MS022233.1 (mRNA) Bitter gourd (TR) v1

Overview


Name	MS022233.1
Type	mRNA
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Zinc finger family protein
Location	scaffold47: 1888886 .. 1889845 (+)
Sequence length	960
RNA-Seq Expression	MS022233.1
Synteny	MS022233.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAATGCTGCAGATATTCACTCCGCCGCCATTGCCAGTAGCACTACTTCACTCGACCTCGCTTTTCCGTTTCAACTACGAATGGCGGAACTCACTTCCGTGTTTCCTTCTTCTCCTTCGACTTTCGACACCATCACGGCCTCCAAGCGCCGCCATAATCCGCGGAAGAAGCGGTCCGGAATCGACAACGGCGGAGTTACCGGCAGCGGCGTTTCGAAGCCTAAGTATAGCAAGAAGCCGCCCGATCCTCGGTCGCCGAAGATCACTCCTCCCTGCACCGAATGCGGAAAGAAGTTTTGGTCGGATAAAGCGCTTTTCGGACACATGAGGTGCCATCCGGAACGTCAATGGCGGGGTATTAATCCGCCGATTAATTTCGTCCGTCGCCCGATTTCGGTTTCTCCTCGTCGTAGCCCTACCGCCGGTTTGGAAGCTGCAATCACCGAAGAGGAACAGGACATCGCCGATTGCTTGATAATGCTGGCCAATAGCCCTAATATTGCGATCGATAAAATCCCCGAATTAGACGGCGTTGGTACGACATGTCGTTTCGAATGCTCGAGTTGCAAGAAAGTGTTCGGGTCGCACCAGGCGCTTGGGGGGCACAGGGCAAGCCACAAGAACGTGAAAGGTTGTTTCGCCATCGCAAGGGGCGATGAAGAAACAGAGGAACATCAGTTTCAGAGCGCTGCTCTGTATGGCCATGAGAGGAATTCCAATCTGGAGGATAGAATGTCGATGTTTTTTGGGATAGGGCACAAGTGCAGTATATGTATGAGGGTTTTTGCCAGTGGTCAAGCTCTTGGTGGGCACAAGAGGTGCCATTGGGAGAGAGTGGAGGAGAATACAGCAACAGAGGGTTGTGCTAATTTGGACTTGAATTTGCCTCCTGCCCCTGTTGAAGATGACTCCTCTTCTTCCTATTCTTCAGGCCTCACTCTGGATCTCAGGTTGGGCCTT

mRNA sequence

ATGAATGCTGCAGATATTCACTCCGCCGCCATTGCCAGTAGCACTACTTCACTCGACCTCGCTTTTCCGTTTCAACTACGAATGGCGGAACTCACTTCCGTGTTTCCTTCTTCTCCTTCGACTTTCGACACCATCACGGCCTCCAAGCGCCGCCATAATCCGCGGAAGAAGCGGTCCGGAATCGACAACGGCGGAGTTACCGGCAGCGGCGTTTCGAAGCCTAAGTATAGCAAGAAGCCGCCCGATCCTCGGTCGCCGAAGATCACTCCTCCCTGCACCGAATGCGGAAAGAAGTTTTGGTCGGATAAAGCGCTTTTCGGACACATGAGGTGCCATCCGGAACGTCAATGGCGGGGTATTAATCCGCCGATTAATTTCGTCCGTCGCCCGATTTCGGTTTCTCCTCGTCGTAGCCCTACCGCCGGTTTGGAAGCTGCAATCACCGAAGAGGAACAGGACATCGCCGATTGCTTGATAATGCTGGCCAATAGCCCTAATATTGCGATCGATAAAATCCCCGAATTAGACGGCGTTGGTACGACATGTCGTTTCGAATGCTCGAGTTGCAAGAAAGTGTTCGGGTCGCACCAGGCGCTTGGGGGGCACAGGGCAAGCCACAAGAACGTGAAAGGTTGTTTCGCCATCGCAAGGGGCGATGAAGAAACAGAGGAACATCAGTTTCAGAGCGCTGCTCTGTATGGCCATGAGAGGAATTCCAATCTGGAGGATAGAATGTCGATGTTTTTTGGGATAGGGCACAAGTGCAGTATATGTATGAGGGTTTTTGCCAGTGGTCAAGCTCTTGGTGGGCACAAGAGGTGCCATTGGGAGAGAGTGGAGGAGAATACAGCAACAGAGGGTTGTGCTAATTTGGACTTGAATTTGCCTCCTGCCCCTGTTGAAGATGACTCCTCTTCTTCCTATTCTTCAGGCCTCACTCTGGATCTCAGGTTGGGCCTT

Coding sequence (CDS)

ATGAATGCTGCAGATATTCACTCCGCCGCCATTGCCAGTAGCACTACTTCACTCGACCTCGCTTTTCCGTTTCAACTACGAATGGCGGAACTCACTTCCGTGTTTCCTTCTTCTCCTTCGACTTTCGACACCATCACGGCCTCCAAGCGCCGCCATAATCCGCGGAAGAAGCGGTCCGGAATCGACAACGGCGGAGTTACCGGCAGCGGCGTTTCGAAGCCTAAGTATAGCAAGAAGCCGCCCGATCCTCGGTCGCCGAAGATCACTCCTCCCTGCACCGAATGCGGAAAGAAGTTTTGGTCGGATAAAGCGCTTTTCGGACACATGAGGTGCCATCCGGAACGTCAATGGCGGGGTATTAATCCGCCGATTAATTTCGTCCGTCGCCCGATTTCGGTTTCTCCTCGTCGTAGCCCTACCGCCGGTTTGGAAGCTGCAATCACCGAAGAGGAACAGGACATCGCCGATTGCTTGATAATGCTGGCCAATAGCCCTAATATTGCGATCGATAAAATCCCCGAATTAGACGGCGTTGGTACGACATGTCGTTTCGAATGCTCGAGTTGCAAGAAAGTGTTCGGGTCGCACCAGGCGCTTGGGGGGCACAGGGCAAGCCACAAGAACGTGAAAGGTTGTTTCGCCATCGCAAGGGGCGATGAAGAAACAGAGGAACATCAGTTTCAGAGCGCTGCTCTGTATGGCCATGAGAGGAATTCCAATCTGGAGGATAGAATGTCGATGTTTTTTGGGATAGGGCACAAGTGCAGTATATGTATGAGGGTTTTTGCCAGTGGTCAAGCTCTTGGTGGGCACAAGAGGTGCCATTGGGAGAGAGTGGAGGAGAATACAGCAACAGAGGGTTGTGCTAATTTGGACTTGAATTTGCCTCCTGCCCCTGTTGAAGATGACTCCTCTTCTTCCTATTCTTCAGGCCTCACTCTGGATCTCAGGTTGGGCCTT

Protein sequence

MNAADIHSAAIASSTTSLDLAFPFQLRMAELTSVFPSSPSTFDTITASKRRHNPRKKRSGIDNGGVTGSGVSKPKYSKKPPDPRSPKITPPCTECGKKFWSDKALFGHMRCHPERQWRGINPPINFVRRPISVSPRRSPTAGLEAAITEEEQDIADCLIMLANSPNIAIDKIPELDGVGTTCRFECSSCKKVFGSHQALGGHRASHKNVKGCFAIARGDEETEEHQFQSAALYGHERNSNLEDRMSMFFGIGHKCSICMRVFASGQALGGHKRCHWERVEENTATEGCANLDLNLPPAPVEDDSSSSYSSGLTLDLRLGL

