Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. CCGCTCAGCACCCCCCCTTGCGTTTGCGTGTGTTCCAGCCAGCCCCATCCGACTTCCTTCTTCCTTCCCGTCGGTGTCAGGACCCACAGGCCGATTCCGGCGTCTTCCTCCCTGCGGTGTGTTGCGCCGCCACCAGCAGCCAAGCCCCGCCGTCCCTCTTCATCTCTTCCTCCCTCGCGTGTTGTTCGGGTTGCAGCAGGTCCCTCTTCGCGTGAGCAGTCACAGTTCCCGTCGTCTATCTATCTCTCTCTCCCTCTCTCGTTCTTCCTCACGCTGAAGCCACAGCTCTCTCTCTCTCCCATGTTCAGTCGCCGGCAGCAGCAGACCCGTGGCCCCTGTATTCACGAGCGTCGGCCAGCACCCACAGCTTCGGTTTTTCACCTTCAAACTCGCGTGTAAGGTCTCTTTTTCTCTCGATTCTCTTTCAAGTTCCTCAAGCAGCGAGTTTAATCCTCTGTCTTCTCTTGTTTTTGGCTGGGCTAGTGAGTAGAAGCTGGAATCTTCGTTGTTCTGGTGTTTAGGCGCGTTCGGGCTGATTTAAGGATCGTTTCGGCGTGCTTAGGCTCTTTCGGTAAGCTCTCAGCATTACCCATGCTTTATAAACCTCAAATTTAGATTACCCACTCTTGTTCGCCCTTAGAATGGAGCGTTTGGTTTGATTTCTTGATTTTCCAATGCTGTGCAGTGCCGTCTTGGGTTTGAAATCATTCTTGCCTTGTGACCCATCATCCGTTTAGCCTTAAACTTGAACAACCAGTGCCTAGGGTCTCTAAGCAAGTGGTTTTAAACCTCTTTGCTTGCTGGACAGCACGTGTTCGAGGTCTTTCAGACGCTGAACGGTAAATTCCAGCACCCCTAGTTCTTTTTCTCAAGTCTATTAGGTGTTTTAAATCTATTTCCTAACCCTTAGAAATCATTGCTTGTAGTTTGAGCTCTTTAGGCTCTTCCAGTTGGTTCTGTTAGTCTCTTAGGATCGTTTAAGAGTGTTAGAGCTTCCGGTAAGTAGTTCTTACTTGCTGAAGTCTGTTTGACTGTGTGATGCATGCTGAATGTTTACTTGCTTTATAACTACTCTCATGATTATTGCTTCTCTGAATATATGTACATATATATGATTTCGTTGAAAAGCATGACTGTTGTTGCGTGTTGATTTGATGTAAAGCATGTTGGCTCTGTTTTGCATTCGTGAGTCAAGCATGAGTTGAGAGATGTGGTCACATGTATAATGCTTAGTGGGCATGATTATGAGTCTAGAAGCATGTTGCAGGGCATATGCATTCTAGTAGATGTGAGATATAGGTCAGGGACCTAAAGTGTGAAAGAAAGGAAAGTTGGGTGAGTGTCAGTGCACCTCAGGTACAAATGGTCGAGGGGTGGCACGTCACCATTGGTTTAAGAGGAGCATCGAGGCCTTGGGTACAAATGGTCAAATGTCGATGTGATGAGTCTAGAAAGCAAGTGTTGGGCGCCTGGGGAAGGGCCAATGCTTTGCTAAGTCATCGGTGCGCCTTGGGTACAAATGGTCAAGGGGCGATACACAGTTCGGGGCCTTGGGTACAAATGGTCAGGGGACAGTGCGACTCGAAGGATTAGTCTTGGAGAGCCATGTGAGGGCTAAATATGAGCGTTGAGTGAGCTCGTGGAGCTTGAGTGGTTAGCAAGTTGCATATAGAGAGATGCATGAGTTATGGCTTAGGAGAGTCATTTGTTTTTTACTAGCTTTTGAGCATGACATTGTGTTTACCGCTTTTAAGAAGCATGTTGTTTGCGCATGAAGAGCATGTTGTTTGCTTGTTTGCTGTTTGATGGCTTCTCAGGTAGGGGCTGCTTACCAGTACCTTAGTGTACTGACCCCCTCCCCTCTCTCTCCCCCCAACTACCAGATTTTGCAGGTTATGAGGACTGTGTGGACCATGGTGATGCGGAGGAGGCATACGAGGAAGGACCTTAG mRNA sequence CCGCTCAGCACCCCCCCTTGCGTTTGCGTGTGTTCCAGCCAGCCCCATCCGACTTCCTTCTTCCTTCCCGTCGGTGTCAGGACCCACAGGCCGATTCCGGCGTCTTCCTCCCTGCGGTGTGTTGCGCCGCCACCAGCAGCCAAGCCCCGCCGTCCCTCTTCATCTCTTCCTCCCTCGCGTGTTGTTCGGGTTGCAGCAGGTCCCTCTTCGCGTGAGCAGTCACAGTTCCCGTCGTCTATCTATCTCTCTCTCCCTCTCTCGTTCTTCCTCACGCTGAAGCCACAGCTCTCTCTCTCTCCCATGTTCAGTCGCCGGCAGCAGCAGACCCGTGGCCCCTGTATTCACGAGCGTCGGCCAGCACCCACAGCTTCGGTTTTTCACCTTCAAACTCGCGTGCGCGTTCGGGCTGATTTAAGGATCGTTTCGGCGTGCTTAGGCTCTTTCGCACGTGTTCGAGGTCTTTCAGACGCTGAACGTCTCTTAGGATCGTTTAAGAGTGTTAGAGCTTCCGTCAAGCATGAGTTGAGAGATGTGGTCACATGTATAATGCTTAGTGGGCATGATTATGAGTCTAGAAGCATGTTGCAGGGCATATGCATTCTAGTAGATAAAGCAAGTGTTGGGCGCCTGGGGAAGGGCCAATGCTTTGCTAAGTCATCGGTGCGCCTTGGGTACAAATGGTCAAGGGGCGATACACAGTTCGGGGCCTTGGGTACAAATGGTCAGGGGACAGTGCGACTCGAAGGATTAGTCTTGGAGAGCCATGTGAGGGCTAAATATGAGCATTTTGCAGGTTATGAGGACTGTGTGGACCATGGTGATGCGGAGGAGGCATACGAGGAAGGACCTTAG