Spg028850 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg028850
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionCCHC-type domain-containing protein
Locationscaffold7: 14236345 .. 14242262 (+)
RNA-Seq ExpressionSpg028850
SyntenySpg028850
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCAGGATGGCCGAGTGGTCTAAGGCGCCAGACTCAAGTTCTGGTCTTCGTGAGAGGGCGTGGGTTCAAATCCCACTTCTGACAAAATCAATTGATCAATAAACACTAGTTTAAAAGATTGTAATATGCTAAAATAATTTTTCTTCGTTTTTTAACTTTTTTTTCAATGCTAGAATAATCATTTCACTCGAATCAATCAATAAGCAATAATTGGTTCTCCGTTTTCTCTCTAAGATAACGGTGGAAGAAGGGCGGCCAGGGTGCCAGATTGGAGCAGTCAGATCTGCGTAGAGGTGGTGTTCCTGAGGCGGTGGTCTTCGGCTATTATTGTCATGGAAGGACAGAAGGATGAAGAAACGTTGGTCAAACAACTCACAGAGCTGAAGGTTACTGAAGAAGAAAGAGCTAGTGTTTTCAAATTGAAAGATGAGGAAATTGATAGATCGGAGAAGAAGTTGGAGAATGCGTTGGTGTGCAAAATCCTTTCTCAGAAGCAAATTAATCCCAACATGTTCAAATCCAAGATGCCCCGAATATGGAACCAAGAACATACTACTATCAGTAAAGTGGGATTCAACTTGTTTCTGTGCAAGTTCAAGAACGGACGAATAAAAAGTCTAATTGAGGACAATGGCCCTTGGTTTTTTGACAAAGCATTGTTACTGTTCAAGGAGCCAAGGGGGGGCAACTACGGGGAAGATATTGAGTTCAGGTATGTGTCCTTTTGGATTCATTTTTATAAACTCCCATTTGCGTGTTTTTCCAGGAAAGTGGCAACGGAAATAGGGAGCATACTTGGACAGGTAAATCAGATTGATCTAGAGGAGGAGTTAGATCATTGTCGCGGTGGTTCGTTGAGAGTGAAAATACAAATAGATGCTACCAAGCCTTTGAAGAGGGGAATTTACTTATCTTCGGAGGATTCAAATGATGATCGATGGATTCCAATTACATATGAAAAGTTGTCGAATTTTTGTTATGGGTGTGGTATGTTGGGGCACATATTAAAGGAGTGCGAGTGTTCTAACTATGATGGTCTACCCGTGGAGGATCTTCCATATGAAGCATGGATCGAACCGGTTCTGTTGAAACCAAAAGAGTATGATTTTTTTTCCTAGGTCCATAGTTAATCAGGCTGGTCGTGGAAAAGGTCGAGGATGGGACGGCGGAAGAGGAGGGTGGAGAGGGATGCAACAAACAGACGAGGAGTCTGAGTTCGAGAAAAGAGAGAAGCTACCGGTCAAAAAAGGGAAAGAATTTGAAGAAGTGGTGGGGCGGGGCCAACCATCCAAAAATGGGTCTTCCCCGATGAACATAACGGCAACGAACATTCCAACAGAGGCAACACCGTCGATGGCTCCAATGGTCAAAATTACAGAAATGGAAACATTGGACAAAGAAACGGAGTCAAGGGGGGCGAAAATTAAGGAAGGAGAAATAAGTATGGCATTAAATGAGGATAATATCACAAAAGGAAATACTTGTATAAAGAATTCGGCTAGTGAATCTGGGAATAACGACCCAATTGAAAAGGAAAGTTATTGCTCAATTATGGAGGTTGATTTAGATGAGATTGGGTCAAAAGAGGAGAGTGGGTCAAAAGATGAGGAAAGGGTCAGTTCTATGGAGTCAACTTTTGCTTCTATTACAGGTCATTCACATGATCCCAAAGGAAAAGGAACTCTGCTGGACAACCCTCGTAACAGCCGAGAGGGTCAGGGTAAAACTAAAGGTTGGAAACGTATCCCTCGTAATAAAATGGAAAGTGAACAATCAATGGAAAATTTGTGTAAGCCTACAATCGGAGTCAAACACGCTATTAGTTTTGATGAGGCAGATGAAGAATTATGCAAAAAGAGGTTGATGGTTTTGGATCCGGAAAAAAATGCAAAATCGGTGGAGGTTGCGGGACAGCCCCGCCGAGCACAATGAAAACCTTAAGTTGGAATGTCCAGGGGCTGGGGAACCCCCGGACATTAAGAGCGCTGCGACACATCATTCGCAGCCACCAACCCCAATTGGTTTTCTTAATGGAAACCCGTCGTCAGGATAAAAGAGGAGATAGATATAAGAATGAGTTACAGTTTGATTGTTGTTTGCCAGTTCCGAGTAATGTTCAGAGTGGTGGCCTTCTGCTGATGTGGAAAAATGAGATTGATGTGACGATTCATCAGGACACATTGATGCTCTTGTGAAGTATAATAACTTCATGTGGAGATTCACGGGGATCTATGACAATCCTAGGAGAGAGCTTCATAAAGAAACATGGAATCTTATGAAGCGTCTGAGAGATGATAGTGATGTGTCGTGGGTGTTAGAGGGCGATTTCAATGAAATTCTCAGTAGCGAAGAGAAGCAGGGAGGGGTACCTCGTCAGGAAAATGTTATGCAAGCGTTTCGAGATGTGATTGATTTGTGAGGCCTTCTTAACCCAGGCTTTATTGGTCCTGATTTCACATGGCGTAATAACCATTTCCAGGCGATCTTATTTGGGAGAGAATTGACCGTTTTCTTCTGAATGTTCATATGCATAATAGATGCAGTTTCTTTAATGTTTCTCACTTGCCTCGCATAGCCTCTGATCATAGACCATTACTTGTTGAATAGTCCATTAAGCCCCTGAATCAAAGTTTTGTTTCTCCCAAGAGGCCTCGGAGATTTGAGGAAGAGTGGTGTAAGTATGAGGACTGTAGAGCTATTGTGGAGGAAGTTTGGAATTCTCAAGGTTGTCATGATATTATGGAATATTCTAATAAAACTATGAATTGTCTTATGAGTCTGTGCAACTGGAGCCGTCGTAAATATGGTGGATCGATTAGAGGAGCGATTTCGAAAATAGAAAGAGAGATTCAGAATCTTTCAAATAAGGATGGAAAATTCAATAGGGCTGTTTTGAGGGAAATGAAGGAAACTCTATAAAGCCTTCTAGAAGATGATGAGATCTACTGGAAGTAGAGATCTCGTGAAGAATGGTTGCTTTGGGGAGACAGAAACACCAAATGGTTTCATATGAGAGCCAATACGAGAAGGAAAAGGAATCGTATCAGGGGTCTTATGGACGACCTAGGAATCTGAACTGAAGAAGATAACAGAATGGAGTGTATTGTGAATAGCTATTTCTCTAAGATCTTCCAATCTTCGGAACCTCAGATGGAATCCATCGATCATATATTAGAAACCATTCCCACGTCCATCTCAGATGAGCAGAATGATGTTCTAGTTCAAAAATTTTCGAAGGAAGAGATTTGGGGGGTTCTTAAGAGTATGCATCCAATAAAAGCTCCTGGCCCAGATGGTCTTCAGGCGATCTTTTATCAGAAATTTTGGGATATTGTTGGGGAAGATACATGCAAGATCTGTCTGCAGTACCTTAATGGAGAGTTATCCTTAAAAGAAATTAATAAGACTCTCATTGCTCTTATCCCGAAGGTAAAGGATCCCAAAATGATGAAAGATTATCGTCCAATCAGTTTGTGTAATGTGATTTACAAAATCATTGCTAAAGTAATTGCCAACAGATTGAAACGTGTATTGGACATGGTCATATCTCCTACCCAATCTACTTTCGTGCCAGGTAGATTGATTACTGATAATGCCATCATTGGATTCGAATGTATTCATGCAGTGAAGAAAAGAAGATCTGGGAAGGACGGGGTTGTGGCCTTGAAACTCGATATGAGTAAGGCGTATGATCGTGTGGAATGGATATACATTCGGAGCATTTTGGGGAAAATGGGCTTTAACAGTAGATGGGTAGATCTAGTCATGAGATGCGTGGAGTCGGTTGCATTCCAGGTGTTGTTAAGTGGAACCCCGAGGAAGGAATTTGTTCCAAAACGGGGCCTTCGACAGGACGATCTCTCTCCCCGTATCTTTTCCTTATCTGCATTGAGGGGTTATCGGGGCTTTTAAATAGAGCTGATGTTACTAGGAAGGTGACAAGTTTGCAGATAAATAAGTATTGCCCTTCTCTTACTCAAAATTTTTATGCTGATGATAGTTTGTTATTTTTCCAAGCTACTAACACAGATTGCAGGCTATAAGAGATATCCTAAATACGTACGAGAAAGCTTCTGGACAAATAATTAACTATGAGAAATCAACCTTCATGGTGAGCCCTAATATAAAGGAGGTGATGATTCGTGCTATTCATGAGGAGCTGAAGGTCCAACACACAAAGAATTTAGGGCAATATCTTGGACTACCATCCCAGAACGCCAAGAATAAAAAGGAGATTTTCAGTAGCATCAAGGATCGAGTTTGGAGAGCTCTTCAAGGATGGAAAGGGAAGTTTTTCTCATCTGATGGGAAAAAATTGCTTATAAAGTCCATAGCGCAAGCTATTCCTAATTATGCTATGAGTTGTTTTAAATTTCCGTTTTCCCTGTGTAATGATTTGAATGCTCTTTGTGCTAGGTTCTGGTGGGGATCTACGGATTCAGAAAGGAAAATCCATTGGCGAAGCTGGAAGAAACTTTGTGTTTATAAAACGTGTGGTGGTCTAGGCTTCAAAGATTTATCTCTGTTCAATCATGTTATGCTGGCCAAACAAAGTTGGAGGCTGATTAGATATCCCAATAGTCTCTTAACCAAAGTTCTTAGGGGTCGGTACTTTAAAACAAGTCATTTTCTCAAAGCACCTCTAGGGTCCAATCTTTCCTACACGTGAAGGAGCATCCTTTGGGGGAGAGAGCTTTTCAAAGAAGGATATCGTTGGAAAGTTGGAGATGGTTTTAGTATTGACATTTCTAATGATCCTTGGATTCGTAAAGAGGGGATGGCCAAACCAATTTTCACCCATCCTAATATTAGACATTTTACTGTGGTTCAGCTTAAAAGCTCTAATGGCATGTGGAACGAACCTTTGGTTCGGGCTTCCTTTTTGGAAGTAGACGCTTCAGCCATTTTAGCTACTCCTACTAAGTCTAATATGGGGGAGGAATAAATTATTTGGAATCTTGACCCAAAAGGAAGATTCTCTGTGAAGAGTGCTTATCGCTTGGGATGTCAGATGAGCCAAAGATTCCAAGCTTCTTCATCTAATTCCAAGGAACGGGAATCTAGATAGAAGGTTTTTTGGAAGCTCAAACTACCCCCTAAGATTAAAATTTGCGGGTGGAAGCTCTATAATGACATATTACCAACTCTGTCCAACCTTAATAAAAGAGGGTTGGATGTGTGGCCTATATGTTTCCTTTGCAGGGAGAAAGTAGAGACAACTTCCCACCTCTTTTGGCATTGTAAGGTGACTAAAGGATTATGGGTTAGATATTTTCCTCTTGCTAGCTTGGATTGTTTTTTTTTTTTTTTTTTTTTTTTGCCAGGGAAGAATGGCCGATCTCTATGATTTTAGAGGGATTATGGCAGAGTATTGGGAATGCAAGGGAGATTGGTCATCAGATAAAATGCAGTAGTCTTATCATATGTTGGAAAATATGGTTTGTTCGTAATTCTATCAGTCACAATAATCAGAGACCAACATAAAGTGATATCAGAGACAATCTTCAACATCAGATCAGCAAATCAATTCAAGAGCTACTGGGAGAGGAAGAGTCTTACCGGACAAGTTGTCTCCAACCGTCTGTTCCAGATCGAAGCGAAGGCGATTTTCCAGATGTACCAGAAGAGGGCGGAAGCGACGACGACTCATTAGTTGATTCGACCGTGCAGAAGAAATGGATCCCCATCCTCGATGGCTGTTGGAAGCTAAGTTGTGATGCTTCTTGGAACACAGATCGCAAATGTGGTGGCGTGGGATGGGCTCTTCGCGACTGGAAAGGAGCTCTTGTAGCGGCGGATCTCATACGAGTTCATTTGGCGTGGGATATCAGTTGGCTCGAGGCTCTTGCAATTTCTGAAGGTCATTGGGAGATTCCCTCCAGTCACAATGGGAGTGAGACTTTTCGTGGAAAGTGA

