PI0012754 (gene) Melon (PI 482460) v1

Overview


Name	PI0012754
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Ubiquitin-like domain-containing protein
Location	chr01: 3164942 .. 3165256 (-)
RNA-Seq Expression	PI0012754
Synteny	PI0012754

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGTTGGTGGTGCAAAATTTGACTGGCTCTTTGTTCTTCGTCCAGGTTGAAGACGATGCTACTGTTTGTGATCTTAGAACTCAAATCACTGCTCACCAACACAACCTCCCTTCTCACCGTTTAATCTTCATTCCCGACCACAATCCTCAACGTCTGATCTCCCAGGCCGATGATGGAATCTCACTAGTTGATTTTGGCTTACGTGATGGGTCCCACATTTACATCTTTTTTTGTCCCCTTGATGACGATGATGGTGATGATATTGAAGCTCGCCGATTCTTCCTTACTTCTCCCGATCTTCTTCTCTTCTAA

mRNA sequence

ATGAAGTTGGTGGTGCAAAATTTGACTGGCTCTTTGTTCTTCGTCCAGGTTGAAGACGATGCTACTGTTTGTGATCTTAGAACTCAAATCACTGCTCACCAACACAACCTCCCTTCTCACCGTTTAATCTTCATTCCCGACCACAATCCTCAACGTCTGATCTCCCAGGCCGATGATGGAATCTCACTAGTTGATTTTGGCTTACGTGATGGGTCCCACATTTACATCTTTTTTTGTCCCCTTGATGACGATGATGGTGATGATATTGAAGCTCGCCGATTCTTCCTTACTTCTCCCGATCTTCTTCTCTTCTAA

Coding sequence (CDS)

ATGAAGTTGGTGGTGCAAAATTTGACTGGCTCTTTGTTCTTCGTCCAGGTTGAAGACGATGCTACTGTTTGTGATCTTAGAACTCAAATCACTGCTCACCAACACAACCTCCCTTCTCACCGTTTAATCTTCATTCCCGACCACAATCCTCAACGTCTGATCTCCCAGGCCGATGATGGAATCTCACTAGTTGATTTTGGCTTACGTGATGGGTCCCACATTTACATCTTTTTTTGTCCCCTTGATGACGATGATGGTGATGATATTGAAGCTCGCCGATTCTTCCTTACTTCTCCCGATCTTCTTCTCTTCTAA

Protein sequence

MKLVVQNLTGSLFFVQVEDDATVCDLRTQITAHQHNLPSHRLIFIPDHNPQRLISQADDGISLVDFGLRDGSHIYIFFCPLDDDDGDDIEARRFFLTSPDLLLF

Homology

[Close]

BLAST of PI0012754 vs. ExPASy TrEMBL
Match: A0A0A0K6V6 (Ubiquitin-like domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G044270 PE=4 SV=1)

HSP 1 Score: 186.8 bits (473), Expect = 4.6e-44
Identity = 95/107 (88.79%), Postives = 97/107 (90.65%), Query Frame = 0


Query: 1   MKLVVQNLTGSLFFVQVEDDATVCDLRTQITA--HQHNLPSHRLIFIPDHNPQRLISQAD 60
           MKLVVQNLTGSLFFV+VEDDATV DLRTQI A  HQHNLPSHRLIFIPDHNP+RLISQ D
Sbjct: 1   MKLVVQNLTGSLFFVEVEDDATVSDLRTQINAHPHQHNLPSHRLIFIPDHNPERLISQVD 60

Query: 61  DGISLVDFGLRDGSHIYIFFCPLDDDDGDDIEARRFFLT-SPDLLLF 105
           DGISLVDFGLRDGSHIYIFF PL DDDGDDIEARRFF T S DLLLF
Sbjct: 61  DGISLVDFGLRDGSHIYIFFSPLHDDDGDDIEARRFFFTSSSDLLLF 107

[Close]

BLAST of PI0012754 vs. ExPASy TrEMBL
Match: A0A6J1JPI4 (uncharacterized protein LOC111486561 OS=Cucurbita maxima OX=3661 GN=LOC111486561 PE=4 SV=1)

HSP 1 Score: 155.2 bits (391), Expect = 1.5e-34
Identity = 75/104 (72.12%), Postives = 89/104 (85.58%), Query Frame = 0