Homology

[Close]

BLAST of MS022233.1 vs. NCBI nr
Match: KAG6572169.1 (Zinc finger protein ZAT3, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 375.2 bits (962), Expect = 5.7e-100
Identity = 211/322 (65.53%), Postives = 244/322 (75.78%), Query Frame = 0


Query: 4   ADIHSAAIASSTTS-LDLAFPFQLRMAELTSVFPSSPSTFDTITASKRRHNPRKKRSGID 63
           +DI+S AI+SS++S LDLA PFQL + E         STFD    SKRRHNPRKKRS  +
Sbjct: 3   SDINSLAISSSSSSALDLAIPFQLGIVE---------STFD----SKRRHNPRKKRSRTE 62

Query: 64  NGGVTGSGVSKPKYSKKPPDPRSPKITPPCTECGKKFWSDKALFGHMRCHPERQWRGINP 123
           N      G SK KY KK PDP +PKITPPC+ECG++FWSDKALFGHMRCHPERQWRGINP
Sbjct: 63  NASTAAVG-SKAKYRKK-PDPTAPKITPPCSECGRRFWSDKALFGHMRCHPERQWRGINP 122

Query: 124 PINFVRRPISVSPRRSPTAGL-EAAITEEEQDIADCLIMLANSPNIAIDKIPELDGVGTT 183
           P++F RR +SVSP R P A L E+A TEEEQD+A+CL++LA+ P+ AI ++ +       
Sbjct: 123 PVSF-RRSVSVSPFR-PRADLEESAFTEEEQDVANCLLVLADCPS-AIARVSDF------ 182

Query: 184 CRFECSSCKKVFGSHQALGGHRASHKNVKGCFAIARGDEETEEHQFQSAALYGHERNSNL 243
            RFEC+SCKKVFGSHQALGGHRASHKNV+GC A+A+ DEE E          GH+ + NL
Sbjct: 183 -RFECASCKKVFGSHQALGGHRASHKNVRGCSAMAKSDEEIEHDALFGHC--GHDLSINL 242

Query: 244 EDRMSMFFG--IGHKCSICMRVFASGQALGGHKRCHWERVEENTAT-EGCANLDLNLPPA 303
           ED+MSM  G   GHKCS+CMRVFASGQALGGH RCHWERVEEN AT EG  NLDLN+ PA
Sbjct: 243 EDKMSMILGTAAGHKCSVCMRVFASGQALGGHMRCHWERVEENAATEEGFLNLDLNM-PA 296

Query: 304 PVEDDSSSSYSSGLTLDLRLGL 321
           PVED SSSSYSSGLTLDLRLGL
Sbjct: 303 PVEDASSSSYSSGLTLDLRLGL 296

[Close]

BLAST of MS022233.1 vs. NCBI nr
Match: XP_023554558.1 (zinc finger protein ZAT3-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 373.2 bits (957), Expect = 2.2e-99
Identity = 210/322 (65.22%), Postives = 244/322 (75.78%), Query Frame = 0


Query: 4   ADIHSAAIASSTTS-LDLAFPFQLRMAELTSVFPSSPSTFDTITASKRRHNPRKKRSGID 63
           +DI+S AI+SS++S LDLA PFQL + E         +TFD    SKRRHNPRKKRS  +
Sbjct: 3   SDINSLAISSSSSSALDLAIPFQLGIVE---------TTFD----SKRRHNPRKKRSRTE 62

Query: 64  NGGVTGSGVSKPKYSKKPPDPRSPKITPPCTECGKKFWSDKALFGHMRCHPERQWRGINP 123
           N      G SK KY KK PDP +PKITPPC+ECG++FWSDKALFGHMRCHPERQWRGINP
Sbjct: 63  NASTAVVG-SKAKYRKK-PDPSAPKITPPCSECGRRFWSDKALFGHMRCHPERQWRGINP 122

Query: 124 PINFVRRPISVSPRRSPTAGL-EAAITEEEQDIADCLIMLANSPNIAIDKIPELDGVGTT 183
           P++F RR +SVSP R P A L E+A TEEEQD+A+CL++LA+ P+ AI ++ +       
Sbjct: 123 PVSF-RRSVSVSPFR-PRADLEESAFTEEEQDVANCLLVLADCPS-AIARVSDF------ 182

Query: 184 CRFECSSCKKVFGSHQALGGHRASHKNVKGCFAIARGDEETEEHQFQSAALYGHERNSNL 243
            RFEC+SCKKVFGSHQALGGHRASHKNV+GC A+A+ DEE E          GH+ + NL
Sbjct: 183 -RFECASCKKVFGSHQALGGHRASHKNVRGCSAMAKSDEEIEHDALFGHC--GHDLSINL 242

Query: 244 EDRMSMFFG--IGHKCSICMRVFASGQALGGHKRCHWERVEENTAT-EGCANLDLNLPPA 303
           ED+MSM  G   GHKCS+CMRVFASGQALGGH RCHWERVEEN AT EG  NLDLN+ PA
Sbjct: 243 EDKMSMILGTAAGHKCSVCMRVFASGQALGGHMRCHWERVEENAATEEGFLNLDLNM-PA 296

Query: 304 PVEDDSSSSYSSGLTLDLRLGL 321
           PVED SSSSYSSGLTLDLRLGL
Sbjct: 303 PVEDGSSSSYSSGLTLDLRLGL 296

[Close]

BLAST of MS022233.1 vs. NCBI nr
Match: XP_022969191.1 (zinc finger protein ZAT3-like [Cucurbita maxima])

HSP 1 Score: 371.3 bits (952), Expect = 8.3e-99
Identity = 209/322 (64.91%), Postives = 242/322 (75.16%), Query Frame = 0


Query: 4   ADIHSAAIASSTTS-LDLAFPFQLRMAELTSVFPSSPSTFDTITASKRRHNPRKKRSGID 63
           +DI+S AI+SS++S LDLA PFQL + E         +TFD    SKRRHNPRKKRS  +
Sbjct: 3   SDINSLAISSSSSSALDLAIPFQLGIVE---------TTFD----SKRRHNPRKKRSRTE 62

Query: 64  NGGVTGSGVSKPKYSKKPPDPRSPKITPPCTECGKKFWSDKALFGHMRCHPERQWRGINP 123
           N      G SK KY KK PDP +PKITPPC+ECG++FWSDKALFGHMRCHPERQWRGINP
Sbjct: 63  NASTAVVG-SKAKYRKK-PDPTAPKITPPCSECGRRFWSDKALFGHMRCHPERQWRGINP 122

Query: 124 PINFVRRPISVSPRRSPTAGLEA-AITEEEQDIADCLIMLANSPNIAIDKIPELDGVGTT 183
           P+ F  R +SVSP R P   LEA A TEEEQD+A+CL++LA+ P+ AI ++ +       
Sbjct: 123 PVRF-HRSVSVSPFR-PRVDLEASAFTEEEQDVANCLLVLADCPS-AIARVSDF------ 182

