Homology
BLAST of Lsi11G006200 vs. ExPASy Swiss-Prot
Match:
O80488 (Pentatricopeptide repeat-containing protein At1g09190 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E70 PE=2 SV=1)
HSP 1 Score: 457.6 bits (1176), Expect = 1.4e-127
Identity = 220/385 (57.14%), Postives = 288/385 (74.81%), Query Frame = 0
Query: 1 MKNHRIVPDEYTFAPLLKSCANLCEYRLGQCVISEVLRRGFYCFGSIRIGVVELYVCCER 60
MK+ I DEYT+APLLKSC++L + R G+CV E++R GF+ G IRIGVVELY R
Sbjct: 93 MKSRGIWADEYTYAPLLKSCSSLSDLRFGKCVHGELIRTGFHRLGKIRIGVVELYTSGGR 152
Query: 61 MEDARKVFDEMPHRDVVVWNLMIRGFCKMGNVDFGLCLFRQMNERSLVSWNTMISCLAQN 120
M DA+KVFDEM R+VVVWNLMIRGFC G+V+ GL LF+QM+ERS+VSWN+MIS L++
Sbjct: 153 MGDAQKVFDEMSERNVVVWNLMIRGFCDSGDVERGLHLFKQMSERSIVSWNSMISSLSKC 212
Query: 121 RRDVEALELFQQMEEYGFEPDEVTVVTMLPVCSRLGALDVGQRIHSYASSKGDLADITTI 180
RD EALELF +M + GF+PDE TVVT+LP+ + LG LD G+ IHS A S G D T+
Sbjct: 213 GRDREALELFCEMIDQGFDPDEATVVTVLPISASLGVLDTGKWIHSTAESSGLFKDFITV 272
Query: 181 GNSLVDFYCKCGNTERAYNIFQKITCKSVVSWNTLILGFALNGKGEVAIDLFMEMGKE-D 240
GN+LVDFYCK G+ E A IF+K+ ++VVSWNTLI G A+NGKGE IDLF M +E
Sbjct: 273 GNALVDFYCKSGDLEAATAIFRKMQRRNVVSWNTLISGSAVNGKGEFGIDLFDAMIEEGK 332
Query: 241 VKPNDATFVAVLTACVHSGLLEKGRDIFSSMAEKYGIQPKLEHFGCMVDLLGRGGCVEEA 300
V PN+ATF+ VL C ++G +E+G ++F M E++ ++ + EH+G MVDL+ R G + EA
Sbjct: 333 VAPNEATFLGVLACCSYTGQVERGEELFGLMMERFKLEARTEHYGAMVDLMSRSGRITEA 392
Query: 301 HNLIKSMPVQPNATLWGALLGACRTHGNLKLAEMAVKELITLEPWNSGNYVLLSNMFAEE 360
+K+MPV NA +WG+LL ACR+HG++KLAE+A EL+ +EP NSGNYVLLSN++AEE
Sbjct: 393 FKFLKNMPVNANAAMWGSLLSACRSHGDVKLAEVAAMELVKIEPGNSGNYVLLSNLYAEE 452
Query: 361 GRWEDVENVRRWMRGKSVKKAPGQS 385
GRW+DVE VR M+ ++K+ GQS
Sbjct: 453 GRWQDVEKVRTLMKKNRLRKSTGQS 477
BLAST of Lsi11G006200 vs. ExPASy Swiss-Prot
Match:
Q9FFG8 (Pentatricopeptide repeat-containing protein At5g44230 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H17 PE=2 SV=1)
HSP 1 Score: 340.1 bits (871), Expect = 3.2e-92
Identity = 162/386 (41.97%), Postives = 243/386 (62.95%), Query Frame = 0
Query: 1 MKNHRIVPDEYTFAPLLKSCANLCEYRLGQCVISEVLRRGFYCFGSIRIGVVELYVCCER 60
M+ I P +TF+ LLK+C + + LG+ ++ R +CF + ++++YV CE
Sbjct: 140 MRKEEITPVSFTFSALLKACGTMKDLNLGRQFHAQTFRLRGFCFVYVGNTMIDMYVKCES 199
Query: 61 MEDARKVFDEMPHRDVVVWNLMIRGFCKMGNVDFGLCLFRQMNERSLVSWNTMISCLAQN 120
++ ARKVFDEMP RDV+ W +I + ++GN++ LF + + +V+W M++ AQN
Sbjct: 200 IDCARKVFDEMPERDVISWTELIAAYARVGNMECAAELFESLPTKDMVAWTAMVTGFAQN 259
Query: 121 RRDVEALELFQQMEEYGFEPDEVTVVTMLPVCSRLGALDVGQRIHSYASSKG-DLADITT 180
+ EALE F +ME+ G DEVTV + C++LGA R A G +D
Sbjct: 260 AKPQEALEYFDRMEKSGIRADEVTVAGYISACAQLGASKYADRAVQIAQKSGYSPSDHVV 319
Query: 181 IGNSLVDFYCKCGNTERAYNIFQKITCKSVVSWNTLILGFALNGKGEVAIDLFMEM-GKE 240
IG++L+D Y KCGN E A N+F + K+V +++++ILG A +G+ + A+ LF M +
Sbjct: 320 IGSALIDMYSKCGNVEEAVNVFMSMNNKNVFTYSSMILGLATHGRAQEALHLFHYMVTQT 379
Query: 241 DVKPNDATFVAVLTACVHSGLLEKGRDIFSSMAEKYGIQPKLEHFGCMVDLLGRGGCVEE 300
++KPN TFV L AC HSGL+++GR +F SM + +G+QP +H+ CMVDLLGR G ++E
