Sgr017050.1 (mRNA) Monk fruit (Qingpiguo) v1

Overview


Name	Sgr017050.1
Type	mRNA
Organism	Siraitia grosvenorii (Monk fruit (Qingpiguo) v1)
Description	CUE domain-containing protein 1
Location	tig00153017: 1120268 .. 1122096 (-)
Sequence length	762
RNA-Seq Expression	Sgr017050.1
Synteny	Sgr017050.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATTGAAAGTGAAAAATGGGTTGGAAGACAAATGTATGAAGAAAAATATTTGGCACATTGAATGTTCAAAGTCTCTTAAGTTAAGGACATAATCTTGTCTTATTGCCATTTTCTACCAAAAGACTTAGACAAATCTTTGGGATATGCAATTGGGTCACTTGTCAAGAGCTTAACAATTGACTTCAATTTCAAAAAGACTTCGGAAAAAAAAAAAGTGACAAATTATGCATGCTTTAATTAGCAATAAAAGTATGTGTCTTCAATATTCATAATTACAATTGTTTCATTTTTTTAAATTATTTTTTTCCTAGATTTGAACTTCTAGTATAAAATTTTTATTGACCGCTAGAGATTGGCTTGGCCTAATAATTATTAGAGCAAGCATAAAAGTAAAGAAACTTTGGGAGAATGAGTTTCGGACCTATGATGGGTACCATAAGATATCAAAATCTTACAAGTAAGTTGAAACCGGATAAAATTACATATTAAGAGTTTTTTTTTCTCATTTTAAGAATATGTATATTTAATTTGTTTTCTATTTTTTTTAAAACGTTTAACTTAGCCAATTTTAAGAAAATTAAAATTGATTTTTGAGAACTAACGTTGTTTTATTTTATTATAATTATTGTTATCCATACTCTTAATTTCCTTGCAAACAATCCTTAAAAAGTAATCTTAAAATAAAAATTAATTTATGAAAGGAAATAATATTTAGTGCCCAATTCACATCCATTAATTTTTTTTAAAAAAATTAACTTATTACTCACAATTTCTTTTTCTCTTATTCTACTTTTTAAAAACATTTTTAAAATCCAATTCAAAATTTAAAAGCTAAAAAAAATAGTTTTCAAAAACTTATTTTTAGTTTTAAAATTTGTCTAGAAATTCAAATGCCCAAATTTTTTAAATTAAAAAATCAAAATCAAAATCGTTATTCAACCTGATGATAATAAATTTTTTTAGAAAAATTGGAAATTAAAACCATATTTGAAAAAAGGTGGAAGAGAAAAGTCACTTACCATTTCCATTTCCATTTCCATTTCCAGATTCCTGCGAGTTAGCTGCACCTCTGGTGAAGCGCGCGTAGCATTTGGCCAAGTACACATCCCCCCAAGCGGATGGCCCACAGGCAGATTTCAGCCGTCCGATGGCCTCAGAGATGCAATCCTGGCAATCGCTCGGACTCAAATCCCCCACGCACTGCGCCGTGCTCTGTACTTCCCCGGCTCCACCCACCCTGTAGGTCCCACCACCCGTCGCCAAATACCCCAGCGCCGCATCAAGCCGGGTCAACGCGTCCGAGTCAGACCCAATCGACGGCCCACATTTCCTCACCACCACCGTCTTGTCCTCCACTCCGAAGAAGCTTCTGTTATCGTACTTGATGAAGCACCCCTCCAGCTGCAACGCGCCGCCGCATGCGTCGGTGCAAACAGTCCCCAGTCGACTCACCGCCCCGGCGACGCACCGCGAGCAGTCGCCGTAGTTGAGGTCCCCGCGGCATTGGTAGAGCCCGGAGATGGTGTACTGTGGGGCGGAGCCGACGACAGTGAAGTTGCCGTAGGAGGCGGAAGCCGCCGAGCTTACAAGGCGGCCGAGGAGCAAGTTCAGGTTCGAATCGTACGGTGACCCCGGAATGTATTTCTGCAGAGTACACCCACCGAACACGAAGCTGTCTATGGAAGAAGACGACGGAGCTGTGAGAATTACGACAGCTCCATAGAAAAACGTCAGAAAAGAAGACAGAGAACGAACTCTTCCACTCGCCGACATGTCGAAATAGAGAGAGAGAGCTTTCGCAGAGAATTTACGTGGAGAAGACGATGA