Query: 184 CRFECSSCKKVFGSHQALGGHRASHKNVKGCFAIARGDEETEEHQFQSAALYGHERNSNL 243
            RFEC+SCKKVFGSHQALGGHRASHKNV+GC A+A+ DEE E+         GH+ + NL
Sbjct: 183 -RFECASCKKVFGSHQALGGHRASHKNVRGCSAMAKSDEEIEDDALFGHC--GHDLSINL 242

Query: 244 EDRMSMFFG--IGHKCSICMRVFASGQALGGHKRCHWERVEENTAT-EGCANLDLNLPPA 303
           ED+MSM  G   GHKCS+CMRVFASGQALGGH RCHWERVEEN AT EG  NLDLN+ PA
Sbjct: 243 EDKMSMILGTAAGHKCSVCMRVFASGQALGGHMRCHWERVEENAATEEGFLNLDLNM-PA 296

Query: 304 PVEDDSSSSYSSGLTLDLRLGL 321
           PVED SSSSYSSGLTLDLRLGL
Sbjct: 303 PVEDGSSSSYSSGLTLDLRLGL 296

[Close]

BLAST of MS022233.1 vs. NCBI nr
Match: XP_022953009.1 (zinc finger protein ZAT3-like [Cucurbita moschata])

HSP 1 Score: 368.2 bits (944), Expect = 7.0e-98
Identity = 208/322 (64.60%), Postives = 242/322 (75.16%), Query Frame = 0


Query: 4   ADIHSAAIASSTTS-LDLAFPFQLRMAELTSVFPSSPSTFDTITASKRRHNPRKKRSGID 63
           +D++S AI+SS++S LDLA PFQL + E         STFD    SK RHNPRKKRS  +
Sbjct: 44  SDMNSLAISSSSSSALDLAIPFQLGIVE---------STFD----SKGRHNPRKKRSRTE 103

Query: 64  NGGVTGSGVSKPKYSKKPPDPRSPKITPPCTECGKKFWSDKALFGHMRCHPERQWRGINP 123
           N      G SK KY KK PDP +PKITPPC+ECG++FWSDKALFGHMRCHPERQWRGINP
Sbjct: 104 NASTAAVG-SKAKYRKK-PDPTAPKITPPCSECGRRFWSDKALFGHMRCHPERQWRGINP 163

Query: 124 PINFVRRPISVSPRRSPTAGL-EAAITEEEQDIADCLIMLANSPNIAIDKIPELDGVGTT 183
           P++F RR +SVSP R P A L E+A TEEEQD+A+CL++LA+ P+ AI ++ +       
Sbjct: 164 PVSF-RRSVSVSPFR-PRADLEESAFTEEEQDVANCLLVLADCPS-AIARVSDF------ 223

Query: 184 CRFECSSCKKVFGSHQALGGHRASHKNVKGCFAIARGDEETEEHQFQSAALYGHERNSNL 243
            RFEC+SCKKVF SHQALGGHRASHKNV+GC A+A+ DEE E          GH+ + NL
Sbjct: 224 -RFECASCKKVFRSHQALGGHRASHKNVRGCSAMAKSDEEIEHDALFGHC--GHDLSINL 283

Query: 244 EDRMSMFFG--IGHKCSICMRVFASGQALGGHKRCHWERVEENTAT-EGCANLDLNLPPA 303
           ED+MSM  G   GHKCS+CMRVFASGQALGGH RCHWERVEEN AT EG  NLDLN+ PA
Sbjct: 284 EDKMSMILGTAAGHKCSVCMRVFASGQALGGHMRCHWERVEENAATEEGFLNLDLNM-PA 337

Query: 304 PVEDDSSSSYSSGLTLDLRLGL 321
           PVED SSSSYSSGLTLDLRLGL
Sbjct: 344 PVEDASSSSYSSGLTLDLRLGL 337

[Close]

BLAST of MS022233.1 vs. NCBI nr
Match: KAG7011807.1 (Zinc finger protein ZAT3, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 367.5 bits (942), Expect = 1.2e-97
Identity = 203/309 (65.70%), Postives = 233/309 (75.40%), Query Frame = 0


Query: 16  TSLDLAFPFQLRMAELTSVFPSSPSTFDTITASKRRHNPRKKRSGIDNGGVTGSGVSKPK 75
           ++LDLA PFQL + E         STFD    SKRRHNPRKKRS  +N      G SK K
Sbjct: 19  SALDLAIPFQLGIVE---------STFD----SKRRHNPRKKRSRTENASTAAVG-SKAK 78

Query: 76  YSKKPPDPRSPKITPPCTECGKKFWSDKALFGHMRCHPERQWRGINPPINFVRRPISVSP 135
           Y KK PDP +PKITPPC+ECG++FWSDKALFGHMRCHPERQWRGINPP++F RR +SVSP
Sbjct: 79  YRKK-PDPTAPKITPPCSECGRRFWSDKALFGHMRCHPERQWRGINPPVSF-RRSVSVSP 138

Query: 136 RRSPTAGL-EAAITEEEQDIADCLIMLANSPNIAIDKIPELDGVGTTCRFECSSCKKVFG 195
            R P A L E+A TEEEQD+A+CL++LA+ P+ AI ++ +        RFEC+SCKKVFG
Sbjct: 139 FR-PRADLEESAFTEEEQDVANCLLVLADCPS-AIARVSDF-------RFECASCKKVFG 198

Query: 196 SHQALGGHRASHKNVKGCFAIARGDEETEEHQFQSAALYGHERNSNLEDRMSMFFG--IG 255
           SHQALGGHRASHKNV+GC A+A+ DEE E          GH+ + NLED+MSM  G   G
Sbjct: 199 SHQALGGHRASHKNVRGCSAMAKSDEEIEHDALFGHC--GHDLSINLEDKMSMILGTAAG 258

Query: 256 HKCSICMRVFASGQALGGHKRCHWERVEENTAT-EGCANLDLNLPPAPVEDDSSSSYSSG 315
           HKCS+CMRVFASGQALGGH RCHWERVEEN AT EG  NLDLN+ PAPVED SSSSYSSG
Sbjct: 259 HKCSVCMRVFASGQALGGHMRCHWERVEENAATEEGFLNLDLNM-PAPVEDASSSSYSSG 299

Query: 316 LTLDLRLGL 321
           LTLDLRLGL
Sbjct: 319 LTLDLRLGL 299

[Close]

BLAST of MS022233.1 vs. ExPASy Swiss-Prot
Match: O65499 (Zinc finger protein ZAT3 OS=Arabidopsis thaliana OX=3702 GN=ZAT3 PE=1 SV=1)

HSP 1 Score: 247.7 bits (631), Expect = 1.8e-64
Identity = 140/278 (50.36%), Postives = 174/278 (62.59%), Query Frame = 0


Query: 47  ASKRRHNPRKKRSG--IDNGGVTGSGVSKPKYSKKPPDPRSPKITPPCTECGKKFWSDKA 106
           +S   H+P+KKR+     +   +    SKPKY+KK PDP +PKIT PCTECG+KFWS KA
Sbjct: 33  SSSYDHSPKKKRTKTVASSSSSSPKSASKPKYTKK-PDPNAPKITRPCTECGRKFWSWKA 92