Sbjct: 380 EIKPNTVTFVGALMACSHSGLVDQGRQVFDSMYQTFGVQPTRDHYTCMVDLLGRTGRLQE 439
Query: 301 AHNLIKSMPVQPNATLWGALLGACRTHGNLKLAEMAVKELITLEPWNSGNYVLLSNMFAE 360
A LIK+M V+P+ +WGALLGACR H N ++AE+A + L LEP GNY+LLSN++A
Sbjct: 440 ALELIKTMSVEPHGGVWGALLGACRIHNNPEIAEIAAEHLFELEPDIIGNYILLSNVYAS 499
Query: 361 EGRWEDVENVRRWMRGKSVKKAPGQS 385
G W V VR+ ++ K +KK P S
Sbjct: 500 AGDWGGVLRVRKLIKEKGLKKTPAVS 525
BLAST of Lsi11G006200 vs. ExPASy Swiss-Prot
Match:
Q9FMA1 (Pentatricopeptide repeat-containing protein At5g56310 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E13 PE=2 SV=1)
HSP 1 Score: 332.0 bits (850), Expect = 8.8e-90
Identity = 160/380 (42.11%), Postives = 246/380 (64.74%), Query Frame = 0
Query: 8 PDEYTFAPLLKSCANLCEYRLGQCVISEVLRRGFYCFGSIRIGVVELYVCCERMEDARKV 67
PD +TF +LK + + G+ + +V+ GF + G++++Y C + DARK+
Sbjct: 114 PDTFTFPFVLKIAVRVSDVWFGRQIHGQVVVFGFDSSVHVVTGLIQMYFSCGGLGDARKM 173
Query: 68 FDEMPHRDVVVWNLMIRGFCKMGNVDFGLCLFRQMN--ERSLVSWNTMISCLAQNRRDVE 127
FDEM +DV VWN ++ G+ K+G +D L M R+ VSW +IS A++ R E
Sbjct: 174 FDEMLVKDVNVWNALLAGYGKVGEMDEARSLLEMMPCWVRNEVSWTCVISGYAKSGRASE 233
Query: 128 ALELFQQMEEYGFEPDEVTVVTMLPVCSRLGALDVGQRIHSYASSKGDLADITTIGNSLV 187
A+E+FQ+M EPDEVT++ +L C+ LG+L++G+RI SY +G + ++ N+++
Sbjct: 234 AIEVFQRMLMENVEPDEVTLLAVLSACADLGSLELGERICSYVDHRG-MNRAVSLNNAVI 293
Query: 188 DFYCKCGNTERAYNIFQKITCKSVVSWNTLILGFALNGKGEVAIDLFMEMGKEDVKPNDA 247
D Y K GN +A ++F+ + ++VV+W T+I G A +G G A+ +F M K V+PND
Sbjct: 294 DMYAKSGNITKALDVFECVNERNVVTWTTIIAGLATHGHGAEALAMFNRMVKAGVRPNDV 353
Query: 248 TFVAVLTACVHSGLLEKGRDIFSSMAEKYGIQPKLEHFGCMVDLLGRGGCVEEAHNLIKS 307
TF+A+L+AC H G ++ G+ +F+SM KYGI P +EH+GCM+DLLGR G + EA +IKS
Sbjct: 354 TFIAILSACSHVGWVDLGKRLFNSMRSKYGIHPNIEHYGCMIDLLGRAGKLREADEVIKS 413
Query: 308 MPVQPNATLWGALLGACRTHGNLKLAEMAVKELITLEPWNSGNYVLLSNMFAEEGRWEDV 367
MP + NA +WG+LL A H +L+L E A+ ELI LEP NSGNY+LL+N+++ GRW++
Sbjct: 414 MPFKANAAIWGSLLAASNVHHDLELGERALSELIKLEPNNSGNYMLLANLYSNLGRWDES 473
Query: 368 ENVRRWMRGKSVKKAPGQSA 386
+R M+G VKK G+S+
Sbjct: 474 RMMRNMMKGIGVKKMAGESS 492
BLAST of Lsi11G006200 vs. ExPASy Swiss-Prot
Match:
Q9SIL5 (Pentatricopeptide repeat-containing protein At2g20540 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E78 PE=2 SV=1)
HSP 1 Score: 328.6 bits (841), Expect = 9.8e-89
Identity = 152/378 (40.21%), Postives = 249/378 (65.87%), Query Frame = 0
Query: 7 VPDEYTFAPLLKSCANLCEYRLGQCVISEVLRRGFYCFGSIRIGVVELYVCCERMEDARK 66
+PD +TF + KSCA+L LG+ V + + G ++++Y+ + + DA K
Sbjct: 106 LPDRFTFPFMFKSCASLGSCYLGKQVHGHLCKFGPRFHVVTENALIDMYMKFDDLVDAHK 165
Query: 67 VFDEMPHRDVVVWNLMIRGFCKMGNVDFGLCLFRQMNERSLVSWNTMISCLAQNRRDVEA 126
VFDEM RDV+ WN ++ G+ ++G + LF M ++++VSW MIS VEA
Sbjct: 166 VFDEMYERDVISWNSLLSGYARLGQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEA 225
Query: 127 LELFQQMEEYGFEPDEVTVVTMLPVCSRLGALDVGQRIHSYASSKGDLADITTIGNSLVD 186
++ F++M+ G EPDE++++++LP C++LG+L++G+ IH YA +G L T + N+L++
Sbjct: 226 MDFFREMQLAGIEPDEISLISVLPSCAQLGSLELGKWIHLYAERRGFLKQ-TGVCNALIE 285
Query: 187 FYCKCGNTERAYNIFQKITCKSVVSWNTLILGFALNGKGEVAIDLFMEMGKEDVKPNDAT 246
Y KCG +A +F ++ K V+SW+T+I G+A +G AI+ F EM + VKPN T
Sbjct: 286 MYSKCGVISQAIQLFGQMEGKDVISWSTMISGYAYHGNAHGAIETFNEMQRAKVKPNGIT 345
Query: 247 FVAVLTACVHSGLLEKGRDIFSSMAEKYGIQPKLEHFGCMVDLLGRGGCVEEAHNLIKSM 306
F+ +L+AC H G+ ++G F M + Y I+PK+EH+GC++D+L R G +E A + K+M
Sbjct: 346 FLGLLSACSHVGMWQEGLRYFDMMRQDYQIEPKIEHYGCLIDVLARAGKLERAVEITKTM 405
Query: 307 PVQPNATLWGALLGACRTHGNLKLAEMAVKELITLEPWNSGNYVLLSNMFAEEGRWEDVE 366
P++P++ +WG+LL +CRT GNL +A +A+ L+ LEP + GNYVLL+N++A+ G+WEDV
Sbjct: 406 PMKPDSKIWGSLLSSCRTPGNLDVALVAMDHLVELEPEDMGNYVLLANIYADLGKWEDVS 465
Query: 367 NVRRWMRGKSVKKAPGQS 385
+R+ +R +++KK PG S
Sbjct: 466 RLRKMIRNENMKKTPGGS 482
BLAST of Lsi11G006200 vs. ExPASy Swiss-Prot
Match:
Q9SY02 (Pentatricopeptide repeat-containing protein At4g02750 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H24 PE=3 SV=1)
HSP 1 Score: 322.8 bits (826), Expect = 5.4e-87
Identity = 156/330 (47.27%), Postives = 219/330 (66.36%), Query Frame = 0
Query: 55 YVCCERMEDARKVFDEMPHRDVVVWNLMIRGFCKMGNVDFGLCLFRQMNERSLVSWNTMI 114
YV ERME A+++FD MP R+V WN MI G+ + G + LF +M +R VSW MI
Sbjct: 322 YVQGERMEMAKELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMI 381
Query: 115 SCLAQNRRDVEALELFQQMEEYGFEPDEVTVVTMLPVCSRLGALDVGQRIHSYASSKGDL 174
+ +Q+ EAL LF QME G + + + L C+ + AL++G+++H KG
Sbjct: 382 AGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHG-RLVKGGY 441
Query: 175 ADITTIGNSLVDFYCKCGNTERAYNIFQKITCKSVVSWNTLILGFALNGKGEVAIDLFME 234
+GN+L+ YCKCG+ E A ++F+++ K +VSWNT+I G++ +G GEVA+ F
Sbjct: 442 ETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFES 501
Query: 235 MGKEDVKPNDATFVAVLTACVHSGLLEKGRDIFSSMAEKYGIQPKLEHFGCMVDLLGRGG 294
M +E +KP+DAT VAVL+AC H+GL++KGR F +M + YG+ P +H+ CMVDLLGR G
Sbjct: 502 MKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAG 561
Query: 295 CVEEAHNLIKSMPVQPNATLWGALLGACRTHGNLKLAEMAVKELITLEPWNSGNYVLLSN 354
+E+AHNL+K+MP +P+A +WG LLGA R HGN +LAE A ++ +EP NSG YVLLSN
Sbjct: 562 LLEDAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSN 621
Query: 355 MFAEEGRWEDVENVRRWMRGKSVKKAPGQS 385
++A GRW DV +R MR K VKK PG S
Sbjct: 622 LYASSGRWGDVGKLRVRMRDKGVKKVPGYS 650
BLAST of Lsi11G006200 vs. ExPASy TrEMBL
Match:
A0A5A7U1F2 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold546G001240 PE=4 SV=1)
HSP 1 Score: 742.7 bits (1916), Expect = 8.0e-211
Identity = 351/387 (90.70%), Postives = 369/387 (95.35%), Query Frame = 0
Query: 1 MKNHRIVPDEYTFAPLLKSCANLCEYRLGQCVISEVLRRGFYCFGSIRIGVVELYVCCER 60
MKNHRIVPD+YTFAPLLKSCANLCEY LGQCVISEVL RGFYCFGSIRIGVVELYVCCE+
Sbjct: 98 MKNHRIVPDQYTFAPLLKSCANLCEYSLGQCVISEVLHRGFYCFGSIRIGVVELYVCCEK 157
Query: 61 MEDARKVFDEMPHRDVVVWNLMIRGFCKMGNVDFGLCLFRQMNERSLVSWNTMISCLAQN 120
MEDA K FDEM HRDVVVWNLMIRGFCKMGNVDFGLCLFRQM+ERSLVSWNT+ISCLAQN
Sbjct: 158 MEDAWKAFDEMSHRDVVVWNLMIRGFCKMGNVDFGLCLFRQMSERSLVSWNTIISCLAQN 217
