Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCAATCACTACCTTCAAACTCCCGCCATTGATGGAGTTCACACAGTTGATTTCCCGAATCACCGAAACCTTCTCGCCAATTCAAAGAAACTCAAGTAAAATCCTCGCCTCTTCCTCATCCAAATGCCCTAATTCCCAATTACCAGTTCCATCAAATTCGCCCAAACCATCGAAATCCCTACAGCGAAGCACTCCAAGAGACGAAAACAAGAGCAGATTCAGAGAAGAAAACATACCGACGATGTCTGAGATTCTCGCGGCTGGCAAGGCCCAGAATCTGGACCTCCGGCTTCAAACGTTGGGGCCGTTCTTCAGAATCACGGCGAAAAGCTTGGAATCGCAGCAGGAGGTTGGGAAGGCAGAGGGATTGGTTAGAGTGTGGTTGGGAGGGAGGATTCTTCATCTGGATTCGATCCGATTGAGCAGAGAGAGCTTGGGAATGGAGAAGTCGATCTTCGGACTCGGATTGTTCATTGGCGCTGTTGCGATTCGATATGGGTTCGATTGTGGATGCAAGACGGCTGAGTTATTGGCGATCAACGACTCGGATCTTTACCATTCCAAGGTTGTTTTCTTCTCTCTTAGCTCTTTCTCTCGGATACAATTCAATTGAAGTAGCAAGGTTCAGTTTTTTAAGGAAATATTTTTAGGTTAGAGTTTTTAATTTAGACCTTAACCTTTTAAAAGTTTGAATTTTATTCTTTATTAAAAAAAAATCATTTTTTACCCCAAACTTAATAAGGTGTATTAATTTTTATCATAAATTTTTAATTTCATTAAATTGCACATTAAACTTAGATAAGTGTTACAATGTTTACCTTAAACATGATTAAGTATTACAATTTTTACGTTGTGATAGTTCTTCGTTTGAAGAATTGTTAAAAAAAGTATTCGTTCAATGAATTATAAAATATATGTTAGATACAAAATTAATAGCATTTAAAAAAAAAAAAAAGACATTAGAGTTGGTTTTTTTTTTTTTTTTGAAATTTGTGAATTTTGACAGAGTTATTTAATAATCTATTTTGTGCAATGATTAAACTTAATTTTGTGCAATTCTTAATTTTATTGAAATTAGTGAGTTTTTAGAGACTTTTACATTGTTTTATGTTAAAATTAGTAGGTGAATTAGCAGAAATTGAATCAAGGTAAAAATTGCAATATTTATCTCAATCTAAAGTTCAATTTAATGAAATTAAAAATTTATTGTGAAAATTAATAAATCTTGTCAAGTTTGGGGTAAAATATGAATTTTTCCATTTTTTTCCTTATTAAATGTAAAAAACATGATAAGGTAAAAATTAATAGTCAATATTTTCTAATGAAGTAATATCCCATTAAAAAAAAATTACTCTTACTTTCACATCTATTCTATTTTAGTTTCAAACTAACCTTTTTAATTCTCACCTAAGTTTTTTTAACATTAAGTGATCTTTTTTTTTTTTTTTTTTGTAATAAATCAAGGTATCGGTGGACTCTACTCATTGCATTAGAAGAAATAGAAATATTTTAATCACTGAACTATGCAAACATGAATATTTTAATTTAATTAACAAAATGAAATTAATGTTAATATTTTGTTAATAAATTTTAACGTTTGATACATGTGGGCAGCTGGTTAGGTTCTACACGAGGATTGGGTTCAAGAGTGTGCATGAATTGAGTGGTTCAAAGGTAGGAGACATTGGGGACATGTTGGTGTGGGGAGGGGTAGGGACTAGAATGGATGCAAACATTGAAGGGCTTCTACTTAAATGGTGCACTAGGTTCAAATCCCCCATCACACCTAACTCTTTGGTTCAAAAGTCGCCCTCCTCAACCACATGAGGGCTTTCCCTTGTCTTCTATTTTTGATTCAACCGGTGGCAGACACCAACTTATGATATACACATTTTGTTAGTTTATAAGTAATATGTATCATACGAATAGTTTGAGTTTACACTTACGATGTGTTTTATGAGTTAGGTTAACAGACGTTTTGAATCTTTCCAATTATTTAAAGGGCTAACTAGTTAAATGGTGCTATCGATTTAGGTTGAGTTGAAGGTAGGAATCTTGTTGTGTCTTTTTTAAACGCCCATGTATTAAACTTTTATCTAAAAAAAGTATCTTGTTATAAACTATCCATTTACTTTTCAATGAGAAATTGATATAATGCAGGAGATGTTATGCTTTAGTGCGATATTAATAGTGTTAATGACATGCATTAGATTGAAACATAGTTTAAAGTTCAAAGACGTAATTGTACTTTTTTTAAGGTTTAGAGACTAAATAAATGACAAAATGCTTAAAGTAAATCGAATAATTTTATAATTGAACTTACTATATATAAATGGCGGTGGTGGTGTTATAGAGGATTTTTTCTTCCCTTCCACTCTTCATATAGTTCATATTTTTCTAAAATTAACGATGATCATTTTTTTAATAAAATATTTTTTTTTGGAAGAAAAATAAAAAATATTATATAGTATATAAAACTATATATTTTAATTTTTTTTTAGATATTTTAATATTTAACTTCATTTTTTAGAATTAGATAAACTTTTTGATTTTCTAACAAGTCATCTATATAATTGTAATAATGTCAACAAATTGTATTTTCTAATATACAATTGCAAGATGAAGCACGATATATGATACCCATATATTTTGATTTTTTAATTTTAGATGACAACTTCTTTTTTATTTTAATATTTAATTTTTTTTATAATTATATAATAATATAAGTAAGTTTAGACTATCTTAAATGATTATAGAGAGAATTTATTTAGTTTTTTTTTTTTTTGACAAAGGAGAGAATTTCATTAGTTAATAATCTATTTAGTGTATAAATAAACTTTAATATAAAATTAAACCGTATTCTAATTTTTAGACATTTTCATCATTAACATATAAAATTTATCAAACTTCATTTTCACATATTATCAAATAAAAAATAAAAAAAAAACTAAGACTACATATATTATATGGTTCCTAATTTTTTAGGTTTTTTCAAATTTGGTTCTTAATATTTGAAAATTCTCAATTTTACTCTTAATGTATTAAAAATTCTCAATTAAGTCTTTACGTAAAAAAAAATGTTAAAATTTGTTAATAGAAAGTTGACGTGTCATTAAATTATTGTTTTGTTAATATATTTGGACACATAATTATACCACTTGAATATGTCACTTGGAAGAAATGAATTTTGTTAATGATAGGTTAGATTTTGTTGATGAGCTAGTTGAGTTTCATGTGTCAAGTAACATTCGAGTGACACATTCATGTGTTCAAATATGTTAATAAAACAATAATTTGATGATAAATCAAATTTTTGTTAACAAATTTTAACAATTTCTTTATGGAATGACATAATTGAAAATTTTTCTATACATTTAGAGTAAAATTGAAAATTTTAAAAGATTAAAGACCAAATTAAAAATTACCTTAAAGATTAAGGACCATTTGATATATTTAGCGAAAAACTAATTTACTTAAAAATTAATAAGTGGGAATTAAAATAATGGTTTAAATATTATGTTAGTCTCTGTACTTTGAACTTTTGTTCATTTTAGTTCTTGTACTTTCAAAATATTTATTTTTGGTCCCTGTACTTTGAGCTTTTATTCATTTTGGTCTTTTTACTTTCAAAATATTCATTTTTGGTTCCTGTACTATCAGGTTTTGTCCACTTTAGACCCTATACTTTCAAGAGATTTACCATTTTGGTTCTTTGATTTTCCTTTTTATCTCATTTTTTTCAATCACATTTTTAGCACAATAATACATTCAGTAAATTTCTTGAAATATTATCATATTTTTGTATTAAAAAGTTGTCGTTGAGTATAGAATTTGTATTAGAATTTATTAAATATGGATCAAAACGATTATTTTTTAAAAGTACATGGATTAAAATGGATGTTTTGAAAGTAGAAGGACTAAAATAGACAAAAACTGAAAGCACATTAACCAAAAATGAATATTTTAAAAATATAAGGACTAAAATAAACAAAAACTCAAAATATATGGACTAAAATAGTATTTAAACCTAAAATAATTTACCATTGAAAAACAAATAAGAAAAATTTAGAAATGCAGCAATATGCAATCCCAGGATTACGATTTACGATATATCACTTCACCTTCCAGCGAGACGAAGCCCTAACTTCCCACCACTCTCTGTTTCACTTTCTTCCTCTTTTTCTTTGACGAAGAACAGGACGAAGCAAATGTCACGTCGGGAAGCTCGGGAATCCGACTCCAAGCGCTACCGGTCCAGATTCGATAGAGAACCCAGGTACCCTCGTCTCCTTTTCCGATTGCGTCCCCGCATCTAAGTGTCTCTGAGTTTATTGATTGATGGAGAATGTGTTCGAGTTGAATAGATCATCGTTGCGTCAACTTCCGTTAAGATTTCGGGTAACCATGATTTGGCGCCAATATGCCTGCGTGCCAGCGTGTGTGAAAATTTGTGGATGATGTTTGTTTTGATGTTATCGTAATTGGAAGGGACACTGTTCATTAAGCGTTCTACTTCGTTTTCGATTATGGGCTTTCATTTTTTCTTTTAAAAGGAAATTTGTTTAATTTGATTGTCTTTTGTACCCACTTGGATTGATATGATATGTTTAAATGGGTCTCAAGGAATTTGCTTTTATGTAGCTCTTTTGTATGGTAGGACGAACTAGTTCATTAGTTTTGGAGTTTTTTTTCTTAAGGTGGAATTATCATCCAACAAATTTTCACCGTATGTTGATTGGTTTGTCTTTGAGGCCTTGCTCCATTAGTTTGTCACTAATGATGTGAGAGAGAAAATTTGTAATTGAAGTGCTTACATGTAATTTGAAGTGCTTGGACTCTGAAGTGTATGCTAATGTGTACTTGAAACTTAGAGTTAGTTATGTTTACCTGGGGTTGATTGTTGAGTGTATGGATAGAAATGGTACTGTGGCCAATCAATTTTGGAATACACATTACTTTAATAGTTTCTTTTATTTTACCGCAATAGCCATTATTAAGTGGAGAAGATCTGCATTATTCTGAGAAACTGGTTACTTGATTTTCATCCCATAGATATATTTCTAGCTCCTAGCTACAAAGAATATGTATTTTGCTTGTTATCAAATAAATGGCTGGACAGTTGCTTTTCCGACGCTCAGTCTCATTGTTGCATATGTGTATCATTTCTATGTTCGATTTACTTCATAGTTTTTGATGGCTACTTGGTGACATATCTGATGACTATCAACCCTGTATCATAGAAATTAATTTTCCTTTAGTTCCAAAATGGCCTAAACAAATATTATGTTTCACTTTCTCACTTAGTCAAAAGTGAGGCTCTGAAAAGAAATACATGACCTTATATGGATATTGTGGCAATAGGATGGCTCCATTCTTTTTCTTCCAATTGAATTCGATGGAGTACTTTATATAGAATAAGTGATGCATCTAAGTATCATGTGACAGTGAATCATGGAACTCTAATATGACTTAAATTTGTGACTTATTGATCCTAGTCCCAAGAGGTCTAGGAGGGACAGGAAACCATTAGACGATAAGTTATCCAGAAACTCGGACAGGAAACCATTAGATGAGAAGCTATCCAGAGACTCGGACAGGAAACCATTAGACGAGAAGCTATCCAGGGACTCGGACAGGAAACCATTAGATGAGAAGTTATCCAGAAACTCTAGTTCTCATGTTGAAGATAATAAAGATCGGGATCAGAAGCATGAGCTTTGTCACAGGGGGCAAGATATGATACCCCATGAGTCTTCATTAACACTCGATTCTAAGCCAGAAGGTGGGGTTGTTAGCAAAGAAGCAAACAGGAACAGCGATGGGAGGGATGGAGGGACTAAACATTCATTGAATCCCACTGAAGTACCACGATCACGATCTTATTTTCAGGTCTGCTCTATGTTAAAGCATTTTTCCAATTAATTTTGATAATTTGTTTTCTATTTCGTTTTTTCTCCAAAGAAAATTAATGTGATTCTAGTTTGGTTTTGCCCTTGTCCGCTATGGAACAAATTTTTATTATTTAATCTGAAGAATTGTTGACAGCATCTTAAATCTCATTATTGGTATGCTTCACGATTCTTTATTCTGCATCCATATCCCCAAACCTTTTTGGTTTAGACTCAGATTGTTTGTTGGGTGGCAAAGAATAAGGTTGGAAGCATCAAAAGTTATGTATTTTTATGTTCGAATTTAATTGTAATTGATATTATTCTTTGCTACTTTTTACATAAACTGTCGAAGTGGGACTGCTGCAAGACATGAGCATAACAATTATGTGATTTAGTCTCCTTAGAGCTATTGTTCTACCTACTCAGATAGAAATGAATTTGTGTTGGAGTTTTTCTTTGAATTGTATGAAATTCATGACCTACATTATATTTCATTCAAATATGCAGGATACAAAGGTAGTTGTAATCGATGTTTATTGAAGCACATTGATGCACGATAGTCTTGATAGTCTTGTGGGGCTTAAGTGCAAAATGTAGAAAAACACAGCCAGAGGAAGTATGATATAATGAAAAAATTTAAGAAATGAAGGTTTTCTTTAAGAGGTTGTTTAAAGAAATAGGCATCCCAGCCATAAAAGGCATTTTCTTCCTTAAAAGAACTGATAAATTAAAAAAAAACCCTAGGCATACACTGCAACGTGGGTCTCCTCAGTTGGTGTAAGGCGAGGTGCCCCAGTGGCACTCAAAACCGATGAGTGCTTTTTAAAACTATGGTTGTAACATGCTTTTATGGCTTATGAAGGATATGTTTGCACAGTCAAACAAACCTTAATATCTTTTTGAGATCTTATATTTAGGTAGCTGTGGACTTTCATCATCCACATTAATAAAATTTAAATAGCTTAGCTCAGTAATAATTCCACCCCCCCCCCCCCCCCCCCCCCCAAACTTTTTCCATTTTAATTATTTGTTGCAATTTAGACTACAAAACCTTTTTGCTGGGCTGATGTAATTGGAATCTTGTTCAGCCCTGTGCCTTCAAGTGCATCCGTGTATATAACCTCTTAGGCTTGCCTGTGCATGTCTTATAACAGCACGACGAACGTGGTAATGCCGGGCAAGTTGGTCGAAGTTTTGGTTGGAGTGCAACTAGTGGTGAGTTTCCTCACTTCCTTTTAAACCTGATTCCAGCTTTTTCAAATTCTTTTCATTTTTCCTCTTGTGCAACACCATGAGTATATAGCAGTGCACAAAGTAGACACTGTCTAGTCCTTGTAACATCACTAATCATCGCTATTAAGCATGCATTATTTTTTTCTTCCTTTTTTATATATTGACTCTCATAATTTCTTTAGCTATTTTGAGTAGTTAATAAATACTATTAACATATAATACACGGTTCTGGTTTTTTTTTAGAGCGTGGGTGGTGGAAGGATTCAAAGGATCAGGATAACGATAGGGCATCTGGAAAGACAGCAACTTATAATTCACAGCAAAGAGATGAGATACCACAAACCATGAGGGAGGATAATCACACGAGGCACCGTGATGCGTCCTCGAAATTGGAGGTCGATGCACCAGCTCCTGCTAGGAAAAGACCTGCATTTAGGGAGAAGAAGATTACAGTAGACTCTGTAAATGTTGAGAAAGCGGCTATGGCATCGGAGAGTAAGAAATCAAGTGATCCACATCATCCTCAAGATGGAAGGGAATGGAGAGAAGGAAGAGGCCGTGATACCCGTTATTCTGAGAAACTTTATAAGCATGTCACTGGAGACATGGCTACCAAAAGGGATGAGATAAAGAGAGGTGGCTACCCAGTGAGAGAAAGGTATGGCAATGGAGGTGGTAGTGGTGGAAATTACAGGGGAAGAGACAGATTCGGTGGGAGGCAAGGATATCGAGCTGGTGGTACCCGTGTAGAGAAATGGAAGCACGATCTGTTTCACGAGGCTAACCGGAGTCCAACACCGAAGAATGAAGAGGACCAAATTGCCAAGGTTGAAGCGCTCCTTGCTTCTTAG