Query: 107 LFGHMRCHPERQWRGINPPINFVRRPISVSPRR--SPTAGLEAAITEEEQDIADCLIMLA 166
           LFGHMRCHPERQWRGINPP N+ R P + S ++         + ++EE+ ++A CL+ML+
Sbjct: 93  LFGHMRCHPERQWRGINPPPNY-RVPTAASSKQLNQILPNWVSFMSEEDHEVASCLLMLS 152

Query: 167 NSPNIAIDKIPELDGVGTTCRFECSSCKKVFGSHQALGGHRASHKNVKGCFAIARGDEET 226
           N         P    +    RFEC  CKKVFGSHQALGGHRASHKNVKGCFAI    ++ 
Sbjct: 153 NG-------TPSSSSIE---RFECGGCKKVFGSHQALGGHRASHKNVKGCFAITNVTDDP 212

Query: 227 EEHQFQSAALYGHERNSNLEDRMSMFFGIGHKCSICMRVFASGQALGGHKRCHWERVEEN 286
                 S    GH+    +     + F   HKC+IC RVF+SGQALGGH RCHWE+ EE 
Sbjct: 213 MTVSTSS----GHDHQGKI-----LTFSGHHKCNICFRVFSSGQALGGHMRCHWEKEEEP 272

Query: 287 TATEGCANLDLNLPPAPVEDDSSSSYSSGLTLDLRLGL 321
             +     LDLN+P  P   D S+S +SG  LDLRLGL
Sbjct: 273 MIS---GALDLNVP--PTIQDLSTSDTSGCCLDLRLGL 284

[Close]

BLAST of MS022233.1 vs. ExPASy Swiss-Prot
Match: Q9SIJ0 (Zinc finger protein ZAT2 OS=Arabidopsis thaliana OX=3702 GN=ZAT2 PE=1 SV=1)

HSP 1 Score: 225.3 bits (573), Expect = 9.6e-58
Identity = 132/295 (44.75%), Postives = 171/295 (57.97%), Query Frame = 0


Query: 28  MAELTSVFPSS--PSTFDTITASKRRHNPRKKRSGIDNGGVTGSGVSKPKYSKKPPDPRS 87
           M+  ++  P+S  P     +T      NPR+KR+ + N  V  S  S        PDP +
Sbjct: 1   MSNTSNSDPNSDIPFASSNVTLPSYNQNPRRKRTKLTNNEVGSSSSSPRPKPVTQPDPDA 60

Query: 88  PKITPPCTECGKKFWSDKALFGHMRCHPERQWRGINPPINFVRRPISVSPRRSPTAGLEA 147
            +I  PCTECGK+F S KALFGHMRCHPERQWRGINPP NF RR  S     + ++    
Sbjct: 61  SQIARPCTECGKQFGSLKALFGHMRCHPERQWRGINPPSNFKRRINS----NAASSSSSW 120

Query: 148 AITEEEQDIADCLIMLANSPNIAIDKIPELDGVGTTCRFECSSCKKVFGSHQALGGHRAS 207
             +EEE +IA CL+M+AN       +  E++      RFEC  CKKVFGSHQALGGHRA+
Sbjct: 121 DPSEEEHNIASCLLMMANGD--VPTRSSEVEE-----RFECDGCKKVFGSHQALGGHRAT 180

Query: 208 HKNVKGCFAIARGDEETEEHQFQSAALYGHERNSNLEDRMSMFFGIGHKCSICMRVFASG 267
           HK+VKGCFA     E+      Q         + +    + +  G+ H+C+IC RVF+SG
Sbjct: 181 HKDVKGCFANKNITEDPPPPPPQEIV------DQDKGKSVKLVSGMNHRCNICSRVFSSG 240

Query: 268 QALGGHKRCHWERVEENTATEGCANLDLNLPPAPVEDDSSSSYSSGLTLDLRLGL 321
           QALGGH RCHWE+ +E     G   +DLN+P A     +SS  + G +LDLRLGL
Sbjct: 241 QALGGHMRCHWEKDQEENQVRG---IDLNVPAA-----TSSDTTLGCSLDLRLGL 270

[Close]

BLAST of MS022233.1 vs. ExPASy Swiss-Prot
Match: Q9M202 (Zinc finger protein ZAT9 OS=Arabidopsis thaliana OX=3702 GN=ZAT9 PE=2 SV=1)

HSP 1 Score: 87.0 bits (214), Expect = 4.1e-16
Identity = 66/187 (35.29%), Postives = 94/187 (50.27%), Query Frame = 0


Query: 145 AAITEEEQDIADCLIMLA-------NSPNIAIDKIP---------ELDGVGTTCRFECSS 204
           A+ T  E+D+A CL+ML+        S    +++I          +++   T  R++C +
Sbjct: 118 ASDTTTEEDLAFCLMMLSRDKWKKNKSNKEVVEEIETEEESEGYNKINRATTKGRYKCET 177

Query: 205 CKKVFGSHQALGGHRASHKNVKGCFAIARGDEETEEHQFQSAALYGHERNSNLEDRMSMF 264
           C KVF S+QALGGHRASHK  +        + +TE            +R+    D + + 
Sbjct: 178 CGKVFKSYQALGGHRASHKKNR------VSNNKTE------------QRSETEYDNVVVV 237

Query: 265 FGIGHKCSICMRVFASGQALGGHKRCH---------WERVEENTATEGCANLDLNLPPAP 307
               H+C IC+RVFASGQALGGHKR H           RV  N + +    +DLNL PAP
Sbjct: 238 AKRIHECPICLRVFASGQALGGHKRSHGVGNLSVNQQRRVHRNESVKQ-RMIDLNL-PAP 284

[Close]

BLAST of MS022233.1 vs. ExPASy Swiss-Prot
Match: Q9SHD0 (Zinc finger protein ZAT4 OS=Arabidopsis thaliana OX=3702 GN=ZAT4 PE=2 SV=1)

HSP 1 Score: 86.7 bits (213), Expect = 5.4e-16
Identity = 65/189 (34.39%), Postives = 89/189 (47.09%), Query Frame = 0


Query: 145 AAITEEEQDIADCLIMLA---------NSPNIAIDKI----PELDGVGTTCRFECSSCKK 204
           A+ T  E+D+A CLIML+             +  D+      +     +  RF+C +C K
Sbjct: 142 ASDTTTEEDLAFCLIMLSRDKWKQQKKKKQRVEEDETDHDSEDYKSSKSRGRFKCETCGK 201

Query: 205 VFGSHQALGGHRASHKNVKGCFAIARGDEETEEHQFQSAALYGHERNSNLEDRMSMFFGI 264
           VF S+QALGGHRASHK  K C         T+  Q ++  + G +               
Sbjct: 202 VFKSYQALGGHRASHKKNKACM--------TKTEQVETEYVLGVKEKK------------ 261

