Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATCTCAGATGCCCAAGGTGTTGTTATATATGGTAGACAGATCTTGGACCAAACCCTCGTAGCTAATGAGATCATTGAGGATTATAAAAGTCATAAGTGGGAGAATGTTATCTTTAACATTGATTTTGAGAAGCCTCAGGGACACCCCAATTGGCAAGGGCTTGGGTCTCTTGGTCATACCGACTTAGAGGTCTCAAGTTCAAACCTTCTGTTGAGCTTAATACCAAAAATCCATGTCTTTTAGGTCCGAACCTTGGAGCAAGCGTGGGTGCCCCTAGGTATAGGGGAAAAAGCTCCGACCCCAATTATCAAACAAAACAAAAAAATAAAACATTTATTTTGAGAAGGCTTATGGTCATGTGGATTGAGATTTCCCGGACATAGTCCTCCAAAAGAAGGGGGTTGAGTATAAATGGAGATCGTGGATTTGGAGTGGCATTATGACAGTTAGTATTCTATCTTGGTTGATGGAAAGCTGAGAGGCAGTATCCTTGCTTCGAGAGGTTTGACATGACCCCTCTGCCCTTTCCTTTTCCTGCTGGTAGTAGACGACATATGTAGAGTGGTCTCAAGAGGAGTGGAGGGCAACGTTCTAGAAGGTTTTCTGATGGTGAAGGATAGGTTAGTTCTTCTCTGCCTCCAATTCGTTGATGACATGATTTTCTTCTGTTGTAGGAATGAGTCTTTTGTTAATCTCAACCGAATTCTGGCCTTTTTAGTTGACTTCCAGTCTGAAGATTAACAGGAGTGTTCCCCCCTAGGTATCAATTGTGACCGGTCCAAGGTGGGCACCTGGGCTTCTTTGGTTGGGTGCGAGGTAGGTTAGTTTCTCTCTTCTTACTTAGGCCTACCTCTCGGTCACAATCACATAAGCTCATCATTTTGGGACCTTGCGGTCGAACAAGTGCAAAAACATCTTTTCTCATTGAAAAGAGTTTTTCTCCGAGGGGGTAGACTTACCAGTCTGTGATGCAATTCCACTTTATTGGGATTCTTTATTCTTCTTCTTCTTCTTCTCTTTCTGCAATTAGTTCTTCTCTGCAACTGCAACTATTTGTTTCCTGAGGTGGTTCCCTCTTCCTCTTTTCACCATTCTTCTCATATATAGGCCAAAAAGTAGTCCCCAATTCGGATTTCGAGTTGGACAAAAACCAAAAATAAAAATAAAAGAAAACAAGATTTCCCTCAATCTGTATCTCATAAAAGAACTGCACAAAAATCTGATTCCACCCCTGTAAAATCTGGGTGTCCTGCAAAACTTGAGTCTAGCCTCAAATGAAGATACAAATCATGTTAATTTGATTAGTTTTTCTTTTTCCCTTCTTGATTCTTTCTTTTACGTTCTTCTCAACCAGTTTCCTCTTTCAAATTGGGAAAGATAGTTTGTACTTTGTTGACATCTTTGTGTTATGTTTTTCAGGTTGGGGCCAAGACTCGTATATGGTAGTTGA
mRNA sequence
ATGATCTCAGATGCCCAAGGTGTTGTTATATATGGTAGACAGATCTTGGACCAAACCCTCGTAGCTAATGAGATCATTGAGGATTATAAAAGTCATAAGTGGGAGAATGTTATCTTTAACATTGATTTTGAGAAGCCTCAGGGACACCCCAATTGGCAAGGGCTTGGGTCTCTTGGTCATACCGACTTAGAGGTCCGAACCTTGGAGCAAGCGTGGGTGCCCCTAGTAGACGACATATGTAGAGTGGTCTCAAGAGGAGTGGAGGGCAACGTTCTAGAAGGTTTTCTGATGGTGAAGGATAGGTTGGGGCCAAGACTCGTATATGGTAGTTGA
Coding sequence (CDS)
ATGATCTCAGATGCCCAAGGTGTTGTTATATATGGTAGACAGATCTTGGACCAAACCCTCGTAGCTAATGAGATCATTGAGGATTATAAAAGTCATAAGTGGGAGAATGTTATCTTTAACATTGATTTTGAGAAGCCTCAGGGACACCCCAATTGGCAAGGGCTTGGGTCTCTTGGTCATACCGACTTAGAGGTCCGAACCTTGGAGCAAGCGTGGGTGCCCCTAGTAGACGACATATGTAGAGTGGTCTCAAGAGGAGTGGAGGGCAACGTTCTAGAAGGTTTTCTGATGGTGAAGGATAGGTTGGGGCCAAGACTCGTATATGGTAGTTGA
Protein sequence
MISDAQGVVIYGRQILDQTLVANEIIEDYKSHKWENVIFNIDFEKPQGHPNWQGLGSLGHTDLEVRTLEQAWVPLVDDICRVVSRGVEGNVLEGFLMVKDRLGPRLVYGS
Homology
BLAST of Moc09g00750.1 vs. NCBI nr
Match:
RVW14784.1 (hypothetical protein CK203_091029 [Vitis vinifera])