Query: 121 RRDVEALELFQQMEEYGFEPDEVTVVTMLPVCSRLGALDVGQRIHSYASSKGDLADITTI 180
RRDVEALELFQQMEE+GF+PDEVTVVTMLPVCSRLGAL+VGQRIHSY SSKG+L T +
Sbjct: 218 RRDVEALELFQQMEEHGFKPDEVTVVTMLPVCSRLGALEVGQRIHSYTSSKGNLVGTTMV 277
Query: 181 GNSLVDFYCKCGNTERAYNIFQKITCKSVVSWNTLILGFALNGKGEVAIDLFMEMGKEDV 240
GNSL+DFYCKCGN E AYNIFQK+TCKSVVSWNT+ILGFALNGKGE AIDLFMEM KEDV
Sbjct: 278 GNSLIDFYCKCGNIESAYNIFQKMTCKSVVSWNTIILGFALNGKGEFAIDLFMEMRKEDV 337
Query: 241 KPNDATFVAVLTACVHSGLLEKGRDIFSSMAEKYGIQPKLEHFGCMVDLLGRGGCVEEAH 300
KPNDATFVAVLTACVHSGLLEKGR++FSSMAE Y IQPKLEHFGCMVDLLGRGGCVEEAH
Sbjct: 338 KPNDATFVAVLTACVHSGLLEKGRELFSSMAEDYEIQPKLEHFGCMVDLLGRGGCVEEAH 397
Query: 301 NLIKSMPVQPNATLWGALLGACRTHGNLKLAEMAVKELITLEPWNSGNYVLLSNMFAEEG 360
NLIKSMP+QPNATLWGALLGACRTHGNLKLAEMAVKELI+LEPWNSGNYVLLSNM AEEG
Sbjct: 398 NLIKSMPMQPNATLWGALLGACRTHGNLKLAEMAVKELISLEPWNSGNYVLLSNMLAEEG 457
Query: 361 RWEDVENVRRWMRGKSVKKAPGQSASG 388
RWE+VENVR+WMR KSVKKAPGQSASG
Sbjct: 458 RWEEVENVRQWMREKSVKKAPGQSASG 484
BLAST of Lsi11G006200 vs. ExPASy TrEMBL
Match:
A0A1S3BXN7 (pentatricopeptide repeat-containing protein At1g09190 OS=Cucumis melo OX=3656 GN=LOC103494345 PE=4 SV=1)
HSP 1 Score: 742.7 bits (1916), Expect = 8.0e-211
Identity = 351/387 (90.70%), Postives = 369/387 (95.35%), Query Frame = 0
Query: 1 MKNHRIVPDEYTFAPLLKSCANLCEYRLGQCVISEVLRRGFYCFGSIRIGVVELYVCCER 60
MKNHRIVPD+YTFAPLLKSCANLCEY LGQCVISEVL RGFYCFGSIRIGVVELYVCCE+
Sbjct: 98 MKNHRIVPDQYTFAPLLKSCANLCEYSLGQCVISEVLHRGFYCFGSIRIGVVELYVCCEK 157
Query: 61 MEDARKVFDEMPHRDVVVWNLMIRGFCKMGNVDFGLCLFRQMNERSLVSWNTMISCLAQN 120
MEDA K FDEM HRDVVVWNLMIRGFCKMGNVDFGLCLFRQM+ERSLVSWNT+ISCLAQN
Sbjct: 158 MEDAWKAFDEMSHRDVVVWNLMIRGFCKMGNVDFGLCLFRQMSERSLVSWNTIISCLAQN 217
Query: 121 RRDVEALELFQQMEEYGFEPDEVTVVTMLPVCSRLGALDVGQRIHSYASSKGDLADITTI 180
RRDVEALELFQQMEE+GF+PDEVTVVTMLPVCSRLGAL+VGQRIHSY SSKG+L T +
Sbjct: 218 RRDVEALELFQQMEEHGFKPDEVTVVTMLPVCSRLGALEVGQRIHSYTSSKGNLVGTTMV 277
Query: 181 GNSLVDFYCKCGNTERAYNIFQKITCKSVVSWNTLILGFALNGKGEVAIDLFMEMGKEDV 240
GNSL+DFYCKCGN E AYNIFQK+TCKSVVSWNT+ILGFALNGKGE AIDLFMEM KEDV
Sbjct: 278 GNSLIDFYCKCGNIESAYNIFQKMTCKSVVSWNTIILGFALNGKGEFAIDLFMEMRKEDV 337
Query: 241 KPNDATFVAVLTACVHSGLLEKGRDIFSSMAEKYGIQPKLEHFGCMVDLLGRGGCVEEAH 300
KPNDATFVAVLTACVHSGLLEKGR++FSSMAE Y IQPKLEHFGCMVDLLGRGGCVEEAH
Sbjct: 338 KPNDATFVAVLTACVHSGLLEKGRELFSSMAEDYEIQPKLEHFGCMVDLLGRGGCVEEAH 397
Query: 301 NLIKSMPVQPNATLWGALLGACRTHGNLKLAEMAVKELITLEPWNSGNYVLLSNMFAEEG 360
NLIKSMP+QPNATLWGALLGACRTHGNLKLAEMAVKELI+LEPWNSGNYVLLSNM AEEG
Sbjct: 398 NLIKSMPMQPNATLWGALLGACRTHGNLKLAEMAVKELISLEPWNSGNYVLLSNMLAEEG 457
Query: 361 RWEDVENVRRWMRGKSVKKAPGQSASG 388
RWE+VENVR+WMR KSVKKAPGQSASG
Sbjct: 458 RWEEVENVRQWMREKSVKKAPGQSASG 484
BLAST of Lsi11G006200 vs. ExPASy TrEMBL
Match:
A0A0A0LJW6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G033910 PE=4 SV=1)
HSP 1 Score: 740.0 bits (1909), Expect = 5.2e-210
Identity = 349/387 (90.18%), Postives = 371/387 (95.87%), Query Frame = 0