Query: 265 GHKCSICMRVFASGQALGGHKRCHWE--------------RVEENTATEGCANLDLNLPP 307
            H+C IC RVF SGQALGGHKR H                ++EE  + +    +DLNL P
Sbjct: 262 VHECPICFRVFTSGQALGGHKRSHGSNIGAGRGLSVSQIVQIEEEVSVKQ-RMIDLNL-P 308

[Close]

BLAST of MS022233.1 vs. ExPASy Swiss-Prot
Match: Q96289 (Zinc finger protein ZAT10 OS=Arabidopsis thaliana OX=3702 GN=ZAT10 PE=2 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 2.0e-15
Identity = 60/172 (34.88%), Postives = 78/172 (45.35%), Query Frame = 0


Query: 150 EEQDIADCLIMLANS-----PNIAIDKIPELDGVGTTCRFECSSCKKVFGSHQALGGHRA 209
           EE+ +A CL++LA       P  A++K+           ++CS C K F S+QALGGH+A
Sbjct: 51  EEEYLAFCLMLLARDNRQPPPPPAVEKL----------SYKCSVCDKTFSSYQALGGHKA 110

Query: 210 SH-KNVKGCFAIARGDEETEEHQFQSAALYGHERNSNLEDRMSMFFGIGHKCSICMRVFA 269
           SH KN+    +    D  T      SA   G               G  H C+IC + F 
Sbjct: 111 SHRKNLSQTLSGGGDDHSTSSATTTSAVTTGS--------------GKSHVCTICNKSFP 170

Query: 270 SGQALGGHKRCHWERVEENTATEGCAN----------------LDLNLPPAP 300
           SGQALGGHKRCH+E    N  T   +N                 DLN+PP P
Sbjct: 171 SGQALGGHKRCHYEG-NNNINTSSVSNSEGAGSTSHVSSSHRGFDLNIPPIP 197

[Close]

BLAST of MS022233.1 vs. ExPASy TrEMBL
Match: A0A6J1HX25 (zinc finger protein ZAT3-like OS=Cucurbita maxima OX=3661 GN=LOC111468261 PE=4 SV=1)

HSP 1 Score: 371.3 bits (952), Expect = 4.0e-99
Identity = 209/322 (64.91%), Postives = 242/322 (75.16%), Query Frame = 0


Query: 4   ADIHSAAIASSTTS-LDLAFPFQLRMAELTSVFPSSPSTFDTITASKRRHNPRKKRSGID 63
           +DI+S AI+SS++S LDLA PFQL + E         +TFD    SKRRHNPRKKRS  +
Sbjct: 3   SDINSLAISSSSSSALDLAIPFQLGIVE---------TTFD----SKRRHNPRKKRSRTE 62

Query: 64  NGGVTGSGVSKPKYSKKPPDPRSPKITPPCTECGKKFWSDKALFGHMRCHPERQWRGINP 123
           N      G SK KY KK PDP +PKITPPC+ECG++FWSDKALFGHMRCHPERQWRGINP
Sbjct: 63  NASTAVVG-SKAKYRKK-PDPTAPKITPPCSECGRRFWSDKALFGHMRCHPERQWRGINP 122

Query: 124 PINFVRRPISVSPRRSPTAGLEA-AITEEEQDIADCLIMLANSPNIAIDKIPELDGVGTT 183
           P+ F  R +SVSP R P   LEA A TEEEQD+A+CL++LA+ P+ AI ++ +       
Sbjct: 123 PVRF-HRSVSVSPFR-PRVDLEASAFTEEEQDVANCLLVLADCPS-AIARVSDF------ 182

Query: 184 CRFECSSCKKVFGSHQALGGHRASHKNVKGCFAIARGDEETEEHQFQSAALYGHERNSNL 243
            RFEC+SCKKVFGSHQALGGHRASHKNV+GC A+A+ DEE E+         GH+ + NL
Sbjct: 183 -RFECASCKKVFGSHQALGGHRASHKNVRGCSAMAKSDEEIEDDALFGHC--GHDLSINL 242

Query: 244 EDRMSMFFG--IGHKCSICMRVFASGQALGGHKRCHWERVEENTAT-EGCANLDLNLPPA 303
           ED+MSM  G   GHKCS+CMRVFASGQALGGH RCHWERVEEN AT EG  NLDLN+ PA
Sbjct: 243 EDKMSMILGTAAGHKCSVCMRVFASGQALGGHMRCHWERVEENAATEEGFLNLDLNM-PA 296

Query: 304 PVEDDSSSSYSSGLTLDLRLGL 321
           PVED SSSSYSSGLTLDLRLGL
Sbjct: 303 PVEDGSSSSYSSGLTLDLRLGL 296

[Close]

BLAST of MS022233.1 vs. ExPASy TrEMBL
Match: A0A6J1GNF2 (zinc finger protein ZAT3-like OS=Cucurbita moschata OX=3662 GN=LOC111455526 PE=4 SV=1)

HSP 1 Score: 368.2 bits (944), Expect = 3.4e-98
Identity = 208/322 (64.60%), Postives = 242/322 (75.16%), Query Frame = 0


Query: 4   ADIHSAAIASSTTS-LDLAFPFQLRMAELTSVFPSSPSTFDTITASKRRHNPRKKRSGID 63
           +D++S AI+SS++S LDLA PFQL + E         STFD    SK RHNPRKKRS  +
Sbjct: 44  SDMNSLAISSSSSSALDLAIPFQLGIVE---------STFD----SKGRHNPRKKRSRTE 103

Query: 64  NGGVTGSGVSKPKYSKKPPDPRSPKITPPCTECGKKFWSDKALFGHMRCHPERQWRGINP 123
           N      G SK KY KK PDP +PKITPPC+ECG++FWSDKALFGHMRCHPERQWRGINP
Sbjct: 104 NASTAAVG-SKAKYRKK-PDPTAPKITPPCSECGRRFWSDKALFGHMRCHPERQWRGINP 163

Query: 124 PINFVRRPISVSPRRSPTAGL-EAAITEEEQDIADCLIMLANSPNIAIDKIPELDGVGTT 183
           P++F RR +SVSP R P A L E+A TEEEQD+A+CL++LA+ P+ AI ++ +       
Sbjct: 164 PVSF-RRSVSVSPFR-PRADLEESAFTEEEQDVANCLLVLADCPS-AIARVSDF------ 223

Query: 184 CRFECSSCKKVFGSHQALGGHRASHKNVKGCFAIARGDEETEEHQFQSAALYGHERNSNL 243
            RFEC+SCKKVF SHQALGGHRASHKNV+GC A+A+ DEE E          GH+ + NL
Sbjct: 224 -RFECASCKKVFRSHQALGGHRASHKNVRGCSAMAKSDEEIEHDALFGHC--GHDLSINL 283

Query: 244 EDRMSMFFG--IGHKCSICMRVFASGQALGGHKRCHWERVEENTAT-EGCANLDLNLPPA 303
           ED+MSM  G   GHKCS+CMRVFASGQALGGH RCHWERVEEN AT EG  NLDLN+ PA
Sbjct: 284 EDKMSMILGTAAGHKCSVCMRVFASGQALGGHMRCHWERVEENAATEEGFLNLDLNM-PA 337