mRNA sequence
ATGTCAATCACTACCTTCAAACTCCCGCCATTGATGGAGTTCACACAGTTGATTTCCCGAATCACCGAAACCTTCTCGCCAATTCAAAGAAACTCAAGTAAAATCCTCGCCTCTTCCTCATCCAAATGCCCTAATTCCCAATTACCAGTTCCATCAAATTCGCCCAAACCATCGAAATCCCTACAGCGAAGCACTCCAAGAGACGAAAACAAGAGCAGATTCAGAGAAGAAAACATACCGACGATGTCTGAGATTCTCGCGGCTGGCAAGGCCCAGAATCTGGACCTCCGGCTTCAAACGTTGGGGCCGTTCTTCAGAATCACGGCGAAAAGCTTGGAATCGCAGCAGGAGGTTGGGAAGGCAGAGGGATTGGTTAGAGTGTGGTTGGGAGGGAGGATTCTTCATCTGGATTCGATCCGATTGAGCAGAGAGAGCTTGGGAATGGAGAAGTCGATCTTCGGACTCGGATTGTTCATTGGCGCTGTTGCGATTCGATATGGGTTCGATTGTGGATGCAAGACGGCTGAGTTATTGGCGATCAACGACTCGGATCTTTACCATTCCAAGCTGGTTAGGTTCTACACGAGGATTGGGTTCAAGAGTGTGCATGAATTGAGTGGTTCAAAGGTAGGAGACATTGGGGACATGTTGGTGTGGGGAGGGGTAGGGACTAGAATGGATGCAAACATTGAAGGGCTTCTACTTAAATGGACGAAGCAAATGTCACGTCGGGAAGCTCGGGAATCCGACTCCAAGCGCTACCGGTCCAGATTCGATAGAGAACCCAGTCCCAAGAGGTCTAGGAGGGACAGGAAACCATTAGACGATAAGTTATCCAGAAACTCGGACAGGAAACCATTAGATGAGAAGCTATCCAGAGACTCGGACAGGAAACCATTAGACGAGAAGCTATCCAGGGACTCGGACAGGAAACCATTAGATGAGAAGTTATCCAGAAACTCTAGTTCTCATGTTGAAGATAATAAAGATCGGGATCAGAAGCATGAGCTTTGTCACAGGGGGCAAGATATGATACCCCATGAGTCTTCATTAACACTCGATTCTAAGCCAGAAGGTGGGGTTGTTAGCAAAGAAGCAAACAGGAACAGCGATGGGAGGGATGGAGGGACTAAACATTCATTGAATCCCACTGAAGTACCACGATCACGATCTTATTTTCAGCACGACGAACGTGGTAATGCCGGGCAAGTTGGTCGAAGTTTTGGTTGGAGTGCAACTAGTGAGCGTGGGTGGTGGAAGGATTCAAAGGATCAGGATAACGATAGGGCATCTGGAAAGACAGCAACTTATAATTCACAGCAAAGAGATGAGATACCACAAACCATGAGGGAGGATAATCACACGAGGCACCGTGATGCGTCCTCGAAATTGGAGGTCGATGCACCAGCTCCTGCTAGGAAAAGACCTGCATTTAGGGAGAAGAAGATTACAGTAGACTCTGTAAATGTTGAGAAAGCGGCTATGGCATCGGAGAGTAAGAAATCAAGTGATCCACATCATCCTCAAGATGGAAGGGAATGGAGAGAAGGAAGAGGCCGTGATACCCGTTATTCTGAGAAACTTTATAAGCATGTCACTGGAGACATGGCTACCAAAAGGGATGAGATAAAGAGAGGTGGCTACCCAGTGAGAGAAAGGTATGGCAATGGAGGTGGTAGTGGTGGAAATTACAGGGGAAGAGACAGATTCGGTGGGAGGCAAGGATATCGAGCTGGTGGTACCCGTGTAGAGAAATGGAAGCACGATCTGTTTCACGAGGCTAACCGGAGTCCAACACCGAAGAATGAAGAGGACCAAATTGCCAAGGTTGAAGCGCTCCTTGCTTCTTAG
Coding sequence (CDS)
ATGTCAATCACTACCTTCAAACTCCCGCCATTGATGGAGTTCACACAGTTGATTTCCCGAATCACCGAAACCTTCTCGCCAATTCAAAGAAACTCAAGTAAAATCCTCGCCTCTTCCTCATCCAAATGCCCTAATTCCCAATTACCAGTTCCATCAAATTCGCCCAAACCATCGAAATCCCTACAGCGAAGCACTCCAAGAGACGAAAACAAGAGCAGATTCAGAGAAGAAAACATACCGACGATGTCTGAGATTCTCGCGGCTGGCAAGGCCCAGAATCTGGACCTCCGGCTTCAAACGTTGGGGCCGTTCTTCAGAATCACGGCGAAAAGCTTGGAATCGCAGCAGGAGGTTGGGAAGGCAGAGGGATTGGTTAGAGTGTGGTTGGGAGGGAGGATTCTTCATCTGGATTCGATCCGATTGAGCAGAGAGAGCTTGGGAATGGAGAAGTCGATCTTCGGACTCGGATTGTTCATTGGCGCTGTTGCGATTCGATATGGGTTCGATTGTGGATGCAAGACGGCTGAGTTATTGGCGATCAACGACTCGGATCTTTACCATTCCAAGCTGGTTAGGTTCTACACGAGGATTGGGTTCAAGAGTGTGCATGAATTGAGTGGTTCAAAGGTAGGAGACATTGGGGACATGTTGGTGTGGGGAGGGGTAGGGACTAGAATGGATGCAAACATTGAAGGGCTTCTACTTAAATGGACGAAGCAAATGTCACGTCGGGAAGCTCGGGAATCCGACTCCAAGCGCTACCGGTCCAGATTCGATAGAGAACCCAGTCCCAAGAGGTCTAGGAGGGACAGGAAACCATTAGACGATAAGTTATCCAGAAACTCGGACAGGAAACCATTAGATGAGAAGCTATCCAGAGACTCGGACAGGAAACCATTAGACGAGAAGCTATCCAGGGACTCGGACAGGAAACCATTAGATGAGAAGTTATCCAGAAACTCTAGTTCTCATGTTGAAGATAATAAAGATCGGGATCAGAAGCATGAGCTTTGTCACAGGGGGCAAGATATGATACCCCATGAGTCTTCATTAACACTCGATTCTAAGCCAGAAGGTGGGGTTGTTAGCAAAGAAGCAAACAGGAACAGCGATGGGAGGGATGGAGGGACTAAACATTCATTGAATCCCACTGAAGTACCACGATCACGATCTTATTTTCAGCACGACGAACGTGGTAATGCCGGGCAAGTTGGTCGAAGTTTTGGTTGGAGTGCAACTAGTGAGCGTGGGTGGTGGAAGGATTCAAAGGATCAGGATAACGATAGGGCATCTGGAAAGACAGCAACTTATAATTCACAGCAAAGAGATGAGATACCACAAACCATGAGGGAGGATAATCACACGAGGCACCGTGATGCGTCCTCGAAATTGGAGGTCGATGCACCAGCTCCTGCTAGGAAAAGACCTGCATTTAGGGAGAAGAAGATTACAGTAGACTCTGTAAATGTTGAGAAAGCGGCTATGGCATCGGAGAGTAAGAAATCAAGTGATCCACATCATCCTCAAGATGGAAGGGAATGGAGAGAAGGAAGAGGCCGTGATACCCGTTATTCTGAGAAACTTTATAAGCATGTCACTGGAGACATGGCTACCAAAAGGGATGAGATAAAGAGAGGTGGCTACCCAGTGAGAGAAAGGTATGGCAATGGAGGTGGTAGTGGTGGAAATTACAGGGGAAGAGACAGATTCGGTGGGAGGCAAGGATATCGAGCTGGTGGTACCCGTGTAGAGAAATGGAAGCACGATCTGTTTCACGAGGCTAACCGGAGTCCAACACCGAAGAATGAAGAGGACCAAATTGCCAAGGTTGAAGCGCTCCTTGCTTCTTAG
Protein sequence
