Spg028850.1 (mRNA) Sponge gourd (cylindrica) v1

Overview


Name	Spg028850.1
Type	mRNA
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	CCHC-type domain-containing protein
Location	scaffold7: 14236345 .. 14242262 (+)
Sequence length	1212
RNA-Seq Expression	Spg028850.1
Synteny	Spg028850.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCAGGATGGCCGAGTGGTCTAAGGCGCCAGACTCAAGTTCTGGTCTTCGTGAGAGGGCGTGGGTTCAAATCCCACTTCTGACAAAATCAATTGATCAATAAACACTAGTTTAAAAGATTGTAATATGCTAAAATAATTTTTCTTCGTTTTTTAACTTTTTTTTCAATGCTAGAATAATCATTTCACTCGAATCAATCAATAAGCAATAATTGGTTCTCCGTTTTCTCTCTAAGATAACGGTGGAAGAAGGGCGGCCAGGGTGCCAGATTGGAGCAGTCAGATCTGCGTAGAGGTGGTGTTCCTGAGGCGGTGGTCTTCGGCTATTATTGTCATGGAAGGACAGAAGGATGAAGAAACGTTGGTCAAACAACTCACAGAGCTGAAGGTTACTGAAGAAGAAAGAGCTAGTGTTTTCAAATTGAAAGATGAGGAAATTGATAGATCGGAGAAGAAGTTGGAGAATGCGTTGGTGTGCAAAATCCTTTCTCAGAAGCAAATTAATCCCAACATGTTCAAATCCAAGATGCCCCGAATATGGAACCAAGAACATACTACTATCAGTAAAGTGGGATTCAACTTGTTTCTGTGCAAGTTCAAGAACGGACGAATAAAAAGTCTAATTGAGGACAATGGCCCTTGGTTTTTTGACAAAGCATTGTTACTGTTCAAGGAGCCAAGGGGGGGCAACTACGGGGAAGATATTGAGTTCAGGTATGTGTCCTTTTGGATTCATTTTTATAAACTCCCATTTGCGTGTTTTTCCAGGAAAGTGGCAACGGAAATAGGGAGCATACTTGGACAGGTAAATCAGATTGATCTAGAGGAGGAGTTAGATCATTGTCGCGGTGGTTCGTTGAGAGTGAAAATACAAATAGATGCTACCAAGCCTTTGAAGAGGGGAATTTACTTATCTTCGGAGGATTCAAATGATGATCGATGGATTCCAATTACATATGAAAAGTTGTCGAATTTTTGTTATGGGTGTGGTATGTTGGGGCACATATTAAAGGAGTGCGAGTGTTCTAACTATGATGGTCTACCCGTGGAGGATCTTCCATATGAAGCATGGATCGAACCGGTTCTGTTGAAACCAAAAGAGTATGATTTTTTTTCCTAGGTCCATAGTTAATCAGGCTGGTCGTGGAAAAGGTCGAGGATGGGACGGCGGAAGAGGAGGGTGGAGAGGGATGCAACAAACAGACGAGGAGTCTGAGTTCGAGAAAAGAGAGAAGCTACCGGTCAAAAAAGGGAAAGAATTTGAAGAAGTGGTGGGGCGGGGCCAACCATCCAAAAATGGGTCTTCCCCGATGAACATAACGGCAACGAACATTCCAACAGAGGCAACACCGTCGATGGCTCCAATGGTCAAAATTACAGAAATGGAAACATTGGACAAAGAAACGGAGTCAAGGGGGGCGAAAATTAAGGAAGGAGAAATAAGTATGGCATTAAATGAGGATAATATCACAAAAGGAAATACTTGTATAAAGAATTCGGCTAGTGAATCTGGGAATAACGACCCAATTGAAAAGGAAAGTTATTGCTCAATTATGGAGGTTGATTTAGATGAGATTGGGTCAAAAGAGGAGAGTGGGTCAAAAGATGAGGAAAGGGTCAGTTCTATGGAGTCAACTTTTGCTTCTATTACAGGTCATTCACATGATCCCAAAGGAAAAGGAACTCTGCTGGACAACCCTCGTAACAGCCGAGAGGGTCAGGGTAAAACTAAAGGTTGGAAACGTATCCCTCGTAATAAAATGGAAAGTGAACAATCAATGGAAAATTTGTGTAAGCCTACAATCGGAGTCAAACACGCTATTAGTTTTGATGAGGCAGATGAAGAATTATGCAAAAAGAGGTTGATGGTTTTGGATCCGGAAAAAAATGCAAAATCGGTGGAGGTTGCGGGACAGCCCCGCCGAGCACAATGAAAACCTTAAGTTGGAATGTCCAGGGGCTGGGGAACCCCCGGACATTAAGAGCGCTGCGACACATCATTCGCAGCCACCAACCCCAATTGGTTTTCTTAATGGAAACCCGTCGTCAGGATAAAAGAGGAGATAGATATAAGAATGAGTTACAGTTTGATTGTTGTTTGCCAGTTCCGAGTAATGTTCAGAGTGGTGGCCTTCTGCTGATGTGGAAAAATGAGATTGATGTGACGATTCATCAGGACACATTGATGCTCTTGTGAAGTATAATAACTTCATGTGGAGATTCACGGGGATCTATGACAATCCTAGGAGAGAGCTTCATAAAGAAACATGGAATCTTATGAAGCGTCTGAGAGATGATAGTGATGTGTCGTGGGTGTTAGAGGGCGATTTCAATGAAATTCTCAGTAGCGAAGAGAAGCAGGGAGGGGTACCTCGTCAGGAAAATGTTATGCAAGCGTTTCGAGATGTGATTGATTTGTGAGGCCTTCTTAACCCAGGCTTTATTGGTCCTGATTTCACATGGCGTAATAACCATTTCCAGGCGATCTTATTTGGGAGAGAATTGACCGTTTTCTTCTGAATGTTCATATGCATAATAGATGCAGTTTCTTTAATGTTTCTCACTTGCCTCGCATAGCCTCTGATCATAGACCATTACTTGTTGAATAGTCCATTAAGCCCCTGAATCAAAGTTTTGTTTCTCCCAAGAGGCCTCGGAGATTTGAGGAAGAGTGGTGTAAGTATGAGGACTGTAGAGCTATTGTGGAGGAAGTTTGGAATTCTCAAGGTTGTCATGATATTATGGAATATTCTAATAAAACTATGAATTGTCTTATGAGTCTGTGCAACTGGAGCCGTCGTAAATATGGTGGATCGATTAGAGGAGCGATTTCGAAAATAGAAAGAGAGATTCAGAATCTTTCAAATAAGGATGGAAAATTCAATAGGGCTGTTTTGAGGGAAATGAAGGAAACTCTATAAAGCCTTCTAGAAGATGATGAGATCTACTGGAAGTAGAGATCTCGTGAAGAATGGTTGCTTTGGGGAGACAGAAACACCAAATGGTTTCATATGAGAGCCAATACGAGAAGGAAAAGGAATCGTATCAGGGGTCTTATGGACGACCTAGGAATCTGAACTGAAGAAGATAACAGAATGGAGTGTATTGTGAATAGCTATTTCTCTAAGATCTTCCAATCTTCGGAACCTCAGATGGAATCCATCGATCATATATTAGAAACCATTCCCACGTCCATCTCAGATGAGCAGAATGATGTTCTAGTTCAAAAATTTTCGAAGGAAGAGATTTGGGGGGTTCTTAAGAGTATGCATCCAATAAAAGCTCCTGGCCCAGATGGTCTTCAGGCGATCTTTTATCAGAAATTTTGGGATATTGTTGGGGAAGATACATGCAAGATCTGTCTGCAGTACCTTAATGGAGAGTTATCCTTAAAAGAAATTAATAAGACTCTCATTGCTCTTATCCCGAAGGTAAAGGATCCCAAAATGATGAAAGATTATCGTCCAATCAGTTTGTGTAATGTGATTTACAAAATCATTGCTAAAGTAATTGCCAACAGATTGAAACGTGTATTGGACATGGTCATATCTCCTACCCAATCTACTTTCGTGCCAGGTAGATTGATTACTGATAATGCCATCATTGGATTCGAATGTATTCATGCAGTGAAGAAAAGAAGATCTGGGAAGGACGGGGTTGTGGCCTTGAAACTCGATATGAGTAAGGCGTATGATCGTGTGGAATGGATATACATTCGGAGCATTTTGGGGAAAATGGGCTTTAACAGTAGATGGGTAGATCTAGTCATGAGATGCGTGGAGTCGGTTGCATTCCAGGTGTTGTTAAGTGGAACCCCGAGGAAGGAATTTGTTCCAAAACGGGGCCTTCGACAGGACGATCTCTCTCCCCGTATCTTTTCCTTATCTGCATTGAGGGGTTATCGGGGCTTTTAAATAGAGCTGATGTTACTAGGAAGGTGACAAGTTTGCAGATAAATAAGTATTGCCCTTCTCTTACTCAAAATTTTTATGCTGATGATAGTTTGTTATTTTTCCAAGCTACTAACACAGATTGCAGGCTATAAGAGATATCCTAAATACGTACGAGAAAGCTTCTGGACAAATAATTAACTATGAGAAATCAACCTTCATGGTGAGCCCTAATATAAAGGAGGTGATGATTCGTGCTATTCATGAGGAGCTGAAGGTCCAACACACAAAGAATTTAGGGCAATATCTTGGACTACCATCCCAGAACGCCAAGAATAAAAAGGAGATTTTCAGTAGCATCAAGGATCGAGTTTGGAGAGCTCTTCAAGGATGGAAAGGGAAGTTTTTCTCATCTGATGGGAAAAAATTGCTTATAAAGTCCATAGCGCAAGCTATTCCTAATTATGCTATGAGTTGTTTTAAATTTCCGTTTTCCCTGTGTAATGATTTGAATGCTCTTTGTGCTAGGTTCTGGTGGGGATCTACGGATTCAGAAAGGAAAATCCATTGGCGAAGCTGGAAGAAACTTTGTGTTTATAAAACGTGTGGTGGTCTAGGCTTCAAAGATTTATCTCTGTTCAATCATGTTATGCTGGCCAAACAAAGTTGGAGGCTGATTAGATATCCCAATAGTCTCTTAACCAAAGTTCTTAGGGGTCGGTACTTTAAAACAAGTCATTTTCTCAAAGCACCTCTAGGGTCCAATCTTTCCTACACGTGAAGGAGCATCCTTTGGGGGAGAGAGCTTTTCAAAGAAGGATATCGTTGGAAAGTTGGAGATGGTTTTAGTATTGACATTTCTAATGATCCTTGGATTCGTAAAGAGGGGATGGCCAAACCAATTTTCACCCATCCTAATATTAGACATTTTACTGTGGTTCAGCTTAAAAGCTCTAATGGCATGTGGAACGAACCTTTGGTTCGGGCTTCCTTTTTGGAAGTAGACGCTTCAGCCATTTTAGCTACTCCTACTAAGTCTAATATGGGGGAGGAATAAATTATTTGGAATCTTGACCCAAAAGGAAGATTCTCTGTGAAGAGTGCTTATCGCTTGGGATGTCAGATGAGCCAAAGATTCCAAGCTTCTTCATCTAATTCCAAGGAACGGGAATCTAGATAGAAGGTTTTTTGGAAGCTCAAACTACCCCCTAAGATTAAAATTTGCGGGTGGAAGCTCTATAATGACATATTACCAACTCTGTCCAACCTTAATAAAAGAGGGTTGGATGTGTGGCCTATATGTTTCCTTTGCAGGGAGAAAGTAGAGACAACTTCCCACCTCTTTTGGCATTGTAAGGTGACTAAAGGATTATGGGTTAGATATTTTCCTCTTGCTAGCTTGGATTGTTTTTTTTTTTTTTTTTTTTTTTTGCCAGGGAAGAATGGCCGATCTCTATGATTTTAGAGGGATTATGGCAGAGTATTGGGAATGCAAGGGAGATTGGTCATCAGATAAAATGCAGTAGTCTTATCATATGTTGGAAAATATGGTTTGTTCGTAATTCTATCAGTCACAATAATCAGAGACCAACATAAAGTGATATCAGAGACAATCTTCAACATCAGATCAGCAAATCAATTCAAGAGCTACTGGGAGAGGAAGAGTCTTACCGGACAAGTTGTCTCCAACCGTCTGTTCCAGATCGAAGCGAAGGCGATTTTCCAGATGTACCAGAAGAGGGCGGAAGCGACGACGACTCATTAGTTGATTCGACCGTGCAGAAGAAATGGATCCCCATCCTCGATGGCTGTTGGAAGCTAAGTTGTGATGCTTCTTGGAACACAGATCGCAAATGTGGTGGCGTGGGATGGGCTCTTCGCGACTGGAAAGGAGCTCTTGTAGCGGCGGATCTCATACGAGTTCATTTGGCGTGGGATATCAGTTGGCTCGAGGCTCTTGCAATTTCTGAAGGTCATTGGGAGATTCCCTCCAGTCACAATGGGAGTGAGACTTTTCGTGGAAAGTGA