Query: 1   MKLVVQNLTGSLFFVQVEDDATVCDLRTQITAHQHNLPSHRLIFIPDHNPQRLISQADDG 60
           MKLV +NLTGSLF+V+V+D ATV DLRT+I++ Q +LPS RL+F+PDH+  RLIS ADDG
Sbjct: 1   MKLVAENLTGSLFYVEVDDGATVLDLRTEISS-QQSLPSDRLLFVPDHDRGRLISVADDG 60

Query: 61  ISLVDFGLRDGSHIYIFFCPLDDDDGDDIEARRFFLTSPDLLLF 105
           ISLVDFGLRDGS IYIFFCPLDDD GDD++AR+ F   PDLLLF
Sbjct: 61  ISLVDFGLRDGSLIYIFFCPLDDDGGDDVDARQLFFNCPDLLLF 103

[Close]

BLAST of PI0012754 vs. ExPASy TrEMBL
Match: A0A6J1ERN4 (uncharacterized protein LOC111437093 OS=Cucurbita moschata OX=3662 GN=LOC111437093 PE=4 SV=1)

HSP 1 Score: 146.4 bits (368), Expect = 6.8e-32
Identity = 70/104 (67.31%), Postives = 87/104 (83.65%), Query Frame = 0


Query: 1   MKLVVQNLTGSLFFVQVEDDATVCDLRTQITAHQHNLPSHRLIFIPDHNPQRLISQADDG 60
           MKLV +NLTGSLF+V+V+D ATV DLRT+I++ Q +LPS RL+F+PDH+  RLIS ADDG
Sbjct: 1   MKLVAENLTGSLFYVEVDDGATVLDLRTEISS-QQSLPSDRLLFVPDHDRGRLISAADDG 60

Query: 61  ISLVDFGLRDGSHIYIFFCPLDDDDGDDIEARRFFLTSPDLLLF 105
            SLVDFGLRDGS IY+FFCPLD++  DD++AR+ F   PDLLLF
Sbjct: 61  TSLVDFGLRDGSLIYVFFCPLDEEGVDDLDARQLFFNCPDLLLF 103

[Close]

BLAST of PI0012754 vs. ExPASy TrEMBL
Match: A0A6J1C3E5 (uncharacterized protein LOC111007894 OS=Momordica charantia OX=3673 GN=LOC111007894 PE=4 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 5.6e-26
Identity = 68/114 (59.65%), Postives = 81/114 (71.05%), Query Frame = 0


Query: 1   MKLVVQNLTGSLFFVQVEDDATVCDLRTQITAHQHN-LPSHRLIFIPDHNPQRLISQADD 60
           MKL V+NLTGSLF +QV+DDATV DL+ +I+AH +N LPS RLIFI D NP R IS+ DD
Sbjct: 1   MKLAVENLTGSLFHIQVKDDATVSDLKAEISAHHNNDLPSDRLIFIADDNPGRPISKDDD 60

Query: 61  GISLVDFGLRDGSHIYIFFCPLD---------DDDGDDIEARRFFLTSPDLLLF 105
           G SLVD G++DGSHIYIFF PLD         DD   D  +R FF T  ++LLF
Sbjct: 61  GFSLVDCGVKDGSHIYIFFHPLDHEDDRDHGGDDPDQDHHSRLFFFTCHNILLF 114

[Close]

BLAST of PI0012754 vs. ExPASy TrEMBL
Match: A0A5D3BP45 (Phosphoglucan phosphatase LSF1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1545G00410 PE=4 SV=1)

HSP 1 Score: 122.5 bits (306), Expect = 1.1e-24
Identity = 57/72 (79.17%), Postives = 63/72 (87.50%), Query Frame = 0


Query: 27  RTQITAHQHNLPSHRLIFIPDHNPQRLISQADDGISLVDFGLRDGSHIYIFFCPLDDDDG 86
           RTQI AHQ NLPSH LIFI DH+P+RLIS+ DD ISLVDFGL DGS+IYIFFCPLD+D G
Sbjct: 575 RTQIIAHQRNLPSHCLIFILDHDPERLISEVDDKISLVDFGLHDGSNIYIFFCPLDNDGG 634

Query: 87  DDIEARRFFLTS 99
           DDIEARRFF T+
Sbjct: 635 DDIEARRFFFTT 646

[Close]

BLAST of PI0012754 vs. NCBI nr
Match: KGN43536.1 (hypothetical protein Csa_020453 [Cucumis sativus])

