Lsi11G006200.1 (mRNA) Bottle gourd (USVL1VR-Ls) v1

InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
Position :
0
Zoom :
x 1
ATGAAGAATCACAGGATTGTTCCTGACGAATACACTTTTGCGCCGTTGCTTAAATCATGTGCGAATCTCTGTGAGTACAGGCTTGGTCAGTGTGTGATTTCTGAAGTTTTACGTCGTGGGTTTTACTGTTTTGGGTCTATTCGTATTGGGGTGGTTGAGTTGTATGTCTGTTGTGAGAGGATGGAGGATGCCCGGAAGGTGTTTGATGAAATGCCTCATAGGGATGTGGTTGTTTGGAACTTGATGATTCGTGGGTTTTGCAAGATGGGCAATGTTGATTTTGGGTTGTGTCTCTTTAGGCAAATGAATGAACGTAGCCTGGTTTCTTGGAACACTATGATTTCCTGTTTAGCTCAAAATAGACGTGATGTCGAAGCTTTGGAACTCTTTCAACAGATGGAAGAATATGGTTTTGAACCAGATGAGGTTACTGTGGTCACTATGTTGCCTGTATGTTCTCGTTTGGGAGCTCTTGATGTTGGACAAAGGATCCATTCTTATGCAAGTTCTAAGGGAGATTTGGCAGATATTACAACGATTGGGAATTCGCTAGTCGATTTTTACTGTAAATGTGGGAATACAGAAAGGGCTTACAACATTTTTCAGAAAATAACATGCAAAAGTGTTGTCTCTTGGAATACACTGATTTTGGGCTTTGCTTTAAATGGGAAGGGGGAGGTCGCTATTGACCTTTTTATGGAGATGGGAAAAGAGGATGTGAAGCCTAACGATGCAACATTTGTAGCTGTCTTGACCGCTTGCGTCCATTCGGGATTGTTAGAGAAGGGTCGAGATATATTTTCTTCAATGGCTGAGAAGTATGGAATCCAGCCAAAACTCGAACATTTTGGTTGTATGGTCGATCTTTTGGGACGTGGTGGATGTGTGGAGGAGGCTCATAACTTGATTAAAAGCATGCCAGTGCAGCCAAATGCCACTTTATGGGGTGCTTTGCTTGGTGCTTGCCGAACTCATGGTAACTTGAAACTTGCAGAAATGGCAGTGAAAGAGCTCATCACTCTTGAACCATGGAACTCTGGTAATTATGTATTGTTGTCAAATATGTTCGCTGAAGAAGGAAGATGGGAAGATGTTGAGAATGTCAGACGTTGGATGAGAGGAAAGAGCGTCAAGAAAGCACCTGGGCAAAGTGCAAGTGGGTAA10020030040050060070080090010001100Expect = 1.8E-10 / Score = 40.9Expect = 2.9E-12 / Score = 46.6Expect = 9.2E-7 / Score = 26.7Expect = 8.2E-11 / Score = 39.4Expect = 5.8E-6 / Score = 24.2Expect = 0.0016 / Score = 16.5Expect = 1.3E-6 / Score = 28.3Score = 12.539784Score = 10.764054Score = 10.742131Score = 8.53891Expect = 1.6E-31 / Score = 111.8Expect = 1.1E-40 / Score = 141.9Score = Score = SequencePF13041TIGR00756PF01535PS51375PS51375PS51375PS51375G3DSA:1.25.40.10G3DSA:1.25.40.10PTHR47928:SF148PTHR47928
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 207..255
e-value: 2.9E-12
score: 46.6
coord: 107..152
e-value: 1.8E-10
score: 40.9
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 210..243
e-value: 5.8E-6
score: 24.2
coord: 108..142
e-value: 8.2E-11
score: 39.4
coord: 246..278
e-value: 0.0016
score: 16.5
coord: 77..107
e-value: 9.2E-7
score: 26.7
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 54..75
e-value: 0.17
score: 12.2
coord: 283..306
e-value: 0.11
score: 12.8
coord: 182..206
e-value: 0.0078
score: 16.4
coord: 77..105
e-value: 1.3E-6
score: 28.3
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 106..140
score: 12.539784
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 75..105
score: 10.764054
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 208..242
score: 10.742131
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 243..278
score: 8.53891
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 1..179
e-value: 1.6E-31
score: 111.8
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 180..387
e-value: 1.1E-40
score: 141.9
NoneNo IPR availablePANTHERPTHR47928:SF148OS11G0673000 PROTEINcoord: 1..385
NoneNo IPR availablePANTHERPTHR47928REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATEDcoord: 1..385