Sgr029896 (gene) Monk fruit (Qingpiguo) v1

Overview


Name	Sgr029896
Type	gene
Organism	Siraitia grosvenorii (Monk fruit (Qingpiguo) v1)
Description	pre-mRNA-splicing factor CWC25-like isoform X2
Location	tig00153554: 916132 .. 924108 (-)
RNA-Seq Expression	Sgr029896
Synteny	Sgr029896

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCAATCACTACCTTCAAACTCCCGCCATTGATGGAGTTCACACAGTTGATTTCCCGAATCACCGAAACCTTCTCGCCAATTCAAAGAAACTCAAGTAAAATCCTCGCCTCTTCCTCATCCAAATGCCCTAATTCCCAATTACCAGTTCCATCAAATTCGCCCAAACCATCGAAATCCCTACAGCGAAGCACTCCAAGAGACGAAAACAAGAGCAGATTCAGAGAAGAAAACATACCGACGATGTCTGAGATTCTCGCGGCTGGCAAGGCCCAGAATCTGGACCTCCGGCTTCAAACGTTGGGGCCGTTCTTCAGAATCACGGCGAAAAGCTTGGAATCGCAGCAGGAGGTTGGGAAGGCAGAGGGATTGGTTAGAGTGTGGTTGGGAGGGAGGATTCTTCATCTGGATTCGATCCGATTGAGCAGAGAGAGCTTGGGAATGGAGAAGTCGATCTTCGGACTCGGATTGTTCATTGGCGCTGTTGCGATTCGATATGGGTTCGATTGTGGATGCAAGACGGCTGAGTTATTGGCGATCAACGACTCGGATCTTTACCATTCCAAGGTTGTTTTCTTCTCTCTTAGCTCTTTCTCTCGGATACAATTCAATTGAAGTAGCAAGGTTCAGTTTTTTAAGGAAATATTTTTAGGTTAGAGTTTTTAATTTAGACCTTAACCTTTTAAAAGTTTGAATTTTATTCTTTATTAAAAAAAAATCATTTTTTACCCCAAACTTAATAAGGTGTATTAATTTTTATCATAAATTTTTAATTTCATTAAATTGCACATTAAACTTAGATAAGTGTTACAATGTTTACCTTAAACATGATTAAGTATTACAATTTTTACGTTGTGATAGTTCTTCGTTTGAAGAATTGTTAAAAAAAGTATTCGTTCAATGAATTATAAAATATATGTTAGATACAAAATTAATAGCATTTAAAAAAAAAAAAAAGACATTAGAGTTGGTTTTTTTTTTTTTTTTGAAATTTGTGAATTTTGACAGAGTTATTTAATAATCTATTTTGTGCAATGATTAAACTTAATTTTGTGCAATTCTTAATTTTATTGAAATTAGTGAGTTTTTAGAGACTTTTACATTGTTTTATGTTAAAATTAGTAGGTGAATTAGCAGAAATTGAATCAAGGTAAAAATTGCAATATTTATCTCAATCTAAAGTTCAATTTAATGAAATTAAAAATTTATTGTGAAAATTAATAAATCTTGTCAAGTTTGGGGTAAAATATGAATTTTTCCATTTTTTTCCTTATTAAATGTAAAAAACATGATAAGGTAAAAATTAATAGTCAATATTTTCTAATGAAGTAATATCCCATTAAAAAAAAATTACTCTTACTTTCACATCTATTCTATTTTAGTTTCAAACTAACCTTTTTAATTCTCACCTAAGTTTTTTTAACATTAAGTGATCTTTTTTTTTTTTTTTTTTGTAATAAATCAAGGTATCGGTGGACTCTACTCATTGCATTAGAAGAAATAGAAATATTTTAATCACTGAACTATGCAAACATGAATATTTTAATTTAATTAACAAAATGAAATTAATGTTAATATTTTGTTAATAAATTTTAACGTTTGATACATGTGGGCAGCTGGTTAGGTTCTACACGAGGATTGGGTTCAAGAGTGTGCATGAATTGAGTGGTTCAAAGGTAGGAGACATTGGGGACATGTTGGTGTGGGGAGGGGTAGGGACTAGAATGGATGCAAACATTGAAGGGCTTCTACTTAAATGGTGCACTAGGTTCAAATCCCCCATCACACCTAACTCTTTGGTTCAAAAGTCGCCCTCCTCAACCACATGAGGGCTTTCCCTTGTCTTCTATTTTTGATTCAACCGGTGGCAGACACCAACTTATGATATACACATTTTGTTAGTTTATAAGTAATATGTATCATACGAATAGTTTGAGTTTACACTTACGATGTGTTTTATGAGTTAGGTTAACAGACGTTTTGAATCTTTCCAATTATTTAAAGGGCTAACTAGTTAAATGGTGCTATCGATTTAGGTTGAGTTGAAGGTAGGAATCTTGTTGTGTCTTTTTTAAACGCCCATGTATTAAACTTTTATCTAAAAAAAGTATCTTGTTATAAACTATCCATTTACTTTTCAATGAGAAATTGATATAATGCAGGAGATGTTATGCTTTAGTGCGATATTAATAGTGTTAATGACATGCATTAGATTGAAACATAGTTTAAAGTTCAAAGACGTAATTGTACTTTTTTTAAGGTTTAGAGACTAAATAAATGACAAAATGCTTAAAGTAAATCGAATAATTTTATAATTGAACTTACTATATATAAATGGCGGTGGTGGTGTTATAGAGGATTTTTTCTTCCCTTCCACTCTTCATATAGTTCATATTTTTCTAAAATTAACGATGATCATTTTTTTAATAAAATATTTTTTTTTGGAAGAAAAATAAAAAATATTATATAGTATATAAAACTATATATTTTAATTTTTTTTTAGATATTTTAATATTTAACTTCATTTTTTAGAATTAGATAAACTTTTTGATTTTCTAACAAGTCATCTATATAATTGTAATAATGTCAACAAATTGTATTTTCTAATATACAATTGCAAGATGAAGCACGATATATGATACCCATATATTTTGATTTTTTAATTTTAGATGACAACTTCTTTTTTATTTTAATATTTAATTTTTTTTATAATTATATAATAATATAAGTAAGTTTAGACTATCTTAAATGATTATAGAGAGAATTTATTTAGTTTTTTTTTTTTTTGACAAAGGAGAGAATTTCATTAGTTAATAATCTATTTAGTGTATAAATAAACTTTAATATAAAATTAAACCGTATTCTAATTTTTAGACATTTTCATCATTAACATATAAAATTTATCAAACTTCATTTTCACATATTATCAAATAAAAAATAAAAAAAAAACTAAGACTACATATATTATATGGTTCCTAATTTTTTAGGTTTTTTCAAATTTGGTTCTTAATATTTGAAAATTCTCAATTTTACTCTTAATGTATTAAAAATTCTCAATTAAGTCTTTACGTAAAAAAAAATGTTAAAATTTGTTAATAGAAAGTTGACGTGTCATTAAATTATTGTTTTGTTAATATATTTGGACACATAATTATACCACTTGAATATGTCACTTGGAAGAAATGAATTTTGTTAATGATAGGTTAGATTTTGTTGATGAGCTAGTTGAGTTTCATGTGTCAAGTAACATTCGAGTGACACATTCATGTGTTCAAATATGTTAATAAAACAATAATTTGATGATAAATCAAATTTTTGTTAACAAATTTTAACAATTTCTTTATGGAATGACATAATTGAAAATTTTTCTATACATTTAGAGTAAAATTGAAAATTTTAAAAGATTAAAGACCAAATTAAAAATTACCTTAAAGATTAAGGACCATTTGATATATTTAGCGAAAAACTAATTTACTTAAAAATTAATAAGTGGGAATTAAAATAATGGTTTAAATATTATGTTAGTCTCTGTACTTTGAACTTTTGTTCATTTTAGTTCTTGTACTTTCAAAATATTTATTTTTGGTCCCTGTACTTTGAGCTTTTATTCATTTTGGTCTTTTTACTTTCAAAATATTCATTTTTGGTTCCTGTACTATCAGGTTTTGTCCACTTTAGACCCTATACTTTCAAGAGATTTACCATTTTGGTTCTTTGATTTTCCTTTTTATCTCATTTTTTTCAATCACATTTTTAGCACAATAATACATTCAGTAAATTTCTTGAAATATTATCATATTTTTGTATTAAAAAGTTGTCGTTGAGTATAGAATTTGTATTAGAATTTATTAAATATGGATCAAAACGATTATTTTTTAAAAGTACATGGATTAAAATGGATGTTTTGAAAGTAGAAGGACTAAAATAGACAAAAACTGAAAGCACATTAACCAAAAATGAATATTTTAAAAATATAAGGACTAAAATAAACAAAAACTCAAAATATATGGACTAAAATAGTATTTAAACCTAAAATAATTTACCATTGAAAAACAAATAAGAAAAATTTAGAAATGCAGCAATATGCAATCCCAGGATTACGATTTACGATATATCACTTCACCTTCCAGCGAGACGAAGCCCTAACTTCCCACCACTCTCTGTTTCACTTTCTTCCTCTTTTTCTTTGACGAAGAACAGGACGAAGCAAATGTCACGTCGGGAAGCTCGGGAATCCGACTCCAAGCGCTACCGGTCCAGATTCGATAGAGAACCCAGGTACCCTCGTCTCCTTTTCCGATTGCGTCCCCGCATCTAAGTGTCTCTGAGTTTATTGATTGATGGAGAATGTGTTCGAGTTGAATAGATCATCGTTGCGTCAACTTCCGTTAAGATTTCGGGTAACCATGATTTGGCGCCAATATGCCTGCGTGCCAGCGTGTGTGAAAATTTGTGGATGATGTTTGTTTTGATGTTATCGTAATTGGAAGGGACACTGTTCATTAAGCGTTCTACTTCGTTTTCGATTATGGGCTTTCATTTTTTCTTTTAAAAGGAAATTTGTTTAATTTGATTGTCTTTTGTACCCACTTGGATTGATATGATATGTTTAAATGGGTCTCAAGGAATTTGCTTTTATGTAGCTCTTTTGTATGGTAGGACGAACTAGTTCATTAGTTTTGGAGTTTTTTTTCTTAAGGTGGAATTATCATCCAACAAATTTTCACCGTATGTTGATTGGTTTGTCTTTGAGGCCTTGCTCCATTAGTTTGTCACTAATGATGTGAGAGAGAAAATTTGTAATTGAAGTGCTTACATGTAATTTGAAGTGCTTGGACTCTGAAGTGTATGCTAATGTGTACTTGAAACTTAGAGTTAGTTATGTTTACCTGGGGTTGATTGTTGAGTGTATGGATAGAAATGGTACTGTGGCCAATCAATTTTGGAATACACATTACTTTAATAGTTTCTTTTATTTTACCGCAATAGCCATTATTAAGTGGAGAAGATCTGCATTATTCTGAGAAACTGGTTACTTGATTTTCATCCCATAGATATATTTCTAGCTCCTAGCTACAAAGAATATGTATTTTGCTTGTTATCAAATAAATGGCTGGACAGTTGCTTTTCCGACGCTCAGTCTCATTGTTGCATATGTGTATCATTTCTATGTTCGATTTACTTCATAGTTTTTGATGGCTACTTGGTGACATATCTGATGACTATCAACCCTGTATCATAGAAATTAATTTTCCTTTAGTTCCAAAATGGCCTAAACAAATATTATGTTTCACTTTCTCACTTAGTCAAAAGTGAGGCTCTGAAAAGAAATACATGACCTTATATGGATATTGTGGCAATAGGATGGCTCCATTCTTTTTCTTCCAATTGAATTCGATGGAGTACTTTATATAGAATAAGTGATGCATCTAAGTATCATGTGACAGTGAATCATGGAACTCTAATATGACTTAAATTTGTGACTTATTGATCCTAGTCCCAAGAGGTCTAGGAGGGACAGGAAACCATTAGACGATAAGTTATCCAGAAACTCGGACAGGAAACCATTAGATGAGAAGCTATCCAGAGACTCGGACAGGAAACCATTAGACGAGAAGCTATCCAGGGACTCGGACAGGAAACCATTAGATGAGAAGTTATCCAGAAACTCTAGTTCTCATGTTGAAGATAATAAAGATCGGGATCAGAAGCATGAGCTTTGTCACAGGGGGCAAGATATGATACCCCATGAGTCTTCATTAACACTCGATTCTAAGCCAGAAGGTGGGGTTGTTAGCAAAGAAGCAAACAGGAACAGCGATGGGAGGGATGGAGGGACTAAACATTCATTGAATCCCACTGAAGTACCACGATCACGATCTTATTTTCAGGTCTGCTCTATGTTAAAGCATTTTTCCAATTAATTTTGATAATTTGTTTTCTATTTCGTTTTTTCTCCAAAGAAAATTAATGTGATTCTAGTTTGGTTTTGCCCTTGTCCGCTATGGAACAAATTTTTATTATTTAATCTGAAGAATTGTTGACAGCATCTTAAATCTCATTATTGGTATGCTTCACGATTCTTTATTCTGCATCCATATCCCCAAACCTTTTTGGTTTAGACTCAGATTGTTTGTTGGGTGGCAAAGAATAAGGTTGGAAGCATCAAAAGTTATGTATTTTTATGTTCGAATTTAATTGTAATTGATATTATTCTTTGCTACTTTTTACATAAACTGTCGAAGTGGGACTGCTGCAAGACATGAGCATAACAATTATGTGATTTAGTCTCCTTAGAGCTATTGTTCTACCTACTCAGATAGAAATGAATTTGTGTTGGAGTTTTTCTTTGAATTGTATGAAATTCATGACCTACATTATATTTCATTCAAATATGCAGGATACAAAGGTAGTTGTAATCGATGTTTATTGAAGCACATTGATGCACGATAGTCTTGATAGTCTTGTGGGGCTTAAGTGCAAAATGTAGAAAAACACAGCCAGAGGAAGTATGATATAATGAAAAAATTTAAGAAATGAAGGTTTTCTTTAAGAGGTTGTTTAAAGAAATAGGCATCCCAGCCATAAAAGGCATTTTCTTCCTTAAAAGAACTGATAAATTAAAAAAAAACCCTAGGCATACACTGCAACGTGGGTCTCCTCAGTTGGTGTAAGGCGAGGTGCCCCAGTGGCACTCAAAACCGATGAGTGCTTTTTAAAACTATGGTTGTAACATGCTTTTATGGCTTATGAAGGATATGTTTGCACAGTCAAACAAACCTTAATATCTTTTTGAGATCTTATATTTAGGTAGCTGTGGACTTTCATCATCCACATTAATAAAATTTAAATAGCTTAGCTCAGTAATAATTCCACCCCCCCCCCCCCCCCCCCCCCCAAACTTTTTCCATTTTAATTATTTGTTGCAATTTAGACTACAAAACCTTTTTGCTGGGCTGATGTAATTGGAATCTTGTTCAGCCCTGTGCCTTCAAGTGCATCCGTGTATATAACCTCTTAGGCTTGCCTGTGCATGTCTTATAACAGCACGACGAACGTGGTAATGCCGGGCAAGTTGGTCGAAGTTTTGGTTGGAGTGCAACTAGTGGTGAGTTTCCTCACTTCCTTTTAAACCTGATTCCAGCTTTTTCAAATTCTTTTCATTTTTCCTCTTGTGCAACACCATGAGTATATAGCAGTGCACAAAGTAGACACTGTCTAGTCCTTGTAACATCACTAATCATCGCTATTAAGCATGCATTATTTTTTTCTTCCTTTTTTATATATTGACTCTCATAATTTCTTTAGCTATTTTGAGTAGTTAATAAATACTATTAACATATAATACACGGTTCTGGTTTTTTTTTAGAGCGTGGGTGGTGGAAGGATTCAAAGGATCAGGATAACGATAGGGCATCTGGAAAGACAGCAACTTATAATTCACAGCAAAGAGATGAGATACCACAAACCATGAGGGAGGATAATCACACGAGGCACCGTGATGCGTCCTCGAAATTGGAGGTCGATGCACCAGCTCCTGCTAGGAAAAGACCTGCATTTAGGGAGAAGAAGATTACAGTAGACTCTGTAAATGTTGAGAAAGCGGCTATGGCATCGGAGAGTAAGAAATCAAGTGATCCACATCATCCTCAAGATGGAAGGGAATGGAGAGAAGGAAGAGGCCGTGATACCCGTTATTCTGAGAAACTTTATAAGCATGTCACTGGAGACATGGCTACCAAAAGGGATGAGATAAAGAGAGGTGGCTACCCAGTGAGAGAAAGGTATGGCAATGGAGGTGGTAGTGGTGGAAATTACAGGGGAAGAGACAGATTCGGTGGGAGGCAAGGATATCGAGCTGGTGGTACCCGTGTAGAGAAATGGAAGCACGATCTGTTTCACGAGGCTAACCGGAGTCCAACACCGAAGAATGAAGAGGACCAAATTGCCAAGGTTGAAGCGCTCCTTGCTTCTTAG