Query: 304 PVEDDSSSSYSSGLTLDLRLGL 321
           PVED SSSSYSSGLTLDLRLGL
Sbjct: 344 PVEDASSSSYSSGLTLDLRLGL 337

[Close]

BLAST of MS022233.1 vs. ExPASy TrEMBL
Match: A0A7N2N084 (Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1)

HSP 1 Score: 308.1 bits (788), Expect = 4.2e-80
Identity = 179/316 (56.65%), Postives = 208/316 (65.82%), Query Frame = 0


Query: 36  PSSPSTFDTITASKRRHNPRKKRSGI----DNGGVTGSGVSKPKYSKKPPDPRSPKITPP 95
           PS PS    +   K R  PRKKR+ +    D    + +GV KPKYSKK PDP +PKIT P
Sbjct: 17  PSPPSLDVAVVPEKPRQKPRKKRTKLIRIDDTSTGSSTGVGKPKYSKK-PDPGAPKITRP 76

Query: 96  CTECGKKFWSDKALFGHMRCHPERQWRGINPPINFVRRPISVSPRRSPTAGLEAAITEEE 155
           C+ECGKKFWS KALFGHMRCHPERQWRGINPP N +RRP   SP   P A +  A++EE+
Sbjct: 77  CSECGKKFWSWKALFGHMRCHPERQWRGINPPPN-LRRP--GSPSGQPVAVMAPAVSEED 136

Query: 156 QDIADCLIMLANSPNIAIDKI---PELDGV--------------GTTCRFECSSCKKVFG 215
            +IA CL+MLA+  + A ++     E DG               G  CRFECSSCKKVFG
Sbjct: 137 HEIAACLLMLASGVDRASERSIIEAEFDGFFRESVAAVEMVGPPGMGCRFECSSCKKVFG 196

Query: 216 SHQALGGHRASHKNVKGCFAIAR--GDEETEEHQFQSAALYGHERNSN------LEDRMS 275
           SHQALGGHRASHKNVKGCFAI R    +  E    Q  ++ GH  N         E++M 
Sbjct: 197 SHQALGGHRASHKNVKGCFAITRSSASDGDEFDNIQDQSVVGHGDNERDIGAALEEEKML 256

Query: 276 MFFGIGHKCSICMRVFASGQALGGHKRCHWERVEENTATEGCANLDLNLPPAPVEDDSSS 321
           M  G GHKCSIC+RVF+SGQALGGHKRCHWE+ EE   T G   LDLN+ PAP+ED SSS
Sbjct: 257 MVLG-GHKCSICLRVFSSGQALGGHKRCHWEKGEEGVTTCG---LDLNM-PAPMEDGSSS 316

[Close]

BLAST of MS022233.1 vs. ExPASy TrEMBL
Match: A0A2N9I964 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS48273 PE=4 SV=1)

HSP 1 Score: 307.8 bits (787), Expect = 5.5e-80
Identity = 183/324 (56.48%), Postives = 212/324 (65.43%), Query Frame = 0


Query: 35  FPSSPSTFDTITAS------KRRHNPRKKRS---GIDNGGVTGSGVSKPKYSKKPPDPRS 94
           FP SP     + A+      K R  PRKKRS    ID+   +GSG  KPKYSKK PDP +
Sbjct: 11  FPPSPCRDIVVAATAFAHVEKTRQKPRKKRSKLIRIDDMIASGSG-GKPKYSKK-PDPGA 70

Query: 95  PKITPPCTECGKKFWSDKALFGHMRCHPERQWRGINPPINFVRRPISVSPRRSPTAGLEA 154
           PKIT PC+ECGKKFWS KALFGHMRCHPERQWRGINPP NF RRPIS  P       + A
Sbjct: 71  PKITRPCSECGKKFWSWKALFGHMRCHPERQWRGINPPSNF-RRPISPQPLPLAVMPVSA 130

Query: 155 AITEEEQDIADCLIMLAN--------SPNIAIDKI-------PELDGV------------ 214
            ++EE+ +IA CL+MLA+        + N +            E DG+            
Sbjct: 131 VMSEEDHEIAACLLMLASGAHESNWVNENESTKSFGTYQGFQSEFDGLVREAAVEMAGPS 190

Query: 215 GTTCRFECSSCKKVFGSHQALGGHRASHKNVKGCFAIARGDEETE-EHQFQSAALYGHER 274
           G  CRFECSSCKKVFGSHQALGGHRASHKNVKGCFAI R  +  E ++Q Q+     HER
Sbjct: 191 GMGCRFECSSCKKVFGSHQALGGHRASHKNVKGCFAITRSSDGDEVDNQDQNGGHGDHER 250

Query: 275 NSNLEDRMSMFFGIGHKCSICMRVFASGQALGGHKRCHWERVEENTATEGCANLDLNLPP 321
           ++  E++M M  G GH CSIC+RVF+SGQALGGHKRCHWE+ +E   T  C  LDLN+ P
Sbjct: 251 DNVEEEKMLMVLG-GHTCSICLRVFSSGQALGGHKRCHWEKGDEGVNT--CGALDLNM-P 310

[Close]

BLAST of MS022233.1 vs. ExPASy TrEMBL
Match: A0A7J7H281 (Uncharacterized protein OS=Camellia sinensis OX=4442 GN=HYC85_017298 PE=4 SV=1)

HSP 1 Score: 305.8 bits (782), Expect = 2.1e-79
Identity = 184/338 (54.44%), Postives = 209/338 (61.83%), Query Frame = 0


Query: 34  VFPSSPSTFDTITASKRRHNPRKKRSGIDNGGVT---GSGV--SKPKYSKKPPDPRSPKI 93
           +FP  PS      A+    NPRKKR+ +   GVT   G GV  +KPK  KK PDP +PKI
Sbjct: 22  IFPRFPSLG---VATANHQNPRKKRTKLIPIGVTSSSGGGVATAKPKCGKK-PDPSAPKI 81

Query: 94  TPPCTECGKKFWSDKALFGHMRCHPERQWRGINPPINFVRRPISVSPRRSPTAGLEAAIT 153
           T PC+ECGKKFWS KALFGHMRCHPERQWRGINPP NF RRP       SP    +A +T
Sbjct: 82  TRPCSECGKKFWSWKALFGHMRCHPERQWRGINPPPNF-RRP------TSPEISGDARMT 141

Query: 154 EEEQDIADCLIMLANSPN---------------------IAIDKIPELDGVG------TT 213
            E+ ++A CL+MLANSP                      +  DK     G G        
Sbjct: 142 PEDHEVAACLLMLANSPTAFETQCAATTTATMLESDTVVVRDDKAAASGGGGDGDNLDVN 201

Query: 214 CRFECSSCKKVFGSHQALGGHRASHKNVKGCFAIARGDEE---TEEHQFQSAALYG---- 273
           CRFECSSCKKVFGSHQALGGHRASHKNVKGCFAI R D E     +H+  S    G    
Sbjct: 202 CRFECSSCKKVFGSHQALGGHRASHKNVKGCFAITRSDGEEVVALDHERSSGGGGGEGEV 261

