Tan0000398 (gene) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCCGCCGAAGTTGGTTTTGTTCTTGGTTTAATTGCGGTGGTTTTTCTTCAACATGCCGCCGCTCAGACGGTTCATGTTGTCGGAGACTCCACCGGTTGGACGATTCCACAGGAACCCACTTTCTATTCCGATTGGGCTTCTAAAAACAACTTCGTTGTTGGCGATTCTCTAAGTATGAATAATATAATGTTCTCTCTATCTTTTCTTTTAGATTTAAGTTTAGTTTTTAAATTTTCATTCGATCTGTTTACCTTCTATAATTAAGTTTTTTTATTTTAATTATTTATTTATCTGAGTTGTTGTGCTTAGAAATTATAATAAAATAATCTAAACATAGTTTAACTGACCGTTGAGAAATATAGTTCAATTATAGACTGTACTTTAAGGTTTTGTCTTTAAAGGTTTGAATTTCTACCCGTCATATTTTGTTGAGCTAAACAAATTGATTGTAATAATCTTCAAAACTTCTAATTTTGTGTTTAATGAATCTATATATGTTATTTGCTTTATTTTAATGTTGTTGAAGTATTGATAAAAAAAAAATGAAATTTTAGTACTATCTTATATGGAAATTTTTTCATACTATTCTCTTTTATTACTTGCCACGTCAGCATTTTTTTTAATGAAATTATGTGGGCAAAATTAATATTTATAAATTAAAAAAACATAGTGTGAACTGTGAACAAAATGAATATAGTACTCTGGTAGTACTAGATTTTTTTTTTCAATATTTAACATAGTATTAAAATAAGAAGACCATATTCAAAGTTTTTTAATGTTATTTCTTTCATAATTAATATCGATAACTATTTGTTGCCCTTTGATAAGATATTCAATCCCAATAAAAAGTTAAATTTTGCAACTCATCCCACTTAACTTTTTAGGTTGATCAAATCTCCTAAGTTTAGGATCCTATATACTTGTGCATAACTCAACTGCCATCAAGTATGCCTTACGAGTAAAAAGAAAGTCATGGGTTCGAATCCTTCAACTCTAATTGTTGGTGTACTAAAAAAAACCTATATACTTATTATGGACACAATGATAGAAGTTTATAAAAAACTTATATTAACCTAAATTTAATAACAATATCATTTGTTAGTAAGGTTCTAAAATTTATGTTGCATTTTGCAGCATTTAACTTCGGGACCTTCACGCACGATGTACTTAAAGTAACAAAAAAGTCGTTTGATACGTGCAATTCCGACGACGGAATCGGCAATGCCCTCACAACGGGTCCTGCAACAGTGAAGCTCGACACCGCCGGCGTACATTACTTCATCTGTACCGTCGGTAAACACTGTCAGGGAGGCCAAAAGTTATCCGTCACCGTCTCCGCCACGTCCGGTGGTGCATTGCCACCTTCTTCGAACACTCCTCATCCACCGGCAAAAACTTCTCCGACTGCGACAACTCCTGCTCAAGACGATGCCTATCCTCCAACTGCAAATTCACCATCTTCGTCACCATCGAACGGTGGCGGATCTCCAATCGCTCCGGCACCTTCTTCCTCCACTGCAGTGATGGCAACCCTTTATGTCACTTTGTCCGCCATTGTTATGAGCTTCTTGTTCTAG ATGGCCGCCGAAGTTGGTTTTGTTCTTGGTTTAATTGCGGTGGTTTTTCTTCAACATGCCGCCGCTCAGACGGTTCATGTTGTCGGAGACTCCACCGGTTGGACGATTCCACAGGAACCCACTTTCTATTCCGATTGGGCTTCTAAAAACAACTTCGTTGTTGGCGATTCTCTAACATTTAACTTCGGGACCTTCACGCACGATGTACTTAAAGTAACAAAAAAGTCGTTTGATACGTGCAATTCCGACGACGGAATCGGCAATGCCCTCACAACGGGTCCTGCAACAGTGAAGCTCGACACCGCCGGCGTACATTACTTCATCTGTACCGTCGGTAAACACTGTCAGGGAGGCCAAAAGTTATCCGTCACCGTCTCCGCCACGTCCGGTGGTGCATTGCCACCTTCTTCGAACACTCCTCATCCACCGGCAAAAACTTCTCCGACTGCGACAACTCCTGCTCAAGACGATGCCTATCCTCCAACTGCAAATTCACCATCTTCGTCACCATCGAACGGTGGCGGATCTCCAATCGCTCCGGCACCTTCTTCCTCCACTGCAGTGATGGCAACCCTTTATGTCACTTTGTCCGCCATTGTTATGAGCTTCTTGTTCTAG ATGGCCGCCGAAGTTGGTTTTGTTCTTGGTTTAATTGCGGTGGTTTTTCTTCAACATGCCGCCGCTCAGACGGTTCATGTTGTCGGAGACTCCACCGGTTGGACGATTCCACAGGAACCCACTTTCTATTCCGATTGGGCTTCTAAAAACAACTTCGTTGTTGGCGATTCTCTAACATTTAACTTCGGGACCTTCACGCACGATGTACTTAAAGTAACAAAAAAGTCGTTTGATACGTGCAATTCCGACGACGGAATCGGCAATGCCCTCACAACGGGTCCTGCAACAGTGAAGCTCGACACCGCCGGCGTACATTACTTCATCTGTACCGTCGGTAAACACTGTCAGGGAGGCCAAAAGTTATCCGTCACCGTCTCCGCCACGTCCGGTGGTGCATTGCCACCTTCTTCGAACACTCCTCATCCACCGGCAAAAACTTCTCCGACTGCGACAACTCCTGCTCAAGACGATGCCTATCCTCCAACTGCAAATTCACCATCTTCGTCACCATCGAACGGTGGCGGATCTCCAATCGCTCCGGCACCTTCTTCCTCCACTGCAGTGATGGCAACCCTTTATGTCACTTTGTCCGCCATTGTTATGAGCTTCTTGTTCTAG