Query: 1 MKNHRIVPDEYTFAPLLKSCANLCEYRLGQCVISEVLRRGFYCFGSIRIGVVELYVCCER 60
MKNHRIVPD+YTFAPLLKSCANLCEY LGQCVISEV RRGFYCFGSIRIGVVELYVCCE+
Sbjct: 98 MKNHRIVPDQYTFAPLLKSCANLCEYSLGQCVISEVFRRGFYCFGSIRIGVVELYVCCEK 157
Query: 61 MEDARKVFDEMPHRDVVVWNLMIRGFCKMGNVDFGLCLFRQMNERSLVSWNTMISCLAQN 120
MEDA K+FDEM HRDVVVWNLMIRGFCK GNVDFGLCLFRQM+ERSLVSWNT+ISCLAQN
Sbjct: 158 MEDAWKMFDEMSHRDVVVWNLMIRGFCKTGNVDFGLCLFRQMSERSLVSWNTIISCLAQN 217
Query: 121 RRDVEALELFQQMEEYGFEPDEVTVVTMLPVCSRLGALDVGQRIHSYASSKGDLADITTI 180
RRDVEALELFQQMEE+GF+PDEVTVVTMLPVCSRLGAL+VGQRIHSYASSKG+L ITT+
Sbjct: 218 RRDVEALELFQQMEEHGFKPDEVTVVTMLPVCSRLGALEVGQRIHSYASSKGNLVGITTV 277
Query: 181 GNSLVDFYCKCGNTERAYNIFQKITCKSVVSWNTLILGFALNGKGEVAIDLFMEMGKEDV 240
GNSL+DFYCKCGN E+AYNIFQK+TCKSVVSWNT+ILGFALNGKGE AIDLFMEM KE +
Sbjct: 278 GNSLIDFYCKCGNIEKAYNIFQKMTCKSVVSWNTIILGFALNGKGEFAIDLFMEMRKEYL 337
Query: 241 KPNDATFVAVLTACVHSGLLEKGRDIFSSMAEKYGIQPKLEHFGCMVDLLGRGGCVEEAH 300
KPNDATFVAVLTACVHSGLLEKGR++FSSMAE Y IQPKLEHFGCMVDLLGRGGCVEEAH
Sbjct: 338 KPNDATFVAVLTACVHSGLLEKGRELFSSMAEDYEIQPKLEHFGCMVDLLGRGGCVEEAH 397
Query: 301 NLIKSMPVQPNATLWGALLGACRTHGNLKLAEMAVKELITLEPWNSGNYVLLSNMFAEEG 360
LIKSMP+QPNATLWGA+LGACRTHGNLKLAEMAVKELI+LEPWNSGNYVLLSNM AEEG
Sbjct: 398 KLIKSMPMQPNATLWGAVLGACRTHGNLKLAEMAVKELISLEPWNSGNYVLLSNMLAEEG 457
Query: 361 RWEDVENVRRWMRGKSVKKAPGQSASG 388
RWE+VENVR+WMR KSVKKAPGQSASG
Sbjct: 458 RWEEVENVRQWMREKSVKKAPGQSASG 484
BLAST of Lsi11G006200 vs. ExPASy TrEMBL
Match:
A0A6J1HMD5 (pentatricopeptide repeat-containing protein At1g09190 OS=Cucurbita maxima OX=3661 GN=LOC111465519 PE=4 SV=1)
HSP 1 Score: 701.4 bits (1809), Expect = 2.0e-198
Identity = 332/387 (85.79%), Postives = 361/387 (93.28%), Query Frame = 0
Query: 1 MKNHRIVPDEYTFAPLLKSCANLCEYRLGQCVISEVLRRGFYCFGSIRIGVVELYVCCER 60
+KN RIVPDEYTFAPLLKSC+NL +YRLG+CVI EVLRRGF CFGSIRIGVVELYVCCER
Sbjct: 98 LKNRRIVPDEYTFAPLLKSCSNLYDYRLGKCVIGEVLRRGFECFGSIRIGVVELYVCCER 157
Query: 61 MEDARKVFDEMPHRDVVVWNLMIRGFCKMGNVDFGLCLFRQMNERSLVSWNTMISCLAQN 120
M+DA+KVFDEMPH DVVVWNLMIRGFCKMGNVD GL LFRQMN+RSLVSWNT ISCLAQ+
Sbjct: 158 MDDAQKVFDEMPHTDVVVWNLMIRGFCKMGNVDLGLSLFRQMNDRSLVSWNTTISCLAQS 217
Query: 121 RRDVEALELFQQMEEYGFEPDEVTVVTMLPVCSRLGALDVGQRIHSYASSKGDLADITTI 180
RDVEALELFQQMEE+GFEPDEVTVVTMLPVCSRLGA+DVGQ IHSYA+SK DL + T +
Sbjct: 218 GRDVEALELFQQMEEHGFEPDEVTVVTMLPVCSRLGAIDVGQMIHSYATSKADLVNTTMV 277
Query: 181 GNSLVDFYCKCGNTERAYNIFQKITCKSVVSWNTLILGFALNGKGEVAIDLFMEMGKEDV 240
GNSL+DFYCK GNTERAYNIFQK+TCKSVVSWNT+ILGFALNGKGE+AIDLFMEMG+ D
Sbjct: 278 GNSLIDFYCKSGNTERAYNIFQKMTCKSVVSWNTMILGFALNGKGELAIDLFMEMGQGDA 337
Query: 241 KPNDATFVAVLTACVHSGLLEKGRDIFSSMAEKYGIQPKLEHFGCMVDLLGRGGCVEEAH 300
KPND T VA+LTACVHSGLLEKG+++FSSMAEKY I+PKLEHFGCMVDLLGRGGCVEEAH
Sbjct: 338 KPNDVTLVAILTACVHSGLLEKGQEVFSSMAEKYEIEPKLEHFGCMVDLLGRGGCVEEAH 397
Query: 301 NLIKSMPVQPNATLWGALLGACRTHGNLKLAEMAVKELITLEPWNSGNYVLLSNMFAEEG 360
+LI+SMP+QPNATLWGALLGACRTHGNLKLAEMAV ELI+LEP NSGNYVLLSN AEE