MSITTFKLPPLMEFTQLISRITETFSPIQRNSSKILASSSSKCPNSQLPVPSNSPKPSKSLQRSTPRDENKSRFREENIPTMSEILAAGKAQNLDLRLQTLGPFFRITAKSLESQQEVGKAEGLVRVWLGGRILHLDSIRLSRESLGMEKSIFGLGLFIGAVAIRYGFDCGCKTAELLAINDSDLYHSKLVRFYTRIGFKSVHELSGSKVGDIGDMLVWGGVGTRMDANIEGLLLKWTKQMSRREARESDSKRYRSRFDREPSPKRSRRDRKPLDDKLSRNSDRKPLDEKLSRDSDRKPLDEKLSRDSDRKPLDEKLSRNSSSHVEDNKDRDQKHELCHRGQDMIPHESSLTLDSKPEGGVVSKEANRNSDGRDGGTKHSLNPTEVPRSRSYFQHDERGNAGQVGRSFGWSATSERGWWKDSKDQDNDRASGKTATYNSQQRDEIPQTMREDNHTRHRDASSKLEVDAPAPARKRPAFREKKITVDSVNVEKAAMASESKKSSDPHHPQDGREWREGRGRDTRYSEKLYKHVTGDMATKRDEIKRGGYPVRERYGNGGGSGGNYRGRDRFGGRQGYRAGGTRVEKWKHDLFHEANRSPTPKNEEDQIAKVEALLAS
Homology
BLAST of Sgr029896.1 vs. NCBI nr
Match:
KAG6576912.1 (hypothetical protein SDJN03_24486, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 630.2 bits (1624), Expect = 1.9e-176
Identity = 365/528 (69.13%), Postives = 396/528 (75.00%), Query Frame = 0
Query: 1 MSITTFKLPPLMEFTQLISRITETFSPIQRNSSK--ILASSSSKCPNSQLPVPSNSPKPS 60
MSIT FKLPP ME T I I + FSPI R +K + +SSSSK PN QLP+PS SPKP
Sbjct: 1 MSITAFKLPPSMELTVPIPLIPQNFSPIHRALTKFHVTSSSSSKSPNFQLPLPSKSPKPP 60
Query: 61 KSLQRSTPRDENKSRFREENIPTMSEILAAGKAQNLDLRLQTLGPFFRITAKSLESQQEV 120
K+L R E PTM+EILAAG+AQN+ LRLQTLGPFFRITAKSLESQ+E+
Sbjct: 61 KALIDP----------RGEEFPTMAEILAAGEAQNISLRLQTLGPFFRITAKSLESQREI 120
Query: 121 GKAEGLVRVWLGGRILHLDSIRLSRESLGMEKSIFGLGLFIGAVAIRYGFDCGCKTAELL 180
GKAEGL+RVWL GRILHLDSIRL RESLGMEKSIFGLGLFIGAVAIRYG+DCGC+TAELL
Sbjct: 121 GKAEGLIRVWLRGRILHLDSIRLKRESLGMEKSIFGLGLFIGAVAIRYGYDCGCRTAELL 180
Query: 181 AINDSDLYHSKLVRFYTRIGFKSVHELSGSKVGDIGDMLVWGGVGTRMDANIEGLLLKW- 240
AINDSDLYHSKLVRFYTRIGFKSV+E+SGSKVGDIGDMLVWGGVGTRMDA IE LLLKW
Sbjct: 181 AINDSDLYHSKLVRFYTRIGFKSVYEVSGSKVGDIGDMLVWGGVGTRMDAPIEALLLKWC 240
Query: 241 ------TKQMSRREARESDSKRYRSRFDREPSPKRSRRDRKPLDDKLSRNSDRKPLDEKL 300
KQMSRRE R+SDS +RSRFD E SPKRSRR
Sbjct: 241 SREENGAKQMSRREIRKSDSNLHRSRFDGESSPKRSRR---------------------- 300
Query: 301 SRDSDRKPLDEKLSRDSDRKPLDEKLSRNSSSHVEDNKDRDQKHELCHRGQDMIPHESSL 360
DRK L+EKLSRNSSSHVEDNKDRDQKH L H GQDMIPHE S
Sbjct: 301 -----------------DRKTLEEKLSRNSSSHVEDNKDRDQKHGLQHEGQDMIPHECSS 360
Query: 361 TLDSKPEGGVVSKEANRNSDGRDGGTKHSLNPTEVPRSRSYFQHDERGNAGQV----GRS 420
LDSKPE G VSK NRNSD RDGGTKHS+NPTEVPRSRSYFQHD+RGN GQV GRS
Sbjct: 361 ALDSKPEYG-VSKGENRNSDRRDGGTKHSMNPTEVPRSRSYFQHDKRGNDGQVGRSFGRS 420
Query: 421 FGWSATSERGWWKDS--KDQDNDRASGKTATYNSQQRDEIPQTMREDNHTRHRDASSKLE 480
FG SAT ERGWWKDS K++DNDRASGK YNSQQRDE+PQ +R+D+ HRD S KLE
Sbjct: 421 FGRSATRERGWWKDSREKEKDNDRASGKGTAYNSQQRDEMPQAVRDDS---HRDESWKLE 475
Query: 481 VDAPAPARKRPAFREKKITVDSVNVEKAAMASESKKSSDPHHPQDGRE 514
DAP ARKRPAF EKKITV + + EKAAM SE +KSSDPH P+DGRE
Sbjct: 481 DDAPTSARKRPAFSEKKITVGNESGEKAAMVSEIQKSSDPHQPRDGRE 475
BLAST of Sgr029896.1 vs. NCBI nr
Match:
XP_023548006.1 (pre-mRNA-splicing factor CWC25-like [Cucurbita pepo subsp. pepo] >XP_023548014.1 pre-mRNA-splicing factor CWC25-like [Cucurbita pepo subsp. pepo])
HSP 1 Score: 522.7 bits (1345), Expect = 4.3e-144
Identity = 294/379 (77.57%), Postives = 311/379 (82.06%), Query Frame = 0
Query: 241 MSRREARESDSKRYRSRFDREPSPKRSRRDRKPLDDKLSRNSDRKPLDEKLSRDSDRKPL 300
MSRREARESDSKRYRSRFDREPSPKRSRR
Sbjct: 1 MSRREARESDSKRYRSRFDREPSPKRSRR------------------------------- 60
Query: 301 DEKLSRDSDRKPLDEKLSRNSSSHVEDNKDRDQKHELCHRGQDMIPHESSLTLDSKPEGG 360
DRKPL+EKLSRNSSSHVEDNKDRDQKHEL H GQD+ PHESSL LDS PEGG
Sbjct: 61 --------DRKPLEEKLSRNSSSHVEDNKDRDQKHELRHEGQDVTPHESSLALDSHPEGG 120
Query: 361 VVSKEANRNSDGRDGGTKHSLNPTEVPRSRSYFQHDERGNAGQVGRSFGWSATSERGWWK 420
VSK ANRNSD R+GGTK SLNPTEVPRSRSYFQHD+RG+AGQVGRSFG S++S RGWWK
Sbjct: 121 -VSKGANRNSDEREGGTKRSLNPTEVPRSRSYFQHDKRGSAGQVGRSFGRSSSSGRGWWK 180
Query: 421 DSKDQD--NDRASGKTATYNSQQRDEIPQTMREDNHTRHRDASSKLEVDAPAPARKRPAF 480
DSK+QD +DRASGKTATYNSQ+RDEIPQT++EDNHTR RD SSKLEVD+ APARKRPAF
Sbjct: 181 DSKEQDKNSDRASGKTATYNSQRRDEIPQTVKEDNHTRTRDGSSKLEVDSSAPARKRPAF 240
Query: 481 REKKITVDSVNVEKAAMASESKKSSDPHHPQDGREWREGRGRDTRYSEKLYKHVTGDMAT 540
REKKIT D+ N EKA MASESKK SDPH PQDGRE RE RGRDTRYS+KL KHVTGDMA+
Sbjct: 241 REKKITPDNENFEKAGMASESKKLSDPHQPQDGRERREERGRDTRYSDKLSKHVTGDMAS 300
Query: 541 KRDEIKRGGYPVRERYGNGGGSGGNYRGRDRFGGRQGYRA-GGTRVEKWKHDLFHEANRS 600