mRNA sequence

ATGTCAATCACTACCTTCAAACTCCCGCCATTGATGGAGTTCACACAGTTGATTTCCCGAATCACCGAAACCTTCTCGCCAATTCAAAGAAACTCAAGTAAAATCCTCGCCTCTTCCTCATCCAAATGCCCTAATTCCCAATTACCAGTTCCATCAAATTCGCCCAAACCATCGAAATCCCTACAGCGAAGCACTCCAAGAGACGAAAACAAGAGCAGATTCAGAGAAGAAAACATACCGACGATGTCTGAGATTCTCGCGGCTGGCAAGGCCCAGAATCTGGACCTCCGGCTTCAAACGTTGGGGCCGTTCTTCAGAATCACGGCGAAAAGCTTGGAATCGCAGCAGGAGGTTGGGAAGGCAGAGGGATTGGTTAGAGTGTGGTTGGGAGGGAGGATTCTTCATCTGGATTCGATCCGATTGAGCAGAGAGAGCTTGGGAATGGAGAAGTCGATCTTCGGACTCGGATTGTTCATTGGCGCTGTTGCGATTCGATATGGGTTCGATTGTGGATGCAAGACGGCTGAGTTATTGGCGATCAACGACTCGGATCTTTACCATTCCAAGCTGGTTAGGTTCTACACGAGGATTGGGTTCAAGAGTGTGCATGAATTGAGTGGTTCAAAGGTAGGAGACATTGGGGACATGTTGGTGTGGGGAGGGGTAGGGACTAGAATGGATGCAAACATTGAAGGGCTTCTACTTAAATGGACGAAGCAAATGTCACGTCGGGAAGCTCGGGAATCCGACTCCAAGCGCTACCGGTCCAGATTCGATAGAGAACCCAGTCCCAAGAGGTCTAGGAGGGACAGGAAACCATTAGACGATAAGTTATCCAGAAACTCGGACAGGAAACCATTAGATGAGAAGCTATCCAGAGACTCGGACAGGAAACCATTAGACGAGAAGCTATCCAGGGACTCGGACAGGAAACCATTAGATGAGAAGTTATCCAGAAACTCTAGTTCTCATGTTGAAGATAATAAAGATCGGGATCAGAAGCATGAGCTTTGTCACAGGGGGCAAGATATGATACCCCATGAGTCTTCATTAACACTCGATTCTAAGCCAGAAGGTGGGGTTGTTAGCAAAGAAGCAAACAGGAACAGCGATGGGAGGGATGGAGGGACTAAACATTCATTGAATCCCACTGAAGTACCACGATCACGATCTTATTTTCAGCACGACGAACGTGGTAATGCCGGGCAAGTTGGTCGAAGTTTTGGTTGGAGTGCAACTAGTGAGCGTGGGTGGTGGAAGGATTCAAAGGATCAGGATAACGATAGGGCATCTGGAAAGACAGCAACTTATAATTCACAGCAAAGAGATGAGATACCACAAACCATGAGGGAGGATAATCACACGAGGCACCGTGATGCGTCCTCGAAATTGGAGGTCGATGCACCAGCTCCTGCTAGGAAAAGACCTGCATTTAGGGAGAAGAAGATTACAGTAGACTCTGTAAATGTTGAGAAAGCGGCTATGGCATCGGAGAGTAAGAAATCAAGTGATCCACATCATCCTCAAGATGGAAGGGAATGGAGAGAAGGAAGAGGCCGTGATACCCGTTATTCTGAGAAACTTTATAAGCATGTCACTGGAGACATGGCTACCAAAAGGGATGAGATAAAGAGAGGTGGCTACCCAGTGAGAGAAAGGTATGGCAATGGAGGTGGTAGTGGTGGAAATTACAGGGGAAGAGACAGATTCGGTGGGAGGCAAGGATATCGAGCTGGTGGTACCCGTGTAGAGAAATGGAAGCACGATCTGTTTCACGAGGCTAACCGGAGTCCAACACCGAAGAATGAAGAGGACCAAATTGCCAAGGTTGAAGCGCTCCTTGCTTCTTAG

Coding sequence (CDS)

ATGTCAATCACTACCTTCAAACTCCCGCCATTGATGGAGTTCACACAGTTGATTTCCCGAATCACCGAAACCTTCTCGCCAATTCAAAGAAACTCAAGTAAAATCCTCGCCTCTTCCTCATCCAAATGCCCTAATTCCCAATTACCAGTTCCATCAAATTCGCCCAAACCATCGAAATCCCTACAGCGAAGCACTCCAAGAGACGAAAACAAGAGCAGATTCAGAGAAGAAAACATACCGACGATGTCTGAGATTCTCGCGGCTGGCAAGGCCCAGAATCTGGACCTCCGGCTTCAAACGTTGGGGCCGTTCTTCAGAATCACGGCGAAAAGCTTGGAATCGCAGCAGGAGGTTGGGAAGGCAGAGGGATTGGTTAGAGTGTGGTTGGGAGGGAGGATTCTTCATCTGGATTCGATCCGATTGAGCAGAGAGAGCTTGGGAATGGAGAAGTCGATCTTCGGACTCGGATTGTTCATTGGCGCTGTTGCGATTCGATATGGGTTCGATTGTGGATGCAAGACGGCTGAGTTATTGGCGATCAACGACTCGGATCTTTACCATTCCAAGCTGGTTAGGTTCTACACGAGGATTGGGTTCAAGAGTGTGCATGAATTGAGTGGTTCAAAGGTAGGAGACATTGGGGACATGTTGGTGTGGGGAGGGGTAGGGACTAGAATGGATGCAAACATTGAAGGGCTTCTACTTAAATGGACGAAGCAAATGTCACGTCGGGAAGCTCGGGAATCCGACTCCAAGCGCTACCGGTCCAGATTCGATAGAGAACCCAGTCCCAAGAGGTCTAGGAGGGACAGGAAACCATTAGACGATAAGTTATCCAGAAACTCGGACAGGAAACCATTAGATGAGAAGCTATCCAGAGACTCGGACAGGAAACCATTAGACGAGAAGCTATCCAGGGACTCGGACAGGAAACCATTAGATGAGAAGTTATCCAGAAACTCTAGTTCTCATGTTGAAGATAATAAAGATCGGGATCAGAAGCATGAGCTTTGTCACAGGGGGCAAGATATGATACCCCATGAGTCTTCATTAACACTCGATTCTAAGCCAGAAGGTGGGGTTGTTAGCAAAGAAGCAAACAGGAACAGCGATGGGAGGGATGGAGGGACTAAACATTCATTGAATCCCACTGAAGTACCACGATCACGATCTTATTTTCAGCACGACGAACGTGGTAATGCCGGGCAAGTTGGTCGAAGTTTTGGTTGGAGTGCAACTAGTGAGCGTGGGTGGTGGAAGGATTCAAAGGATCAGGATAACGATAGGGCATCTGGAAAGACAGCAACTTATAATTCACAGCAAAGAGATGAGATACCACAAACCATGAGGGAGGATAATCACACGAGGCACCGTGATGCGTCCTCGAAATTGGAGGTCGATGCACCAGCTCCTGCTAGGAAAAGACCTGCATTTAGGGAGAAGAAGATTACAGTAGACTCTGTAAATGTTGAGAAAGCGGCTATGGCATCGGAGAGTAAGAAATCAAGTGATCCACATCATCCTCAAGATGGAAGGGAATGGAGAGAAGGAAGAGGCCGTGATACCCGTTATTCTGAGAAACTTTATAAGCATGTCACTGGAGACATGGCTACCAAAAGGGATGAGATAAAGAGAGGTGGCTACCCAGTGAGAGAAAGGTATGGCAATGGAGGTGGTAGTGGTGGAAATTACAGGGGAAGAGACAGATTCGGTGGGAGGCAAGGATATCGAGCTGGTGGTACCCGTGTAGAGAAATGGAAGCACGATCTGTTTCACGAGGCTAACCGGAGTCCAACACCGAAGAATGAAGAGGACCAAATTGCCAAGGTTGAAGCGCTCCTTGCTTCTTAG