mRNA sequence

ATGTCAGGATGGCCGAGTGGTCTAAGGCGCCAGACTCAAGTTCTGGTCTTCGTGAGAGGGCATAACGGTGGAAGAAGGGCGGCCAGGGTGCCAGATTGGAGCAGTCAGATCTGCGTAGAGGTGGTGTTCCTGAGGCGGTGGTCTTCGGCTATTATTGTCATGGAAGGACAGAAGGATGAAGAAACGTTGGTCAAACAACTCACAGAGCTGAAGGTTACTGAAGAAGAAAGAGCTAGTGTTTTCAAATTGAAAGATGAGGAAATTGATAGATCGGAGAAGAAGTTGGAGAATGCGTTGGTGTGCAAAATCCTTTCTCAGAAGCAAATTAATCCCAACATGTTCAAATCCAAGATGCCCCGAATATGGAACCAAGAACATACTACTATCAGTAAAGTGGGATTCAACTTGTTTCTGTGCAAGTTCAAGAACGGACGAATAAAAAGTCTAATTGAGGACAATGGCCCTTGGTTTTTTGACAAAGCATTGTTACTGTTCAAGGAGCCAAGGGGGGGCAACTACGGGGAAGATATTGAGTTCAGGTCCATAGTTAATCAGGCTGGTCGTGGAAAAGGTCGAGGATGGGACGGCGGAAGAGGAGGGTGGAGAGGGATGCAACAAACAGACGAGGAGTCTGAGTTCGAGAAAAGAGAGAAGCTACCGGTCAAAAAAGGGAAAGAATTTGAAGAAGTGGTGGGGCGGGGCCAACCATCCAAAAATGGGTCTTCCCCGATGAACATAACGGCAACGAACATTCCAACAGAGGCAACACCGTCGATGGCTCCAATGGTCAAAATTACAGAAATGGAAACATTGGACAAAGAAACGGAGTCAAGGGGGGCGAAAATTAAGGAAGGAGAAATAAGTATGGCATTAAATGAGGATAATATCACAAAAGGAAATACTTGTATAAAGAATTCGGCTAGTGAATCTGGGAATAACGACCCAATTGAAAAGGAAAGTTATTGCTCAATTATGGAGGTTGATTTAGATGAGATTGGGTCAAAAGAGGAGAGTGGGTCAAAAGATGAGGAAAGGGTCAGTTCTATGGAGTCAACTTTTGCTTCTATTACAGGTCATTCACATGATCCCAAAGGAAAAGGAACTCTGCTGGACAACCCTCGTAACAGCCGAGAGGGTCAGGGTAAAACTAAAGGTTGGAAACGTATCCCTCGTAATAAAATGGAAAGTGAACAATCAATGGAAAATTTGTGA

Coding sequence (CDS)

