Spg010408 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg010408
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Unknown protein
Location	scaffold5: 11304368 .. 11306318 (-)
RNA-Seq Expression	Spg010408
Synteny	Spg010408

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CCGCTCAGCACCCCCCCTTGCGTTTGCGTGTGTTCCAGCCAGCCCCATCCGACTTCCTTCTTCCTTCCCGTCGGTGTCAGGACCCACAGGCCGATTCCGGCGTCTTCCTCCCTGCGGTGTGTTGCGCCGCCACCAGCAGCCAAGCCCCGCCGTCCCTCTTCATCTCTTCCTCCCTCGCGTGTTGTTCGGGTTGCAGCAGGTCCCTCTTCGCGTGAGCAGTCACAGTTCCCGTCGTCTATCTATCTCTCTCTCCCTCTCTCGTTCTTCCTCACGCTGAAGCCACAGCTCTCTCTCTCTCCCATGTTCAGTCGCCGGCAGCAGCAGACCCGTGGCCCCTGTATTCACGAGCGTCGGCCAGCACCCACAGCTTCGGTTTTTCACCTTCAAACTCGCGTGTAAGGTCTCTTTTTCTCTCGATTCTCTTTCAAGTTCCTCAAGCAGCGAGTTTAATCCTCTGTCTTCTCTTGTTTTTGGCTGGGCTAGTGAGTAGAAGCTGGAATCTTCGTTGTTCTGGTGTTTAGGCGCGTTCGGGCTGATTTAAGGATCGTTTCGGCGTGCTTAGGCTCTTTCGGTAAGCTCTCAGCATTACCCATGCTTTATAAACCTCAAATTTAGATTACCCACTCTTGTTCGCCCTTAGAATGGAGCGTTTGGTTTGATTTCTTGATTTTCCAATGCTGTGCAGTGCCGTCTTGGGTTTGAAATCATTCTTGCCTTGTGACCCATCATCCGTTTAGCCTTAAACTTGAACAACCAGTGCCTAGGGTCTCTAAGCAAGTGGTTTTAAACCTCTTTGCTTGCTGGACAGCACGTGTTCGAGGTCTTTCAGACGCTGAACGGTAAATTCCAGCACCCCTAGTTCTTTTTCTCAAGTCTATTAGGTGTTTTAAATCTATTTCCTAACCCTTAGAAATCATTGCTTGTAGTTTGAGCTCTTTAGGCTCTTCCAGTTGGTTCTGTTAGTCTCTTAGGATCGTTTAAGAGTGTTAGAGCTTCCGGTAAGTAGTTCTTACTTGCTGAAGTCTGTTTGACTGTGTGATGCATGCTGAATGTTTACTTGCTTTATAACTACTCTCATGATTATTGCTTCTCTGAATATATGTACATATATATGATTTCGTTGAAAAGCATGACTGTTGTTGCGTGTTGATTTGATGTAAAGCATGTTGGCTCTGTTTTGCATTCGTGAGTCAAGCATGAGTTGAGAGATGTGGTCACATGTATAATGCTTAGTGGGCATGATTATGAGTCTAGAAGCATGTTGCAGGGCATATGCATTCTAGTAGATGTGAGATATAGGTCAGGGACCTAAAGTGTGAAAGAAAGGAAAGTTGGGTGAGTGTCAGTGCACCTCAGGTACAAATGGTCGAGGGGTGGCACGTCACCATTGGTTTAAGAGGAGCATCGAGGCCTTGGGTACAAATGGTCAAATGTCGATGTGATGAGTCTAGAAAGCAAGTGTTGGGCGCCTGGGGAAGGGCCAATGCTTTGCTAAGTCATCGGTGCGCCTTGGGTACAAATGGTCAAGGGGCGATACACAGTTCGGGGCCTTGGGTACAAATGGTCAGGGGACAGTGCGACTCGAAGGATTAGTCTTGGAGAGCCATGTGAGGGCTAAATATGAGCGTTGAGTGAGCTCGTGGAGCTTGAGTGGTTAGCAAGTTGCATATAGAGAGATGCATGAGTTATGGCTTAGGAGAGTCATTTGTTTTTTACTAGCTTTTGAGCATGACATTGTGTTTACCGCTTTTAAGAAGCATGTTGTTTGCGCATGAAGAGCATGTTGTTTGCTTGTTTGCTGTTTGATGGCTTCTCAGGTAGGGGCTGCTTACCAGTACCTTAGTGTACTGACCCCCTCCCCTCTCTCTCCCCCCAACTACCAGATTTTGCAGGTTATGAGGACTGTGTGGACCATGGTGATGCGGAGGAGGCATACGAGGAAGGACCTTAG