MAAEVGFVLGLIAVVFLQHAAAQTVHVVGDSTGWTIPQEPTFYSDWASKNNFVVGDSLTFNFGTFTHDVLKVTKKSFDTCNSDDGIGNALTTGPATVKLDTAGVHYFICTVGKHCQGGQKLSVTVSATSGGALPPSSNTPHPPAKTSPTATTPAQDDAYPPTANSPSSSPSNGGGSPIAPAPSSSTAVMATLYVTLSAIVMSFLF Homology
BLAST of Tan0000398 vs. ExPASy Swiss-Prot
Match: P29602 (Cucumber peeling cupredoxin OS=Cucumis sativus OX=3659 PE=1 SV=3) HSP 1 Score: 117.5 bits (293), Expect = 1.8e-25 Identity = 65/147 (44.22%), Postives = 85/147 (57.82%), Query Frame = 0
BLAST of Tan0000398 vs. ExPASy Swiss-Prot
Match: Q07488 (Blue copper protein OS=Arabidopsis thaliana OX=3702 GN=BCB PE=2 SV=2) HSP 1 Score: 107.5 bits (267), Expect = 1.9e-22 Identity = 70/178 (39.33%), Postives = 96/178 (53.93%), Query Frame = 0
BLAST of Tan0000398 vs. ExPASy Swiss-Prot
Match: P42849 (Umecyanin OS=Armoracia rusticana OX=3704 PE=1 SV=1) HSP 1 Score: 99.0 bits (245), Expect = 6.7e-20 Identity = 50/110 (45.45%), Postives = 63/110 (57.27%), Query Frame = 0
BLAST of Tan0000398 vs. ExPASy Swiss-Prot
Match: Q41001 (Blue copper protein OS=Pisum sativum OX=3888 PE=2 SV=1) HSP 1 Score: 98.2 bits (243), Expect = 1.1e-19 Identity = 66/163 (40.49%), Postives = 91/163 (55.83%), Query Frame = 0
BLAST of Tan0000398 vs. ExPASy Swiss-Prot
Match: P80728 (Mavicyanin OS=Cucurbita pepo OX=3663 PE=1 SV=1) HSP 1 Score: 92.4 bits (228), Expect = 6.2e-18 Identity = 49/109 (44.95%), Postives = 64/109 (58.72%), Query Frame = 0
BLAST of Tan0000398 vs. NCBI nr
Match: XP_038899418.1 (cucumber peeling cupredoxin-like [Benincasa hispida]) HSP 1 Score: 259.2 bits (661), Expect = 2.9e-65 Identity = 146/208 (70.19%), Postives = 166/208 (79.81%), Query Frame = 0
BLAST of Tan0000398 vs. NCBI nr
Match: XP_038899977.1 (cucumber peeling cupredoxin-like [Benincasa hispida]) HSP 1 Score: 253.1 bits (645), Expect = 2.1e-63 Identity = 145/207 (70.05%), Postives = 158/207 (76.33%), Query Frame = 0
BLAST of Tan0000398 vs. NCBI nr
Match: XP_004136088.1 (cucumber peeling cupredoxin-like [Cucumis sativus] >KGN45266.1 hypothetical protein Csa_016411 [Cucumis sativus]) HSP 1 Score: 251.5 bits (641), Expect = 6.1e-63 Identity = 143/206 (69.42%), Postives = 157/206 (76.21%), Query Frame = 0
BLAST of Tan0000398 vs. NCBI nr
Match: XP_022151423.1 (cucumber peeling cupredoxin-like [Momordica charantia]) HSP 1 Score: 250.4 bits (638), Expect = 1.4e-62 Identity = 139/200 (69.50%), Postives = 160/200 (80.00%), Query Frame = 0
BLAST of Tan0000398 vs. NCBI nr