ATGTCAGGATGGCCGAGTGGTCTAAGGCGCCAGACTCAAGTTCTGGTCTTCGTGAGAGGGCATAACGGTGGAAGAAGGGCGGCCAGGGTGCCAGATTGGAGCAGTCAGATCTGCGTAGAGGTGGTGTTCCTGAGGCGGTGGTCTTCGGCTATTATTGTCATGGAAGGACAGAAGGATGAAGAAACGTTGGTCAAACAACTCACAGAGCTGAAGGTTACTGAAGAAGAAAGAGCTAGTGTTTTCAAATTGAAAGATGAGGAAATTGATAGATCGGAGAAGAAGTTGGAGAATGCGTTGGTGTGCAAAATCCTTTCTCAGAAGCAAATTAATCCCAACATGTTCAAATCCAAGATGCCCCGAATATGGAACCAAGAACATACTACTATCAGTAAAGTGGGATTCAACTTGTTTCTGTGCAAGTTCAAGAACGGACGAATAAAAAGTCTAATTGAGGACAATGGCCCTTGGTTTTTTGACAAAGCATTGTTACTGTTCAAGGAGCCAAGGGGGGGCAACTACGGGGAAGATATTGAGTTCAGGTCCATAGTTAATCAGGCTGGTCGTGGAAAAGGTCGAGGATGGGACGGCGGAAGAGGAGGGTGGAGAGGGATGCAACAAACAGACGAGGAGTCTGAGTTCGAGAAAAGAGAGAAGCTACCGGTCAAAAAAGGGAAAGAATTTGAAGAAGTGGTGGGGCGGGGCCAACCATCCAAAAATGGGTCTTCCCCGATGAACATAACGGCAACGAACATTCCAACAGAGGCAACACCGTCGATGGCTCCAATGGTCAAAATTACAGAAATGGAAACATTGGACAAAGAAACGGAGTCAAGGGGGGCGAAAATTAAGGAAGGAGAAATAAGTATGGCATTAAATGAGGATAATATCACAAAAGGAAATACTTGTATAAAGAATTCGGCTAGTGAATCTGGGAATAACGACCCAATTGAAAAGGAAAGTTATTGCTCAATTATGGAGGTTGATTTAGATGAGATTGGGTCAAAAGAGGAGAGTGGGTCAAAAGATGAGGAAAGGGTCAGTTCTATGGAGTCAACTTTTGCTTCTATTACAGGTCATTCACATGATCCCAAAGGAAAAGGAACTCTGCTGGACAACCCTCGTAACAGCCGAGAGGGTCAGGGTAAAACTAAAGGTTGGAAACGTATCCCTCGTAATAAAATGGAAAGTGAACAATCAATGGAAAATTTGTGA

Protein sequence

MSGWPSGLRRQTQVLVFVRGHNGGRRAARVPDWSSQICVEVVFLRRWSSAIIVMEGQKDEETLVKQLTELKVTEEERASVFKLKDEEIDRSEKKLENALVCKILSQKQINPNMFKSKMPRIWNQEHTTISKVGFNLFLCKFKNGRIKSLIEDNGPWFFDKALLLFKEPRGGNYGEDIEFRSIVNQAGRGKGRGWDGGRGGWRGMQQTDEESEFEKREKLPVKKGKEFEEVVGRGQPSKNGSSPMNITATNIPTEATPSMAPMVKITEMETLDKETESRGAKIKEGEISMALNEDNITKGNTCIKNSASESGNNDPIEKESYCSIMEVDLDEIGSKEESGSKDEERVSSMESTFASITGHSHDPKGKGTLLDNPRNSREGQGKTKGWKRIPRNKMESEQSMENL
Homology
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BLAST of Spg028850 vs. NCBI nr
Match: XP_022143536.1 (uncharacterized protein LOC111013413 [Momordica charantia])

HSP 1 Score: 105.5 bits (262), Expect = 1.1e-18
Identity = 52/120 (43.33%), Postives = 81/120 (67.50%), Query Frame = 0 

Query: 60  EETLVKQLTELKVTEEERASVFKLKDEEIDRSEKKLENALVCKILSQKQINPNMFKSKMP 119
           +E L +Q+  LK+T+EE+  +F + ++EI+  +K+ + +LVCK+L+ K I   +FK+ MP
Sbjct: 3   DELLSRQVERLKLTKEEKGEIFDMGEDEIEDYDKQAQFSLVCKLLTWKNIPGEVFKNMMP 62

Query: 120 RIWNQEHTTISKVGFNLFLCKFKNGRIKSLIEDNGPWFFDKALLLFKEPRGGNYGEDIEF 179
           RIW   +  I  VG NLFLCKFK  R KS I +NGP FFDK++++ +EPR      ++E+
Sbjct: 63  RIWVNVNVKIESVGKNLFLCKFKTVRDKSKILNNGPSFFDKSMVMLEEPRANCNFNELEY 122

[Close]
BLAST of Spg028850 vs. NCBI nr
Match: XP_022154991.1 (uncharacterized protein LOC111022134 isoform X2 [Momordica charantia])

HSP 1 Score: 104.8 bits (260), Expect = 1.8e-18
Identity = 56/130 (43.08%), Postives = 84/130 (64.62%), Query Frame = 0 

Query: 61  ETLVKQLTE-LKVTEEER--------ASVFKLKDEEIDRSEKKLENALVCKILSQKQINP 120
           + L+ QL E LK+T+EE+          +F + ++EI+  +K+ + +LVCK+L+ K I  
Sbjct: 3   DELLSQLVERLKLTKEEKGEIFDMGEGEIFDMGEDEIEDYDKQAQFSLVCKLLTLKNIPG 62