HSP 1 Score: 70.5 bits (171), Expect = 1.0e-08
Identity = 40/116 (34.48%), Postives = 59/116 (50.86%), Query Frame = 0
Query: 2 ISDAQGVVIYGRQILDQTLVANEIIEDYKSHKWENVIFNIDFEKPQGHPNWQGLGSLGHT 61
I QG + GRQILD L+ANEI+++ + + E V+F IDFEK H +W L +
Sbjct: 564 IHSTQGAFVQGRQILDAVLIANEIVDEKRRSREEGVVFKIDFEKAYDHVSWDFLDHV--- 623
Query: 62 DLEVRTLEQAW----------------VPLVDDICRVVSRGVEGNVLEGFLMVKDR 102
LE++ W V + D + R++ R E NVLEGF + ++R
Sbjct: 624 -LEMKGFSPRWRKWMRGCLSSVSFAVLVKVADVLSRMLLRAEERNVLEGFRVGRNR 675
BLAST of Moc09g00750.1 vs. NCBI nr
Match:
RVW32868.1 (DExH-box ATP-dependent RNA helicase DExH14 [Vitis vinifera])
HSP 1 Score: 67.8 bits (164), Expect = 6.7e-08
Identity = 43/114 (37.72%), Postives = 59/114 (51.75%), Query Frame = 0
Query: 2 ISDAQGVVIYGRQILDQTLVANEIIEDYKSHKWENVIFNIDFEKPQGHPNWQGLGSLGHT 61
I QG + GRQILD L+ANEI+++ + E V+F IDFE H +W G L H
Sbjct: 915 IHSTQGAFVQGRQILDVVLIANEIVDEKRRSGEEGVVFKIDFENAYDHVSW---GFLDHV 974
Query: 62 DLEVRTLEQAW-------------VPLVDDI-CRVVSRGVEGNVLEGFLMVKDR 102
LE++ W LV+DI R++ R E NVLEGF + ++R
Sbjct: 975 -LEMKGFSPRWRQWMRGCLSSVSFAVLVNDILSRMLLRAEERNVLEGFRVGRNR 1024
BLAST of Moc09g00750.1 vs. NCBI nr
Match:
RVW90164.1 (putative mitochondrial protein [Vitis vinifera])
HSP 1 Score: 67.4 bits (163), Expect = 8.8e-08
Identity = 38/107 (35.51%), Postives = 57/107 (53.27%), Query Frame = 0
Query: 2 ISDAQGVVIYGRQILDQTLVANEIIEDYKSHKWENVIFNIDFEKPQGHPNWQGLGSLGHT 61
I QG + GRQILD L+ANEI+++ K E V+F IDFEK H W L +
Sbjct: 532 IHSTQGAFVQGRQILDAVLIANEIVDEKKRSGEEGVVFKIDFEKAYNHVKWDFLDHV--L 591
Query: 62 DLEVRTLEQA-------WVPLVDDICRVVSRGVEGNVLEGFLMVKDR 102
+ + R L Q + + D + R++ + E N+LEGF + ++R
Sbjct: 592 EKKARGLRQGDPLSPFLFTIVADVLSRMLLKAEERNLLEGFRVGRNR 636
BLAST of Moc09g00750.1 vs. NCBI nr
Match:
RVW46826.1 (Transposon TX1 uncharacterized 149 kDa protein [Vitis vinifera])
HSP 1 Score: 67.4 bits (163), Expect = 8.8e-08
Identity = 39/116 (33.62%), Postives = 58/116 (50.00%), Query Frame = 0
Query: 2 ISDAQGVVIYGRQILDQTLVANEIIEDYKSHKWENVIFNIDFEKPQGHPNWQGLGSLGHT 61
I QG + GRQILD L+ANEI+++ + E V+F IDFEK H +W L +
Sbjct: 133 IHSTQGAFVQGRQILDAVLIANEIVDEKRRSGEEGVVFKIDFEKAYDHMSWDFLDHV--- 192
Query: 62 DLEVRTLEQAW----------------VPLVDDICRVVSRGVEGNVLEGFLMVKDR 102
LE++ W V + D + R++ + E NVLEGF + ++R
Sbjct: 193 -LEMKGFSPRWRKWMRGCLSSVSFPVLVNVADVLSRMLLKAEEKNVLEGFRVGRNR 244
BLAST of Moc09g00750.1 vs. NCBI nr
Match:
RVW91397.1 (putative ribonuclease H protein [Vitis vinifera])
HSP 1 Score: 67.0 bits (162), Expect = 1.2e-07
