Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGTTGGTGGTGCAAAATTTGACTGGCTCTTTGTTCTTCGTCCAGGTTGAAGACGATGCTACTGTTTGTGATCTTAGAACTCAAATCACTGCTCACCAACACAACCTCCCTTCTCACCGTTTAATCTTCATTCCCGACCACAATCCTCAACGTCTGATCTCCCAGGCCGATGATGGAATCTCACTAGTTGATTTTGGCTTACGTGATGGGTCCCACATTTACATCTTTTTTTGTCCCCTTGATGACGATGATGGTGATGATATTGAAGCTCGCCGATTCTTCCTTACTTCTCCCGATCTTCTTCTCTTCTAA
mRNA sequence
ATGAAGTTGGTGGTGCAAAATTTGACTGGCTCTTTGTTCTTCGTCCAGGTTGAAGACGATGCTACTGTTTGTGATCTTAGAACTCAAATCACTGCTCACCAACACAACCTCCCTTCTCACCGTTTAATCTTCATTCCCGACCACAATCCTCAACGTCTGATCTCCCAGGCCGATGATGGAATCTCACTAGTTGATTTTGGCTTACGTGATGGGTCCCACATTTACATCTTTTTTTGTCCCCTTGATGACGATGATGGTGATGATATTGAAGCTCGCCGATTCTTCCTTACTTCTCCCGATCTTCTTCTCTTCTAA
Coding sequence (CDS)
ATGAAGTTGGTGGTGCAAAATTTGACTGGCTCTTTGTTCTTCGTCCAGGTTGAAGACGATGCTACTGTTTGTGATCTTAGAACTCAAATCACTGCTCACCAACACAACCTCCCTTCTCACCGTTTAATCTTCATTCCCGACCACAATCCTCAACGTCTGATCTCCCAGGCCGATGATGGAATCTCACTAGTTGATTTTGGCTTACGTGATGGGTCCCACATTTACATCTTTTTTTGTCCCCTTGATGACGATGATGGTGATGATATTGAAGCTCGCCGATTCTTCCTTACTTCTCCCGATCTTCTTCTCTTCTAA
Protein sequence
MKLVVQNLTGSLFFVQVEDDATVCDLRTQITAHQHNLPSHRLIFIPDHNPQRLISQADDGISLVDFGLRDGSHIYIFFCPLDDDDGDDIEARRFFLTSPDLLLF
Homology
BLAST of PI0012754.1 vs. ExPASy TrEMBL
Match:
A0A0A0K6V6 (Ubiquitin-like domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G044270 PE=4 SV=1)
HSP 1 Score: 186.8 bits (473), Expect = 4.6e-44
Identity = 95/107 (88.79%), Postives = 97/107 (90.65%), Query Frame = 0
Query: 1 MKLVVQNLTGSLFFVQVEDDATVCDLRTQITA--HQHNLPSHRLIFIPDHNPQRLISQAD 60
MKLVVQNLTGSLFFV+VEDDATV DLRTQI A HQHNLPSHRLIFIPDHNP+RLISQ D
Sbjct: 1 MKLVVQNLTGSLFFVEVEDDATVSDLRTQINAHPHQHNLPSHRLIFIPDHNPERLISQVD 60
Query: 61 DGISLVDFGLRDGSHIYIFFCPLDDDDGDDIEARRFFLT-SPDLLLF 105
DGISLVDFGLRDGSHIYIFF PL DDDGDDIEARRFF T S DLLLF
Sbjct: 61 DGISLVDFGLRDGSHIYIFFSPLHDDDGDDIEARRFFFTSSSDLLLF 107
BLAST of PI0012754.1 vs. ExPASy TrEMBL
Match:
A0A6J1JPI4 (uncharacterized protein LOC111486561 OS=Cucurbita maxima OX=3661 GN=LOC111486561 PE=4 SV=1)
HSP 1 Score: 155.2 bits (391), Expect = 1.5e-34
Identity = 75/104 (72.12%), Postives = 89/104 (85.58%), Query Frame = 0
Query: 1 MKLVVQNLTGSLFFVQVEDDATVCDLRTQITAHQHNLPSHRLIFIPDHNPQRLISQADDG 60
MKLV +NLTGSLF+V+V+D ATV DLRT+I++ Q +LPS RL+F+PDH+ RLIS ADDG
Sbjct: 1 MKLVAENLTGSLFYVEVDDGATVLDLRTEISS-QQSLPSDRLLFVPDHDRGRLISVADDG 60
Query: 61 ISLVDFGLRDGSHIYIFFCPLDDDDGDDIEARRFFLTSPDLLLF 105