Query: 121 NMFKSKMPRIWNQEHTTISKVGFNLFLCKFKNGRIKSLIEDNGPWFFDKALLLFKEPRGG 180
            +FK+ MPRIW   +  I  VG NLFLCKFK  R KS I +NGPWFFDK++++ +EPR  
Sbjct: 63  EVFKNMMPRIWANVNVKIESVGKNLFLCKFKTVRDKSKILNNGPWFFDKSMVMLEEPRAN 122

Query: 181 NYGEDIEFRS 182
               ++EFR+
Sbjct: 123 CNFNELEFRT 132

[Close]
BLAST of Spg028850 vs. NCBI nr
Match: XP_022154990.1 (uncharacterized protein LOC111022134 isoform X1 [Momordica charantia])

HSP 1 Score: 104.4 bits (259), Expect = 2.4e-18
Identity = 56/129 (43.41%), Postives = 83/129 (64.34%), Query Frame = 0 

Query: 61  ETLVKQLTE-LKVTEEER--------ASVFKLKDEEIDRSEKKLENALVCKILSQKQINP 120
           + L+ QL E LK+T+EE+          +F + ++EI+  +K+ + +LVCK+L+ K I  
Sbjct: 3   DELLSQLVERLKLTKEEKGEIFDMGEGEIFDMGEDEIEDYDKQAQFSLVCKLLTLKNIPG 62

Query: 121 NMFKSKMPRIWNQEHTTISKVGFNLFLCKFKNGRIKSLIEDNGPWFFDKALLLFKEPRGG 180
            +FK+ MPRIW   +  I  VG NLFLCKFK  R KS I +NGPWFFDK++++ +EPR  
Sbjct: 63  EVFKNMMPRIWANVNVKIESVGKNLFLCKFKTVRDKSKILNNGPWFFDKSMVMLEEPRAN 122

[Close]
BLAST of Spg028850 vs. NCBI nr
Match: XP_035546596.1 (uncharacterized protein LOC118348645 [Juglans regia])

HSP 1 Score: 70.1 bits (170), Expect = 5.0e-08
Identity = 41/121 (33.88%), Postives = 66/121 (54.55%), Query Frame = 0 

Query: 60  EETLVKQLTELKVTEEERASVFKLKDEEIDRSEKKLENALVCKILSQKQINPNMFKSKMP 119
           EE +      LK+TEEE+   + LK+EEI  S     + LV  + + +++N   FK+ M 
Sbjct: 2   EEEISHHCKSLKLTEEEQQEYY-LKEEEITFSHDISNSCLVALVAADREVNKGAFKATMT 61

Query: 120 RIWNQE-HTTISKVGFNLFLCKFKNGRIKSLIEDNGPWFFDKALLLFKEPRGGNYGEDIE 179
           R+WN E   T   +G N FL +F N  +++ +    PW FD+ L+  +E +G    +DI+
Sbjct: 62  RLWNGEGGITFKDLGRNKFLLEFHNSTVRTRVLTGRPWSFDRNLICIQECKGRLALKDID 121

[Close]
BLAST of Spg028850 vs. NCBI nr
Match: XP_021758384.1 (uncharacterized protein LOC110723340 [Chenopodium quinoa])

HSP 1 Score: 68.9 bits (167), Expect = 1.1e-07
Identity = 43/124 (34.68%), Postives = 67/124 (54.03%), Query Frame = 0 

Query: 61  ETLVKQLTELKVTEEERASVFKLKDEEI-DRSEKKLENALVCKILSQKQINPNMFKSKMP 120
           + ++K+  +LK+T++E   V    + E  D S  +L  ALV ++ + K  N +  K  + 
Sbjct: 2   QDMIKEWEKLKLTDDENLVVMGNSNAETEDNSNNQLRLALVGRLCTVKPFNVDAMKKTLT 61

Query: 121 RIWNQE-HTTISKVGFNLFLCKFKNGRIKSLIEDNGPWFFDKALLLFKEPRGGNYGEDIE 180
            +W  + +  I  +  NLF+ +F N   KS I +  PWFFD  LLLFKE +GG     IE
Sbjct: 62  NVWRLKCNIAIRTMDTNLFVFQFFNEADKSRILEGMPWFFDGKLLLFKEIQGGEQPSKIE 121