mRNA sequence

ATGTCAGGATGGCCGAGTGGTCTAAGGCGCCAGACTCAAGTTCTGGTCTTCGTGAGAGGGCATAACGGTGGAAGAAGGGCGGCCAGGGTGCCAGATTGGAGCAGTCAGATCTGCGTAGAGGTGGTGTTCCTGAGGCGGTGGTCTTCGGCTATTATTGTCATGGAAGGACAGAAGGATGAAGAAACGTTGGTCAAACAACTCACAGAGCTGAAGGTTACTGAAGAAGAAAGAGCTAGTGTTTTCAAATTGAAAGATGAGGAAATTGATAGATCGGAGAAGAAGTTGGAGAATGCGTTGGTGTGCAAAATCCTTTCTCAGAAGCAAATTAATCCCAACATGTTCAAATCCAAGATGCCCCGAATATGGAACCAAGAACATACTACTATCAGTAAAGTGGGATTCAACTTGTTTCTGTGCAAGTTCAAGAACGGACGAATAAAAAGTCTAATTGAGGACAATGGCCCTTGGTTTTTTGACAAAGCATTGTTACTGTTCAAGGAGCCAAGGGGGGGCAACTACGGGGAAGATATTGAGTTCAGGTCCATAGTTAATCAGGCTGGTCGTGGAAAAGGTCGAGGATGGGACGGCGGAAGAGGAGGGTGGAGAGGGATGCAACAAACAGACGAGGAGTCTGAGTTCGAGAAAAGAGAGAAGCTACCGGTCAAAAAAGGGAAAGAATTTGAAGAAGTGGTGGGGCGGGGCCAACCATCCAAAAATGGGTCTTCCCCGATGAACATAACGGCAACGAACATTCCAACAGAGGCAACACCGTCGATGGCTCCAATGGTCAAAATTACAGAAATGGAAACATTGGACAAAGAAACGGAGTCAAGGGGGGCGAAAATTAAGGAAGGAGAAATAAGTATGGCATTAAATGAGGATAATATCACAAAAGGAAATACTTGTATAAAGAATTCGGCTAGTGAATCTGGGAATAACGACCCAATTGAAAAGGAAAGTTATTGCTCAATTATGGAGGTTGATTTAGATGAGATTGGGTCAAAAGAGGAGAGTGGGTCAAAAGATGAGGAAAGGGTCAGTTCTATGGAGTCAACTTTTGCTTCTATTACAGGTCATTCACATGATCCCAAAGGAAAAGGAACTCTGCTGGACAACCCTCGTAACAGCCGAGAGGGTCAGGGTAAAACTAAAGGTTGGAAACGTATCCCTCGTAATAAAATGGAAAGTGAACAATCAATGGAAAATTTGTGA

Coding sequence (CDS)

ATGTCAGGATGGCCGAGTGGTCTAAGGCGCCAGACTCAAGTTCTGGTCTTCGTGAGAGGGCATAACGGTGGAAGAAGGGCGGCCAGGGTGCCAGATTGGAGCAGTCAGATCTGCGTAGAGGTGGTGTTCCTGAGGCGGTGGTCTTCGGCTATTATTGTCATGGAAGGACAGAAGGATGAAGAAACGTTGGTCAAACAACTCACAGAGCTGAAGGTTACTGAAGAAGAAAGAGCTAGTGTTTTCAAATTGAAAGATGAGGAAATTGATAGATCGGAGAAGAAGTTGGAGAATGCGTTGGTGTGCAAAATCCTTTCTCAGAAGCAAATTAATCCCAACATGTTCAAATCCAAGATGCCCCGAATATGGAACCAAGAACATACTACTATCAGTAAAGTGGGATTCAACTTGTTTCTGTGCAAGTTCAAGAACGGACGAATAAAAAGTCTAATTGAGGACAATGGCCCTTGGTTTTTTGACAAAGCATTGTTACTGTTCAAGGAGCCAAGGGGGGGCAACTACGGGGAAGATATTGAGTTCAGGTCCATAGTTAATCAGGCTGGTCGTGGAAAAGGTCGAGGATGGGACGGCGGAAGAGGAGGGTGGAGAGGGATGCAACAAACAGACGAGGAGTCTGAGTTCGAGAAAAGAGAGAAGCTACCGGTCAAAAAAGGGAAAGAATTTGAAGAAGTGGTGGGGCGGGGCCAACCATCCAAAAATGGGTCTTCCCCGATGAACATAACGGCAACGAACATTCCAACAGAGGCAACACCGTCGATGGCTCCAATGGTCAAAATTACAGAAATGGAAACATTGGACAAAGAAACGGAGTCAAGGGGGGCGAAAATTAAGGAAGGAGAAATAAGTATGGCATTAAATGAGGATAATATCACAAAAGGAAATACTTGTATAAAGAATTCGGCTAGTGAATCTGGGAATAACGACCCAATTGAAAAGGAAAGTTATTGCTCAATTATGGAGGTTGATTTAGATGAGATTGGGTCAAAAGAGGAGAGTGGGTCAAAAGATGAGGAAAGGGTCAGTTCTATGGAGTCAACTTTTGCTTCTATTACAGGTCATTCACATGATCCCAAAGGAAAAGGAACTCTGCTGGACAACCCTCGTAACAGCCGAGAGGGTCAGGGTAAAACTAAAGGTTGGAAACGTATCCCTCGTAATAAAATGGAAAGTGAACAATCAATGGAAAATTTGTGA

