity = 50/110 (45.45%), Postives = 63/110 (57.27%), Query Frame = 0


Query: 28  VGDSTGWTIPQEPTFYSDWASKNNFVVGDSLTFNFGTFTHDVLKVTKKSFDTCNSDDGIG 87
           VG    W  P +P FY  WA+   F VGD L F+F    HDV  VTK +FD C  ++ I 
Sbjct: 5   VGGDMEWKRPSDPKFYITWATGKTFRVGDELEFDFAAGMHDVAVVTKDAFDNCKKENPIS 64

Query: 88  NALTTGPATVKLDTAGVHYFICTVGKHCQGGQKLSVTV---SATSGGALP 135
           + +TT P  + L+T G  Y+ICTVG HC+ GQKLS+ V       GGA P
Sbjct: 65  H-MTTPPVKIMLNTTGPQYYICTVGDHCRVGQKLSINVVGAGGAGGGATP 113

[Close]

BLAST of Tan0000398.1 vs. ExPASy Swiss-Prot
Match: Q41001 (Blue copper protein OS=Pisum sativum OX=3888 PE=2 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 1.1e-19
Identity = 66/163 (40.49%), Postives = 91/163 (55.83%), Query Frame = 0


Query: 11  LIAVVFLQHAAAQTVHVVGDSTGWTIPQEPTFYSDWASKNNFVVGDSLTFNFGTFTHDVL 70
           L+A++ +   +  TV+ VGD++GW I  +   YS WAS   F VGDSL FN+G   H V 
Sbjct: 12  LLAIINMALPSLATVYTVGDTSGWVIGGD---YSTWASDKTFAVGDSLVFNYGAGAHTVD 71

Query: 71  KVTKKSFDTCNSDDGIGNALTTGPATVKLDTAGVHYFICTVGKHCQGGQKLSVTVSATSG 130
           +V +  + +C S + I    +TG  T+ L  AG HYFIC V  H  GG KLS+ V A+SG
Sbjct: 72  EVKESDYKSCTSGNSISTD-STGATTIPLKKAGKHYFICGVPGHSTGGMKLSIKVKASSG 131

Query: 131 GALPPSSNTPHPPAKTSPTA--TTPAQDDAYPPTANSPSSSPS 172
            +  PS+ TP    K SP++  T  A      PT  + SS+ S
Sbjct: 132 SSAAPSA-TPSSSGKGSPSSDDTPAATTTTTTPTKQNESSATS 169

[Close]

BLAST of Tan0000398.1 vs. ExPASy Swiss-Prot
Match: P80728 (Mavicyanin OS=Cucurbita pepo OX=3663 PE=1 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 6.2e-18
Identity = 49/109 (44.95%), Postives = 64/109 (58.72%), Query Frame = 0


Query: 24  TVHVVGDSTGWTIPQEPTFYSDWASKNNFVVGDSLTFNFGTFTHDVLKVTKKSFDTCNSD 83
           TVH VGDSTGWT    P  Y+ WAS N F VGDSL FN+    H+VL+V ++ F +CNS 
Sbjct: 2   TVHKVGDSTGWT-TLVPYDYAKWASSNKFHVGDSLLFNYNNKFHNVLQVDQEQFKSCNSS 61

Query: 84  DGIGNALTTGPATVKLDTAGVHYFICTVGKHCQGGQKLSVTVSATSGGA 133
                + T+G  ++ L   G  YF+C +  HCQ GQK+ + V   S  A
Sbjct: 62  SPAA-SYTSGADSIPLKRPGTFYFLCGIPGHCQLGQKVEIKVDPGSSSA 108

[Close]

BLAST of Tan0000398.1 vs. NCBI nr
Match: XP_038899418.1 (cucumber peeling cupredoxin-like [Benincasa hispida])

HSP 1 Score: 259.2 bits (661), Expect = 2.9e-65
Identity = 146/208 (70.19%), Postives = 166/208 (79.81%), Query Frame = 0


Query: 1   MAAEVGFVLGLIAVVFLQHAAAQTVHVVGDSTGWTIPQ-EPTFYSDWASKNNFVVGDSLT 60
           M   VG VLGLIAVVF+ HA  +TVHVVG+S GWT+PQ    FYSDWA++NNF + DSLT
Sbjct: 1   MGRGVGLVLGLIAVVFVHHATGETVHVVGNSDGWTVPQGGAAFYSDWAARNNFFIRDSLT 60