Sbjct: 398 SLIRSMPMQPNATLWGALLGACRTHGNLKLAEMAVNELISLEPSNSGNYVLLSNTLAEER 457
Query: 361 RWEDVENVRRWMRGKSVKKAPGQSASG 388
RWEDVENVRR MRGK+VKKAPG+SASG
Sbjct: 458 RWEDVENVRRSMRGKNVKKAPGRSASG 484
BLAST of Lsi11G006200 vs. ExPASy TrEMBL
Match:
A0A6J1FGY4 (pentatricopeptide repeat-containing protein At1g09190 OS=Cucurbita moschata OX=3662 GN=LOC111443903 PE=4 SV=1)
HSP 1 Score: 701.0 bits (1808), Expect = 2.7e-198
Identity = 332/387 (85.79%), Postives = 363/387 (93.80%), Query Frame = 0
Query: 1 MKNHRIVPDEYTFAPLLKSCANLCEYRLGQCVISEVLRRGFYCFGSIRIGVVELYVCCER 60
MKN RIVPDEYTFAPLLKSC+NL +YRLG+CVI EVLRRGF CFGSIRIGVVELYVCCE+
Sbjct: 98 MKNRRIVPDEYTFAPLLKSCSNLYDYRLGKCVIGEVLRRGFECFGSIRIGVVELYVCCEK 157
Query: 61 MEDARKVFDEMPHRDVVVWNLMIRGFCKMGNVDFGLCLFRQMNERSLVSWNTMISCLAQN 120
M+DA+KVFDEMP RDVVVWNLMIRGFCKMGNVD GL LFRQMN+RSLVSWNT ISCLAQ+
Sbjct: 158 MDDAQKVFDEMPRRDVVVWNLMIRGFCKMGNVDLGLSLFRQMNDRSLVSWNTTISCLAQS 217
Query: 121 RRDVEALELFQQMEEYGFEPDEVTVVTMLPVCSRLGALDVGQRIHSYASSKGDLADITTI 180
RDVEALELFQQ+EE+GFEPDEVTVVTMLPVCSRLGALDVGQ IHSYA+SK DL + T +
Sbjct: 218 GRDVEALELFQQIEEHGFEPDEVTVVTMLPVCSRLGALDVGQMIHSYATSKADLMNTTMV 277
Query: 181 GNSLVDFYCKCGNTERAYNIFQKITCKSVVSWNTLILGFALNGKGEVAIDLFMEMGKEDV 240
GNSL+DFYCK GNTERAYNIFQK+TCK+VVSWNT+ILGFALNGKGE+AIDLFMEMG+ DV
Sbjct: 278 GNSLIDFYCKSGNTERAYNIFQKMTCKNVVSWNTMILGFALNGKGELAIDLFMEMGRGDV 337
Query: 241 KPNDATFVAVLTACVHSGLLEKGRDIFSSMAEKYGIQPKLEHFGCMVDLLGRGGCVEEAH 300
KPNDAT VA+LTACVHSGLLEKGR++FSSMAEKY I+PKLEHFGCMVDLLGRGGCVEEAH
Sbjct: 338 KPNDATLVAILTACVHSGLLEKGREVFSSMAEKYEIEPKLEHFGCMVDLLGRGGCVEEAH 397
Query: 301 NLIKSMPVQPNATLWGALLGACRTHGNLKLAEMAVKELITLEPWNSGNYVLLSNMFAEEG 360
+LI+SMP+QPNATLWGALLGACRTHGNLKLAEMA ELI+LEP NSGNYVLLSN+ AEEG
Sbjct: 398 SLIRSMPMQPNATLWGALLGACRTHGNLKLAEMAANELISLEPSNSGNYVLLSNILAEEG 457
Query: 361 RWEDVENVRRWMRGKSVKKAPGQSASG 388
RW+DVENVR MRGK+VKKAPG+SASG
Sbjct: 458 RWKDVENVRCSMRGKNVKKAPGRSASG 484
BLAST of Lsi11G006200 vs. NCBI nr
Match:
XP_038890516.1 (pentatricopeptide repeat-containing protein At1g09190 [Benincasa hispida])
HSP 1 Score: 751.9 bits (1940), Expect = 2.7e-213
Identity = 356/387 (91.99%), Postives = 373/387 (96.38%), Query Frame = 0
Query: 1 MKNHRIVPDEYTFAPLLKSCANLCEYRLGQCVISEVLRRGFYCFGSIRIGVVELYVCCER 60
MKNHRIVPDEYTFAPLLKSCANL EY LGQCVI+EVLRRGFYCFGSIRIGVVELYVCCER
Sbjct: 98 MKNHRIVPDEYTFAPLLKSCANLREYSLGQCVIAEVLRRGFYCFGSIRIGVVELYVCCER 157
Query: 61 MEDARKVFDEMPHRDVVVWNLMIRGFCKMGNVDFGLCLFRQMNERSLVSWNTMISCLAQN 120
MEDARKVFDEMPHRDVVVWNLMIRGFCKMGNVDFGL LFRQMNERSL+SWNTM+SCLAQ+
Sbjct: 158 MEDARKVFDEMPHRDVVVWNLMIRGFCKMGNVDFGLYLFRQMNERSLISWNTMLSCLAQS 217
Query: 121 RRDVEALELFQQMEEYGFEPDEVTVVTMLPVCSRLGALDVGQRIHSYASSKGDLADITTI 180
R D EALELFQQMEE GF+PDEVTVVTMLPVCSRLGALDVGQRIH+YASSKGD+ D TTI
Sbjct: 218 RCDAEALELFQQMEECGFKPDEVTVVTMLPVCSRLGALDVGQRIHNYASSKGDMVDNTTI 277
Query: 181 GNSLVDFYCKCGNTERAYNIFQKITCKSVVSWNTLILGFALNGKGEVAIDLFMEMGKEDV 240
GNSLVDFYCKCGN ERAYNIFQK+TCKSVVSWNT+ILGFALNG GE AIDLFM+MGKEDV