mRNA sequence

ATGATTGAAAGTGAAAAATGGGTTGGAAGACAAATCTGCACCTCTGGTGAAGCGCGCGTAGCATTTGGCCAAGTACACATCCCCCCAAGCGGATGGCCCACAGGCAGATTTCAGCCGTCCGATGGCCTCAGAGATGCAATCCTGGCAATCGCTCGGACTCAAATCCCCCACGCACTGCGCCGTGCTCTGTACTTCCCCGGCTCCACCCACCCTGTAGGTCCCACCACCCGTCGCCAAATACCCCAGCGCCGCATCAAGCCGGGTCAACGCGTCCGAGTCAGACCCAATCGACGGCCCACATTTCCTCACCACCACCGTCTTGTCCTCCACTCCGAAGAAGCTTCTGTTATCGTACTTGATGAAGCACCCCTCCAGCTGCAACGCGCCGCCGCATGCGTCGGTGCAAACAGTCCCCAGTCGACTCACCGCCCCGGCGACGCACCGCGAGCAGTCGCCGTAGTTGAGGTCCCCGCGGCATTGGTAGAGCCCGGAGATGGTGTACTGTGGGGCGGAGCCGACGACAGTGAAGTTGCCGTAGGAGGCGGAAGCCGCCGAGCTTACAAGGCGGCCGAGGAGCAAGTTCAGAGTACACCCACCGAACACGAAGCTGTCTATGGAAGAAGACGACGGAGCTGTGAGAATTACGACAGCTCCATAGAAAAACGTCAGAAAAGAAGACAGAGAACGAACTCTTCCACTCGCCGACATGTCGAAATAGAGAGAGAGAGCTTTCGCAGAGAATTTACGTGGAGAAGACGATGA

Coding sequence (CDS)

ATGATTGAAAGTGAAAAATGGGTTGGAAGACAAATCTGCACCTCTGGTGAAGCGCGCGTAGCATTTGGCCAAGTACACATCCCCCCAAGCGGATGGCCCACAGGCAGATTTCAGCCGTCCGATGGCCTCAGAGATGCAATCCTGGCAATCGCTCGGACTCAAATCCCCCACGCACTGCGCCGTGCTCTGTACTTCCCCGGCTCCACCCACCCTGTAGGTCCCACCACCCGTCGCCAAATACCCCAGCGCCGCATCAAGCCGGGTCAACGCGTCCGAGTCAGACCCAATCGACGGCCCACATTTCCTCACCACCACCGTCTTGTCCTCCACTCCGAAGAAGCTTCTGTTATCGTACTTGATGAAGCACCCCTCCAGCTGCAACGCGCCGCCGCATGCGTCGGTGCAAACAGTCCCCAGTCGACTCACCGCCCCGGCGACGCACCGCGAGCAGTCGCCGTAGTTGAGGTCCCCGCGGCATTGGTAGAGCCCGGAGATGGTGTACTGTGGGGCGGAGCCGACGACAGTGAAGTTGCCGTAGGAGGCGGAAGCCGCCGAGCTTACAAGGCGGCCGAGGAGCAAGTTCAGAGTACACCCACCGAACACGAAGCTGTCTATGGAAGAAGACGACGGAGCTGTGAGAATTACGACAGCTCCATAGAAAAACGTCAGAAAAGAAGACAGAGAACGAACTCTTCCACTCGCCGACATGTCGAAATAGAGAGAGAGAGCTTTCGCAGAGAATTTACGTGGAGAAGACGATGA

Protein sequence

MIESEKWVGRQICTSGEARVAFGQVHIPPSGWPTGRFQPSDGLRDAILAIARTQIPHALRRALYFPGSTHPVGPTTRRQIPQRRIKPGQRVRVRPNRRPTFPHHHRLVLHSEEASVIVLDEAPLQLQRAAACVGANSPQSTHRPGDAPRAVAVVEVPAALVEPGDGVLWGGADDSEVAVGGGSRRAYKAAEEQVQSTPTEHEAVYGRRRRSCENYDSSIEKRQKRRQRTNSSTRRHVEIERESFRREFTWRRR

Homology

[Close]