Query: 61  FNFGTFTHDVLKVTKKSFDTCNSDDGIGNALTTGPATVKLDTAGVHYFICTVGKHCQGGQ 120
           FNF T  HDVLKVTK+SFD CNS++ IGN +TTGPATVKLDTAGVHYFICTVG+HC GGQ
Sbjct: 61  FNFETNMHDVLKVTKESFDACNSNNAIGNVITTGPATVKLDTAGVHYFICTVGRHCFGGQ 120

Query: 121 KLSVTVSA-TSGGALPPSSNTPHPPAKTSPTATTPAQDDAYPPT-ANSPSSSPSNGGGSP 180
           KLSVTVSA T GGA+PPS+NT  PPA  +P     + D+A  PT ANSPSSSP   GG+P
Sbjct: 121 KLSVTVSANTHGGAIPPSTNTSRPPAANTPI----SHDNACAPTPANSPSSSPPIHGGTP 180

Query: 181 IAPAPSSSTAVMATLYVTLSAIVMSFLF 206
            APAPSSST +MATLYVTLSA+VMS LF
Sbjct: 181 SAPAPSSSTVLMATLYVTLSALVMSLLF 204

[Close]

BLAST of Tan0000398.1 vs. NCBI nr
Match: XP_038899977.1 (cucumber peeling cupredoxin-like [Benincasa hispida])

HSP 1 Score: 253.1 bits (645), Expect = 2.1e-63
Identity = 145/207 (70.05%), Postives = 158/207 (76.33%), Query Frame = 0


Query: 1   MAAEVGFVLGLIAVVFLQHAAAQTVHVVGDSTGWTIPQEPTFYSDWASKNNFVVGDSLTF 60
           MA  VGFVLGLIAVVF+ HA A TVHVVGD+TGWTIP   TFYSDWA KN F VGDSL+F
Sbjct: 1   MAGGVGFVLGLIAVVFVHHATA-TVHVVGDATGWTIPSSTTFYSDWADKNTFAVGDSLSF 60

Query: 61  NFGTFTHDVLKVTKKSFDTCNSDDGIGNALTTGPATVKLDTAGVHYFICTVGKHCQGGQK 120
            F T +HDVLKV+K+SF+ CN DDGIGN LTTGPATVKLDTAGVHYFICTVGKHC GGQK
Sbjct: 61  KFMTGSHDVLKVSKESFEACNIDDGIGNTLTTGPATVKLDTAGVHYFICTVGKHCSGGQK 120

Query: 121 LSVTV--SATSGGALPPSSNTPHPPAKTSPTATTPAQDDAYPPTANSPSSSPSNGGGSPI 180
           L+VTV  SAT GGA+ PS NT   P  T   A++P+            SSS  N GGSP 
Sbjct: 121 LAVTVSGSATPGGAVAPSPNTTDKPLVTPTPASSPS------------SSSVENEGGSPA 180

Query: 181 APAPSSSTAVMATLYVTLSAIVMSFLF 206
           APAPSSSTAVMAT YVTLSAIVM+ LF
Sbjct: 181 APAPSSSTAVMATFYVTLSAIVMNMLF 194

[Close]

BLAST of Tan0000398.1 vs. NCBI nr
Match: XP_004136088.1 (cucumber peeling cupredoxin-like [Cucumis sativus] >KGN45266.1 hypothetical protein Csa_016411 [Cucumis sativus])

HSP 1 Score: 251.5 bits (641), Expect = 6.1e-63
Identity = 143/206 (69.42%), Postives = 157/206 (76.21%), Query Frame = 0


Query: 1   MAAEVGFVLGLIAVVFLQHAAAQTVHVVGDSTGWTIPQ-EPTFYSDWASKNNFVVGDSLT 60
           M+ EVG VLGLIAVVF+ HA AQT+HVVGDS GWT+PQ    FYSDWAS+NNF VGDSLT
Sbjct: 1   MSGEVGIVLGLIAVVFVHHATAQTIHVVGDSDGWTVPQGGAAFYSDWASRNNFSVGDSLT 60

Query: 61  FNFGTFTHDVLKVTKKSFDTCNSDDGIGNALTTGPATVKLDTAGVHYFICTVGKHCQGGQ 120
           FNF T  HDVLKVTK+SFD CNS++ IGN +TTGPATVKLD AG+HYFICTVG HC GGQ
Sbjct: 61  FNFRTNMHDVLKVTKESFDACNSNNAIGNVITTGPATVKLDAAGMHYFICTVGTHCLGGQ 120