Protein sequence

MSGWPSGLRRQTQVLVFVRGHNGGRRAARVPDWSSQICVEVVFLRRWSSAIIVMEGQKDEETLVKQLTELKVTEEERASVFKLKDEEIDRSEKKLENALVCKILSQKQINPNMFKSKMPRIWNQEHTTISKVGFNLFLCKFKNGRIKSLIEDNGPWFFDKALLLFKEPRGGNYGEDIEFRSIVNQAGRGKGRGWDGGRGGWRGMQQTDEESEFEKREKLPVKKGKEFEEVVGRGQPSKNGSSPMNITATNIPTEATPSMAPMVKITEMETLDKETESRGAKIKEGEISMALNEDNITKGNTCIKNSASESGNNDPIEKESYCSIMEVDLDEIGSKEESGSKDEERVSSMESTFASITGHSHDPKGKGTLLDNPRNSREGQGKTKGWKRIPRNKMESEQSMENL

Homology

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BLAST of Spg028850.1 vs. NCBI nr
Match: XP_022143536.1 (uncharacterized protein LOC111013413 [Momordica charantia])

HSP 1 Score: 105.5 bits (262), Expect = 1.1e-18
Identity = 52/120 (43.33%), Postives = 81/120 (67.50%), Query Frame = 0


Query: 60  EETLVKQLTELKVTEEERASVFKLKDEEIDRSEKKLENALVCKILSQKQINPNMFKSKMP 119
           +E L +Q+  LK+T+EE+  +F + ++EI+  +K+ + +LVCK+L+ K I   +FK+ MP
Sbjct: 3   DELLSRQVERLKLTKEEKGEIFDMGEDEIEDYDKQAQFSLVCKLLTWKNIPGEVFKNMMP 62

Query: 120 RIWNQEHTTISKVGFNLFLCKFKNGRIKSLIEDNGPWFFDKALLLFKEPRGGNYGEDIEF 179
           RIW   +  I  VG NLFLCKFK  R KS I +NGP FFDK++++ +EPR      ++E+
Sbjct: 63  RIWVNVNVKIESVGKNLFLCKFKTVRDKSKILNNGPSFFDKSMVMLEEPRANCNFNELEY 122

[Close]

BLAST of Spg028850.1 vs. NCBI nr
Match: XP_022154991.1 (uncharacterized protein LOC111022134 isoform X2 [Momordica charantia])

HSP 1 Score: 104.8 bits (260), Expect = 1.8e-18
Identity = 56/130 (43.08%), Postives = 84/130 (64.62%), Query Frame = 0


Query: 61  ETLVKQLTE-LKVTEEER--------ASVFKLKDEEIDRSEKKLENALVCKILSQKQINP 120
           + L+ QL E LK+T+EE+          +F + ++EI+  +K+ + +LVCK+L+ K I  
Sbjct: 3   DELLSQLVERLKLTKEEKGEIFDMGEGEIFDMGEDEIEDYDKQAQFSLVCKLLTLKNIPG 62

Query: 121 NMFKSKMPRIWNQEHTTISKVGFNLFLCKFKNGRIKSLIEDNGPWFFDKALLLFKEPRGG 180
            +FK+ MPRIW   +  I  VG NLFLCKFK  R KS I +NGPWFFDK++++ +EPR  
Sbjct: 63  EVFKNMMPRIWANVNVKIESVGKNLFLCKFKTVRDKSKILNNGPWFFDKSMVMLEEPRAN 122

Query: 181 NYGEDIEFRS 182
               ++EFR+
Sbjct: 123 CNFNELEFRT 132

[Close]

