MS022233.1 (mRNA) Bitter gourd (TR) v1

InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
Position :
0
Zoom :
x 1
ATGAATGCTGCAGATATTCACTCCGCCGCCATTGCCAGTAGCACTACTTCACTCGACCTCGCTTTTCCGTTTCAACTACGAATGGCGGAACTCACTTCCGTGTTTCCTTCTTCTCCTTCGACTTTCGACACCATCACGGCCTCCAAGCGCCGCCATAATCCGCGGAAGAAGCGGTCCGGAATCGACAACGGCGGAGTTACCGGCAGCGGCGTTTCGAAGCCTAAGTATAGCAAGAAGCCGCCCGATCCTCGGTCGCCGAAGATCACTCCTCCCTGCACCGAATGCGGAAAGAAGTTTTGGTCGGATAAAGCGCTTTTCGGACACATGAGGTGCCATCCGGAACGTCAATGGCGGGGTATTAATCCGCCGATTAATTTCGTCCGTCGCCCGATTTCGGTTTCTCCTCGTCGTAGCCCTACCGCCGGTTTGGAAGCTGCAATCACCGAAGAGGAACAGGACATCGCCGATTGCTTGATAATGCTGGCCAATAGCCCTAATATTGCGATCGATAAAATCCCCGAATTAGACGGCGTTGGTACGACATGTCGTTTCGAATGCTCGAGTTGCAAGAAAGTGTTCGGGTCGCACCAGGCGCTTGGGGGGCACAGGGCAAGCCACAAGAACGTGAAAGGTTGTTTCGCCATCGCAAGGGGCGATGAAGAAACAGAGGAACATCAGTTTCAGAGCGCTGCTCTGTATGGCCATGAGAGGAATTCCAATCTGGAGGATAGAATGTCGATGTTTTTTGGGATAGGGCACAAGTGCAGTATATGTATGAGGGTTTTTGCCAGTGGTCAAGCTCTTGGTGGGCACAAGAGGTGCCATTGGGAGAGAGTGGAGGAGAATACAGCAACAGAGGGTTGTGCTAATTTGGACTTGAATTTGCCTCCTGCCCCTGTTGAAGATGACTCCTCTTCTTCCTATTCTTCAGGCCTCACTCTGGATCTCAGGTTGGGCCTT100200300400500600700800900Score = Score = Score = Score = 10.242228Score = 9.078375Score = 9.681084Expect = 1.3E-6 / Score = 30.6Score = Score = Score = Score = Score = SequenceSM00355PS00028PS00028PS00028PS50157PS50157PS50157G3DSA:3.30.160.60PF13912mobidb-litemobidb-litePTHR47591:SF1PTHR47591SSF57667
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013087Zinc finger C2H2-typeSMARTSM00355c2h2final6coord: 90..112
e-value: 0.25
score: 20.4
coord: 184..206
e-value: 0.47
score: 19.5
coord: 253..275
e-value: 0.82
score: 18.7
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 255..275
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 92..112
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 186..206
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 184..211
score: 10.242228
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 253..275
score: 9.078375
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 90..117
score: 9.681084
NoneNo IPR availableGENE3D3.30.160.60Classic Zinc Fingercoord: 181..275
e-value: 1.3E-6
score: 30.6
NoneNo IPR availablePFAMPF13912zf-C2H2_6coord: 92..114
e-value: 4.0E-6
score: 26.7
coord: 253..277
e-value: 1.0E-10
score: 41.3
coord: 183..207
e-value: 7.9E-10
score: 38.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 38..91
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 299..320
NoneNo IPR availablePANTHERPTHR47591:SF1ZINC FINGER PROTEIN ZAT2-RELATEDcoord: 31..320
NoneNo IPR availablePANTHERPTHR47591ZINC FINGER PROTEIN ZAT2-RELATEDcoord: 31..320
IPR036236Zinc finger C2H2 superfamilySUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 91..206