Protein sequence

MSITTFKLPPLMEFTQLISRITETFSPIQRNSSKILASSSSKCPNSQLPVPSNSPKPSKSLQRSTPRDENKSRFREENIPTMSEILAAGKAQNLDLRLQTLGPFFRITAKSLESQQEVGKAEGLVRVWLGGRILHLDSIRLSRESLGMEKSIFGLGLFIGAVAIRYGFDCGCKTAELLAINDSDLYHSKLVRFYTRIGFKSVHELSGSKVGDIGDMLVWGGVGTRMDANIEGLLLKWTKQMSRREARESDSKRYRSRFDREPSPKRSRRDRKPLDDKLSRNSDRKPLDEKLSRDSDRKPLDEKLSRDSDRKPLDEKLSRNSSSHVEDNKDRDQKHELCHRGQDMIPHESSLTLDSKPEGGVVSKEANRNSDGRDGGTKHSLNPTEVPRSRSYFQHDERGNAGQVGRSFGWSATSERGWWKDSKDQDNDRASGKTATYNSQQRDEIPQTMREDNHTRHRDASSKLEVDAPAPARKRPAFREKKITVDSVNVEKAAMASESKKSSDPHHPQDGREWREGRGRDTRYSEKLYKHVTGDMATKRDEIKRGGYPVRERYGNGGGSGGNYRGRDRFGGRQGYRAGGTRVEKWKHDLFHEANRSPTPKNEEDQIAKVEALLAS

Homology

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BLAST of Sgr029896 vs. NCBI nr
Match: KAG6576912.1 (hypothetical protein SDJN03_24486, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 630.2 bits (1624), Expect = 1.9e-176
Identity = 365/528 (69.13%), Postives = 396/528 (75.00%), Query Frame = 0


Query: 1   MSITTFKLPPLMEFTQLISRITETFSPIQRNSSK--ILASSSSKCPNSQLPVPSNSPKPS 60
           MSIT FKLPP ME T  I  I + FSPI R  +K  + +SSSSK PN QLP+PS SPKP 
Sbjct: 1   MSITAFKLPPSMELTVPIPLIPQNFSPIHRALTKFHVTSSSSSKSPNFQLPLPSKSPKPP 60

Query: 61  KSLQRSTPRDENKSRFREENIPTMSEILAAGKAQNLDLRLQTLGPFFRITAKSLESQQEV 120
           K+L             R E  PTM+EILAAG+AQN+ LRLQTLGPFFRITAKSLESQ+E+
Sbjct: 61  KALIDP----------RGEEFPTMAEILAAGEAQNISLRLQTLGPFFRITAKSLESQREI 120

Query: 121 GKAEGLVRVWLGGRILHLDSIRLSRESLGMEKSIFGLGLFIGAVAIRYGFDCGCKTAELL 180
           GKAEGL+RVWL GRILHLDSIRL RESLGMEKSIFGLGLFIGAVAIRYG+DCGC+TAELL
Sbjct: 121 GKAEGLIRVWLRGRILHLDSIRLKRESLGMEKSIFGLGLFIGAVAIRYGYDCGCRTAELL 180

Query: 181 AINDSDLYHSKLVRFYTRIGFKSVHELSGSKVGDIGDMLVWGGVGTRMDANIEGLLLKW- 240
           AINDSDLYHSKLVRFYTRIGFKSV+E+SGSKVGDIGDMLVWGGVGTRMDA IE LLLKW 
Sbjct: 181 AINDSDLYHSKLVRFYTRIGFKSVYEVSGSKVGDIGDMLVWGGVGTRMDAPIEALLLKWC 240

Query: 241 ------TKQMSRREARESDSKRYRSRFDREPSPKRSRRDRKPLDDKLSRNSDRKPLDEKL 300
                  KQMSRRE R+SDS  +RSRFD E SPKRSRR                      
Sbjct: 241 SREENGAKQMSRREIRKSDSNLHRSRFDGESSPKRSRR---------------------- 300

Query: 301 SRDSDRKPLDEKLSRDSDRKPLDEKLSRNSSSHVEDNKDRDQKHELCHRGQDMIPHESSL 360
                            DRK L+EKLSRNSSSHVEDNKDRDQKH L H GQDMIPHE S 
Sbjct: 301 -----------------DRKTLEEKLSRNSSSHVEDNKDRDQKHGLQHEGQDMIPHECSS 360

Query: 361 TLDSKPEGGVVSKEANRNSDGRDGGTKHSLNPTEVPRSRSYFQHDERGNAGQV----GRS 420
            LDSKPE G VSK  NRNSD RDGGTKHS+NPTEVPRSRSYFQHD+RGN GQV    GRS
Sbjct: 361 ALDSKPEYG-VSKGENRNSDRRDGGTKHSMNPTEVPRSRSYFQHDKRGNDGQVGRSFGRS 420

Query: 421 FGWSATSERGWWKDS--KDQDNDRASGKTATYNSQQRDEIPQTMREDNHTRHRDASSKLE 480
           FG SAT ERGWWKDS  K++DNDRASGK   YNSQQRDE+PQ +R+D+   HRD S KLE
Sbjct: 421 FGRSATRERGWWKDSREKEKDNDRASGKGTAYNSQQRDEMPQAVRDDS---HRDESWKLE 475

Query: 481 VDAPAPARKRPAFREKKITVDSVNVEKAAMASESKKSSDPHHPQDGRE 514
            DAP  ARKRPAF EKKITV + + EKAAM SE +KSSDPH P+DGRE
Sbjct: 481 DDAPTSARKRPAFSEKKITVGNESGEKAAMVSEIQKSSDPHQPRDGRE 475

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BLAST of Sgr029896 vs. NCBI nr
Match: XP_023548006.1 (pre-mRNA-splicing factor CWC25-like [Cucurbita pepo subsp. pepo] >XP_023548014.1 pre-mRNA-splicing factor CWC25-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 522.7 bits (1345), Expect = 4.3e-144
Identity = 294/379 (77.57%), Postives = 311/379 (82.06%), Query Frame = 0


Query: 241 MSRREARESDSKRYRSRFDREPSPKRSRRDRKPLDDKLSRNSDRKPLDEKLSRDSDRKPL 300
           MSRREARESDSKRYRSRFDREPSPKRSRR                               
Sbjct: 1   MSRREARESDSKRYRSRFDREPSPKRSRR------------------------------- 60

Query: 301 DEKLSRDSDRKPLDEKLSRNSSSHVEDNKDRDQKHELCHRGQDMIPHESSLTLDSKPEGG 360
                   DRKPL+EKLSRNSSSHVEDNKDRDQKHEL H GQD+ PHESSL LDS PEGG
Sbjct: 61  --------DRKPLEEKLSRNSSSHVEDNKDRDQKHELRHEGQDVTPHESSLALDSHPEGG 120