Query: 121 KLSVTVSATSGGALPPSSNTPHPPAKTSPTATTPAQDDAYPPTANSPSSSPSNGGGSPIA 180
           KLSVTVSA SGG +PPSSNTPHP             +DA  PT    SS P  GG SP A
Sbjct: 121 KLSVTVSA-SGGTMPPSSNTPHP------------HNDACAPT--PASSPPIRGGLSPSA 180

Query: 181 PAPSSSTAVMATLYVTLSAIVMSFLF 206
             PSSSTA+M TLYVTLSAI+MS LF
Sbjct: 181 LTPSSSTALMTTLYVTLSAIIMSLLF 191

[Close]

BLAST of Tan0000398.1 vs. NCBI nr
Match: XP_022151423.1 (cucumber peeling cupredoxin-like [Momordica charantia])

HSP 1 Score: 250.4 bits (638), Expect = 1.4e-62
Identity = 139/200 (69.50%), Postives = 160/200 (80.00%), Query Frame = 0


Query: 5   VGFVLGLIAVVFLQHAAAQTVHVVGDSTGWTIPQ-EPTFYSDWASKNNFVVGDSLTFNFG 64
           +  VLG +A V  Q AAAQTVHVVGD+TGWT+PQ   TFYSDWA++ NFV GDSLTF FG
Sbjct: 6   IALVLGFVAAVLAQQAAAQTVHVVGDATGWTVPQGGATFYSDWAARRNFVAGDSLTFTFG 65

Query: 65  TFTHDVLKVTKKSFDTCNSDDGIGNALTTGPATVKLDTAGVHYFICTVGKHCQGGQKLSV 124
           T  HDVL+VTK+SFD C+SD+ IGN +TTGPATVKL+ AGVHY+ICTVG+HC GGQKLS+
Sbjct: 66  TNAHDVLEVTKESFDACSSDNAIGNVITTGPATVKLNAAGVHYYICTVGRHCLGGQKLSI 125

Query: 125 TVSATSGGALPPSSNTPHPPAKTSPTATTPAQDDAYPPTANSPSSSPSNGGGSPIAPAPS 184
           TVSAT GGA  PS NTP PP  T+P   + A DDA  P A SPSSSP NGGGS  AP PS
Sbjct: 126 TVSATPGGA-GPSPNTPRPPPATTP---SHANDDACAP-AGSPSSSPPNGGGSQSAPPPS 185

Query: 185 SSTAVMATLYVTLSAIVMSF 204
           SS+AVMA+++VTLSAIVMSF
Sbjct: 186 SSSAVMASIFVTLSAIVMSF 200

[Close]

BLAST of Tan0000398.1 vs. NCBI nr
Match: XP_038899950.1 (cucumber peeling cupredoxin-like [Benincasa hispida])

HSP 1 Score: 245.4 bits (625), Expect = 4.4e-61
Identity = 138/202 (68.32%), Postives = 152/202 (75.25%), Query Frame = 0


Query: 1   MAAEVGFVLGLIAVVFLQHAAAQTVHVVGDSTGWTIPQEPTFYSDWASKNNFVVGDSLTF 60
           MA  VGFVLG IAVVF+QHA A TVHVVGD+ GWT+P   TFYSDWA +N FVVGDSL+F
Sbjct: 1   MAGGVGFVLGFIAVVFVQHATA-TVHVVGDTVGWTVPPGNTFYSDWADENTFVVGDSLSF 60

Query: 61  NFGTFTHDVLKVTKKSFDTCNSDDGIGNALTTGPATVKLDTAGVHYFICTVGKHCQGGQK 120
            F T  HDVLKVTK+SF+ C+SD GIGN LTTGPATVKLDTAG+HYFICTVGKHC GGQK
Sbjct: 61  KFPTGAHDVLKVTKESFEACSSDKGIGNVLTTGPATVKLDTAGMHYFICTVGKHCSGGQK 120

Query: 121 LSVTVSATSGGALPPSSNTPHPPAKTSPTATTPAQDDAYPPTANSPSSSPSNGGGSPIAP 180
           LS++VSA SGGA+ PSS                    A P  ANSPSSS  N  GSP AP
Sbjct: 121 LSISVSAASGGAMSPSSL-------------------ATPTPANSPSSSLPNESGSPTAP 180

Query: 181 APSSSTAVMATLYVTLSAIVMS 203
           APSSSTAV AT+YVTLSAIVM+
Sbjct: 181 APSSSTAVTATIYVTLSAIVMN 182

[Close]

BLAST of Tan0000398.1 vs. ExPASy TrEMBL
Match: A0A0A0KBU0 (Phytocyanin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G432480 PE=4 SV=1)