Match: XP_038899950.1 (cucumber peeling cupredoxin-like [Benincasa hispida]) HSP 1 Score: 245.4 bits (625), Expect = 4.4e-61 Identity = 138/202 (68.32%), Postives = 152/202 (75.25%), Query Frame = 0
BLAST of Tan0000398 vs. ExPASy TrEMBL
Match: A0A0A0KBU0 (Phytocyanin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G432480 PE=4 SV=1) HSP 1 Score: 251.5 bits (641), Expect = 3.0e-63 Identity = 143/206 (69.42%), Postives = 157/206 (76.21%), Query Frame = 0
BLAST of Tan0000398 vs. ExPASy TrEMBL
Match: A0A6J1DC50 (cucumber peeling cupredoxin-like OS=Momordica charantia OX=3673 GN=LOC111019357 PE=4 SV=1) HSP 1 Score: 250.4 bits (638), Expect = 6.6e-63 Identity = 139/200 (69.50%), Postives = 160/200 (80.00%), Query Frame = 0
BLAST of Tan0000398 vs. ExPASy TrEMBL
Match: A0A0A0K6Y7 (Phytocyanin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G432500 PE=4 SV=1) HSP 1 Score: 242.3 bits (617), Expect = 1.8e-60 Identity = 137/208 (65.87%), Postives = 155/208 (74.52%), Query Frame = 0
BLAST of Tan0000398 vs. ExPASy TrEMBL
Match: A0A5A7UZ38 (Cucumber peeling cupredoxin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold339G002230 PE=4 SV=1) HSP 1 Score: 239.6 bits (610), Expect = 1.2e-59 Identity = 139/215 (64.65%), Postives = 164/215 (76.28%), Query Frame = 0
BLAST of Tan0000398 vs. ExPASy TrEMBL
Match: A0A1S3CDZ6 (cucumber peeling cupredoxin-like OS=Cucumis melo OX=3656 GN=LOC103499801 PE=4 SV=1) HSP 1 Score: 239.6 bits (610), Expect = 1.2e-59 Identity = 139/215 (64.65%), Postives = 164/215 (76.28%), Query Frame = 0
BLAST of Tan0000398 vs. TAIR 10
Match: AT5G20230.1 (blue-copper-binding protein ) HSP 1 Score: 107.5 bits (267), Expect = 1.3e-23 Identity = 70/178 (39.33%), Postives = 96/178 (53.93%), Query Frame = 0
BLAST of Tan0000398 vs. TAIR 10
Match: AT5G26330.1 (Cupredoxin superfamily protein ) HSP 1 Score: 76.3 bits (186), Expect = 3.3e-14 Identity = 55/167 (32.93%), Postives = 86/167 (51.50%), Query Frame = 0
BLAST of Tan0000398 vs. TAIR 10
Match: AT2G23990.1 (early nodulin-like protein 11 ) HSP 1 Score: 74.3 bits (181), Expect = 1.3e-13 Identity = 64/185 (34.59%), Postives = 96/185 (51.89%), Query Frame = 0
BLAST of Tan0000398 vs. TAIR 10
Match: AT3G20570.1 (early nodulin-like protein 9 ) HSP 1 Score: 73.9 bits (180), Expect = 1.6e-13 Identity = 63/197 (31.98%), Postives = 100/197 (50.76%), Query Frame = 0
BLAST of Tan0000398 vs. TAIR 10
Match: AT2G26720.1 (Cupredoxin superfamily protein ) HSP 1 Score: 71.6 bits (174), Expect = 8.1e-13 Identity = 62/188 (32.98%), Postives = 85/188 (45.21%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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