Coding sequence (CDS) CCGCTCAGCACCCCCCCTTGCGTTTGCGTGTGTTCCAGCCAGCCCCATCCGACTTCCTTCTTCCTTCCCGTCGGTGTCAGGACCCACAGGCCGATTCCGGCGTCTTCCTCCCTGCGGTGTGTTGCGCCGCCACCAGCAGCCAAGCCCCGCCGTCCCTCTTCATCTCTTCCTCCCTCGCGTGTTGTTCGGGTTGCAGCAGGTCCCTCTTCGCGTGAGCAGTCACAGTTCCCGTCGTCTATCTATCTCTCTCTCCCTCTCTCGTTCTTCCTCACGCTGAAGCCACAGCTCTCTCTCTCTCCCATGTTCAGTCGCCGGCAGCAGCAGACCCGTGGCCCCTGTATTCACGAGCGTCGGCCAGCACCCACAGCTTCGGTTTTTCACCTTCAAACTCGCGTGCGCGTTCGGGCTGATTTAAGGATCGTTTCGGCGTGCTTAGGCTCTTTCGCACGTGTTCGAGGTCTTTCAGACGCTGAACGTCTCTTAGGATCGTTTAAGAGTGTTAGAGCTTCCGTCAAGCATGAGTTGAGAGATGTGGTCACATGTATAATGCTTAGTGGGCATGATTATGAGTCTAGAAGCATGTTGCAGGGCATATGCATTCTAGTAGATAAAGCAAGTGTTGGGCGCCTGGGGAAGGGCCAATGCTTTGCTAAGTCATCGGTGCGCCTTGGGTACAAATGGTCAAGGGGCGATACACAGTTCGGGGCCTTGGGTACAAATGGTCAGGGGACAGTGCGACTCGAAGGATTAGTCTTGGAGAGCCATGTGAGGGCTAAATATGAGCATTTTGCAGGTTATGAGGACTGTGTGGACCATGGTGATGCGGAGGAGGCATACGAGGAAGGACCTTAG Protein sequence PLSTPPCVCVCSSQPHPTSFFLPVGVRTHRPIPASSSLRCVAPPPAAKPRRPSSSLPPSRVVRVAAGPSSREQSQFPSSIYLSLPLSFFLTLKPQLSLSPMFSRRQQQTRGPCIHERRPAPTASVFHLQTRVRVRADLRIVSACLGSFARVRGLSDAERLLGSFKSVRASVKHELRDVVTCIMLSGHDYESRSMLQGICILVDKASVGRLGKGQCFAKSSVRLGYKWSRGDTQFGALGTNGQGTVRLEGLVLESHVRAKYEHFAGYEDCVDHGDAEEAYEEGP
Homology
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 35..60 |
Relationships
This mRNA is a part of the following gene feature(s):
| Feature Name | Unique Name | Type |
|---|
| Spg010408 | Spg010408 | gene |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Type |
|---|
| Spg010408.1-cds | Spg010408.1-cds-scaffold5:11304368..11304435 | CDS |
| Spg010408.1-cds | Spg010408.1-cds-scaffold5:11304693..11304867 | CDS |
| Spg010408.1-cds | Spg010408.1-cds-scaffold5:11305031..11305128 | CDS |
| Spg010408.1-cds | Spg010408.1-cds-scaffold5:11305321..11305355 | CDS |
| Spg010408.1-cds | Spg010408.1-cds-scaffold5:11305480..11305510 | CDS |
| Spg010408.1-cds | Spg010408.1-cds-scaffold5:11305748..11305797 | CDS |
| Spg010408.1-cds | Spg010408.1-cds-scaffold5:11305924..11306318 | CDS |
The following polypeptide feature(s) derives from this mRNA:
| Feature Name | Unique Name | Type |
|---|
| Spg010408.1 | Spg010408.1-protein | polypeptide |
|