HSP 1 Score: 251.5 bits (641), Expect = 3.0e-63
Identity = 143/206 (69.42%), Postives = 157/206 (76.21%), Query Frame = 0


Query: 1   MAAEVGFVLGLIAVVFLQHAAAQTVHVVGDSTGWTIPQ-EPTFYSDWASKNNFVVGDSLT 60
           M+ EVG VLGLIAVVF+ HA AQT+HVVGDS GWT+PQ    FYSDWAS+NNF VGDSLT
Sbjct: 1   MSGEVGIVLGLIAVVFVHHATAQTIHVVGDSDGWTVPQGGAAFYSDWASRNNFSVGDSLT 60

Query: 61  FNFGTFTHDVLKVTKKSFDTCNSDDGIGNALTTGPATVKLDTAGVHYFICTVGKHCQGGQ 120
           FNF T  HDVLKVTK+SFD CNS++ IGN +TTGPATVKLD AG+HYFICTVG HC GGQ
Sbjct: 61  FNFRTNMHDVLKVTKESFDACNSNNAIGNVITTGPATVKLDAAGMHYFICTVGTHCLGGQ 120

Query: 121 KLSVTVSATSGGALPPSSNTPHPPAKTSPTATTPAQDDAYPPTANSPSSSPSNGGGSPIA 180
           KLSVTVSA SGG +PPSSNTPHP             +DA  PT    SS P  GG SP A
Sbjct: 121 KLSVTVSA-SGGTMPPSSNTPHP------------HNDACAPT--PASSPPIRGGLSPSA 180

Query: 181 PAPSSSTAVMATLYVTLSAIVMSFLF 206
             PSSSTA+M TLYVTLSAI+MS LF
Sbjct: 181 LTPSSSTALMTTLYVTLSAIIMSLLF 191

[Close]

BLAST of Tan0000398.1 vs. ExPASy TrEMBL
Match: A0A6J1DC50 (cucumber peeling cupredoxin-like OS=Momordica charantia OX=3673 GN=LOC111019357 PE=4 SV=1)

HSP 1 Score: 250.4 bits (638), Expect = 6.6e-63
Identity = 139/200 (69.50%), Postives = 160/200 (80.00%), Query Frame = 0


Query: 5   VGFVLGLIAVVFLQHAAAQTVHVVGDSTGWTIPQ-EPTFYSDWASKNNFVVGDSLTFNFG 64
           +  VLG +A V  Q AAAQTVHVVGD+TGWT+PQ   TFYSDWA++ NFV GDSLTF FG
Sbjct: 6   IALVLGFVAAVLAQQAAAQTVHVVGDATGWTVPQGGATFYSDWAARRNFVAGDSLTFTFG 65

Query: 65  TFTHDVLKVTKKSFDTCNSDDGIGNALTTGPATVKLDTAGVHYFICTVGKHCQGGQKLSV 124
           T  HDVL+VTK+SFD C+SD+ IGN +TTGPATVKL+ AGVHY+ICTVG+HC GGQKLS+
Sbjct: 66  TNAHDVLEVTKESFDACSSDNAIGNVITTGPATVKLNAAGVHYYICTVGRHCLGGQKLSI 125

Query: 125 TVSATSGGALPPSSNTPHPPAKTSPTATTPAQDDAYPPTANSPSSSPSNGGGSPIAPAPS 184
           TVSAT GGA  PS NTP PP  T+P   + A DDA  P A SPSSSP NGGGS  AP PS
Sbjct: 126 TVSATPGGA-GPSPNTPRPPPATTP---SHANDDACAP-AGSPSSSPPNGGGSQSAPPPS 185

Query: 185 SSTAVMATLYVTLSAIVMSF 204
           SS+AVMA+++VTLSAIVMSF
Sbjct: 186 SSSAVMASIFVTLSAIVMSF 200

[Close]

BLAST of Tan0000398.1 vs. ExPASy TrEMBL
Match: A0A0A0K6Y7 (Phytocyanin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G432500 PE=4 SV=1)

HSP 1 Score: 242.3 bits (617), Expect = 1.8e-60
Identity = 137/208 (65.87%), Postives = 155/208 (74.52%), Query Frame = 0


Query: 1   MAAEVGFVLGLIAVVFLQHAAAQTVHVVGDSTGWTIPQEPTFYSDWASKNNFVVGDSLTF 60
           MA  VGFVLG IAVVF+ HAAAQ VHVVG++TGWTIP   TFYS+WA KN F VGDSL+F
Sbjct: 1   MAGRVGFVLGFIAVVFVHHAAAQKVHVVGETTGWTIPSTETFYSEWADKNTFAVGDSLSF 60