KRDE+KRGGY VRERYGNGGG GGNYRGRDRFGGRQGY A GGTRVEKWKHDLFHEANRS
Sbjct: 301 KRDEMKRGGYSVRERYGNGGG-GGNYRGRDRFGGRQGYPASGGTRVEKWKHDLFHEANRS 338
Query: 601 PTPKNEEDQIAKVEALLAS 617
PTPKNEEDQIAKVEALLAS
Sbjct: 361 PTPKNEEDQIAKVEALLAS 338
BLAST of Sgr029896.1 vs. NCBI nr
Match:
XP_022942670.1 (pre-mRNA-splicing factor CWC25-like isoform X1 [Cucurbita moschata] >XP_022942671.1 pre-mRNA-splicing factor CWC25-like isoform X1 [Cucurbita moschata])
HSP 1 Score: 521.2 bits (1341), Expect = 1.2e-143
Identity = 293/379 (77.31%), Postives = 310/379 (81.79%), Query Frame = 0
Query: 241 MSRREARESDSKRYRSRFDREPSPKRSRRDRKPLDDKLSRNSDRKPLDEKLSRDSDRKPL 300
MSRREARESDSKRYRSRFD+EPSPKRSRR
Sbjct: 1 MSRREARESDSKRYRSRFDKEPSPKRSRR------------------------------- 60
Query: 301 DEKLSRDSDRKPLDEKLSRNSSSHVEDNKDRDQKHELCHRGQDMIPHESSLTLDSKPEGG 360
DRKPL+EKLSRNSSSHVEDNKDRDQKHEL H GQD PHESSL LDS PEGG
Sbjct: 61 --------DRKPLEEKLSRNSSSHVEDNKDRDQKHELRHEGQDATPHESSLALDSHPEGG 120
Query: 361 VVSKEANRNSDGRDGGTKHSLNPTEVPRSRSYFQHDERGNAGQVGRSFGWSATSERGWWK 420
VSK ANRNSD R+GGTK SLNPTEVPRSRSYFQHD+RG+AGQVGRSFG S++S RGWWK
Sbjct: 121 -VSKGANRNSDEREGGTKRSLNPTEVPRSRSYFQHDKRGSAGQVGRSFGRSSSSGRGWWK 180
Query: 421 DSKDQD--NDRASGKTATYNSQQRDEIPQTMREDNHTRHRDASSKLEVDAPAPARKRPAF 480
DSK+QD +DRASGKTATYNSQ+RDEIPQT++EDNHTR RD SSKLEVD+ APARKRPAF
Sbjct: 181 DSKEQDKNSDRASGKTATYNSQRRDEIPQTVKEDNHTRTRDGSSKLEVDSSAPARKRPAF 240
Query: 481 REKKITVDSVNVEKAAMASESKKSSDPHHPQDGREWREGRGRDTRYSEKLYKHVTGDMAT 540
REKKIT D+ N EKA MASESKK SDPH PQDGRE RE RGRDTRYS+KL KHVTGDMA+
Sbjct: 241 REKKITPDNENFEKAGMASESKKPSDPHQPQDGRERREERGRDTRYSDKLSKHVTGDMAS 300
Query: 541 KRDEIKRGGYPVRERYGNGGGSGGNYRGRDRFGGRQGYRA-GGTRVEKWKHDLFHEANRS 600
KRDE+KRGGY VRERYGNGGG GGNYRGRDRFGGRQGY A GGTRVEKWKHDLFHEANRS
Sbjct: 301 KRDEMKRGGYSVRERYGNGGG-GGNYRGRDRFGGRQGYPASGGTRVEKWKHDLFHEANRS 338
Query: 601 PTPKNEEDQIAKVEALLAS 617
PTPKNEEDQIAKVEALLAS
Sbjct: 361 PTPKNEEDQIAKVEALLAS 338
BLAST of Sgr029896.1 vs. NCBI nr
Match:
KAG6600285.1 (hypothetical protein SDJN03_05518, partial [Cucurbita argyrosperma subsp. sororia] >KAG7030943.1 hypothetical protein SDJN02_04980 [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 519.6 bits (1337), Expect = 3.6e-143
Identity = 292/379 (77.04%), Postives = 309/379 (81.53%), Query Frame = 0
Query: 241 MSRREARESDSKRYRSRFDREPSPKRSRRDRKPLDDKLSRNSDRKPLDEKLSRDSDRKPL 300
MSRREARESDSKRYRSRFD+EPSPKRSRR
Sbjct: 1 MSRREARESDSKRYRSRFDKEPSPKRSRR------------------------------- 60
Query: 301 DEKLSRDSDRKPLDEKLSRNSSSHVEDNKDRDQKHELCHRGQDMIPHESSLTLDSKPEGG 360
DRKPL+EKLSRNSSSHVEDNKDRDQKHEL H GQD PHESSL LDS PEGG
Sbjct: 61 --------DRKPLEEKLSRNSSSHVEDNKDRDQKHELRHEGQDATPHESSLALDSHPEGG 120
Query: 361 VVSKEANRNSDGRDGGTKHSLNPTEVPRSRSYFQHDERGNAGQVGRSFGWSATSERGWWK 420
VSK ANRNSD R+GGTK SLNPTE PRSRSYFQHD+RG+AGQVGRSFG S++S RGWWK
Sbjct: 121 -VSKGANRNSDEREGGTKRSLNPTEAPRSRSYFQHDKRGSAGQVGRSFGRSSSSGRGWWK 180
Query: 421 DSKDQD--NDRASGKTATYNSQQRDEIPQTMREDNHTRHRDASSKLEVDAPAPARKRPAF 480
DSK+QD +DRASGKTATYNSQ+RDEIPQT++EDNHTR RD SSKLEVD+ APARKRPAF
Sbjct: 181 DSKEQDKNSDRASGKTATYNSQRRDEIPQTVKEDNHTRTRDGSSKLEVDSSAPARKRPAF 240
Query: 481 REKKITVDSVNVEKAAMASESKKSSDPHHPQDGREWREGRGRDTRYSEKLYKHVTGDMAT 540
REKKIT D+ N EKA MASESKK SDPH PQDGRE RE RGRDTRYS+KL KHVTGDMA+
Sbjct: 241 REKKITPDNENFEKAGMASESKKPSDPHQPQDGRERREERGRDTRYSDKLSKHVTGDMAS 300
Query: 541 KRDEIKRGGYPVRERYGNGGGSGGNYRGRDRFGGRQGYRA-GGTRVEKWKHDLFHEANRS 600
KRDE+KRGGY VRERYGNGGG GGNYRGRDRFGGRQGY A GGTRVEKWKHDLFHEANRS
Sbjct: 301 KRDEMKRGGYSVRERYGNGGG-GGNYRGRDRFGGRQGYPASGGTRVEKWKHDLFHEANRS 338
Query: 601 PTPKNEEDQIAKVEALLAS 617
PTPKNEEDQIAKVEALLAS
Sbjct: 361 PTPKNEEDQIAKVEALLAS 338
BLAST of Sgr029896.1 vs. NCBI nr
Match:
XP_022984546.1 (pre-mRNA-splicing factor CWC25 isoform X1 [Cucurbita maxima])
HSP 1 Score: 517.7 bits (1332), Expect = 1.4e-142
Identity = 292/379 (77.04%), Postives = 310/379 (81.79%), Query Frame = 0
Query: 241 MSRREARESDSKRYRSRFDREPSPKRSRRDRKPLDDKLSRNSDRKPLDEKLSRDSDRKPL 300
MSRREARESDSKRYRSRFDREPSPKRSRR
Sbjct: 1 MSRREARESDSKRYRSRFDREPSPKRSRR------------------------------- 60