BLAST of Spg028850.1 vs. NCBI nr
Match: XP_022154990.1 (uncharacterized protein LOC111022134 isoform X1 [Momordica charantia])

HSP 1 Score: 104.4 bits (259), Expect = 2.4e-18
Identity = 56/129 (43.41%), Postives = 83/129 (64.34%), Query Frame = 0


Query: 61  ETLVKQLTE-LKVTEEER--------ASVFKLKDEEIDRSEKKLENALVCKILSQKQINP 120
           + L+ QL E LK+T+EE+          +F + ++EI+  +K+ + +LVCK+L+ K I  
Sbjct: 3   DELLSQLVERLKLTKEEKGEIFDMGEGEIFDMGEDEIEDYDKQAQFSLVCKLLTLKNIPG 62

Query: 121 NMFKSKMPRIWNQEHTTISKVGFNLFLCKFKNGRIKSLIEDNGPWFFDKALLLFKEPRGG 180
            +FK+ MPRIW   +  I  VG NLFLCKFK  R KS I +NGPWFFDK++++ +EPR  
Sbjct: 63  EVFKNMMPRIWANVNVKIESVGKNLFLCKFKTVRDKSKILNNGPWFFDKSMVMLEEPRAN 122

[Close]

BLAST of Spg028850.1 vs. NCBI nr
Match: XP_035546596.1 (uncharacterized protein LOC118348645 [Juglans regia])

HSP 1 Score: 70.1 bits (170), Expect = 5.0e-08
Identity = 41/121 (33.88%), Postives = 66/121 (54.55%), Query Frame = 0


Query: 60  EETLVKQLTELKVTEEERASVFKLKDEEIDRSEKKLENALVCKILSQKQINPNMFKSKMP 119
           EE +      LK+TEEE+   + LK+EEI  S     + LV  + + +++N   FK+ M 
Sbjct: 2   EEEISHHCKSLKLTEEEQQEYY-LKEEEITFSHDISNSCLVALVAADREVNKGAFKATMT 61

Query: 120 RIWNQE-HTTISKVGFNLFLCKFKNGRIKSLIEDNGPWFFDKALLLFKEPRGGNYGEDIE 179
           R+WN E   T   +G N FL +F N  +++ +    PW FD+ L+  +E +G    +DI+
Sbjct: 62  RLWNGEGGITFKDLGRNKFLLEFHNSTVRTRVLTGRPWSFDRNLICIQECKGRLALKDID 121

[Close]

BLAST of Spg028850.1 vs. NCBI nr
Match: XP_021758384.1 (uncharacterized protein LOC110723340 [Chenopodium quinoa])

HSP 1 Score: 68.9 bits (167), Expect = 1.1e-07
Identity = 43/124 (34.68%), Postives = 67/124 (54.03%), Query Frame = 0


Query: 61  ETLVKQLTELKVTEEERASVFKLKDEEI-DRSEKKLENALVCKILSQKQINPNMFKSKMP 120
           + ++K+  +LK+T++E   V    + E  D S  +L  ALV ++ + K  N +  K  + 
Sbjct: 2   QDMIKEWEKLKLTDDENLVVMGNSNAETEDNSNNQLRLALVGRLCTVKPFNVDAMKKTLT 61

Query: 121 RIWNQE-HTTISKVGFNLFLCKFKNGRIKSLIEDNGPWFFDKALLLFKEPRGGNYGEDIE 180
            +W  + +  I  +  NLF+ +F N   KS I +  PWFFD  LLLFKE +GG     IE
Sbjct: 62  NVWRLKCNIAIRTMDTNLFVFQFFNEADKSRILEGMPWFFDGKLLLFKEIQGGEQPSKIE 121

Query: 181 FRSI 183
           F+ I
Sbjct: 122 FKKI 125

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BLAST of Spg028850.1 vs. ExPASy TrEMBL
Match: A0A6J1CQJ5 (uncharacterized protein LOC111013413 OS=Momordica charantia OX=3673 GN=LOC111013413 PE=4 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 5.2e-19
Identity = 52/120 (43.33%), Postives = 81/120 (67.50%), Query Frame = 0


Query: 60  EETLVKQLTELKVTEEERASVFKLKDEEIDRSEKKLENALVCKILSQKQINPNMFKSKMP 119
           +E L +Q+  LK+T+EE+  +F + ++EI+  +K+ + +LVCK+L+ K I   +FK+ MP
Sbjct: 3   DELLSRQVERLKLTKEEKGEIFDMGEDEIEDYDKQAQFSLVCKLLTWKNIPGEVFKNMMP 62