Query: 61  NFGTFTHDVLKVTKKSFDTCNSDDGIGNALTTGPATVKLDTAGVHYFICTVGKHCQGGQK 120
            F T  HDVL+V K+SF+ CNSD  IG+ALTTGPATVKLDTAGVHYFICTVGKHC GGQK
Sbjct: 61  KFLTGAHDVLQVPKESFEACNSDKAIGSALTTGPATVKLDTAGVHYFICTVGKHCLGGQK 120

Query: 121 LSVTVSATS---GGALPPSSNTPHPPAKTSPTATTPAQDDAYPPTANSPSSSPSNGGGSP 180
           L+VTVS++S   GGA+ PS +T   P+                 TANSPSSS    G +P
Sbjct: 121 LAVTVSSSSTTPGGAVSPSPSTSEEPS----------------TTANSPSSSVPKSGETP 180

Query: 181 IAPAPSSSTAVMATLYVTLSAIVMSFLF 206
            APAPSSSTAVMAT+YVTLSA VM+ LF
Sbjct: 181 AAPAPSSSTAVMATIYVTLSAFVMNLLF 192

[Close]

BLAST of Tan0000398.1 vs. ExPASy TrEMBL
Match: A0A5A7UZ38 (Cucumber peeling cupredoxin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold339G002230 PE=4 SV=1)

HSP 1 Score: 239.6 bits (610), Expect = 1.2e-59
Identity = 139/215 (64.65%), Postives = 164/215 (76.28%), Query Frame = 0


Query: 1   MAAEVGFVLGLIAVVFLQHAAAQTVHVVGDSTGWTIPQEPTFYSDWASKNNFVVGDSLTF 60
           MA  +GFVL  IAVVF+ HAAAQ VHVVGD+TGWTIP   TFYS+WA KN F VGDSL+F
Sbjct: 1   MAGGIGFVLSFIAVVFVHHAAAQKVHVVGDATGWTIPPATTFYSEWADKNTFAVGDSLSF 60

Query: 61  NFGTFTHDVLKVTKKSFDTCNSDDGIGNALTTGPATVKLDTAGVHYFICTVGKHCQGGQK 120
            F T +HDVLKV+K+SF+ C++D GIG+ LTTGPATVKLDTAG HYFIC+VGKHC GGQK
Sbjct: 61  KFTTGSHDVLKVSKESFEACSTDKGIGSPLTTGPATVKLDTAGEHYFICSVGKHCLGGQK 120

Query: 121 LSVTVSAT---SGGALPPSSNTPHPPAKT-----SPTATTPAQDDAYPPTANSPSSSPS- 180
           L+VTVS +   +GGA+ PS +T   P+KT     SP+++ P   D   P+ANSPSSS S 
Sbjct: 121 LAVTVSGSGTPAGGAVSPSPSTTEEPSKTLAPANSPSSSVPKVGD--EPSANSPSSSSSV 180

Query: 181 -NGGGSPIAPAPSSSTAVMATLYVTLSAIVMSFLF 206
                SP APAPSSST VMAT+YVTLSAIVM+ LF
Sbjct: 181 PKDAESPAAPAPSSSTVVMATVYVTLSAIVMNLLF 213

[Close]

BLAST of Tan0000398.1 vs. ExPASy TrEMBL
Match: A0A1S3CDZ6 (cucumber peeling cupredoxin-like OS=Cucumis melo OX=3656 GN=LOC103499801 PE=4 SV=1)

HSP 1 Score: 239.6 bits (610), Expect = 1.2e-59
Identity = 139/215 (64.65%), Postives = 164/215 (76.28%), Query Frame = 0


Query: 1   MAAEVGFVLGLIAVVFLQHAAAQTVHVVGDSTGWTIPQEPTFYSDWASKNNFVVGDSLTF 60
           MA  +GFVL  IAVVF+ HAAAQ VHVVGD+TGWTIP   TFYS+WA KN F VGDSL+F
Sbjct: 1   MAGGIGFVLSFIAVVFVHHAAAQKVHVVGDATGWTIPPATTFYSEWADKNTFAVGDSLSF 60

Query: 61  NFGTFTHDVLKVTKKSFDTCNSDDGIGNALTTGPATVKLDTAGVHYFICTVGKHCQGGQK 120
            F T +HDVLKV+K+SF+ C++D GIG+ LTTGPATVKLDTAG HYFIC+VGKHC GGQK
Sbjct: 61  KFTTGSHDVLKVSKESFEACSTDKGIGSPLTTGPATVKLDTAGEHYFICSVGKHCLGGQK 120