Query: 361 VVSKEANRNSDGRDGGTKHSLNPTEVPRSRSYFQHDERGNAGQVGRSFGWSATSERGWWK 420
            VSK ANRNSD R+GGTK SLNPTEVPRSRSYFQHD+RG+AGQVGRSFG S++S RGWWK
Sbjct: 121 -VSKGANRNSDEREGGTKRSLNPTEVPRSRSYFQHDKRGSAGQVGRSFGRSSSSGRGWWK 180

Query: 421 DSKDQD--NDRASGKTATYNSQQRDEIPQTMREDNHTRHRDASSKLEVDAPAPARKRPAF 480
           DSK+QD  +DRASGKTATYNSQ+RDEIPQT++EDNHTR RD SSKLEVD+ APARKRPAF
Sbjct: 181 DSKEQDKNSDRASGKTATYNSQRRDEIPQTVKEDNHTRTRDGSSKLEVDSSAPARKRPAF 240

Query: 481 REKKITVDSVNVEKAAMASESKKSSDPHHPQDGREWREGRGRDTRYSEKLYKHVTGDMAT 540
           REKKIT D+ N EKA MASESKK SDPH PQDGRE RE RGRDTRYS+KL KHVTGDMA+
Sbjct: 241 REKKITPDNENFEKAGMASESKKLSDPHQPQDGRERREERGRDTRYSDKLSKHVTGDMAS 300

Query: 541 KRDEIKRGGYPVRERYGNGGGSGGNYRGRDRFGGRQGYRA-GGTRVEKWKHDLFHEANRS 600
           KRDE+KRGGY VRERYGNGGG GGNYRGRDRFGGRQGY A GGTRVEKWKHDLFHEANRS
Sbjct: 301 KRDEMKRGGYSVRERYGNGGG-GGNYRGRDRFGGRQGYPASGGTRVEKWKHDLFHEANRS 338

Query: 601 PTPKNEEDQIAKVEALLAS 617
           PTPKNEEDQIAKVEALLAS
Sbjct: 361 PTPKNEEDQIAKVEALLAS 338

[Close]

BLAST of Sgr029896 vs. NCBI nr
Match: XP_022942670.1 (pre-mRNA-splicing factor CWC25-like isoform X1 [Cucurbita moschata] >XP_022942671.1 pre-mRNA-splicing factor CWC25-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 521.2 bits (1341), Expect = 1.2e-143
Identity = 293/379 (77.31%), Postives = 310/379 (81.79%), Query Frame = 0


Query: 241 MSRREARESDSKRYRSRFDREPSPKRSRRDRKPLDDKLSRNSDRKPLDEKLSRDSDRKPL 300
           MSRREARESDSKRYRSRFD+EPSPKRSRR                               
Sbjct: 1   MSRREARESDSKRYRSRFDKEPSPKRSRR------------------------------- 60

Query: 301 DEKLSRDSDRKPLDEKLSRNSSSHVEDNKDRDQKHELCHRGQDMIPHESSLTLDSKPEGG 360
                   DRKPL+EKLSRNSSSHVEDNKDRDQKHEL H GQD  PHESSL LDS PEGG
Sbjct: 61  --------DRKPLEEKLSRNSSSHVEDNKDRDQKHELRHEGQDATPHESSLALDSHPEGG 120

Query: 361 VVSKEANRNSDGRDGGTKHSLNPTEVPRSRSYFQHDERGNAGQVGRSFGWSATSERGWWK 420
            VSK ANRNSD R+GGTK SLNPTEVPRSRSYFQHD+RG+AGQVGRSFG S++S RGWWK
Sbjct: 121 -VSKGANRNSDEREGGTKRSLNPTEVPRSRSYFQHDKRGSAGQVGRSFGRSSSSGRGWWK 180

Query: 421 DSKDQD--NDRASGKTATYNSQQRDEIPQTMREDNHTRHRDASSKLEVDAPAPARKRPAF 480
           DSK+QD  +DRASGKTATYNSQ+RDEIPQT++EDNHTR RD SSKLEVD+ APARKRPAF
Sbjct: 181 DSKEQDKNSDRASGKTATYNSQRRDEIPQTVKEDNHTRTRDGSSKLEVDSSAPARKRPAF 240

Query: 481 REKKITVDSVNVEKAAMASESKKSSDPHHPQDGREWREGRGRDTRYSEKLYKHVTGDMAT 540
           REKKIT D+ N EKA MASESKK SDPH PQDGRE RE RGRDTRYS+KL KHVTGDMA+
Sbjct: 241 REKKITPDNENFEKAGMASESKKPSDPHQPQDGRERREERGRDTRYSDKLSKHVTGDMAS 300

Query: 541 KRDEIKRGGYPVRERYGNGGGSGGNYRGRDRFGGRQGYRA-GGTRVEKWKHDLFHEANRS 600
           KRDE+KRGGY VRERYGNGGG GGNYRGRDRFGGRQGY A GGTRVEKWKHDLFHEANRS
Sbjct: 301 KRDEMKRGGYSVRERYGNGGG-GGNYRGRDRFGGRQGYPASGGTRVEKWKHDLFHEANRS 338

Query: 601 PTPKNEEDQIAKVEALLAS 617
           PTPKNEEDQIAKVEALLAS
Sbjct: 361 PTPKNEEDQIAKVEALLAS 338

[Close]

BLAST of Sgr029896 vs. NCBI nr
Match: KAG6600285.1 (hypothetical protein SDJN03_05518, partial [Cucurbita argyrosperma subsp. sororia] >KAG7030943.1 hypothetical protein SDJN02_04980 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 519.6 bits (1337), Expect = 3.6e-143
Identity = 292/379 (77.04%), Postives = 309/379 (81.53%), Query Frame = 0


Query: 241 MSRREARESDSKRYRSRFDREPSPKRSRRDRKPLDDKLSRNSDRKPLDEKLSRDSDRKPL 300
           MSRREARESDSKRYRSRFD+EPSPKRSRR                               
Sbjct: 1   MSRREARESDSKRYRSRFDKEPSPKRSRR------------------------------- 60

Query: 301 DEKLSRDSDRKPLDEKLSRNSSSHVEDNKDRDQKHELCHRGQDMIPHESSLTLDSKPEGG 360
                   DRKPL+EKLSRNSSSHVEDNKDRDQKHEL H GQD  PHESSL LDS PEGG
Sbjct: 61  --------DRKPLEEKLSRNSSSHVEDNKDRDQKHELRHEGQDATPHESSLALDSHPEGG 120

Query: 361 VVSKEANRNSDGRDGGTKHSLNPTEVPRSRSYFQHDERGNAGQVGRSFGWSATSERGWWK 420
            VSK ANRNSD R+GGTK SLNPTE PRSRSYFQHD+RG+AGQVGRSFG S++S RGWWK
Sbjct: 121 -VSKGANRNSDEREGGTKRSLNPTEAPRSRSYFQHDKRGSAGQVGRSFGRSSSSGRGWWK 180

Query: 421 DSKDQD--NDRASGKTATYNSQQRDEIPQTMREDNHTRHRDASSKLEVDAPAPARKRPAF 480
           DSK+QD  +DRASGKTATYNSQ+RDEIPQT++EDNHTR RD SSKLEVD+ APARKRPAF
Sbjct: 181 DSKEQDKNSDRASGKTATYNSQRRDEIPQTVKEDNHTRTRDGSSKLEVDSSAPARKRPAF 240

Query: 481 REKKITVDSVNVEKAAMASESKKSSDPHHPQDGREWREGRGRDTRYSEKLYKHVTGDMAT 540
           REKKIT D+ N EKA MASESKK SDPH PQDGRE RE RGRDTRYS+KL KHVTGDMA+
Sbjct: 241 REKKITPDNENFEKAGMASESKKPSDPHQPQDGRERREERGRDTRYSDKLSKHVTGDMAS 300

Query: 541 KRDEIKRGGYPVRERYGNGGGSGGNYRGRDRFGGRQGYRA-GGTRVEKWKHDLFHEANRS 600
           KRDE+KRGGY VRERYGNGGG GGNYRGRDRFGGRQGY A GGTRVEKWKHDLFHEANRS
Sbjct: 301 KRDEMKRGGYSVRERYGNGGG-GGNYRGRDRFGGRQGYPASGGTRVEKWKHDLFHEANRS 338