ISLVDFGLRDGS IYIFFCPLDDD GDD++AR+ F PDLLLF
Sbjct: 61 ISLVDFGLRDGSLIYIFFCPLDDDGGDDVDARQLFFNCPDLLLF 103
BLAST of PI0012754.1 vs. ExPASy TrEMBL
Match:
A0A6J1ERN4 (uncharacterized protein LOC111437093 OS=Cucurbita moschata OX=3662 GN=LOC111437093 PE=4 SV=1)
HSP 1 Score: 146.4 bits (368), Expect = 6.8e-32
Identity = 70/104 (67.31%), Postives = 87/104 (83.65%), Query Frame = 0
Query: 1 MKLVVQNLTGSLFFVQVEDDATVCDLRTQITAHQHNLPSHRLIFIPDHNPQRLISQADDG 60
MKLV +NLTGSLF+V+V+D ATV DLRT+I++ Q +LPS RL+F+PDH+ RLIS ADDG
Sbjct: 1 MKLVAENLTGSLFYVEVDDGATVLDLRTEISS-QQSLPSDRLLFVPDHDRGRLISAADDG 60
Query: 61 ISLVDFGLRDGSHIYIFFCPLDDDDGDDIEARRFFLTSPDLLLF 105
SLVDFGLRDGS IY+FFCPLD++ DD++AR+ F PDLLLF
Sbjct: 61 TSLVDFGLRDGSLIYVFFCPLDEEGVDDLDARQLFFNCPDLLLF 103
BLAST of PI0012754.1 vs. ExPASy TrEMBL
Match:
A0A6J1C3E5 (uncharacterized protein LOC111007894 OS=Momordica charantia OX=3673 GN=LOC111007894 PE=4 SV=1)
HSP 1 Score: 126.7 bits (317), Expect = 5.6e-26
Identity = 68/114 (59.65%), Postives = 81/114 (71.05%), Query Frame = 0
Query: 1 MKLVVQNLTGSLFFVQVEDDATVCDLRTQITAHQHN-LPSHRLIFIPDHNPQRLISQADD 60
MKL V+NLTGSLF +QV+DDATV DL+ +I+AH +N LPS RLIFI D NP R IS+ DD
Sbjct: 1 MKLAVENLTGSLFHIQVKDDATVSDLKAEISAHHNNDLPSDRLIFIADDNPGRPISKDDD 60
Query: 61 GISLVDFGLRDGSHIYIFFCPLD---------DDDGDDIEARRFFLTSPDLLLF 105
G SLVD G++DGSHIYIFF PLD DD D +R FF T ++LLF
Sbjct: 61 GFSLVDCGVKDGSHIYIFFHPLDHEDDRDHGGDDPDQDHHSRLFFFTCHNILLF 114
BLAST of PI0012754.1 vs. ExPASy TrEMBL
Match:
A0A5D3BP45 (Phosphoglucan phosphatase LSF1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1545G00410 PE=4 SV=1)
HSP 1 Score: 122.5 bits (306), Expect = 1.1e-24
Identity = 57/72 (79.17%), Postives = 63/72 (87.50%), Query Frame = 0
Query: 27 RTQITAHQHNLPSHRLIFIPDHNPQRLISQADDGISLVDFGLRDGSHIYIFFCPLDDDDG 86
RTQI AHQ NLPSH LIFI DH+P+RLIS+ DD ISLVDFGL DGS+IYIFFCPLD+D G
Sbjct: 575 RTQIIAHQRNLPSHCLIFILDHDPERLISEVDDKISLVDFGLHDGSNIYIFFCPLDNDGG 634
Query: 87 DDIEARRFFLTS 99
DDIEARRFF T+
Sbjct: 635 DDIEARRFFFTT 646
BLAST of PI0012754.1 vs. NCBI nr
Match:
KGN43536.1 (hypothetical protein Csa_020453 [Cucumis sativus])
HSP 1 Score: 186.8 bits (473), Expect = 9.4e-44
Identity = 95/107 (88.79%), Postives = 97/107 (90.65%), Query Frame = 0
Query: 1 MKLVVQNLTGSLFFVQVEDDATVCDLRTQITA--HQHNLPSHRLIFIPDHNPQRLISQAD 60
MKLVVQNLTGSLFFV+VEDDATV DLRTQI A HQHNLPSHRLIFIPDHNP+RLISQ D