Query: 121 LSVTVSAT---SGGALPPSSNTPHPPAKT-----SPTATTPAQDDAYPPTANSPSSSPS- 180
           L+VTVS +   +GGA+ PS +T   P+KT     SP+++ P   D   P+ANSPSSS S 
Sbjct: 121 LAVTVSGSGTPAGGAVSPSPSTTEEPSKTLAPANSPSSSVPKVGD--EPSANSPSSSSSV 180

Query: 181 -NGGGSPIAPAPSSSTAVMATLYVTLSAIVMSFLF 206
                SP APAPSSST VMAT+YVTLSAIVM+ LF
Sbjct: 181 PKDAESPAAPAPSSSTVVMATVYVTLSAIVMNLLF 213

[Close]

BLAST of Tan0000398.1 vs. TAIR 10
Match: AT5G20230.1 (blue-copper-binding protein )

HSP 1 Score: 107.5 bits (267), Expect = 1.3e-23
Identity = 70/178 (39.33%), Postives = 96/178 (53.93%), Query Frame = 0


Query: 28  VGDSTGWTIPQEPTFYSDWASKNNFVVGDSLTFNFGTFTHDVLKVTKKSFDTCNSDDGIG 87
           VGD T WT P +P FY+ WA+   F VGD L F+F    HDV  V++ +F+ C  +  I 
Sbjct: 27  VGDDTEWTRPMDPEFYTTWATGKTFRVGDELEFDFAAGRHDVAVVSEAAFENCEKEKPIS 86

Query: 88  NALTTGPATVKLDTAGVHYFICTVGKHCQGGQKLSVTVSA--TSGGALPPSSNTPHPPAK 147
           + +T  P  + L+T G  YFICTVG HC+ GQKLS+TV A   +GGA P +  TP P   
Sbjct: 87  H-MTVPPVKIMLNTTGPQYFICTVGDHCRFGQKLSITVVAAGATGGATPGAGATPAP--- 146

Query: 148 TSPTATTPAQDDAYPPTANSPSSSPSNGGGSPIAPAPSSSTAVMATLYVTLSAIVMSF 204
                +TP+     PPTA   ++   + G +  A   +SS      L   +SA+V  F
Sbjct: 147 ----GSTPSTGGTTPPTAGGTTTPSGSSGTTTPAGNAASSLGGATFLVAFVSAVVALF 196

[Close]

BLAST of Tan0000398.1 vs. TAIR 10
Match: AT5G26330.1 (Cupredoxin superfamily protein )

HSP 1 Score: 76.3 bits (186), Expect = 3.3e-14
Identity = 55/167 (32.93%), Postives = 86/167 (51.50%), Query Frame = 0


Query: 8   VLGLIAVVFLQHAAAQTVHVVGDSTGWTIPQEPTFYSDWASKNNFVVGDSLTFNFGTFTH 67
           V  L  +V +   +   V+ VGDS GWT       Y  WAS   F +GD++ F +    H
Sbjct: 6   VAALACIVVMLRLSEAAVYKVGDSAGWTTIAN-VDYKLWASTKTFHIGDTVLFEYNPQFH 65

Query: 68  DVLKVTKKSFDTCNSDDGIGNALTTGPATVKLDTAGVHYFICTVGKHCQGGQKLSVTV-- 127
           +V++VT   + +CN+   I +  TTG  ++ L   G H+F C V  HC  GQKL + V  
Sbjct: 66  NVMRVTHPMYRSCNTSKPI-STFTTGNDSITLTNHGHHFFFCGVPGHCLAGQKLDLHVLL 125

Query: 128 -SATSGGALPPSSNTPHPPAKTSPTATTPAQDDAYPPTANSPSSSPS 172
            ++++  + PP+S++  PP+ T P A  P       P+ +  +S PS
Sbjct: 126 PASSTPLSDPPTSSSSSPPSTTIPAAGVPG------PSPSLAASLPS 164

[Close]

BLAST of Tan0000398.1 vs. TAIR 10
Match: AT2G23990.1 (early nodulin-like protein 11 )

HSP 1 Score: 74.3 bits (181), Expect = 1.3e-13
Identity = 64/185 (34.59%), Postives = 96/185 (51.89%), Query Frame = 0