Query: 274 --HERNSNLEDRMSMFFGIGHKCSICMRVFASGQALGGHKRCHWERVEE----------N 321
              E     ED+M M   +GHKCSIC+RVF+SGQALGGHKRCHWE+ +E           
Sbjct: 262 VMRENGGEEEDKMVMV--LGHKCSICLRVFSSGQALGGHKRCHWEKGDEPSSQGLNPYGP 321

[Close]

BLAST of MS022233.1 vs. TAIR 10
Match: AT4G35280.1 (C2H2-like zinc finger protein )

HSP 1 Score: 247.7 bits (631), Expect = 1.3e-65
Identity = 140/278 (50.36%), Postives = 174/278 (62.59%), Query Frame = 0


Query: 47  ASKRRHNPRKKRSG--IDNGGVTGSGVSKPKYSKKPPDPRSPKITPPCTECGKKFWSDKA 106
           +S   H+P+KKR+     +   +    SKPKY+KK PDP +PKIT PCTECG+KFWS KA
Sbjct: 33  SSSYDHSPKKKRTKTVASSSSSSPKSASKPKYTKK-PDPNAPKITRPCTECGRKFWSWKA 92

Query: 107 LFGHMRCHPERQWRGINPPINFVRRPISVSPRR--SPTAGLEAAITEEEQDIADCLIMLA 166
           LFGHMRCHPERQWRGINPP N+ R P + S ++         + ++EE+ ++A CL+ML+
Sbjct: 93  LFGHMRCHPERQWRGINPPPNY-RVPTAASSKQLNQILPNWVSFMSEEDHEVASCLLMLS 152

Query: 167 NSPNIAIDKIPELDGVGTTCRFECSSCKKVFGSHQALGGHRASHKNVKGCFAIARGDEET 226
           N         P    +    RFEC  CKKVFGSHQALGGHRASHKNVKGCFAI    ++ 
Sbjct: 153 NG-------TPSSSSIE---RFECGGCKKVFGSHQALGGHRASHKNVKGCFAITNVTDDP 212

Query: 227 EEHQFQSAALYGHERNSNLEDRMSMFFGIGHKCSICMRVFASGQALGGHKRCHWERVEEN 286
                 S    GH+    +     + F   HKC+IC RVF+SGQALGGH RCHWE+ EE 
Sbjct: 213 MTVSTSS----GHDHQGKI-----LTFSGHHKCNICFRVFSSGQALGGHMRCHWEKEEEP 272

Query: 287 TATEGCANLDLNLPPAPVEDDSSSSYSSGLTLDLRLGL 321
             +     LDLN+P  P   D S+S +SG  LDLRLGL
Sbjct: 273 MIS---GALDLNVP--PTIQDLSTSDTSGCCLDLRLGL 284

[Close]

BLAST of MS022233.1 vs. TAIR 10
Match: AT2G17180.1 (C2H2-like zinc finger protein )

HSP 1 Score: 225.3 bits (573), Expect = 6.8e-59
Identity = 132/295 (44.75%), Postives = 171/295 (57.97%), Query Frame = 0


Query: 28  MAELTSVFPSS--PSTFDTITASKRRHNPRKKRSGIDNGGVTGSGVSKPKYSKKPPDPRS 87
           M+  ++  P+S  P     +T      NPR+KR+ + N  V  S  S        PDP +
Sbjct: 1   MSNTSNSDPNSDIPFASSNVTLPSYNQNPRRKRTKLTNNEVGSSSSSPRPKPVTQPDPDA 60

Query: 88  PKITPPCTECGKKFWSDKALFGHMRCHPERQWRGINPPINFVRRPISVSPRRSPTAGLEA 147
            +I  PCTECGK+F S KALFGHMRCHPERQWRGINPP NF RR  S     + ++    
Sbjct: 61  SQIARPCTECGKQFGSLKALFGHMRCHPERQWRGINPPSNFKRRINS----NAASSSSSW 120

Query: 148 AITEEEQDIADCLIMLANSPNIAIDKIPELDGVGTTCRFECSSCKKVFGSHQALGGHRAS 207
             +EEE +IA CL+M+AN       +  E++      RFEC  CKKVFGSHQALGGHRA+
Sbjct: 121 DPSEEEHNIASCLLMMANGD--VPTRSSEVEE-----RFECDGCKKVFGSHQALGGHRAT 180

Query: 208 HKNVKGCFAIARGDEETEEHQFQSAALYGHERNSNLEDRMSMFFGIGHKCSICMRVFASG 267
           HK+VKGCFA     E+      Q         + +    + +  G+ H+C+IC RVF+SG
Sbjct: 181 HKDVKGCFANKNITEDPPPPPPQEIV------DQDKGKSVKLVSGMNHRCNICSRVFSSG 240

Query: 268 QALGGHKRCHWERVEENTATEGCANLDLNLPPAPVEDDSSSSYSSGLTLDLRLGL 321
           QALGGH RCHWE+ +E     G   +DLN+P A     +SS  + G +LDLRLGL
Sbjct: 241 QALGGHMRCHWEKDQEENQVRG---IDLNVPAA-----TSSDTTLGCSLDLRLGL 270

[Close]

BLAST of MS022233.1 vs. TAIR 10
Match: AT1G02040.1 (C2H2-type zinc finger family protein )

HSP 1 Score: 114.4 bits (285), Expect = 1.7e-25
Identity = 71/176 (40.34%), Postives = 96/176 (54.55%), Query Frame = 0


Query: 118 RGINPPINFVRRPISVSPRRSPTAGLEAAIT-EEEQDIADCLIMLANSPNIAIDKIPELD 177
           RG +   N  RRP     R   T      ++  E++++A+CL++L+NS +       +  
Sbjct: 74  RGQHDEDNMSRRPPWKRERSMSTQHHHLNLSPNEDEELANCLVLLSNSGDAHGGDQHKQH 133

Query: 178 GVG---------TTCRFECSSCKKVFGSHQALGGHRASHKNVKGCFAIARGDEETEEHQF 237
           G G         T   F+C +CKKVF SHQALGGHRASHK VKGCFA ++  EE EE ++
Sbjct: 134 GHGKGKTVKKQKTAQVFQCKACKKVFTSHQALGGHRASHKKVKGCFA-SQDKEEEEEEEY 193

Query: 238 QSAALYGHERNSNLED-------RMSMFFGIGHKCSICMRVFASGQALGGHKRCHW 277
           +       E     ED        ++      H+C+IC RVF+SGQALGGHKRCHW
Sbjct: 194 KEDDDDNDEDEDEEEDEEDKSTAHIARKRSNAHECTICHRVFSSGQALGGHKRCHW 248

[Close]

BLAST of MS022233.1 vs. TAIR 10
Match: AT3G60580.1 (C2H2-like zinc finger protein )

HSP 1 Score: 87.0 bits (214), Expect = 2.9e-17
Identity = 66/187 (35.29%), Postives = 94/187 (50.27%), Query Frame = 0


Query: 145 AAITEEEQDIADCLIMLA-------NSPNIAIDKIP---------ELDGVGTTCRFECSS 204
           A+ T  E+D+A CL+ML+        S    +++I          +++   T  R++C +
Sbjct: 118 ASDTTTEEDLAFCLMMLSRDKWKKNKSNKEVVEEIETEEESEGYNKINRATTKGRYKCET 177