Query: 601 PTPKNEEDQIAKVEALLAS 617
           PTPKNEEDQIAKVEALLAS
Sbjct: 361 PTPKNEEDQIAKVEALLAS 338

[Close]

BLAST of Sgr029896 vs. NCBI nr
Match: XP_022984546.1 (pre-mRNA-splicing factor CWC25 isoform X1 [Cucurbita maxima])

HSP 1 Score: 517.7 bits (1332), Expect = 1.4e-142
Identity = 292/379 (77.04%), Postives = 310/379 (81.79%), Query Frame = 0


Query: 241 MSRREARESDSKRYRSRFDREPSPKRSRRDRKPLDDKLSRNSDRKPLDEKLSRDSDRKPL 300
           MSRREARESDSKRYRSRFDREPSPKRSRR                               
Sbjct: 1   MSRREARESDSKRYRSRFDREPSPKRSRR------------------------------- 60

Query: 301 DEKLSRDSDRKPLDEKLSRNSSSHVEDNKDRDQKHELCHRGQDMIPHESSLTLDSKPEGG 360
                   DRKPL+EKLSRNSSSHVEDNKDRDQKHEL H GQD+ PHESSL LDS PEGG
Sbjct: 61  --------DRKPLEEKLSRNSSSHVEDNKDRDQKHELRHEGQDVTPHESSLALDSHPEGG 120

Query: 361 VVSKEANRNSDGRDGGTKHSLNPTEVPRSRSYFQHDERGNAGQVGRSFGWSATSERGWWK 420
            VSK ANRNSD R+GGTK +LNPTEVPRSRSYFQHD+RG+AGQVGRSFG S++S RGWWK
Sbjct: 121 -VSKGANRNSDEREGGTKRALNPTEVPRSRSYFQHDKRGSAGQVGRSFGRSSSSGRGWWK 180

Query: 421 DSKDQD--NDRASGKTATYNSQQRDEIPQTMREDNHTRHRDASSKLEVDAPAPARKRPAF 480
           DSK+QD  +DRASGKTATYNSQ+RDEIPQT++EDNHTR RD SSKLEVD+ APARKRPAF
Sbjct: 181 DSKEQDKNSDRASGKTATYNSQRRDEIPQTVKEDNHTRTRDGSSKLEVDSSAPARKRPAF 240

Query: 481 REKKITVDSVNVEKAAMASESKKSSDPHHPQDGREWREGRGRDTRYSEKLYKHVTGDMAT 540
           REKKIT D+ N EKA MASESKK SDPH PQDGRE RE RGRDTRYS+KL KHVTGDMA+
Sbjct: 241 REKKITPDNENFEKAGMASESKKLSDPHPPQDGRERREERGRDTRYSDKLSKHVTGDMAS 300

Query: 541 KRDEIKRGGYPVRERYGNGGGSGGNYRGRDRFGGRQGYRA-GGTRVEKWKHDLFHEANRS 600
           KRDE+KRGGY VRERYGNGGG GGNYRGRDRFGGRQGY A GGTRVEKWKHDLFHEANRS
Sbjct: 301 KRDEMKRGGYSVRERYGNGGG-GGNYRGRDRFGGRQGYPASGGTRVEKWKHDLFHEANRS 338

Query: 601 PTPKNEEDQIAKVEALLAS 617
           PTPKNEE QIAKVEALLAS
Sbjct: 361 PTPKNEEAQIAKVEALLAS 338

[Close]

BLAST of Sgr029896 vs. ExPASy TrEMBL
Match: A0A6J1FPJ0 (pre-mRNA-splicing factor CWC25-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111447638 PE=4 SV=1)

HSP 1 Score: 521.2 bits (1341), Expect = 6.0e-144
Identity = 293/379 (77.31%), Postives = 310/379 (81.79%), Query Frame = 0


Query: 241 MSRREARESDSKRYRSRFDREPSPKRSRRDRKPLDDKLSRNSDRKPLDEKLSRDSDRKPL 300
           MSRREARESDSKRYRSRFD+EPSPKRSRR                               
Sbjct: 1   MSRREARESDSKRYRSRFDKEPSPKRSRR------------------------------- 60

Query: 301 DEKLSRDSDRKPLDEKLSRNSSSHVEDNKDRDQKHELCHRGQDMIPHESSLTLDSKPEGG 360
                   DRKPL+EKLSRNSSSHVEDNKDRDQKHEL H GQD  PHESSL LDS PEGG
Sbjct: 61  --------DRKPLEEKLSRNSSSHVEDNKDRDQKHELRHEGQDATPHESSLALDSHPEGG 120

Query: 361 VVSKEANRNSDGRDGGTKHSLNPTEVPRSRSYFQHDERGNAGQVGRSFGWSATSERGWWK 420
            VSK ANRNSD R+GGTK SLNPTEVPRSRSYFQHD+RG+AGQVGRSFG S++S RGWWK
Sbjct: 121 -VSKGANRNSDEREGGTKRSLNPTEVPRSRSYFQHDKRGSAGQVGRSFGRSSSSGRGWWK 180

Query: 421 DSKDQD--NDRASGKTATYNSQQRDEIPQTMREDNHTRHRDASSKLEVDAPAPARKRPAF 480
           DSK+QD  +DRASGKTATYNSQ+RDEIPQT++EDNHTR RD SSKLEVD+ APARKRPAF
Sbjct: 181 DSKEQDKNSDRASGKTATYNSQRRDEIPQTVKEDNHTRTRDGSSKLEVDSSAPARKRPAF 240

Query: 481 REKKITVDSVNVEKAAMASESKKSSDPHHPQDGREWREGRGRDTRYSEKLYKHVTGDMAT 540
           REKKIT D+ N EKA MASESKK SDPH PQDGRE RE RGRDTRYS+KL KHVTGDMA+
Sbjct: 241 REKKITPDNENFEKAGMASESKKPSDPHQPQDGRERREERGRDTRYSDKLSKHVTGDMAS 300

Query: 541 KRDEIKRGGYPVRERYGNGGGSGGNYRGRDRFGGRQGYRA-GGTRVEKWKHDLFHEANRS 600
           KRDE+KRGGY VRERYGNGGG GGNYRGRDRFGGRQGY A GGTRVEKWKHDLFHEANRS
Sbjct: 301 KRDEMKRGGYSVRERYGNGGG-GGNYRGRDRFGGRQGYPASGGTRVEKWKHDLFHEANRS 338

Query: 601 PTPKNEEDQIAKVEALLAS 617
           PTPKNEEDQIAKVEALLAS
Sbjct: 361 PTPKNEEDQIAKVEALLAS 338

[Close]

BLAST of Sgr029896 vs. ExPASy TrEMBL
Match: A0A6J1J5K1 (pre-mRNA-splicing factor CWC25 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111482807 PE=4 SV=1)

HSP 1 Score: 517.7 bits (1332), Expect = 6.7e-143
Identity = 292/379 (77.04%), Postives = 310/379 (81.79%), Query Frame = 0


Query: 241 MSRREARESDSKRYRSRFDREPSPKRSRRDRKPLDDKLSRNSDRKPLDEKLSRDSDRKPL 300
           MSRREARESDSKRYRSRFDREPSPKRSRR                               
Sbjct: 1   MSRREARESDSKRYRSRFDREPSPKRSRR------------------------------- 60

Query: 301 DEKLSRDSDRKPLDEKLSRNSSSHVEDNKDRDQKHELCHRGQDMIPHESSLTLDSKPEGG 360
                   DRKPL+EKLSRNSSSHVEDNKDRDQKHEL H GQD+ PHESSL LDS PEGG
Sbjct: 61  --------DRKPLEEKLSRNSSSHVEDNKDRDQKHELRHEGQDVTPHESSLALDSHPEGG 120