Query: 301 DEKLSRDSDRKPLDEKLSRNSSSHVEDNKDRDQKHELCHRGQDMIPHESSLTLDSKPEGG 360
DRKPL+EKLSRNSSSHVEDNKDRDQKHEL H GQD+ PHESSL LDS PEGG
Sbjct: 61 --------DRKPLEEKLSRNSSSHVEDNKDRDQKHELRHEGQDVTPHESSLALDSHPEGG 120
Query: 361 VVSKEANRNSDGRDGGTKHSLNPTEVPRSRSYFQHDERGNAGQVGRSFGWSATSERGWWK 420
VSK ANRNSD R+GGTK +LNPTEVPRSRSYFQHD+RG+AGQVGRSFG S++S RGWWK
Sbjct: 121 -VSKGANRNSDEREGGTKRALNPTEVPRSRSYFQHDKRGSAGQVGRSFGRSSSSGRGWWK 180
Query: 421 DSKDQD--NDRASGKTATYNSQQRDEIPQTMREDNHTRHRDASSKLEVDAPAPARKRPAF 480
DSK+QD +DRASGKTATYNSQ+RDEIPQT++EDNHTR RD SSKLEVD+ APARKRPAF
Sbjct: 181 DSKEQDKNSDRASGKTATYNSQRRDEIPQTVKEDNHTRTRDGSSKLEVDSSAPARKRPAF 240
Query: 481 REKKITVDSVNVEKAAMASESKKSSDPHHPQDGREWREGRGRDTRYSEKLYKHVTGDMAT 540
REKKIT D+ N EKA MASESKK SDPH PQDGRE RE RGRDTRYS+KL KHVTGDMA+
Sbjct: 241 REKKITPDNENFEKAGMASESKKLSDPHPPQDGRERREERGRDTRYSDKLSKHVTGDMAS 300
Query: 541 KRDEIKRGGYPVRERYGNGGGSGGNYRGRDRFGGRQGYRA-GGTRVEKWKHDLFHEANRS 600
KRDE+KRGGY VRERYGNGGG GGNYRGRDRFGGRQGY A GGTRVEKWKHDLFHEANRS
Sbjct: 301 KRDEMKRGGYSVRERYGNGGG-GGNYRGRDRFGGRQGYPASGGTRVEKWKHDLFHEANRS 338
Query: 601 PTPKNEEDQIAKVEALLAS 617
PTPKNEE QIAKVEALLAS
Sbjct: 361 PTPKNEEAQIAKVEALLAS 338
BLAST of Sgr029896.1 vs. ExPASy TrEMBL
Match:
A0A6J1FPJ0 (pre-mRNA-splicing factor CWC25-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111447638 PE=4 SV=1)
HSP 1 Score: 521.2 bits (1341), Expect = 6.0e-144
Identity = 293/379 (77.31%), Postives = 310/379 (81.79%), Query Frame = 0
Query: 241 MSRREARESDSKRYRSRFDREPSPKRSRRDRKPLDDKLSRNSDRKPLDEKLSRDSDRKPL 300
MSRREARESDSKRYRSRFD+EPSPKRSRR
Sbjct: 1 MSRREARESDSKRYRSRFDKEPSPKRSRR------------------------------- 60
Query: 301 DEKLSRDSDRKPLDEKLSRNSSSHVEDNKDRDQKHELCHRGQDMIPHESSLTLDSKPEGG 360
DRKPL+EKLSRNSSSHVEDNKDRDQKHEL H GQD PHESSL LDS PEGG
Sbjct: 61 --------DRKPLEEKLSRNSSSHVEDNKDRDQKHELRHEGQDATPHESSLALDSHPEGG 120
Query: 361 VVSKEANRNSDGRDGGTKHSLNPTEVPRSRSYFQHDERGNAGQVGRSFGWSATSERGWWK 420
VSK ANRNSD R+GGTK SLNPTEVPRSRSYFQHD+RG+AGQVGRSFG S++S RGWWK
Sbjct: 121 -VSKGANRNSDEREGGTKRSLNPTEVPRSRSYFQHDKRGSAGQVGRSFGRSSSSGRGWWK 180
Query: 421 DSKDQD--NDRASGKTATYNSQQRDEIPQTMREDNHTRHRDASSKLEVDAPAPARKRPAF 480
DSK+QD +DRASGKTATYNSQ+RDEIPQT++EDNHTR RD SSKLEVD+ APARKRPAF
Sbjct: 181 DSKEQDKNSDRASGKTATYNSQRRDEIPQTVKEDNHTRTRDGSSKLEVDSSAPARKRPAF 240
Query: 481 REKKITVDSVNVEKAAMASESKKSSDPHHPQDGREWREGRGRDTRYSEKLYKHVTGDMAT 540
REKKIT D+ N EKA MASESKK SDPH PQDGRE RE RGRDTRYS+KL KHVTGDMA+
Sbjct: 241 REKKITPDNENFEKAGMASESKKPSDPHQPQDGRERREERGRDTRYSDKLSKHVTGDMAS 300
Query: 541 KRDEIKRGGYPVRERYGNGGGSGGNYRGRDRFGGRQGYRA-GGTRVEKWKHDLFHEANRS 600
KRDE+KRGGY VRERYGNGGG GGNYRGRDRFGGRQGY A GGTRVEKWKHDLFHEANRS
Sbjct: 301 KRDEMKRGGYSVRERYGNGGG-GGNYRGRDRFGGRQGYPASGGTRVEKWKHDLFHEANRS 338
Query: 601 PTPKNEEDQIAKVEALLAS 617
PTPKNEEDQIAKVEALLAS
Sbjct: 361 PTPKNEEDQIAKVEALLAS 338
BLAST of Sgr029896.1 vs. ExPASy TrEMBL
Match:
A0A6J1J5K1 (pre-mRNA-splicing factor CWC25 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111482807 PE=4 SV=1)
HSP 1 Score: 517.7 bits (1332), Expect = 6.7e-143
Identity = 292/379 (77.04%), Postives = 310/379 (81.79%), Query Frame = 0
Query: 241 MSRREARESDSKRYRSRFDREPSPKRSRRDRKPLDDKLSRNSDRKPLDEKLSRDSDRKPL 300
MSRREARESDSKRYRSRFDREPSPKRSRR
Sbjct: 1 MSRREARESDSKRYRSRFDREPSPKRSRR------------------------------- 60
Query: 301 DEKLSRDSDRKPLDEKLSRNSSSHVEDNKDRDQKHELCHRGQDMIPHESSLTLDSKPEGG 360
DRKPL+EKLSRNSSSHVEDNKDRDQKHEL H GQD+ PHESSL LDS PEGG
Sbjct: 61 --------DRKPLEEKLSRNSSSHVEDNKDRDQKHELRHEGQDVTPHESSLALDSHPEGG 120
Query: 361 VVSKEANRNSDGRDGGTKHSLNPTEVPRSRSYFQHDERGNAGQVGRSFGWSATSERGWWK 420
VSK ANRNSD R+GGTK +LNPTEVPRSRSYFQHD+RG+AGQVGRSFG S++S RGWWK
Sbjct: 121 -VSKGANRNSDEREGGTKRALNPTEVPRSRSYFQHDKRGSAGQVGRSFGRSSSSGRGWWK 180
Query: 421 DSKDQD--NDRASGKTATYNSQQRDEIPQTMREDNHTRHRDASSKLEVDAPAPARKRPAF 480
DSK+QD +DRASGKTATYNSQ+RDEIPQT++EDNHTR RD SSKLEVD+ APARKRPAF
Sbjct: 181 DSKEQDKNSDRASGKTATYNSQRRDEIPQTVKEDNHTRTRDGSSKLEVDSSAPARKRPAF 240
Query: 481 REKKITVDSVNVEKAAMASESKKSSDPHHPQDGREWREGRGRDTRYSEKLYKHVTGDMAT 540