Query: 8   VLGLIAVVFLQHAAAQTVHVVGDSTGWTIPQEPTF-YSDWASKNNFVVGDSLTFNFGTFT 67
           V+ L+   F     A+ ++V G    W +P+ P    + WA    F VGD+L F + +  
Sbjct: 10  VVFLLFTTFYHFGEARIINVGGSLDAWKVPESPNHSLNHWAESVRFQVGDALLFKYDSKI 69

Query: 68  HDVLKVTKKSFDTCNSDDGIGNALTTGPATVKLDTAGVHYFIC-TVGKHCQGGQKLSVTV 127
             VL+VTK++++ CN+   +      G  TVKLD +G +YFI      +C  G+K++V V
Sbjct: 70  DSVLQVTKENYEKCNTQKPL-EEHKDGYTTVKLDVSGPYYFISGAPSGNCAKGEKVTVVV 129

Query: 128 SATSGGALPPSSNTPHPPAKTSPTATTPAQDDAYPPTANSPSSSPSNGGGSPIAPAPSSS 187
            + +     P++ TP  P K S   TTPA     PPT  SP SS S    +P APA SS+
Sbjct: 130 QSPNHPKPGPAAVTPTLPPKPS---TTPAAPAPAPPTP-SPKSSTSTMAPAP-APAKSSA 188

Query: 188 TAVMA 191
             ++A
Sbjct: 190 VGLVA 188

[Close]

BLAST of Tan0000398.1 vs. TAIR 10
Match: AT3G20570.1 (early nodulin-like protein 9 )

HSP 1 Score: 73.9 bits (180), Expect = 1.6e-13
Identity = 63/197 (31.98%), Postives = 100/197 (50.76%), Query Frame = 0


Query: 10  GLIAVVFLQHAAAQTVHVVGDSTGWTIPQEPTFYSDWASKNNFVVGDSLTFNFGTFTHDV 69
           GL+  + +   A      VG +TGWT+P     YS WA ++ F +GDSL F + +    V
Sbjct: 14  GLLCFLMIVDRAYAREFTVGGATGWTVPSGSQVYSQWAEQSRFQIGDSLLFVYQSNQDSV 73

Query: 70  LKVTKKSFDTCNSDDGIGNALTTGPATVKLDTAGVHYFICTVGKHCQGGQKLSVTVSATS 129
           L+VT+ ++D+CN+D         G  +V L+ +G +YFI     +C+  +KL V V A  
Sbjct: 74  LQVTRDAYDSCNTDSPTAK-FADGKTSVTLNHSGPYYFISGNKDNCKKNEKLVVIVMADR 133

Query: 130 GGALPPSSNTPHP-PAKTSPTATTPAQDDAYPPTANSPSSSPSNGGGSPIAPAPSSSTAV 189
            G    +S+ P P PA +  +A +P     +  T   P+ +P+    +P + A  SS + 
Sbjct: 134 SGNKNTASSPPSPAPAPSGESAPSPPVSGTFEMT---PAPTPTTSEDTPNSAA--SSLSF 193

Query: 190 MATLYVTLSAIVMSFLF 206
           +A L   L A + S LF
Sbjct: 194 VAAL---LGAALASTLF 201

[Close]

BLAST of Tan0000398.1 vs. TAIR 10
Match: AT2G26720.1 (Cupredoxin superfamily protein )

HSP 1 Score: 71.6 bits (174), Expect = 8.1e-13
Identity = 62/188 (32.98%), Postives = 85/188 (45.21%), Query Frame = 0


Query: 11  LIAVVFLQHAAAQTVHVVGDSTGWTIPQEPTFYSDWASKNNFVVGDSLTFNFGTFTHDVL 70
           LI V     A   TVH VG++ GWT+      Y  WAS   F VGD+L F +    HDV 
Sbjct: 14  LIFVTLFGVAVGGTVHKVGNTKGWTMIGGD--YEAWASSRVFQVGDTLVFAYNKDYHDVT 73

Query: 71  KVTKKSFDTCNSDDGIGNALTTGPATVKLDTAGVHYFICTVGKHCQGGQKLSVTV-SATS 130
           +VT   F+ C S   +     TG  ++ L   G+ +FIC V  HC+ GQKL + V  A+ 
Sbjct: 74  EVTHNDFEMCESSKPL-RRYKTGSDSISLTKPGLQHFICGVPGHCKKGQKLQIHVLPASL 133

Query: 131 GGALPPSSNTPHPPAKTSPTATTPAQDDAYPPTANSPSSSPSNGGGSPIAPAPSSSTAVM 190
           G    P        + +S  + +P  D   PP  N+P           + P P+S +A  
Sbjct: 134 GHVAVPVPGPVRSQSSSSSPSPSPLVD---PPVNNAPQYQ--------MGPTPASHSAAS 187