Sbjct: 1 MKLVVQNLTGSLFFVEVEDDATVSDLRTQINAHPHQHNLPSHRLIFIPDHNPERLISQVD 60
Query: 61 DGISLVDFGLRDGSHIYIFFCPLDDDDGDDIEARRFFLT-SPDLLLF 105
DGISLVDFGLRDGSHIYIFF PL DDDGDDIEARRFF T S DLLLF
Sbjct: 61 DGISLVDFGLRDGSHIYIFFSPLHDDDGDDIEARRFFFTSSSDLLLF 107
BLAST of PI0012754.1 vs. NCBI nr
Match:
XP_022989504.1 (uncharacterized protein LOC111486561 [Cucurbita maxima])
HSP 1 Score: 155.2 bits (391), Expect = 3.0e-34
Identity = 75/104 (72.12%), Postives = 89/104 (85.58%), Query Frame = 0
Query: 1 MKLVVQNLTGSLFFVQVEDDATVCDLRTQITAHQHNLPSHRLIFIPDHNPQRLISQADDG 60
MKLV +NLTGSLF+V+V+D ATV DLRT+I++ Q +LPS RL+F+PDH+ RLIS ADDG
Sbjct: 1 MKLVAENLTGSLFYVEVDDGATVLDLRTEISS-QQSLPSDRLLFVPDHDRGRLISVADDG 60
Query: 61 ISLVDFGLRDGSHIYIFFCPLDDDDGDDIEARRFFLTSPDLLLF 105
ISLVDFGLRDGS IYIFFCPLDDD GDD++AR+ F PDLLLF
Sbjct: 61 ISLVDFGLRDGSLIYIFFCPLDDDGGDDVDARQLFFNCPDLLLF 103
BLAST of PI0012754.1 vs. NCBI nr
Match:
KAG6589175.1 (hypothetical protein SDJN03_17740, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 147.9 bits (372), Expect = 4.8e-32
Identity = 71/104 (68.27%), Postives = 87/104 (83.65%), Query Frame = 0
Query: 1 MKLVVQNLTGSLFFVQVEDDATVCDLRTQITAHQHNLPSHRLIFIPDHNPQRLISQADDG 60
MKLV +NLTGSLF+V+V+D ATV DLRT+I++ Q +LPS RL+F+PDH+ RLIS ADDG
Sbjct: 1 MKLVAENLTGSLFYVEVDDGATVLDLRTEISS-QQSLPSDRLLFVPDHDRGRLISAADDG 60
Query: 61 ISLVDFGLRDGSHIYIFFCPLDDDDGDDIEARRFFLTSPDLLLF 105
SLVDFGLRDGS IY+FFCPLDD+ DD++AR+ F PDLLLF
Sbjct: 61 TSLVDFGLRDGSLIYVFFCPLDDEGVDDLDARQLFFNCPDLLLF 103
BLAST of PI0012754.1 vs. NCBI nr
Match:
XP_022930696.1 (uncharacterized protein LOC111437093 [Cucurbita moschata])
HSP 1 Score: 146.4 bits (368), Expect = 1.4e-31
Identity = 70/104 (67.31%), Postives = 87/104 (83.65%), Query Frame = 0
Query: 1 MKLVVQNLTGSLFFVQVEDDATVCDLRTQITAHQHNLPSHRLIFIPDHNPQRLISQADDG 60
MKLV +NLTGSLF+V+V+D ATV DLRT+I++ Q +LPS RL+F+PDH+ RLIS ADDG
Sbjct: 1 MKLVAENLTGSLFYVEVDDGATVLDLRTEISS-QQSLPSDRLLFVPDHDRGRLISAADDG 60
Query: 61 ISLVDFGLRDGSHIYIFFCPLDDDDGDDIEARRFFLTSPDLLLF 105
SLVDFGLRDGS IY+FFCPLD++ DD++AR+ F PDLLLF
Sbjct: 61 TSLVDFGLRDGSLIYVFFCPLDEEGVDDLDARQLFFNCPDLLLF 103
BLAST of PI0012754.1 vs. NCBI nr
Match:
XP_022136124.1 (uncharacterized protein LOC111007894 [Momordica charantia])
HSP 1 Score: 126.7 bits (317), Expect = 1.2e-25
Identity = 68/114 (59.65%), Postives = 81/114 (71.05%), Query Frame = 0