REKKIT D+ N EKA MASESKK SDPH PQDGRE RE RGRDTRYS+KL KHVTGDMA+
Sbjct: 241 REKKITPDNENFEKAGMASESKKLSDPHPPQDGRERREERGRDTRYSDKLSKHVTGDMAS 300
Query: 541 KRDEIKRGGYPVRERYGNGGGSGGNYRGRDRFGGRQGYRA-GGTRVEKWKHDLFHEANRS 600
KRDE+KRGGY VRERYGNGGG GGNYRGRDRFGGRQGY A GGTRVEKWKHDLFHEANRS
Sbjct: 301 KRDEMKRGGYSVRERYGNGGG-GGNYRGRDRFGGRQGYPASGGTRVEKWKHDLFHEANRS 338
Query: 601 PTPKNEEDQIAKVEALLAS 617
PTPKNEE QIAKVEALLAS
Sbjct: 361 PTPKNEEAQIAKVEALLAS 338
BLAST of Sgr029896.1 vs. ExPASy TrEMBL
Match:
A0A6J1FQX4 (pre-mRNA-splicing factor CWC25-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111447638 PE=4 SV=1)
HSP 1 Score: 495.4 bits (1274), Expect = 3.6e-136
Identity = 282/379 (74.41%), Postives = 299/379 (78.89%), Query Frame = 0
Query: 241 MSRREARESDSKRYRSRFDREPSPKRSRRDRKPLDDKLSRNSDRKPLDEKLSRDSDRKPL 300
MSRREARESDSKRYRSRFD+EPSPKRSRR
Sbjct: 1 MSRREARESDSKRYRSRFDKEPSPKRSRR------------------------------- 60
Query: 301 DEKLSRDSDRKPLDEKLSRNSSSHVEDNKDRDQKHELCHRGQDMIPHESSLTLDSKPEGG 360
DRKPL+EKLSRNSSSHVEDNKDRDQKHEL H GQD PHESSL LDS PEGG
Sbjct: 61 --------DRKPLEEKLSRNSSSHVEDNKDRDQKHELRHEGQDATPHESSLALDSHPEGG 120
Query: 361 VVSKEANRNSDGRDGGTKHSLNPTEVPRSRSYFQHDERGNAGQVGRSFGWSATSERGWWK 420
VSK ANRNSD R+GGTK SLNPTEVPRSRSYFQHD+RG+AGQVGRSFG S++S RGWWK
Sbjct: 121 -VSKGANRNSDEREGGTKRSLNPTEVPRSRSYFQHDKRGSAGQVGRSFGRSSSSGRGWWK 180
Query: 421 DSKDQD--NDRASGKTATYNSQQRDEIPQTMREDNHTRHRDASSKLEVDAPAPARKRPAF 480
DSK+QD +DRASGKTATYNSQ+RDEIPQT++EDNHTR RD SSKLEVD+ APARKRPAF
Sbjct: 181 DSKEQDKNSDRASGKTATYNSQRRDEIPQTVKEDNHTRTRDGSSKLEVDSSAPARKRPAF 240
Query: 481 REKKITVDSVNVEKAAMASESKKSSDPHHPQDGREWREGRGRDTRYSEKLYKHVTGDMAT 540
REKKIT D+ N EKA MASESKK SDPH PQDGRE RE RGRDTRYS+KL KHVTGDMA+
Sbjct: 241 REKKITPDNENFEKAGMASESKKPSDPHQPQDGRERREERGRDTRYSDKLSKHVTGDMAS 300
Query: 541 KRDEIKRGGYPVRERYGNGGGSGGNYRGRDRFGGRQGYRA-GGTRVEKWKHDLFHEANRS 600
KRDE+KRGG GGNYRGRDRFGGRQGY A GGTRVEKWKHDLFHEANRS
Sbjct: 301 KRDEMKRGG-------------GGNYRGRDRFGGRQGYPASGGTRVEKWKHDLFHEANRS 326
Query: 601 PTPKNEEDQIAKVEALLAS 617
PTPKNEEDQIAKVEALLAS
Sbjct: 361 PTPKNEEDQIAKVEALLAS 326
BLAST of Sgr029896.1 vs. ExPASy TrEMBL
Match:
A0A6J1JAV5 (pre-mRNA-splicing factor CWC25 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111482807 PE=4 SV=1)
HSP 1 Score: 491.9 bits (1265), Expect = 3.9e-135
Identity = 281/379 (74.14%), Postives = 299/379 (78.89%), Query Frame = 0
Query: 241 MSRREARESDSKRYRSRFDREPSPKRSRRDRKPLDDKLSRNSDRKPLDEKLSRDSDRKPL 300
MSRREARESDSKRYRSRFDREPSPKRSRR
Sbjct: 1 MSRREARESDSKRYRSRFDREPSPKRSRR------------------------------- 60
Query: 301 DEKLSRDSDRKPLDEKLSRNSSSHVEDNKDRDQKHELCHRGQDMIPHESSLTLDSKPEGG 360
DRKPL+EKLSRNSSSHVEDNKDRDQKHEL H GQD+ PHESSL LDS PEGG
Sbjct: 61 --------DRKPLEEKLSRNSSSHVEDNKDRDQKHELRHEGQDVTPHESSLALDSHPEGG 120
Query: 361 VVSKEANRNSDGRDGGTKHSLNPTEVPRSRSYFQHDERGNAGQVGRSFGWSATSERGWWK 420
VSK ANRNSD R+GGTK +LNPTEVPRSRSYFQHD+RG+AGQVGRSFG S++S RGWWK
Sbjct: 121 -VSKGANRNSDEREGGTKRALNPTEVPRSRSYFQHDKRGSAGQVGRSFGRSSSSGRGWWK 180
Query: 421 DSKDQD--NDRASGKTATYNSQQRDEIPQTMREDNHTRHRDASSKLEVDAPAPARKRPAF 480
DSK+QD +DRASGKTATYNSQ+RDEIPQT++EDNHTR RD SSKLEVD+ APARKRPAF
Sbjct: 181 DSKEQDKNSDRASGKTATYNSQRRDEIPQTVKEDNHTRTRDGSSKLEVDSSAPARKRPAF 240
Query: 481 REKKITVDSVNVEKAAMASESKKSSDPHHPQDGREWREGRGRDTRYSEKLYKHVTGDMAT 540
REKKIT D+ N EKA MASESKK SDPH PQDGRE RE RGRDTRYS+KL KHVTGDMA+
Sbjct: 241 REKKITPDNENFEKAGMASESKKLSDPHPPQDGRERREERGRDTRYSDKLSKHVTGDMAS 300
Query: 541 KRDEIKRGGYPVRERYGNGGGSGGNYRGRDRFGGRQGYRA-GGTRVEKWKHDLFHEANRS 600
KRDE+KRGG GGNYRGRDRFGGRQGY A GGTRVEKWKHDLFHEANRS
Sbjct: 301 KRDEMKRGG-------------GGNYRGRDRFGGRQGYPASGGTRVEKWKHDLFHEANRS 326
Query: 601 PTPKNEEDQIAKVEALLAS 617
PTPKNEE QIAKVEALLAS
Sbjct: 361 PTPKNEEAQIAKVEALLAS 326
BLAST of Sgr029896.1 vs. ExPASy TrEMBL
Match:
A0A0A0KV12 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G000750 PE=4 SV=1)
HSP 1 Score: 478.4 bits (1230), Expect = 4.5e-131
Identity = 278/379 (73.35%), Postives = 294/379 (77.57%), Query Frame = 0
Query: 241 MSRREARESDSKRYRSRFDREPSPKRSRRDRKPLDDKLSRNSDRKPLDEKLSRDSDRKPL 300
MSRREARESDSKR+RSRFDREPSPKRS+R