Query: 361 VVSKEANRNSDGRDGGTKHSLNPTEVPRSRSYFQHDERGNAGQVGRSFGWSATSERGWWK 420
            VSK ANRNSD R+GGTK +LNPTEVPRSRSYFQHD+RG+AGQVGRSFG S++S RGWWK
Sbjct: 121 -VSKGANRNSDEREGGTKRALNPTEVPRSRSYFQHDKRGSAGQVGRSFGRSSSSGRGWWK 180

Query: 421 DSKDQD--NDRASGKTATYNSQQRDEIPQTMREDNHTRHRDASSKLEVDAPAPARKRPAF 480
           DSK+QD  +DRASGKTATYNSQ+RDEIPQT++EDNHTR RD SSKLEVD+ APARKRPAF
Sbjct: 181 DSKEQDKNSDRASGKTATYNSQRRDEIPQTVKEDNHTRTRDGSSKLEVDSSAPARKRPAF 240

Query: 481 REKKITVDSVNVEKAAMASESKKSSDPHHPQDGREWREGRGRDTRYSEKLYKHVTGDMAT 540
           REKKIT D+ N EKA MASESKK SDPH PQDGRE RE RGRDTRYS+KL KHVTGDMA+
Sbjct: 241 REKKITPDNENFEKAGMASESKKLSDPHPPQDGRERREERGRDTRYSDKLSKHVTGDMAS 300

Query: 541 KRDEIKRGGYPVRERYGNGGGSGGNYRGRDRFGGRQGYRA-GGTRVEKWKHDLFHEANRS 600
           KRDE+KRGGY VRERYGNGGG GGNYRGRDRFGGRQGY A GGTRVEKWKHDLFHEANRS
Sbjct: 301 KRDEMKRGGYSVRERYGNGGG-GGNYRGRDRFGGRQGYPASGGTRVEKWKHDLFHEANRS 338

Query: 601 PTPKNEEDQIAKVEALLAS 617
           PTPKNEE QIAKVEALLAS
Sbjct: 361 PTPKNEEAQIAKVEALLAS 338

[Close]

BLAST of Sgr029896 vs. ExPASy TrEMBL
Match: A0A6J1FQX4 (pre-mRNA-splicing factor CWC25-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111447638 PE=4 SV=1)

HSP 1 Score: 495.4 bits (1274), Expect = 3.6e-136
Identity = 282/379 (74.41%), Postives = 299/379 (78.89%), Query Frame = 0


Query: 241 MSRREARESDSKRYRSRFDREPSPKRSRRDRKPLDDKLSRNSDRKPLDEKLSRDSDRKPL 300
           MSRREARESDSKRYRSRFD+EPSPKRSRR                               
Sbjct: 1   MSRREARESDSKRYRSRFDKEPSPKRSRR------------------------------- 60

Query: 301 DEKLSRDSDRKPLDEKLSRNSSSHVEDNKDRDQKHELCHRGQDMIPHESSLTLDSKPEGG 360
                   DRKPL+EKLSRNSSSHVEDNKDRDQKHEL H GQD  PHESSL LDS PEGG
Sbjct: 61  --------DRKPLEEKLSRNSSSHVEDNKDRDQKHELRHEGQDATPHESSLALDSHPEGG 120

Query: 361 VVSKEANRNSDGRDGGTKHSLNPTEVPRSRSYFQHDERGNAGQVGRSFGWSATSERGWWK 420
            VSK ANRNSD R+GGTK SLNPTEVPRSRSYFQHD+RG+AGQVGRSFG S++S RGWWK
Sbjct: 121 -VSKGANRNSDEREGGTKRSLNPTEVPRSRSYFQHDKRGSAGQVGRSFGRSSSSGRGWWK 180

Query: 421 DSKDQD--NDRASGKTATYNSQQRDEIPQTMREDNHTRHRDASSKLEVDAPAPARKRPAF 480
           DSK+QD  +DRASGKTATYNSQ+RDEIPQT++EDNHTR RD SSKLEVD+ APARKRPAF
Sbjct: 181 DSKEQDKNSDRASGKTATYNSQRRDEIPQTVKEDNHTRTRDGSSKLEVDSSAPARKRPAF 240

Query: 481 REKKITVDSVNVEKAAMASESKKSSDPHHPQDGREWREGRGRDTRYSEKLYKHVTGDMAT 540
           REKKIT D+ N EKA MASESKK SDPH PQDGRE RE RGRDTRYS+KL KHVTGDMA+
Sbjct: 241 REKKITPDNENFEKAGMASESKKPSDPHQPQDGRERREERGRDTRYSDKLSKHVTGDMAS 300

Query: 541 KRDEIKRGGYPVRERYGNGGGSGGNYRGRDRFGGRQGYRA-GGTRVEKWKHDLFHEANRS 600
           KRDE+KRGG             GGNYRGRDRFGGRQGY A GGTRVEKWKHDLFHEANRS
Sbjct: 301 KRDEMKRGG-------------GGNYRGRDRFGGRQGYPASGGTRVEKWKHDLFHEANRS 326

Query: 601 PTPKNEEDQIAKVEALLAS 617
           PTPKNEEDQIAKVEALLAS
Sbjct: 361 PTPKNEEDQIAKVEALLAS 326

[Close]

BLAST of Sgr029896 vs. ExPASy TrEMBL
Match: A0A6J1JAV5 (pre-mRNA-splicing factor CWC25 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111482807 PE=4 SV=1)

HSP 1 Score: 491.9 bits (1265), Expect = 3.9e-135
Identity = 281/379 (74.14%), Postives = 299/379 (78.89%), Query Frame = 0


Query: 241 MSRREARESDSKRYRSRFDREPSPKRSRRDRKPLDDKLSRNSDRKPLDEKLSRDSDRKPL 300
           MSRREARESDSKRYRSRFDREPSPKRSRR                               
Sbjct: 1   MSRREARESDSKRYRSRFDREPSPKRSRR------------------------------- 60

Query: 301 DEKLSRDSDRKPLDEKLSRNSSSHVEDNKDRDQKHELCHRGQDMIPHESSLTLDSKPEGG 360
                   DRKPL+EKLSRNSSSHVEDNKDRDQKHEL H GQD+ PHESSL LDS PEGG
Sbjct: 61  --------DRKPLEEKLSRNSSSHVEDNKDRDQKHELRHEGQDVTPHESSLALDSHPEGG 120

Query: 361 VVSKEANRNSDGRDGGTKHSLNPTEVPRSRSYFQHDERGNAGQVGRSFGWSATSERGWWK 420
            VSK ANRNSD R+GGTK +LNPTEVPRSRSYFQHD+RG+AGQVGRSFG S++S RGWWK
Sbjct: 121 -VSKGANRNSDEREGGTKRALNPTEVPRSRSYFQHDKRGSAGQVGRSFGRSSSSGRGWWK 180

Query: 421 DSKDQD--NDRASGKTATYNSQQRDEIPQTMREDNHTRHRDASSKLEVDAPAPARKRPAF 480
           DSK+QD  +DRASGKTATYNSQ+RDEIPQT++EDNHTR RD SSKLEVD+ APARKRPAF
Sbjct: 181 DSKEQDKNSDRASGKTATYNSQRRDEIPQTVKEDNHTRTRDGSSKLEVDSSAPARKRPAF 240

Query: 481 REKKITVDSVNVEKAAMASESKKSSDPHHPQDGREWREGRGRDTRYSEKLYKHVTGDMAT 540
           REKKIT D+ N EKA MASESKK SDPH PQDGRE RE RGRDTRYS+KL KHVTGDMA+
Sbjct: 241 REKKITPDNENFEKAGMASESKKLSDPHPPQDGRERREERGRDTRYSDKLSKHVTGDMAS 300

Query: 541 KRDEIKRGGYPVRERYGNGGGSGGNYRGRDRFGGRQGYRA-GGTRVEKWKHDLFHEANRS 600
           KRDE+KRGG             GGNYRGRDRFGGRQGY A GGTRVEKWKHDLFHEANRS
Sbjct: 301 KRDEMKRGG-------------GGNYRGRDRFGGRQGYPASGGTRVEKWKHDLFHEANRS 326