Query: 120 RIWNQEHTTISKVGFNLFLCKFKNGRIKSLIEDNGPWFFDKALLLFKEPRGGNYGEDIEF 179
           RIW   +  I  VG NLFLCKFK  R KS I +NGP FFDK++++ +EPR      ++E+
Sbjct: 63  RIWVNVNVKIESVGKNLFLCKFKTVRDKSKILNNGPSFFDKSMVMLEEPRANCNFNELEY 122

[Close]

BLAST of Spg028850.1 vs. ExPASy TrEMBL
Match: A0A6J1DQC9 (uncharacterized protein LOC111022134 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111022134 PE=4 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 8.8e-19
Identity = 56/130 (43.08%), Postives = 84/130 (64.62%), Query Frame = 0


Query: 61  ETLVKQLTE-LKVTEEER--------ASVFKLKDEEIDRSEKKLENALVCKILSQKQINP 120
           + L+ QL E LK+T+EE+          +F + ++EI+  +K+ + +LVCK+L+ K I  
Sbjct: 3   DELLSQLVERLKLTKEEKGEIFDMGEGEIFDMGEDEIEDYDKQAQFSLVCKLLTLKNIPG 62

Query: 121 NMFKSKMPRIWNQEHTTISKVGFNLFLCKFKNGRIKSLIEDNGPWFFDKALLLFKEPRGG 180
            +FK+ MPRIW   +  I  VG NLFLCKFK  R KS I +NGPWFFDK++++ +EPR  
Sbjct: 63  EVFKNMMPRIWANVNVKIESVGKNLFLCKFKTVRDKSKILNNGPWFFDKSMVMLEEPRAN 122

Query: 181 NYGEDIEFRS 182
               ++EFR+
Sbjct: 123 CNFNELEFRT 132

[Close]

BLAST of Spg028850.1 vs. ExPASy TrEMBL
Match: A0A6J1DL64 (uncharacterized protein LOC111022134 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111022134 PE=4 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 1.2e-18
Identity = 56/129 (43.41%), Postives = 83/129 (64.34%), Query Frame = 0


Query: 61  ETLVKQLTE-LKVTEEER--------ASVFKLKDEEIDRSEKKLENALVCKILSQKQINP 120
           + L+ QL E LK+T+EE+          +F + ++EI+  +K+ + +LVCK+L+ K I  
Sbjct: 3   DELLSQLVERLKLTKEEKGEIFDMGEGEIFDMGEDEIEDYDKQAQFSLVCKLLTLKNIPG 62

Query: 121 NMFKSKMPRIWNQEHTTISKVGFNLFLCKFKNGRIKSLIEDNGPWFFDKALLLFKEPRGG 180
            +FK+ MPRIW   +  I  VG NLFLCKFK  R KS I +NGPWFFDK++++ +EPR  
Sbjct: 63  EVFKNMMPRIWANVNVKIESVGKNLFLCKFKTVRDKSKILNNGPWFFDKSMVMLEEPRAN 122

[Close]

BLAST of Spg028850.1 vs. ExPASy TrEMBL
Match: A0A6P9EGW2 (uncharacterized protein LOC118348645 OS=Juglans regia OX=51240 GN=LOC118348645 PE=4 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 2.4e-08
Identity = 41/121 (33.88%), Postives = 66/121 (54.55%), Query Frame = 0


Query: 60  EETLVKQLTELKVTEEERASVFKLKDEEIDRSEKKLENALVCKILSQKQINPNMFKSKMP 119
           EE +      LK+TEEE+   + LK+EEI  S     + LV  + + +++N   FK+ M 
Sbjct: 2   EEEISHHCKSLKLTEEEQQEYY-LKEEEITFSHDISNSCLVALVAADREVNKGAFKATMT 61

Query: 120 RIWNQE-HTTISKVGFNLFLCKFKNGRIKSLIEDNGPWFFDKALLLFKEPRGGNYGEDIE 179
           R+WN E   T   +G N FL +F N  +++ +    PW FD+ L+  +E +G    +DI+
Sbjct: 62  RLWNGEGGITFKDLGRNKFLLEFHNSTVRTRVLTGRPWSFDRNLICIQECKGRLALKDID 121

[Close]

BLAST of Spg028850.1 vs. ExPASy TrEMBL
Match: A0A5C7IMZ7 (DUF4283 domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_005566 PE=4 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 7.0e-08
Identity = 40/120 (33.33%), Postives = 65/120 (54.17%), Query Frame = 0