Sbjct: 278 GNSLVDFYCKCGNVERAYNIFQKMTCKSVVSWNTMILGFALNGNGEFAIDLFMKMGKEDV 337
Query: 241 KPNDATFVAVLTACVHSGLLEKGRDIFSSMAEKYGIQPKLEHFGCMVDLLGRGGCVEEAH 300
KPNDATFVAVLTACVHSGLLEKGR++FSSMA+KY IQPKLEHFGCMVDLLGRGGC+EEAH
Sbjct: 338 KPNDATFVAVLTACVHSGLLEKGRELFSSMADKYEIQPKLEHFGCMVDLLGRGGCLEEAH 397
Query: 301 NLIKSMPVQPNATLWGALLGACRTHGNLKLAEMAVKELITLEPWNSGNYVLLSNMFAEEG 360
NLIKSMP+QPNATLWGALLGACRTHGNLKLAEMAVKEL +LEPWNSGNYVLLSNM AEEG
Sbjct: 398 NLIKSMPMQPNATLWGALLGACRTHGNLKLAEMAVKELSSLEPWNSGNYVLLSNMLAEEG 457
Query: 361 RWEDVENVRRWMRGKSVKKAPGQSASG 388
RWEDVENVRRWM+GKSVKKAPGQSASG
Sbjct: 458 RWEDVENVRRWMKGKSVKKAPGQSASG 484
BLAST of Lsi11G006200 vs. NCBI nr
Match:
XP_008453700.1 (PREDICTED: pentatricopeptide repeat-containing protein At1g09190 [Cucumis melo] >KAA0048057.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYJ96479.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])
HSP 1 Score: 742.7 bits (1916), Expect = 1.7e-210
Identity = 351/387 (90.70%), Postives = 369/387 (95.35%), Query Frame = 0
Query: 1 MKNHRIVPDEYTFAPLLKSCANLCEYRLGQCVISEVLRRGFYCFGSIRIGVVELYVCCER 60
MKNHRIVPD+YTFAPLLKSCANLCEY LGQCVISEVL RGFYCFGSIRIGVVELYVCCE+
Sbjct: 98 MKNHRIVPDQYTFAPLLKSCANLCEYSLGQCVISEVLHRGFYCFGSIRIGVVELYVCCEK 157
Query: 61 MEDARKVFDEMPHRDVVVWNLMIRGFCKMGNVDFGLCLFRQMNERSLVSWNTMISCLAQN 120
MEDA K FDEM HRDVVVWNLMIRGFCKMGNVDFGLCLFRQM+ERSLVSWNT+ISCLAQN
Sbjct: 158 MEDAWKAFDEMSHRDVVVWNLMIRGFCKMGNVDFGLCLFRQMSERSLVSWNTIISCLAQN 217
Query: 121 RRDVEALELFQQMEEYGFEPDEVTVVTMLPVCSRLGALDVGQRIHSYASSKGDLADITTI 180
RRDVEALELFQQMEE+GF+PDEVTVVTMLPVCSRLGAL+VGQRIHSY SSKG+L T +
Sbjct: 218 RRDVEALELFQQMEEHGFKPDEVTVVTMLPVCSRLGALEVGQRIHSYTSSKGNLVGTTMV 277
Query: 181 GNSLVDFYCKCGNTERAYNIFQKITCKSVVSWNTLILGFALNGKGEVAIDLFMEMGKEDV 240
GNSL+DFYCKCGN E AYNIFQK+TCKSVVSWNT+ILGFALNGKGE AIDLFMEM KEDV
Sbjct: 278 GNSLIDFYCKCGNIESAYNIFQKMTCKSVVSWNTIILGFALNGKGEFAIDLFMEMRKEDV 337
Query: 241 KPNDATFVAVLTACVHSGLLEKGRDIFSSMAEKYGIQPKLEHFGCMVDLLGRGGCVEEAH 300
KPNDATFVAVLTACVHSGLLEKGR++FSSMAE Y IQPKLEHFGCMVDLLGRGGCVEEAH
Sbjct: 338 KPNDATFVAVLTACVHSGLLEKGRELFSSMAEDYEIQPKLEHFGCMVDLLGRGGCVEEAH 397
Query: 301 NLIKSMPVQPNATLWGALLGACRTHGNLKLAEMAVKELITLEPWNSGNYVLLSNMFAEEG 360
NLIKSMP+QPNATLWGALLGACRTHGNLKLAEMAVKELI+LEPWNSGNYVLLSNM AEEG
Sbjct: 398 NLIKSMPMQPNATLWGALLGACRTHGNLKLAEMAVKELISLEPWNSGNYVLLSNMLAEEG 457
Query: 361 RWEDVENVRRWMRGKSVKKAPGQSASG 388
RWE+VENVR+WMR KSVKKAPGQSASG
Sbjct: 458 RWEEVENVRQWMREKSVKKAPGQSASG 484
BLAST of Lsi11G006200 vs. NCBI nr
Match:
XP_004144815.1 (pentatricopeptide repeat-containing protein At1g09190 isoform X1 [Cucumis sativus])
HSP 1 Score: 740.0 bits (1909), Expect = 1.1e-209
Identity = 349/387 (90.18%), Postives = 371/387 (95.87%), Query Frame = 0
Query: 1 MKNHRIVPDEYTFAPLLKSCANLCEYRLGQCVISEVLRRGFYCFGSIRIGVVELYVCCER 60
MKNHRIVPD+YTFAPLLKSCANLCEY LGQCVISEV RRGFYCFGSIRIGVVELYVCCE+
Sbjct: 98 MKNHRIVPDQYTFAPLLKSCANLCEYSLGQCVISEVFRRGFYCFGSIRIGVVELYVCCEK 157