Query: 205 CKKVFGSHQALGGHRASHKNVKGCFAIARGDEETEEHQFQSAALYGHERNSNLEDRMSMF 264
           C KVF S+QALGGHRASHK  +        + +TE            +R+    D + + 
Sbjct: 178 CGKVFKSYQALGGHRASHKKNR------VSNNKTE------------QRSETEYDNVVVV 237

Query: 265 FGIGHKCSICMRVFASGQALGGHKRCH---------WERVEENTATEGCANLDLNLPPAP 307
               H+C IC+RVFASGQALGGHKR H           RV  N + +    +DLNL PAP
Sbjct: 238 AKRIHECPICLRVFASGQALGGHKRSHGVGNLSVNQQRRVHRNESVKQ-RMIDLNL-PAP 284

[Close]

BLAST of MS022233.1 vs. TAIR 10
Match: AT2G45120.1 (C2H2-like zinc finger protein )

HSP 1 Score: 86.7 bits (213), Expect = 3.8e-17
Identity = 65/189 (34.39%), Postives = 89/189 (47.09%), Query Frame = 0


Query: 145 AAITEEEQDIADCLIMLA---------NSPNIAIDKI----PELDGVGTTCRFECSSCKK 204
           A+ T  E+D+A CLIML+             +  D+      +     +  RF+C +C K
Sbjct: 142 ASDTTTEEDLAFCLIMLSRDKWKQQKKKKQRVEEDETDHDSEDYKSSKSRGRFKCETCGK 201

Query: 205 VFGSHQALGGHRASHKNVKGCFAIARGDEETEEHQFQSAALYGHERNSNLEDRMSMFFGI 264
           VF S+QALGGHRASHK  K C         T+  Q ++  + G +               
Sbjct: 202 VFKSYQALGGHRASHKKNKACM--------TKTEQVETEYVLGVKEKK------------ 261

Query: 265 GHKCSICMRVFASGQALGGHKRCHWE--------------RVEENTATEGCANLDLNLPP 307
            H+C IC RVF SGQALGGHKR H                ++EE  + +    +DLNL P
Sbjct: 262 VHECPICFRVFTSGQALGGHKRSHGSNIGAGRGLSVSQIVQIEEEVSVKQ-RMIDLNL-P 308

The following BLAST results are available for this feature:

BLAST of MS022233.1 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6572169.1	5.7e-100	65.53	Zinc finger protein ZAT3, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_023554558.1	2.2e-99	65.22	zinc finger protein ZAT3-like [Cucurbita pepo subsp. pepo]	[more]
XP_022969191.1	8.3e-99	64.91	zinc finger protein ZAT3-like [Cucurbita maxima]	[more]
XP_022953009.1	7.0e-98	64.60	zinc finger protein ZAT3-like [Cucurbita moschata]	[more]
KAG7011807.1	1.2e-97	65.70	Zinc finger protein ZAT3, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]

BLAST of MS022233.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O65499	1.8e-64	50.36	Zinc finger protein ZAT3 OS=Arabidopsis thaliana OX=3702 GN=ZAT3 PE=1 SV=1	[more]
Q9SIJ0	9.6e-58	44.75	Zinc finger protein ZAT2 OS=Arabidopsis thaliana OX=3702 GN=ZAT2 PE=1 SV=1	[more]
Q9M202	4.1e-16	35.29	Zinc finger protein ZAT9 OS=Arabidopsis thaliana OX=3702 GN=ZAT9 PE=2 SV=1	[more]
Q9SHD0	5.4e-16	34.39	Zinc finger protein ZAT4 OS=Arabidopsis thaliana OX=3702 GN=ZAT4 PE=2 SV=1	[more]
Q96289	2.0e-15	34.88	Zinc finger protein ZAT10 OS=Arabidopsis thaliana OX=3702 GN=ZAT10 PE=2 SV=1	[more]

BLAST of MS022233.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HX25	4.0e-99	64.91	zinc finger protein ZAT3-like OS=Cucurbita maxima OX=3661 GN=LOC111468261 PE=4 S...	[more]
A0A6J1GNF2	3.4e-98	64.60	zinc finger protein ZAT3-like OS=Cucurbita moschata OX=3662 GN=LOC111455526 PE=4...	[more]
A0A7N2N084	4.2e-80	56.65	Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1	[more]
A0A2N9I964	5.5e-80	56.48	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS48273 PE=4 SV=1	[more]
A0A7J7H281	2.1e-79	54.44	Uncharacterized protein OS=Camellia sinensis OX=4442 GN=HYC85_017298 PE=4 SV=1	[more]

BLAST of MS022233.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G35280.1	1.3e-65	50.36	C2H2-like zinc finger protein	[more]
AT2G17180.1	6.8e-59	44.75	C2H2-like zinc finger protein	[more]
AT1G02040.1	1.7e-25	40.34	C2H2-type zinc finger family protein	[more]
AT3G60580.1	2.9e-17	35.29	C2H2-like zinc finger protein	[more]
AT2G45120.1	3.8e-17	34.39	C2H2-like zinc finger protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013087	Zinc finger C2H2-type	SMART	SM00355	c2h2final6	coord: 90..112 e-value: 0.25 score: 20.4 coord: 184..206 e-value: 0.47 score: 19.5 coord: 253..275 e-value: 0.82 score: 18.7
IPR013087	Zinc finger C2H2-type	PROSITE	PS00028	ZINC_FINGER_C2H2_1	coord: 255..275
IPR013087	Zinc finger C2H2-type	PROSITE	PS00028	ZINC_FINGER_C2H2_1	coord: 92..112
IPR013087	Zinc finger C2H2-type	PROSITE	PS00028	ZINC_FINGER_C2H2_1	coord: 186..206
IPR013087	Zinc finger C2H2-type	PROSITE	PS50157	ZINC_FINGER_C2H2_2	coord: 184..211 score: 10.242228
IPR013087	Zinc finger C2H2-type	PROSITE	PS50157	ZINC_FINGER_C2H2_2	coord: 253..275 score: 9.078375
IPR013087	Zinc finger C2H2-type	PROSITE	PS50157	ZINC_FINGER_C2H2_2	coord: 90..117 score: 9.681084
None	No IPR available	GENE3D	3.30.160.60	Classic Zinc Finger	coord: 181..275 e-value: 1.3E-6 score: 30.6
None	No IPR available	PFAM	PF13912	zf-C2H2_6	coord: 92..114 e-value: 4.0E-6 score: 26.7 coord: 253..277 e-value: 1.0E-10 score: 41.3 coord: 183..207 e-value: 7.9E-10 score: 38.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 38..91
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 299..320
None	No IPR available	PANTHER	PTHR47591:SF1	ZINC FINGER PROTEIN ZAT2-RELATED	coord: 31..320
None	No IPR available	PANTHER	PTHR47591	ZINC FINGER PROTEIN ZAT2-RELATED	coord: 31..320
IPR036236	Zinc finger C2H2 superfamily	SUPERFAMILY	57667	beta-beta-alpha zinc fingers	coord: 91..206

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
MS022233	MS022233	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MS022233.1-cds	MS022233.1-cds-scaffold47:1888886..1889845	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
MS022233.1	MS022233.1-protein	polypeptide