Identity = 39/120 (32.50%), Postives = 58/120 (48.33%), Query Frame = 0
Query: 2 ISDAQGVVIYGRQILDQTLVANEIIEDYKSHKWENVIFNIDFEKPQGHPNWQGLGSLGHT 61
I QG + GRQILD L+ANEI+++ + E V+F IDFEK H +W L +
Sbjct: 37 IHSTQGAFVQGRQILDSVLIANEIVDEKRGSGEEGVVFKIDFEKAYDHVSWDFLDHV--- 96
Query: 62 DLEVRTLEQAW--------------------VPLVDDICRVVSRGVEGNVLEGFLMVKDR 102
LE++ W V + D + +++ R E NVLEGF + ++R
Sbjct: 97 -LEMKGFSPRWRKWMRGCLSSVSFAVLVNGNVKVADVLSKMLLRAEERNVLEGFKVGRNR 152
BLAST of Moc09g00750.1 vs. ExPASy TrEMBL
Match:
A0A438BUX9 (Reverse transcriptase domain-containing protein OS=Vitis vinifera OX=29760 GN=CK203_091029 PE=4 SV=1)
HSP 1 Score: 70.5 bits (171), Expect = 5.0e-09
Identity = 40/116 (34.48%), Postives = 59/116 (50.86%), Query Frame = 0
Query: 2 ISDAQGVVIYGRQILDQTLVANEIIEDYKSHKWENVIFNIDFEKPQGHPNWQGLGSLGHT 61
I QG + GRQILD L+ANEI+++ + + E V+F IDFEK H +W L +
Sbjct: 564 IHSTQGAFVQGRQILDAVLIANEIVDEKRRSREEGVVFKIDFEKAYDHVSWDFLDHV--- 623
Query: 62 DLEVRTLEQAW----------------VPLVDDICRVVSRGVEGNVLEGFLMVKDR 102
LE++ W V + D + R++ R E NVLEGF + ++R
Sbjct: 624 -LEMKGFSPRWRKWMRGCLSSVSFAVLVKVADVLSRMLLRAEERNVLEGFRVGRNR 675
BLAST of Moc09g00750.1 vs. ExPASy TrEMBL
Match:
A0A438DBQ9 (DExH-box ATP-dependent RNA helicase DExH14 OS=Vitis vinifera OX=29760 GN=BRR2C_5 PE=4 SV=1)
HSP 1 Score: 67.8 bits (164), Expect = 3.3e-08
Identity = 43/114 (37.72%), Postives = 59/114 (51.75%), Query Frame = 0
Query: 2 ISDAQGVVIYGRQILDQTLVANEIIEDYKSHKWENVIFNIDFEKPQGHPNWQGLGSLGHT 61
I QG + GRQILD L+ANEI+++ + E V+F IDFE H +W G L H
Sbjct: 915 IHSTQGAFVQGRQILDVVLIANEIVDEKRRSGEEGVVFKIDFENAYDHVSW---GFLDHV 974
Query: 62 DLEVRTLEQAW-------------VPLVDDI-CRVVSRGVEGNVLEGFLMVKDR 102
LE++ W LV+DI R++ R E NVLEGF + ++R
Sbjct: 975 -LEMKGFSPRWRQWMRGCLSSVSFAVLVNDILSRMLLRAEERNVLEGFRVGRNR 1024
BLAST of Moc09g00750.1 vs. ExPASy TrEMBL
Match:
A0A803QGT5 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)
HSP 1 Score: 67.8 bits (164), Expect = 3.3e-08
Identity = 42/109 (38.53%), Postives = 54/109 (49.54%), Query Frame = 0
Query: 2 ISDAQGVVIYGRQILDQTLVANEIIEDYKSHKWENVIFNIDFEKPQGHPNWQGLG----- 61
ISD Q + GRQILD L+ANE +EDY+S ++F IDFEK W L
Sbjct: 967 ISDIQSAFVEGRQILDSVLIANETVEDYRSRGKSGMVFKIDFEKAYDRVEWDFLDLTKRK 1026
Query: 62 --SLGHTDLEVRTLEQAWVPLVDDIC-RVVSRGVEGNVLEGFLMVKDRL 103
S+ T E R LV DI R+V + V L GF + KD++
Sbjct: 1027 IQSISRT--ETRRSSPFLFTLVADILGRMVDKAVNSGSLSGFSVGKDKI 1073
BLAST of Moc09g00750.1 vs. ExPASy TrEMBL
Match:
A0A438I0B4 (Putative mitochondrial protein OS=Vitis vinifera OX=29760 GN=AtMg01250_100 PE=4 SV=1)
HSP 1 Score: 67.4 bits (163), Expect = 4.3e-08
Identity = 38/107 (35.51%), Postives = 57/107 (53.27%), Query Frame = 0
Query: 2 ISDAQGVVIYGRQILDQTLVANEIIEDYKSHKWENVIFNIDFEKPQGHPNWQGLGSLGHT 61
I QG + GRQILD L+ANEI+++ K E V+F IDFEK H W L +
Sbjct: 532 IHSTQGAFVQGRQILDAVLIANEIVDEKKRSGEEGVVFKIDFEKAYNHVKWDFLDHV--L 591
Query: 62 DLEVRTLEQA-------WVPLVDDICRVVSRGVEGNVLEGFLMVKDR 102
+ + R L Q + + D + R++ + E N+LEGF + ++R
Sbjct: 592 EKKARGLRQGDPLSPFLFTIVADVLSRMLLKAEERNLLEGFRVGRNR 636
BLAST of Moc09g00750.1 vs. ExPASy TrEMBL
Match:
A0A438EGI5 (Transposon TX1 uncharacterized 149 kDa protein OS=Vitis vinifera OX=29760 GN=YTX2_197 PE=4 SV=1)
HSP 1 Score: 67.4 bits (163), Expect = 4.3e-08
Identity = 39/116 (33.62%), Postives = 58/116 (50.00%), Query Frame = 0
Query: 2 ISDAQGVVIYGRQILDQTLVANEIIEDYKSHKWENVIFNIDFEKPQGHPNWQGLGSLGHT 61
I QG + GRQILD L+ANEI+++ + E V+F IDFEK H +W L +
Sbjct: 133 IHSTQGAFVQGRQILDAVLIANEIVDEKRRSGEEGVVFKIDFEKAYDHMSWDFLDHV--- 192
Query: 62 DLEVRTLEQAW----------------VPLVDDICRVVSRGVEGNVLEGFLMVKDR 102
LE++ W V + D + R++ + E NVLEGF + ++R
Sbjct: 193 -LEMKGFSPRWRKWMRGCLSSVSFPVLVNVADVLSRMLLKAEEKNVLEGFRVGRNR 244
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| RVW14784.1 | 1.0e-08 | 34.48 | hypothetical protein CK203_091029 [Vitis vinifera] | [more] |
| RVW32868.1 | 6.7e-08 | 37.72 | DExH-box ATP-dependent RNA helicase DExH14 [Vitis vinifera] | [more] |
| RVW90164.1 | 8.8e-08 | 35.51 | putative mitochondrial protein [Vitis vinifera] | [more] |
| RVW46826.1 | 8.8e-08 | 33.62 | Transposon TX1 uncharacterized 149 kDa protein [Vitis vinifera] | [more] |
| RVW91397.1 | 1.2e-07 | 32.50 | putative ribonuclease H protein [Vitis vinifera] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A438BUX9 | 5.0e-09 | 34.48 | Reverse transcriptase domain-containing protein OS=Vitis vinifera OX=29760 GN=CK... | [more] |
| A0A438DBQ9 | 3.3e-08 | 37.72 | DExH-box ATP-dependent RNA helicase DExH14 OS=Vitis vinifera OX=29760 GN=BRR2C_5... | [more] |
| A0A803QGT5 | 3.3e-08 | 38.53 | Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1 | [more] |
| A0A438I0B4 | 4.3e-08 | 35.51 | Putative mitochondrial protein OS=Vitis vinifera OX=29760 GN=AtMg01250_100 PE=4 ... | [more] |
| A0A438EGI5 | 4.3e-08 | 33.62 | Transposon TX1 uncharacterized 149 kDa protein OS=Vitis vinifera OX=29760 GN=YTX... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