HSP 1 Score: 186.8 bits (473), Expect = 9.4e-44
Identity = 95/107 (88.79%), Postives = 97/107 (90.65%), Query Frame = 0


Query: 1   MKLVVQNLTGSLFFVQVEDDATVCDLRTQITA--HQHNLPSHRLIFIPDHNPQRLISQAD 60
           MKLVVQNLTGSLFFV+VEDDATV DLRTQI A  HQHNLPSHRLIFIPDHNP+RLISQ D
Sbjct: 1   MKLVVQNLTGSLFFVEVEDDATVSDLRTQINAHPHQHNLPSHRLIFIPDHNPERLISQVD 60

Query: 61  DGISLVDFGLRDGSHIYIFFCPLDDDDGDDIEARRFFLT-SPDLLLF 105
           DGISLVDFGLRDGSHIYIFF PL DDDGDDIEARRFF T S DLLLF
Sbjct: 61  DGISLVDFGLRDGSHIYIFFSPLHDDDGDDIEARRFFFTSSSDLLLF 107

[Close]

BLAST of PI0012754 vs. NCBI nr
Match: XP_022989504.1 (uncharacterized protein LOC111486561 [Cucurbita maxima])

HSP 1 Score: 155.2 bits (391), Expect = 3.0e-34
Identity = 75/104 (72.12%), Postives = 89/104 (85.58%), Query Frame = 0


Query: 1   MKLVVQNLTGSLFFVQVEDDATVCDLRTQITAHQHNLPSHRLIFIPDHNPQRLISQADDG 60
           MKLV +NLTGSLF+V+V+D ATV DLRT+I++ Q +LPS RL+F+PDH+  RLIS ADDG
Sbjct: 1   MKLVAENLTGSLFYVEVDDGATVLDLRTEISS-QQSLPSDRLLFVPDHDRGRLISVADDG 60

Query: 61  ISLVDFGLRDGSHIYIFFCPLDDDDGDDIEARRFFLTSPDLLLF 105
           ISLVDFGLRDGS IYIFFCPLDDD GDD++AR+ F   PDLLLF
Sbjct: 61  ISLVDFGLRDGSLIYIFFCPLDDDGGDDVDARQLFFNCPDLLLF 103

[Close]

BLAST of PI0012754 vs. NCBI nr
Match: KAG6589175.1 (hypothetical protein SDJN03_17740, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 147.9 bits (372), Expect = 4.8e-32
Identity = 71/104 (68.27%), Postives = 87/104 (83.65%), Query Frame = 0


Query: 1   MKLVVQNLTGSLFFVQVEDDATVCDLRTQITAHQHNLPSHRLIFIPDHNPQRLISQADDG 60
           MKLV +NLTGSLF+V+V+D ATV DLRT+I++ Q +LPS RL+F+PDH+  RLIS ADDG
Sbjct: 1   MKLVAENLTGSLFYVEVDDGATVLDLRTEISS-QQSLPSDRLLFVPDHDRGRLISAADDG 60

Query: 61  ISLVDFGLRDGSHIYIFFCPLDDDDGDDIEARRFFLTSPDLLLF 105
            SLVDFGLRDGS IY+FFCPLDD+  DD++AR+ F   PDLLLF
Sbjct: 61  TSLVDFGLRDGSLIYVFFCPLDDEGVDDLDARQLFFNCPDLLLF 103

[Close]

BLAST of PI0012754 vs. NCBI nr
Match: XP_022930696.1 (uncharacterized protein LOC111437093 [Cucurbita moschata])

HSP 1 Score: 146.4 bits (368), Expect = 1.4e-31
Identity = 70/104 (67.31%), Postives = 87/104 (83.65%), Query Frame = 0


Query: 1   MKLVVQNLTGSLFFVQVEDDATVCDLRTQITAHQHNLPSHRLIFIPDHNPQRLISQADDG 60
           MKLV +NLTGSLF+V+V+D ATV DLRT+I++ Q +LPS RL+F+PDH+  RLIS ADDG
Sbjct: 1   MKLVAENLTGSLFYVEVDDGATVLDLRTEISS-QQSLPSDRLLFVPDHDRGRLISAADDG 60

Query: 61  ISLVDFGLRDGSHIYIFFCPLDDDDGDDIEARRFFLTSPDLLLF 105
            SLVDFGLRDGS IY+FFCPLD++  DD++AR+ F   PDLLLF
Sbjct: 61  TSLVDFGLRDGSLIYVFFCPLDEEGVDDLDARQLFFNCPDLLLF 103