Query: 64  VKQLTELKVTEEERASVFKLKDEEIDRSEKKLENALVCKILSQKQINPNMFKSKMPRIW- 123
           V +L E    +E+   + +L++   ++ EK+L   L  K+LS K +N + F + MP+IW 
Sbjct: 7   VAKLCEALTLKEKEGPLMQLQEGMTNKGEKRLALRLAGKLLSSKPVNRDAFMAVMPKIWV 66

Query: 124 NQEHTTISKVGFNLFLCKFKNGRIKSLIEDNGPWFFDKALLLFKEPRGGNYGEDIEFRSI 183
             +   I  +  N F   FKN + +  I + GPW FDKALL+  EP+G    +D+ F  +
Sbjct: 67  TIDGFDIEIIDGNTFSFTFKNEKDQLRILNRGPWSFDKALLVLVEPKGKGDTQDMSFNRV 126

[Close]

BLAST of Spg028850.1 vs. TAIR 10
Match: AT4G25640.2 (detoxifying efflux carrier 35 )

HSP 1 Score: 43.9 bits (102), Expect = 3.6e-04
Identity = 19/19 (100.00%), Postives = 19/19 (100.00%), Query Frame = 0


Query: 2   SGWPSGLRRQTQVLVFVRG 21
           SGWPSGLRRQTQVLVFVRG
Sbjct: 489 SGWPSGLRRQTQVLVFVRG 507

The following BLAST results are available for this feature:

BLAST of Spg028850.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022143536.1	1.1e-18	43.33	uncharacterized protein LOC111013413 [Momordica charantia]	[more]
XP_022154991.1	1.8e-18	43.08	uncharacterized protein LOC111022134 isoform X2 [Momordica charantia]	[more]
XP_022154990.1	2.4e-18	43.41	uncharacterized protein LOC111022134 isoform X1 [Momordica charantia]	[more]
XP_035546596.1	5.0e-08	33.88	uncharacterized protein LOC118348645 [Juglans regia]	[more]
XP_021758384.1	1.1e-07	34.68	uncharacterized protein LOC110723340 [Chenopodium quinoa]	[more]

BLAST of Spg028850.1 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Spg028850.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CQJ5	5.2e-19	43.33	uncharacterized protein LOC111013413 OS=Momordica charantia OX=3673 GN=LOC111013...	[more]
A0A6J1DQC9	8.8e-19	43.08	uncharacterized protein LOC111022134 isoform X2 OS=Momordica charantia OX=3673 G...	[more]
A0A6J1DL64	1.2e-18	43.41	uncharacterized protein LOC111022134 isoform X1 OS=Momordica charantia OX=3673 G...	[more]
A0A6P9EGW2	2.4e-08	33.88	uncharacterized protein LOC118348645 OS=Juglans regia OX=51240 GN=LOC118348645 P...	[more]
A0A5C7IMZ7	7.0e-08	33.33	DUF4283 domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_005566 ...	[more]

BLAST of Spg028850.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G25640.2	3.6e-04	100.00	detoxifying efflux carrier 35	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025558	Domain of unknown function DUF4283	PFAM	PF14111	DUF4283	coord: 88..166 e-value: 4.7E-7 score: 29.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 328..348
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 377..395
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 328..403
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 188..252
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 235..252
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 205..232

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Spg028850	Spg028850	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spg028850.1-cds	Spg028850.1-cds-scaffold7:14236345..14236405	CDS
Spg028850.1-cds	Spg028850.1-cds-scaffold7:14236581..14237058	CDS
Spg028850.1-cds	Spg028850.1-cds-scaffold7:14237465..14238135	CDS
Spg028850.1-cds	Spg028850.1-cds-scaffold7:14238521..14238522	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spg028850.1-three_prime_utr	Spg028850.1-three_prime_utr-scaffold7:14238523..14238761	three_prime_UTR
Spg028850.1-three_prime_utr	Spg028850.1-three_prime_utr-scaffold7:14238993..14239071	three_prime_UTR
Spg028850.1-three_prime_utr	Spg028850.1-three_prime_utr-scaffold7:14240383..14240511	three_prime_UTR
Spg028850.1-three_prime_utr	Spg028850.1-three_prime_utr-scaffold7:14241178..14241197	three_prime_UTR
Spg028850.1-three_prime_utr	Spg028850.1-three_prime_utr-scaffold7:14241549..14241591	three_prime_UTR
Spg028850.1-three_prime_utr	Spg028850.1-three_prime_utr-scaffold7:14241861..14242262	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Spg028850.1	Spg028850.1-protein	polypeptide