BLAST of Sgr017050.1 vs. NCBI nr
Match: KYP75953.1 (hypothetical protein KK1_020165 [Cajanus cajan])

HSP 1 Score: 107.1 bits (266), Expect = 2.3e-19
Identity = 81/180 (45.00%), Postives = 94/180 (52.22%), Query Frame = 0


Query: 17  EARVAFGQVHIPPSGWPTGRFQPSDGLRDAILAIARTQIPHALRRALYFPGSTHPVGPTT 76
           E  V  G+ HIP  G  T   QPSDGL  AIL +A+TQIP  LR A +    T+P  P  
Sbjct: 7   EPGVTLGEEHIPIIGDRTVAPQPSDGLPHAILTLAKTQIPATLRHAPHLTRPTNPKVPAR 66

Query: 77  RRQIPQRRIKPGQRVRVRPN-RRPTFPHHHRLVLHSEEASVIVLDEAPLQLQRAAACVGA 136
            RQ  Q R+      R  PN  RPT   HHRLVL  E+  V+VL  APLQL RAAA   A
Sbjct: 67  TRQPAQHRV---PLARTGPNGPRPTLLQHHRLVLQPEKRVVVVLHVAPLQLHRAAARRRA 126

Query: 137 NSPQSTHRPGDAPRAVAVVEVPAALVEPGDGVLWGGADDSEVAVGGGSRRAYKAAEEQVQ 196
             P +     DA  A+   EV AALVE    V   GA   EV VGG   R  +  EE+V+
Sbjct: 127 ELPGALDGARDAGGALRHGEVAAALVEAVGHVGGAGAHHGEVVVGGVRGRVDQRGEERVE 183

[Close]

BLAST of Sgr017050.1 vs. NCBI nr
Match: GER29805.1 (CUE domain-containing protein 1 [Striga asiatica])

HSP 1 Score: 91.3 bits (225), Expect = 1.3e-14
Identity = 63/155 (40.65%), Postives = 78/155 (50.32%), Query Frame = 0


Query: 19  RVAFGQVHIPPSGWPTGRFQPSDGLRDAILAIARTQIPHALRRALYFPGSTHPVGPTTRR 78
           RVA  + HIPP        QP DGLR A LA+A TQIP ALR   + P   HP     RR
Sbjct: 5   RVALSKKHIPPQRGRALVPQPLDGLRHAALALAPTQIPRALRHTPHLPRHPHPEILPPRR 64

Query: 79  QIPQRRIKPGQRVRVRPNRRPTFPHHHRLVLHSEEASVIVLDEAPLQLQRAAACVGANSP 138
           Q+ Q  + P + V    + RPT    HR +L   E  V+V  EA ++LQ  A   GA   
Sbjct: 65  QVRQHAVLPREHVPAGGHGRPTSVGRHRPILLPHEGRVVVPHEAAVELQGGAGGPGAGGG 124

Query: 139 QSTHRPGDAPRAVAVVEVPAALV-----EPGDGVL 169
           ++    G+AP AV   EV AAL      EPG  +L
Sbjct: 125 EAGDGGGNAPPAVGAGEVSAALTASPGPEPGTEIL 159

[Close]

BLAST of Sgr017050.1 vs. NCBI nr
Match: PON33852.1 (LOW QUALITY PROTEIN: hypothetical protein PanWU01x14_349250 [Parasponia andersonii])

HSP 1 Score: 70.1 bits (170), Expect = 3.1e-08
Identity = 33/62 (53.23%), Postives = 41/62 (66.13%), Query Frame = 0


Query: 14  TSGEARVAFGQVHIPPSGWPTGRFQPSDGLRDAILAIARTQIPHALRRALYFPGSTHPVG 73
           T  E RVA GQVH+ P G PT   QP D +R+AILA+   Q+PHALR  L+ PG+  PV 
Sbjct: 39  TFREPRVALGQVHVTPGGGPTIGPQPLDRIREAILALGWAQVPHALRHPLHVPGAADPVQ 98

Query: 74  PT 76
           P+
Sbjct: 99  PS 100

[Close]

BLAST of Sgr017050.1 vs. NCBI nr
Match: PON47772.1 (hypothetical protein TorRG33x02_322240 [Trema orientale])

HSP 1 Score: 68.2 bits (165), Expect = 1.2e-07
Identity = 33/61 (54.10%), Postives = 39/61 (63.93%), Query Frame = 0