[Close]

BLAST of PI0012754 vs. NCBI nr
Match: XP_022136124.1 (uncharacterized protein LOC111007894 [Momordica charantia])

HSP 1 Score: 126.7 bits (317), Expect = 1.2e-25
Identity = 68/114 (59.65%), Postives = 81/114 (71.05%), Query Frame = 0


Query: 1   MKLVVQNLTGSLFFVQVEDDATVCDLRTQITAHQHN-LPSHRLIFIPDHNPQRLISQADD 60
           MKL V+NLTGSLF +QV+DDATV DL+ +I+AH +N LPS RLIFI D NP R IS+ DD
Sbjct: 1   MKLAVENLTGSLFHIQVKDDATVSDLKAEISAHHNNDLPSDRLIFIADDNPGRPISKDDD 60

Query: 61  GISLVDFGLRDGSHIYIFFCPLD---------DDDGDDIEARRFFLTSPDLLLF 105
           G SLVD G++DGSHIYIFF PLD         DD   D  +R FF T  ++LLF
Sbjct: 61  GFSLVDCGVKDGSHIYIFFHPLDHEDDRDHGGDDPDQDHHSRLFFFTCHNILLF 114

[Close]

BLAST of PI0012754 vs. TAIR 10
Match: AT2G32360.1 (Ubiquitin-like superfamily protein )

HSP 1 Score: 53.5 bits (127), Expect = 1.2e-07
Identity = 36/101 (35.64%), Postives = 55/101 (54.46%), Query Frame = 0


Query: 1   MKLVVQNLTGSLFFVQVEDDATVCDLRTQITAHQHNLPSHRLIF-IPDHNPQRLISQADD 60
           MK+ V+ +TG+     V +DATV  ++ +I A +  LP  RLI  I D   +RL+ + +D
Sbjct: 1   MKVSVEIITGTFIDTDVSEDATVKQMKEKI-AVEVKLPVTRLILVIGDEETRRLVMEDED 60

Query: 61  GISLVDFGLRDGSHIYIFFCPLD----------DDDGDDIE 91
            + L D G+ + SHIY+FF   D          +DD D +E
Sbjct: 61  DMMLRDLGVGEDSHIYLFFKHPDLVSKEERSKGEDDDDPME 100

The following BLAST results are available for this feature:

BLAST of PI0012754 vs.


Match Name	E-value	Identity	Description

BLAST of PI0012754 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K6V6	4.6e-44	88.79	Ubiquitin-like domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G044...	[more]
A0A6J1JPI4	1.5e-34	72.12	uncharacterized protein LOC111486561 OS=Cucurbita maxima OX=3661 GN=LOC111486561...	[more]
A0A6J1ERN4	6.8e-32	67.31	uncharacterized protein LOC111437093 OS=Cucurbita moschata OX=3662 GN=LOC1114370...	[more]
A0A6J1C3E5	5.6e-26	59.65	uncharacterized protein LOC111007894 OS=Momordica charantia OX=3673 GN=LOC111007...	[more]
A0A5D3BP45	1.1e-24	79.17	Phosphoglucan phosphatase LSF1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]

BLAST of PI0012754 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN43536.1	9.4e-44	88.79	hypothetical protein Csa_020453 [Cucumis sativus]	[more]
XP_022989504.1	3.0e-34	72.12	uncharacterized protein LOC111486561 [Cucurbita maxima]	[more]
KAG6589175.1	4.8e-32	68.27	hypothetical protein SDJN03_17740, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022930696.1	1.4e-31	67.31	uncharacterized protein LOC111437093 [Cucurbita moschata]	[more]
XP_022136124.1	1.2e-25	59.65	uncharacterized protein LOC111007894 [Momordica charantia]	[more]

BLAST of PI0012754 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G32360.1	1.2e-07	35.64	Ubiquitin-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.10.20.90		coord: 1..78 e-value: 2.5E-7 score: 32.4
None	No IPR available	CDD	cd17039	Ubl_ubiquitin_like	coord: 3..77 e-value: 1.10399E-6 score: 40.6574
IPR029071	Ubiquitin-like domain superfamily	SUPERFAMILY	54236	Ubiquitin-like	coord: 1..79

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0012754.1	PI0012754.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006470	protein dephosphorylation
biological_process	GO:0005983	starch catabolic process
molecular_function	GO:0008138	protein tyrosine/serine/threonine phosphatase activity