Query: 1 MKLVVQNLTGSLFFVQVEDDATVCDLRTQITAHQHN-LPSHRLIFIPDHNPQRLISQADD 60
MKL V+NLTGSLF +QV+DDATV DL+ +I+AH +N LPS RLIFI D NP R IS+ DD
Sbjct: 1 MKLAVENLTGSLFHIQVKDDATVSDLKAEISAHHNNDLPSDRLIFIADDNPGRPISKDDD 60
Query: 61 GISLVDFGLRDGSHIYIFFCPLD---------DDDGDDIEARRFFLTSPDLLLF 105
G SLVD G++DGSHIYIFF PLD DD D +R FF T ++LLF
Sbjct: 61 GFSLVDCGVKDGSHIYIFFHPLDHEDDRDHGGDDPDQDHHSRLFFFTCHNILLF 114
BLAST of PI0012754.1 vs. TAIR 10
Match:
AT2G32360.1 (Ubiquitin-like superfamily protein )
HSP 1 Score: 53.5 bits (127), Expect = 1.2e-07
Identity = 36/101 (35.64%), Postives = 55/101 (54.46%), Query Frame = 0
Query: 1 MKLVVQNLTGSLFFVQVEDDATVCDLRTQITAHQHNLPSHRLIF-IPDHNPQRLISQADD 60
MK+ V+ +TG+ V +DATV ++ +I A + LP RLI I D +RL+ + +D
Sbjct: 1 MKVSVEIITGTFIDTDVSEDATVKQMKEKI-AVEVKLPVTRLILVIGDEETRRLVMEDED 60
Query: 61 GISLVDFGLRDGSHIYIFFCPLD----------DDDGDDIE 91
+ L D G+ + SHIY+FF D +DD D +E
Sbjct: 61 DMMLRDLGVGEDSHIYLFFKHPDLVSKEERSKGEDDDDPME 100
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A0A0K6V6 | 4.6e-44 | 88.79 | Ubiquitin-like domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G044... | [more] |
A0A6J1JPI4 | 1.5e-34 | 72.12 | uncharacterized protein LOC111486561 OS=Cucurbita maxima OX=3661 GN=LOC111486561... | [more] |
A0A6J1ERN4 | 6.8e-32 | 67.31 | uncharacterized protein LOC111437093 OS=Cucurbita moschata OX=3662 GN=LOC1114370... | [more] |
A0A6J1C3E5 | 5.6e-26 | 59.65 | uncharacterized protein LOC111007894 OS=Momordica charantia OX=3673 GN=LOC111007... | [more] |
A0A5D3BP45 | 1.1e-24 | 79.17 | Phosphoglucan phosphatase LSF1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s... | [more] |
Match Name | E-value | Identity | Description | |
KGN43536.1 | 9.4e-44 | 88.79 | hypothetical protein Csa_020453 [Cucumis sativus] | [more] |
XP_022989504.1 | 3.0e-34 | 72.12 | uncharacterized protein LOC111486561 [Cucurbita maxima] | [more] |
KAG6589175.1 | 4.8e-32 | 68.27 | hypothetical protein SDJN03_17740, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
XP_022930696.1 | 1.4e-31 | 67.31 | uncharacterized protein LOC111437093 [Cucurbita moschata] | [more] |
XP_022136124.1 | 1.2e-25 | 59.65 | uncharacterized protein LOC111007894 [Momordica charantia] | [more] |
Match Name | E-value | Identity | Description | |
AT2G32360.1 | 1.2e-07 | 35.64 | Ubiquitin-like superfamily protein | [more] |