Query: 14 TSGEARVAFGQVHIPPSGWPTGRFQPSDGLRDAILAIARTQIPHALRRALYFPGSTHPVG 73
          T  E RVA GQVH+ P G PT   QP D +R+AILA+   Q+PHALR  L  PG+  PV 
Sbjct: 39 TFREPRVALGQVHVTPGGGPTIGPQPLDRVREAILALGWAQVPHALRHPLQVPGAADPVQ 98

Query: 74 P 75
          P
Sbjct: 99 P 99

[Close]

BLAST of Sgr017050.1 vs. ExPASy TrEMBL
Match: A0A151U9H3 (Uncharacterized protein OS=Cajanus cajan OX=3821 GN=KK1_020165 PE=4 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 1.1e-19
Identity = 81/180 (45.00%), Postives = 94/180 (52.22%), Query Frame = 0


Query: 17  EARVAFGQVHIPPSGWPTGRFQPSDGLRDAILAIARTQIPHALRRALYFPGSTHPVGPTT 76
           E  V  G+ HIP  G  T   QPSDGL  AIL +A+TQIP  LR A +    T+P  P  
Sbjct: 7   EPGVTLGEEHIPIIGDRTVAPQPSDGLPHAILTLAKTQIPATLRHAPHLTRPTNPKVPAR 66

Query: 77  RRQIPQRRIKPGQRVRVRPN-RRPTFPHHHRLVLHSEEASVIVLDEAPLQLQRAAACVGA 136
            RQ  Q R+      R  PN  RPT   HHRLVL  E+  V+VL  APLQL RAAA   A
Sbjct: 67  TRQPAQHRV---PLARTGPNGPRPTLLQHHRLVLQPEKRVVVVLHVAPLQLHRAAARRRA 126

Query: 137 NSPQSTHRPGDAPRAVAVVEVPAALVEPGDGVLWGGADDSEVAVGGGSRRAYKAAEEQVQ 196
             P +     DA  A+   EV AALVE    V   GA   EV VGG   R  +  EE+V+
Sbjct: 127 ELPGALDGARDAGGALRHGEVAAALVEAVGHVGGAGAHHGEVVVGGVRGRVDQRGEERVE 183

[Close]

BLAST of Sgr017050.1 vs. ExPASy TrEMBL
Match: A0A5A7PAB7 (CUE domain-containing protein 1 OS=Striga asiatica OX=4170 GN=STAS_05698 PE=4 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 6.3e-15
Identity = 63/155 (40.65%), Postives = 78/155 (50.32%), Query Frame = 0


Query: 19  RVAFGQVHIPPSGWPTGRFQPSDGLRDAILAIARTQIPHALRRALYFPGSTHPVGPTTRR 78
           RVA  + HIPP        QP DGLR A LA+A TQIP ALR   + P   HP     RR
Sbjct: 5   RVALSKKHIPPQRGRALVPQPLDGLRHAALALAPTQIPRALRHTPHLPRHPHPEILPPRR 64

Query: 79  QIPQRRIKPGQRVRVRPNRRPTFPHHHRLVLHSEEASVIVLDEAPLQLQRAAACVGANSP 138
           Q+ Q  + P + V    + RPT    HR +L   E  V+V  EA ++LQ  A   GA   
Sbjct: 65  QVRQHAVLPREHVPAGGHGRPTSVGRHRPILLPHEGRVVVPHEAAVELQGGAGGPGAGGG 124

Query: 139 QSTHRPGDAPRAVAVVEVPAALV-----EPGDGVL 169
           ++    G+AP AV   EV AAL      EPG  +L
Sbjct: 125 EAGDGGGNAPPAVGAGEVSAALTASPGPEPGTEIL 159

[Close]

BLAST of Sgr017050.1 vs. ExPASy TrEMBL
Match: A0A2N9EUC3 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS10268 PE=4 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 2.8e-10
Identity = 53/118 (44.92%), Postives = 63/118 (53.39%), Query Frame = 0


Query: 82  QRRIKPGQRVRVRPNRRPTFPHHHRLVLHSEEASVIVLDEAPLQLQRAAACVGANSPQST 141
           Q  I P Q VRV PNRR TF  H  LVLH+++ SVI+ DE   +LQRA   V A   + T
Sbjct: 11  QHSISPSQHVRVIPNRRSTFLDHLGLVLHTQKRSVIIFDETAFELQRATERVDAEGAELT 70