Query: 601 PTPKNEEDQIAKVEALLAS 617
           PTPKNEE QIAKVEALLAS
Sbjct: 361 PTPKNEEAQIAKVEALLAS 326

[Close]

BLAST of Sgr029896 vs. ExPASy TrEMBL
Match: A0A0A0KV12 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G000750 PE=4 SV=1)

HSP 1 Score: 478.4 bits (1230), Expect = 4.5e-131
Identity = 278/379 (73.35%), Postives = 294/379 (77.57%), Query Frame = 0


Query: 241 MSRREARESDSKRYRSRFDREPSPKRSRRDRKPLDDKLSRNSDRKPLDEKLSRDSDRKPL 300
           MSRREARESDSKR+RSRFDREPSPKRS+R                               
Sbjct: 1   MSRREARESDSKRHRSRFDREPSPKRSKR------------------------------- 60

Query: 301 DEKLSRDSDRKPLDEKLSRNSSSHVEDNKDRDQKHELCHRGQDMIPHESSLTLDSKPEGG 360
                   DRK L+EKLSRNSSSHVEDNK+RDQKHEL   GQDMIPHESSL L+SKPEGG
Sbjct: 61  --------DRKTLEEKLSRNSSSHVEDNKERDQKHELRLVGQDMIPHESSLALESKPEGG 120

Query: 361 VVSKEANRNSDGRDGGTKHSLNPTEVPRSRSYFQHDERGNAGQVGRSFGWSATSERGWWK 420
                ANRNSDGRDGGTKHS+NPTEVPRSRSYFQHDER NAGQVGRSFG SATSERGWWK
Sbjct: 121 -AGIGANRNSDGRDGGTKHSVNPTEVPRSRSYFQHDERSNAGQVGRSFGRSATSERGWWK 180

Query: 421 DSK--DQDNDRASGKTATYNSQQRDEIPQTMREDNHTRHRDASSKLEVDAPAPARKRPAF 480
           DSK  D+D+DRASGK+ TY SQQRDE PQ  RED   RH D SSKLEVDA  PARKRPAF
Sbjct: 181 DSKDPDKDSDRASGKSLTYKSQQRDEKPQAARED---RHHDGSSKLEVDALTPARKRPAF 240

Query: 481 REKKITVDSVNVEKAAMASESKKSSDPHHPQDGREWREGRGRDTRYSEKL-YKHVTGDMA 540
           REKKITVD+ + EK AM  ESKKS+D H  Q+GRE RE RGRD RYSEKL  KH  GDMA
Sbjct: 241 REKKITVDNEDGEKVAMVPESKKSNDLHQIQEGRERREERGRDPRYSEKLNNKHSNGDMA 300

Query: 541 TKRDEIKRGGYPVRERYGNGGGSGGNYRGRDRFGGRQGYRAGGTRVEKWKHDLFHEANRS 600
           +KRDE+KR GYPVRERYGNG G GGNYRGRDRFGGRQGYR  GTRVEKWKHDLFHEANRS
Sbjct: 301 SKRDEMKRVGYPVRERYGNGSG-GGNYRGRDRFGGRQGYRTSGTRVEKWKHDLFHEANRS 335

Query: 601 PTPKNEEDQIAKVEALLAS 617
           PTPKNEEDQIAKVEALL+S
Sbjct: 361 PTPKNEEDQIAKVEALLSS 335

[Close]

BLAST of Sgr029896 vs. TAIR 10
Match: AT3G19650.1 (cyclin-related )

HSP 1 Score: 124.8 bits (312), Expect = 2.4e-28
Identity = 138/380 (36.32%), Postives = 178/380 (46.84%), Query Frame = 0


Query: 242 SRREARESDSKRYRSRFDREPSPKRSRRDRKPLDDKLSRNSDRKPLDEKLSRDSDRKPLD 301
           +RRE+R+SD +R+RSR DREPSPKRSRRD KP   +  R   +K LD +   D+      
Sbjct: 3   TRRESRDSDPRRHRSRIDREPSPKRSRRDGKP---EAERVLSKKDLDVRDGTDT------ 62

Query: 302 EKLSRDSDRKPLDEKLSRNSSSHVEDNKDRDQKHELCHRGQDMIPHESSLTLDSKPEGGV 361
           EK SR S R   D  L  ++       KD ++KH   H      PH S            
Sbjct: 63  EKNSRQSLR---DAPLELDAHG---SRKDSEKKHSGHHETTKAAPHLS------------ 122

Query: 362 VSKEANRNSDGRDGGTKHSLNPTEVPRSRSYFQHDERGNAGQVGRSFGWSATSERGWWKD 421
                                  +VPRSR Y QHD+R + G+V R      TS RG W+ 
Sbjct: 123 -----------------------QVPRSRPYSQHDDRRSDGKVDR----RPTSVRGSWRS 182

Query: 422 SKDQDNDRASGKTATYNSQQRDEIPQTMREDNHTRHRDASSKLEVDAPAPARKRPAFREK 481
           S+DQ N RA       +  ++DE   + R D      D    L       +RKRPAFREK
Sbjct: 183 SRDQSNRRAGDDEK--SQHRKDEDKSSWRHDRFRESDDTQGAL-------SRKRPAFREK 242

Query: 482 KITVDSVNVEKAAMASESKKSSDPHHPQDGREWREGRGRDTRYSEKLYKHVTG-DMATKR 541
           KI  ++ N        + K ++  +  Q+ R W     R   +SE+  +   G D    R
Sbjct: 243 KIAEETGNNTDRTRTEDGKDTNLNNRRQNERNW-----RSNTHSERHERPAMGRDRVWNR 302

Query: 542 DEIKRGGYPVRERYGNGGGSGGNYRG-RDRF--GGRQGYRAGGTRVE-KWKHDLFHEANR 601
           D+         ER   G GS  +Y+  RDRF   GR G+    TR E KW HDLF EAN+
Sbjct: 303 DD---------ER---GAGSRQSYQADRDRFNGNGRSGFSGSWTRNEKKWDHDLFDEANK 302

Query: 602 SPTPKNEEDQIAKVEALLAS 617
           SP    EE+QIAKVEALLAS
Sbjct: 363 SPAKATEEEQIAKVEALLAS 302

The following BLAST results are available for this feature:

BLAST of Sgr029896 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6576912.1	1.9e-176	69.13	hypothetical protein SDJN03_24486, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_023548006.1	4.3e-144	77.57	pre-mRNA-splicing factor CWC25-like [Cucurbita pepo subsp. pepo] >XP_023548014.1...	[more]
XP_022942670.1	1.2e-143	77.31	pre-mRNA-splicing factor CWC25-like isoform X1 [Cucurbita moschata] >XP_02294267...	[more]
KAG6600285.1	3.6e-143	77.04	hypothetical protein SDJN03_05518, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022984546.1	1.4e-142	77.04	pre-mRNA-splicing factor CWC25 isoform X1 [Cucurbita maxima]	[more]

BLAST of Sgr029896 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Sgr029896 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FPJ0	6.0e-144	77.31	pre-mRNA-splicing factor CWC25-like isoform X1 OS=Cucurbita moschata OX=3662 GN=...	[more]
A0A6J1J5K1	6.7e-143	77.04	pre-mRNA-splicing factor CWC25 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC1114...	[more]
A0A6J1FQX4	3.6e-136	74.41	pre-mRNA-splicing factor CWC25-like isoform X2 OS=Cucurbita moschata OX=3662 GN=...	[more]
A0A6J1JAV5	3.9e-135	74.14	pre-mRNA-splicing factor CWC25 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC1114...	[more]
A0A0A0KV12	4.5e-131	73.35	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G000750 PE=4 SV=1	[more]

BLAST of Sgr029896 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G19650.1	2.4e-28	36.32	cyclin-related	[more]

InterPro

Analysis Name: InterPro Annotations of Monk fruit (Qingpiguo) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 497..549
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 245..606
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 62..76
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 36..61
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 580..606
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 36..76
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 445..487
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 245..343
None	No IPR available	PANTHER	PTHR36364	OS03G0203000 PROTEIN	coord: 241..308 coord: 303..616

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sgr029896.1	Sgr029896.1	mRNA