Query: 181 FRSI 183
           F+ I
Sbjct: 122 FKKI 125

[Close]
BLAST of Spg028850 vs. ExPASy TrEMBL
Match: A0A6J1CQJ5 (uncharacterized protein LOC111013413 OS=Momordica charantia OX=3673 GN=LOC111013413 PE=4 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 5.2e-19
Identity = 52/120 (43.33%), Postives = 81/120 (67.50%), Query Frame = 0 

Query: 60  EETLVKQLTELKVTEEERASVFKLKDEEIDRSEKKLENALVCKILSQKQINPNMFKSKMP 119
           +E L +Q+  LK+T+EE+  +F + ++EI+  +K+ + +LVCK+L+ K I   +FK+ MP
Sbjct: 3   DELLSRQVERLKLTKEEKGEIFDMGEDEIEDYDKQAQFSLVCKLLTWKNIPGEVFKNMMP 62

Query: 120 RIWNQEHTTISKVGFNLFLCKFKNGRIKSLIEDNGPWFFDKALLLFKEPRGGNYGEDIEF 179
           RIW   +  I  VG NLFLCKFK  R KS I +NGP FFDK++++ +EPR      ++E+
Sbjct: 63  RIWVNVNVKIESVGKNLFLCKFKTVRDKSKILNNGPSFFDKSMVMLEEPRANCNFNELEY 122

[Close]
BLAST of Spg028850 vs. ExPASy TrEMBL
Match: A0A6J1DQC9 (uncharacterized protein LOC111022134 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111022134 PE=4 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 8.8e-19
Identity = 56/130 (43.08%), Postives = 84/130 (64.62%), Query Frame = 0 

Query: 61  ETLVKQLTE-LKVTEEER--------ASVFKLKDEEIDRSEKKLENALVCKILSQKQINP 120
           + L+ QL E LK+T+EE+          +F + ++EI+  +K+ + +LVCK+L+ K I  
Sbjct: 3   DELLSQLVERLKLTKEEKGEIFDMGEGEIFDMGEDEIEDYDKQAQFSLVCKLLTLKNIPG 62

Query: 121 NMFKSKMPRIWNQEHTTISKVGFNLFLCKFKNGRIKSLIEDNGPWFFDKALLLFKEPRGG 180
            +FK+ MPRIW   +  I  VG NLFLCKFK  R KS I +NGPWFFDK++++ +EPR  
Sbjct: 63  EVFKNMMPRIWANVNVKIESVGKNLFLCKFKTVRDKSKILNNGPWFFDKSMVMLEEPRAN 122

Query: 181 NYGEDIEFRS 182
               ++EFR+
Sbjct: 123 CNFNELEFRT 132

[Close]
BLAST of Spg028850 vs. ExPASy TrEMBL
Match: A0A6J1DL64 (uncharacterized protein LOC111022134 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111022134 PE=4 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 1.2e-18
Identity = 56/129 (43.41%), Postives = 83/129 (64.34%), Query Frame = 0 

Query: 61  ETLVKQLTE-LKVTEEER--------ASVFKLKDEEIDRSEKKLENALVCKILSQKQINP 120
           + L+ QL E LK+T+EE+          +F + ++EI+  +K+ + +LVCK+L+ K I  
Sbjct: 3   DELLSQLVERLKLTKEEKGEIFDMGEGEIFDMGEDEIEDYDKQAQFSLVCKLLTLKNIPG 62

Query: 121 NMFKSKMPRIWNQEHTTISKVGFNLFLCKFKNGRIKSLIEDNGPWFFDKALLLFKEPRGG 180
            +FK+ MPRIW   +  I  VG NLFLCKFK  R KS I +NGPWFFDK++++ +EPR  
Sbjct: 63  EVFKNMMPRIWANVNVKIESVGKNLFLCKFKTVRDKSKILNNGPWFFDKSMVMLEEPRAN 122

[Close]
BLAST of Spg028850 vs. ExPASy TrEMBL
Match: A0A6P9EGW2 (uncharacterized protein LOC118348645 OS=Juglans regia OX=51240 GN=LOC118348645 PE=4 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 2.4e-08
Identity = 41/121 (33.88%), Postives = 66/121 (54.55%), Query Frame = 0 