Query: 142 HRPGDAPRAVAVVEVPAALVEPGDGVLWG-GADDSEVAVGGGSRRAYKAAEEQVQSTP 199
           H   DA  A+   EV AAL E  +GVLW   + D EV V   S  A   A     +TP
Sbjct: 71  HCESDAVSAIVSHEVAAALEESVEGVLWACDSWDGEVIVETSSPMAILQAPATNPATP 128

[Close]

BLAST of Sgr017050.1 vs. ExPASy TrEMBL
Match: A0A2P5ABD0 (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_349250 PE=4 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 1.5e-08
Identity = 33/62 (53.23%), Postives = 41/62 (66.13%), Query Frame = 0


Query: 14  TSGEARVAFGQVHIPPSGWPTGRFQPSDGLRDAILAIARTQIPHALRRALYFPGSTHPVG 73
           T  E RVA GQVH+ P G PT   QP D +R+AILA+   Q+PHALR  L+ PG+  PV 
Sbjct: 39  TFREPRVALGQVHVTPGGGPTIGPQPLDRIREAILALGWAQVPHALRHPLHVPGAADPVQ 98

Query: 74  PT 76
           P+
Sbjct: 99  PS 100

[Close]

BLAST of Sgr017050.1 vs. ExPASy TrEMBL
Match: A0A2P5BG69 (Uncharacterized protein OS=Trema orientale OX=63057 GN=TorRG33x02_322240 PE=4 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 5.8e-08
Identity = 33/61 (54.10%), Postives = 39/61 (63.93%), Query Frame = 0


Query: 14 TSGEARVAFGQVHIPPSGWPTGRFQPSDGLRDAILAIARTQIPHALRRALYFPGSTHPVG 73
          T  E RVA GQVH+ P G PT   QP D +R+AILA+   Q+PHALR  L  PG+  PV 
Sbjct: 39 TFREPRVALGQVHVTPGGGPTIGPQPLDRVREAILALGWAQVPHALRHPLQVPGAADPVQ 98

Query: 74 P 75
          P
Sbjct: 99 P 99

The following BLAST results are available for this feature:

BLAST of Sgr017050.1 vs. NCBI nr


Match Name	E-value	Identity	Description
KYP75953.1	2.3e-19	45.00	hypothetical protein KK1_020165 [Cajanus cajan]	[more]
GER29805.1	1.3e-14	40.65	CUE domain-containing protein 1 [Striga asiatica]	[more]
PON33852.1	3.1e-08	53.23	LOW QUALITY PROTEIN: hypothetical protein PanWU01x14_349250 [Parasponia anderson...	[more]
PON47772.1	1.2e-07	54.10	hypothetical protein TorRG33x02_322240 [Trema orientale]	[more]

BLAST of Sgr017050.1 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Sgr017050.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A151U9H3	1.1e-19	45.00	Uncharacterized protein OS=Cajanus cajan OX=3821 GN=KK1_020165 PE=4 SV=1	[more]
A0A5A7PAB7	6.3e-15	40.65	CUE domain-containing protein 1 OS=Striga asiatica OX=4170 GN=STAS_05698 PE=4 SV...	[more]
A0A2N9EUC3	2.8e-10	44.92	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS10268 PE=4 SV=1	[more]
A0A2P5ABD0	1.5e-08	53.23	Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_349250 PE...	[more]
A0A2P5BG69	5.8e-08	54.10	Uncharacterized protein OS=Trema orientale OX=63057 GN=TorRG33x02_322240 PE=4 SV...	[more]

BLAST of Sgr017050.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Monk fruit (Qingpiguo) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 214..237

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Sgr017050	Sgr017050	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sgr017050.1.exon3	Sgr017050.1.exon3	exon
Sgr017050.1.exon2	Sgr017050.1.exon2	exon
Sgr017050.1.exon1	Sgr017050.1.exon1	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
cds.Sgr017050.1	cds.Sgr017050.1_3	CDS
cds.Sgr017050.1	cds.Sgr017050.1_2	CDS
cds.Sgr017050.1	cds.Sgr017050.1	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Sgr017050.1	Sgr017050.1-protein	polypeptide