Sbjct: 1 MSRREARESDSKRHRSRFDREPSPKRSKR------------------------------- 60
Query: 301 DEKLSRDSDRKPLDEKLSRNSSSHVEDNKDRDQKHELCHRGQDMIPHESSLTLDSKPEGG 360
DRK L+EKLSRNSSSHVEDNK+RDQKHEL GQDMIPHESSL L+SKPEGG
Sbjct: 61 --------DRKTLEEKLSRNSSSHVEDNKERDQKHELRLVGQDMIPHESSLALESKPEGG 120
Query: 361 VVSKEANRNSDGRDGGTKHSLNPTEVPRSRSYFQHDERGNAGQVGRSFGWSATSERGWWK 420
ANRNSDGRDGGTKHS+NPTEVPRSRSYFQHDER NAGQVGRSFG SATSERGWWK
Sbjct: 121 -AGIGANRNSDGRDGGTKHSVNPTEVPRSRSYFQHDERSNAGQVGRSFGRSATSERGWWK 180
Query: 421 DSK--DQDNDRASGKTATYNSQQRDEIPQTMREDNHTRHRDASSKLEVDAPAPARKRPAF 480
DSK D+D+DRASGK+ TY SQQRDE PQ RED RH D SSKLEVDA PARKRPAF
Sbjct: 181 DSKDPDKDSDRASGKSLTYKSQQRDEKPQAARED---RHHDGSSKLEVDALTPARKRPAF 240
Query: 481 REKKITVDSVNVEKAAMASESKKSSDPHHPQDGREWREGRGRDTRYSEKL-YKHVTGDMA 540
REKKITVD+ + EK AM ESKKS+D H Q+GRE RE RGRD RYSEKL KH GDMA
Sbjct: 241 REKKITVDNEDGEKVAMVPESKKSNDLHQIQEGRERREERGRDPRYSEKLNNKHSNGDMA 300
Query: 541 TKRDEIKRGGYPVRERYGNGGGSGGNYRGRDRFGGRQGYRAGGTRVEKWKHDLFHEANRS 600
+KRDE+KR GYPVRERYGNG G GGNYRGRDRFGGRQGYR GTRVEKWKHDLFHEANRS
Sbjct: 301 SKRDEMKRVGYPVRERYGNGSG-GGNYRGRDRFGGRQGYRTSGTRVEKWKHDLFHEANRS 335
Query: 601 PTPKNEEDQIAKVEALLAS 617
PTPKNEEDQIAKVEALL+S
Sbjct: 361 PTPKNEEDQIAKVEALLSS 335
BLAST of Sgr029896.1 vs. TAIR 10
Match:
AT3G19650.1 (cyclin-related )
HSP 1 Score: 124.8 bits (312), Expect = 2.4e-28
Identity = 138/380 (36.32%), Postives = 178/380 (46.84%), Query Frame = 0
Query: 242 SRREARESDSKRYRSRFDREPSPKRSRRDRKPLDDKLSRNSDRKPLDEKLSRDSDRKPLD 301
+RRE+R+SD +R+RSR DREPSPKRSRRD KP + R +K LD + D+
Sbjct: 3 TRRESRDSDPRRHRSRIDREPSPKRSRRDGKP---EAERVLSKKDLDVRDGTDT------ 62
Query: 302 EKLSRDSDRKPLDEKLSRNSSSHVEDNKDRDQKHELCHRGQDMIPHESSLTLDSKPEGGV 361
EK SR S R D L ++ KD ++KH H PH S
Sbjct: 63 EKNSRQSLR---DAPLELDAHG---SRKDSEKKHSGHHETTKAAPHLS------------ 122
Query: 362 VSKEANRNSDGRDGGTKHSLNPTEVPRSRSYFQHDERGNAGQVGRSFGWSATSERGWWKD 421
+VPRSR Y QHD+R + G+V R TS RG W+
Sbjct: 123 -----------------------QVPRSRPYSQHDDRRSDGKVDR----RPTSVRGSWRS 182
Query: 422 SKDQDNDRASGKTATYNSQQRDEIPQTMREDNHTRHRDASSKLEVDAPAPARKRPAFREK 481
S+DQ N RA + ++DE + R D D L +RKRPAFREK
Sbjct: 183 SRDQSNRRAGDDEK--SQHRKDEDKSSWRHDRFRESDDTQGAL-------SRKRPAFREK 242
Query: 482 KITVDSVNVEKAAMASESKKSSDPHHPQDGREWREGRGRDTRYSEKLYKHVTG-DMATKR 541
KI ++ N + K ++ + Q+ R W R +SE+ + G D R
Sbjct: 243 KIAEETGNNTDRTRTEDGKDTNLNNRRQNERNW-----RSNTHSERHERPAMGRDRVWNR 302
Query: 542 DEIKRGGYPVRERYGNGGGSGGNYRG-RDRF--GGRQGYRAGGTRVE-KWKHDLFHEANR 601
D+ ER G GS +Y+ RDRF GR G+ TR E KW HDLF EAN+
Sbjct: 303 DD---------ER---GAGSRQSYQADRDRFNGNGRSGFSGSWTRNEKKWDHDLFDEANK 302
Query: 602 SPTPKNEEDQIAKVEALLAS 617
SP EE+QIAKVEALLAS
Sbjct: 363 SPAKATEEEQIAKVEALLAS 302
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
KAG6576912.1 | 1.9e-176 | 69.13 | hypothetical protein SDJN03_24486, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
XP_023548006.1 | 4.3e-144 | 77.57 | pre-mRNA-splicing factor CWC25-like [Cucurbita pepo subsp. pepo] >XP_023548014.1... | [more] |
XP_022942670.1 | 1.2e-143 | 77.31 | pre-mRNA-splicing factor CWC25-like isoform X1 [Cucurbita moschata] >XP_02294267... | [more] |
KAG6600285.1 | 3.6e-143 | 77.04 | hypothetical protein SDJN03_05518, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
XP_022984546.1 | 1.4e-142 | 77.04 | pre-mRNA-splicing factor CWC25 isoform X1 [Cucurbita maxima] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1FPJ0 | 6.0e-144 | 77.31 | pre-mRNA-splicing factor CWC25-like isoform X1 OS=Cucurbita moschata OX=3662 GN=... | [more] |
A0A6J1J5K1 | 6.7e-143 | 77.04 | pre-mRNA-splicing factor CWC25 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC1114... | [more] |
A0A6J1FQX4 | 3.6e-136 | 74.41 | pre-mRNA-splicing factor CWC25-like isoform X2 OS=Cucurbita moschata OX=3662 GN=... | [more] |
A0A6J1JAV5 | 3.9e-135 | 74.14 | pre-mRNA-splicing factor CWC25 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC1114... | [more] |
A0A0A0KV12 | 4.5e-131 | 73.35 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G000750 PE=4 SV=1 | [more] |