Query: 60  EETLVKQLTELKVTEEERASVFKLKDEEIDRSEKKLENALVCKILSQKQINPNMFKSKMP 119
           EE +      LK+TEEE+   + LK+EEI  S     + LV  + + +++N   FK+ M 
Sbjct: 2   EEEISHHCKSLKLTEEEQQEYY-LKEEEITFSHDISNSCLVALVAADREVNKGAFKATMT 61

Query: 120 RIWNQE-HTTISKVGFNLFLCKFKNGRIKSLIEDNGPWFFDKALLLFKEPRGGNYGEDIE 179
           R+WN E   T   +G N FL +F N  +++ +    PW FD+ L+  +E +G    +DI+
Sbjct: 62  RLWNGEGGITFKDLGRNKFLLEFHNSTVRTRVLTGRPWSFDRNLICIQECKGRLALKDID 121

[Close]
BLAST of Spg028850 vs. ExPASy TrEMBL
Match: A0A5C7IMZ7 (DUF4283 domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_005566 PE=4 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 7.0e-08
Identity = 40/120 (33.33%), Postives = 65/120 (54.17%), Query Frame = 0 

Query: 64  VKQLTELKVTEEERASVFKLKDEEIDRSEKKLENALVCKILSQKQINPNMFKSKMPRIW- 123
           V +L E    +E+   + +L++   ++ EK+L   L  K+LS K +N + F + MP+IW 
Sbjct: 7   VAKLCEALTLKEKEGPLMQLQEGMTNKGEKRLALRLAGKLLSSKPVNRDAFMAVMPKIWV 66

Query: 124 NQEHTTISKVGFNLFLCKFKNGRIKSLIEDNGPWFFDKALLLFKEPRGGNYGEDIEFRSI 183
             +   I  +  N F   FKN + +  I + GPW FDKALL+  EP+G    +D+ F  +
Sbjct: 67  TIDGFDIEIIDGNTFSFTFKNEKDQLRILNRGPWSFDKALLVLVEPKGKGDTQDMSFNRV 126

[Close]
BLAST of Spg028850 vs. TAIR 10
Match: AT4G25640.2 (detoxifying efflux carrier 35 )

HSP 1 Score: 43.9 bits (102), Expect = 3.6e-04
Identity = 19/19 (100.00%), Postives = 19/19 (100.00%), Query Frame = 0 

Query: 2   SGWPSGLRRQTQVLVFVRG 21
           SGWPSGLRRQTQVLVFVRG
Sbjct: 489 SGWPSGLRRQTQVLVFVRG 507

The following BLAST results are available for this feature:
BLAST of Spg028850 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022143536.11.1e-1843.33uncharacterized protein LOC111013413 [Momordica charantia][more]
XP_022154991.11.8e-1843.08uncharacterized protein LOC111022134 isoform X2 [Momordica charantia][more]
XP_022154990.12.4e-1843.41uncharacterized protein LOC111022134 isoform X1 [Momordica charantia][more]
XP_035546596.15.0e-0833.88uncharacterized protein LOC118348645 [Juglans regia][more]
XP_021758384.11.1e-0734.68uncharacterized protein LOC110723340 [Chenopodium quinoa][more]
BLAST of Spg028850 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Spg028850 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1CQJ55.2e-1943.33uncharacterized protein LOC111013413 OS=Momordica charantia OX=3673 GN=LOC111013... [more]
A0A6J1DQC98.8e-1943.08uncharacterized protein LOC111022134 isoform X2 OS=Momordica charantia OX=3673 G... [more]
A0A6J1DL641.2e-1843.41uncharacterized protein LOC111022134 isoform X1 OS=Momordica charantia OX=3673 G... [more]
A0A6P9EGW22.4e-0833.88uncharacterized protein LOC118348645 OS=Juglans regia OX=51240 GN=LOC118348645 P... [more]
A0A5C7IMZ77.0e-0833.33DUF4283 domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_005566 ... [more]
BLAST of Spg028850 vs. TAIR 10
Match NameE-valueIdentityDescription
AT4G25640.23.6e-04100.00detoxifying efflux carrier 35 [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR025558Domain of unknown function DUF4283PFAMPF14111DUF4283coord: 88..166
e-value: 4.7E-7
score: 29.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 328..348
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 377..395
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 328..403
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 188..252
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 235..252
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 205..232

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg028850.1Spg028850.1mRNA