mRNA sequence

CCGCTCAGCACCCCCCCTTGCGTTTGCGTGTGTTCCAGCCAGCCCCATCCGACTTCCTTCTTCCTTCCCGTCGGTGTCAGGACCCACAGGCCGATTCCGGCGTCTTCCTCCCTGCGGTGTGTTGCGCCGCCACCAGCAGCCAAGCCCCGCCGTCCCTCTTCATCTCTTCCTCCCTCGCGTGTTGTTCGGGTTGCAGCAGGTCCCTCTTCGCGTGAGCAGTCACAGTTCCCGTCGTCTATCTATCTCTCTCTCCCTCTCTCGTTCTTCCTCACGCTGAAGCCACAGCTCTCTCTCTCTCCCATGTTCAGTCGCCGGCAGCAGCAGACCCGTGGCCCCTGTATTCACGAGCGTCGGCCAGCACCCACAGCTTCGGTTTTTCACCTTCAAACTCGCGTGCGCGTTCGGGCTGATTTAAGGATCGTTTCGGCGTGCTTAGGCTCTTTCGCACGTGTTCGAGGTCTTTCAGACGCTGAACGTCTCTTAGGATCGTTTAAGAGTGTTAGAGCTTCCGTCAAGCATGAGTTGAGAGATGTGGTCACATGTATAATGCTTAGTGGGCATGATTATGAGTCTAGAAGCATGTTGCAGGGCATATGCATTCTAGTAGATAAAGCAAGTGTTGGGCGCCTGGGGAAGGGCCAATGCTTTGCTAAGTCATCGGTGCGCCTTGGGTACAAATGGTCAAGGGGCGATACACAGTTCGGGGCCTTGGGTACAAATGGTCAGGGGACAGTGCGACTCGAAGGATTAGTCTTGGAGAGCCATGTGAGGGCTAAATATGAGCATTTTGCAGGTTATGAGGACTGTGTGGACCATGGTGATGCGGAGGAGGCATACGAGGAAGGACCTTAG

Coding sequence (CDS)

CCGCTCAGCACCCCCCCTTGCGTTTGCGTGTGTTCCAGCCAGCCCCATCCGACTTCCTTCTTCCTTCCCGTCGGTGTCAGGACCCACAGGCCGATTCCGGCGTCTTCCTCCCTGCGGTGTGTTGCGCCGCCACCAGCAGCCAAGCCCCGCCGTCCCTCTTCATCTCTTCCTCCCTCGCGTGTTGTTCGGGTTGCAGCAGGTCCCTCTTCGCGTGAGCAGTCACAGTTCCCGTCGTCTATCTATCTCTCTCTCCCTCTCTCGTTCTTCCTCACGCTGAAGCCACAGCTCTCTCTCTCTCCCATGTTCAGTCGCCGGCAGCAGCAGACCCGTGGCCCCTGTATTCACGAGCGTCGGCCAGCACCCACAGCTTCGGTTTTTCACCTTCAAACTCGCGTGCGCGTTCGGGCTGATTTAAGGATCGTTTCGGCGTGCTTAGGCTCTTTCGCACGTGTTCGAGGTCTTTCAGACGCTGAACGTCTCTTAGGATCGTTTAAGAGTGTTAGAGCTTCCGTCAAGCATGAGTTGAGAGATGTGGTCACATGTATAATGCTTAGTGGGCATGATTATGAGTCTAGAAGCATGTTGCAGGGCATATGCATTCTAGTAGATAAAGCAAGTGTTGGGCGCCTGGGGAAGGGCCAATGCTTTGCTAAGTCATCGGTGCGCCTTGGGTACAAATGGTCAAGGGGCGATACACAGTTCGGGGCCTTGGGTACAAATGGTCAGGGGACAGTGCGACTCGAAGGATTAGTCTTGGAGAGCCATGTGAGGGCTAAATATGAGCATTTTGCAGGTTATGAGGACTGTGTGGACCATGGTGATGCGGAGGAGGCATACGAGGAAGGACCTTAG

Protein sequence

PLSTPPCVCVCSSQPHPTSFFLPVGVRTHRPIPASSSLRCVAPPPAAKPRRPSSSLPPSRVVRVAAGPSSREQSQFPSSIYLSLPLSFFLTLKPQLSLSPMFSRRQQQTRGPCIHERRPAPTASVFHLQTRVRVRADLRIVSACLGSFARVRGLSDAERLLGSFKSVRASVKHELRDVVTCIMLSGHDYESRSMLQGICILVDKASVGRLGKGQCFAKSSVRLGYKWSRGDTQFGALGTNGQGTVRLEGLVLESHVRAKYEHFAGYEDCVDHGDAEEAYEEGP

Homology

The following BLAST results are available for this feature:

BLAST of Spg010408 vs.


Match Name	E-value	Identity	Description

BLAST of Spg010408 vs.


Match Name	E-value	Identity	Description

BLAST of Spg010408 vs.


Match Name	E-value	Identity	Description

BLAST of Spg010408 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 35..60

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg010408.1	Spg010408.1	mRNA