Query: 191 ATLYVTLS 198
           A    T S
Sbjct: 194 ADFIFTFS 187

The following BLAST results are available for this feature:

BLAST of Tan0000398.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P29602	1.8e-25	44.22	Cucumber peeling cupredoxin OS=Cucumis sativus OX=3659 PE=1 SV=3	[more]
Q07488	1.9e-22	39.33	Blue copper protein OS=Arabidopsis thaliana OX=3702 GN=BCB PE=2 SV=2	[more]
P42849	6.7e-20	45.45	Umecyanin OS=Armoracia rusticana OX=3704 PE=1 SV=1	[more]
Q41001	1.1e-19	40.49	Blue copper protein OS=Pisum sativum OX=3888 PE=2 SV=1	[more]
P80728	6.2e-18	44.95	Mavicyanin OS=Cucurbita pepo OX=3663 PE=1 SV=1	[more]

BLAST of Tan0000398.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038899418.1	2.9e-65	70.19	cucumber peeling cupredoxin-like [Benincasa hispida]	[more]
XP_038899977.1	2.1e-63	70.05	cucumber peeling cupredoxin-like [Benincasa hispida]	[more]
XP_004136088.1	6.1e-63	69.42	cucumber peeling cupredoxin-like [Cucumis sativus] >KGN45266.1 hypothetical prot...	[more]
XP_022151423.1	1.4e-62	69.50	cucumber peeling cupredoxin-like [Momordica charantia]	[more]
XP_038899950.1	4.4e-61	68.32	cucumber peeling cupredoxin-like [Benincasa hispida]	[more]

BLAST of Tan0000398.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KBU0	3.0e-63	69.42	Phytocyanin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G432480...	[more]
A0A6J1DC50	6.6e-63	69.50	cucumber peeling cupredoxin-like OS=Momordica charantia OX=3673 GN=LOC111019357 ...	[more]
A0A0A0K6Y7	1.8e-60	65.87	Phytocyanin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G432500...	[more]
A0A5A7UZ38	1.2e-59	64.65	Cucumber peeling cupredoxin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27...	[more]
A0A1S3CDZ6	1.2e-59	64.65	cucumber peeling cupredoxin-like OS=Cucumis melo OX=3656 GN=LOC103499801 PE=4 SV...	[more]

BLAST of Tan0000398.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G20230.1	1.3e-23	39.33	blue-copper-binding protein	[more]
AT5G26330.1	3.3e-14	32.93	Cupredoxin superfamily protein	[more]
AT2G23990.1	1.3e-13	34.59	early nodulin-like protein 11	[more]
AT3G20570.1	1.6e-13	31.98	early nodulin-like protein 9	[more]
AT2G26720.1	8.1e-13	32.98	Cupredoxin superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008972	Cupredoxin	GENE3D	2.60.40.420		coord: 24..134 e-value: 7.5E-36 score: 124.7
IPR008972	Cupredoxin	SUPERFAMILY	49503	Cupredoxins	coord: 24..127
IPR003245	Phytocyanin domain	PFAM	PF02298	Cu_bind_like	coord: 34..119 e-value: 5.1E-24 score: 84.1
IPR003245	Phytocyanin domain	PROSITE	PS51485	PHYTOCYANIN	coord: 24..127 score: 41.972687
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 143..179
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 126..179
None	No IPR available	PANTHER	PTHR33021:SF189	STELLACYANIN	coord: 7..190
None	No IPR available	CDD	cd13920	Stellacyanin	coord: 24..125 e-value: 1.1559E-45 score: 144.763
IPR039391	Phytocyanin	PANTHER	PTHR33021	BLUE COPPER PROTEIN	coord: 7..190
IPR028871	Blue (type 1) copper protein, binding site	PROSITE	PS00196	COPPER_BLUE	coord: 103..119

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Tan0000398	Tan0000398	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Tan0000398.1-exon	Tan0000398.1-exon-LG06:3105218..3105392	exon
Tan0000398.1-exon	Tan0000398.1-exon-LG06:3106355..3106797	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Tan0000398.1-cds	Tan0000398.1-cds-LG06:3105218..3105392	CDS
Tan0000398.1-cds	Tan0000398.1-cds-LG06:3106355..3106797	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Tan0000398.1	Tan0000398.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0022900	electron transport chain
cellular_component	GO:0046658	anchored component of plasma membrane
molecular_function	GO:0009055	electron transfer activity