Query: 61 MEDARKVFDEMPHRDVVVWNLMIRGFCKMGNVDFGLCLFRQMNERSLVSWNTMISCLAQN 120
MEDA K+FDEM HRDVVVWNLMIRGFCK GNVDFGLCLFRQM+ERSLVSWNT+ISCLAQN
Sbjct: 158 MEDAWKMFDEMSHRDVVVWNLMIRGFCKTGNVDFGLCLFRQMSERSLVSWNTIISCLAQN 217
Query: 121 RRDVEALELFQQMEEYGFEPDEVTVVTMLPVCSRLGALDVGQRIHSYASSKGDLADITTI 180
RRDVEALELFQQMEE+GF+PDEVTVVTMLPVCSRLGAL+VGQRIHSYASSKG+L ITT+
Sbjct: 218 RRDVEALELFQQMEEHGFKPDEVTVVTMLPVCSRLGALEVGQRIHSYASSKGNLVGITTV 277
Query: 181 GNSLVDFYCKCGNTERAYNIFQKITCKSVVSWNTLILGFALNGKGEVAIDLFMEMGKEDV 240
GNSL+DFYCKCGN E+AYNIFQK+TCKSVVSWNT+ILGFALNGKGE AIDLFMEM KE +
Sbjct: 278 GNSLIDFYCKCGNIEKAYNIFQKMTCKSVVSWNTIILGFALNGKGEFAIDLFMEMRKEYL 337
Query: 241 KPNDATFVAVLTACVHSGLLEKGRDIFSSMAEKYGIQPKLEHFGCMVDLLGRGGCVEEAH 300
KPNDATFVAVLTACVHSGLLEKGR++FSSMAE Y IQPKLEHFGCMVDLLGRGGCVEEAH
Sbjct: 338 KPNDATFVAVLTACVHSGLLEKGRELFSSMAEDYEIQPKLEHFGCMVDLLGRGGCVEEAH 397
Query: 301 NLIKSMPVQPNATLWGALLGACRTHGNLKLAEMAVKELITLEPWNSGNYVLLSNMFAEEG 360
LIKSMP+QPNATLWGA+LGACRTHGNLKLAEMAVKELI+LEPWNSGNYVLLSNM AEEG
Sbjct: 398 KLIKSMPMQPNATLWGAVLGACRTHGNLKLAEMAVKELISLEPWNSGNYVLLSNMLAEEG 457
Query: 361 RWEDVENVRRWMRGKSVKKAPGQSASG 388
RWE+VENVR+WMR KSVKKAPGQSASG
Sbjct: 458 RWEEVENVRQWMREKSVKKAPGQSASG 484
BLAST of Lsi11G006200 vs. NCBI nr
Match:
KAG6586227.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 708.4 bits (1827), Expect = 3.5e-200
Identity = 336/387 (86.82%), Postives = 364/387 (94.06%), Query Frame = 0
Query: 1 MKNHRIVPDEYTFAPLLKSCANLCEYRLGQCVISEVLRRGFYCFGSIRIGVVELYVCCER 60
MKN RIVPDEYTFAPLLKSC+NL +YRLG+CVI EVLRRGF CFGSIRIGVVELYVCCE+
Sbjct: 1 MKNRRIVPDEYTFAPLLKSCSNLYDYRLGKCVIGEVLRRGFECFGSIRIGVVELYVCCEK 60
Query: 61 MEDARKVFDEMPHRDVVVWNLMIRGFCKMGNVDFGLCLFRQMNERSLVSWNTMISCLAQN 120
M+DA+KVFDEMPHRDVVVWNLMIRGFCKMGNVD GL LFRQMN+RSLVSWNT ISCLAQ+
Sbjct: 61 MDDAQKVFDEMPHRDVVVWNLMIRGFCKMGNVDLGLSLFRQMNDRSLVSWNTTISCLAQS 120
Query: 121 RRDVEALELFQQMEEYGFEPDEVTVVTMLPVCSRLGALDVGQRIHSYASSKGDLADITTI 180
RDVEALELFQQMEE+GFEPDEVTVVTMLPVCSRLGALDVGQ IHSYA+SK DL + T +
Sbjct: 121 GRDVEALELFQQMEEHGFEPDEVTVVTMLPVCSRLGALDVGQMIHSYATSKADLVNTTMV 180
Query: 181 GNSLVDFYCKCGNTERAYNIFQKITCKSVVSWNTLILGFALNGKGEVAIDLFMEMGKEDV 240
GNSL+DFYCK GNTERAYNIFQK+TCKSVVSWNT+ILGFALNGKGE+AIDLFMEM + DV
Sbjct: 181 GNSLIDFYCKSGNTERAYNIFQKMTCKSVVSWNTMILGFALNGKGELAIDLFMEMVRGDV 240
Query: 241 KPNDATFVAVLTACVHSGLLEKGRDIFSSMAEKYGIQPKLEHFGCMVDLLGRGGCVEEAH 300
KPNDAT VA+LTACVHSGLLEKGR++FSSMAEKY I+PKLEHFGCMVDLLGRGGCVEEAH
Sbjct: 241 KPNDATLVAILTACVHSGLLEKGREVFSSMAEKYEIEPKLEHFGCMVDLLGRGGCVEEAH 300
Query: 301 NLIKSMPVQPNATLWGALLGACRTHGNLKLAEMAVKELITLEPWNSGNYVLLSNMFAEEG 360
+LI+SMP+QPNATLWGALLGACRTHGNLKLAEMA ELI+LEP NSGNYVLLSN+ AEEG
Sbjct: 301 SLIRSMPMQPNATLWGALLGACRTHGNLKLAEMAANELISLEPSNSGNYVLLSNILAEEG 360
Query: 361 RWEDVENVRRWMRGKSVKKAPGQSASG 388
RWEDVENVRR MRGK+VKKAPG+SASG
Sbjct: 361 RWEDVENVRRSMRGKNVKKAPGRSASG 387
BLAST of Lsi11G006200 vs. NCBI nr
Match:
XP_022965696.1 (pentatricopeptide repeat-containing protein At1g09190 [Cucurbita maxima])
HSP 1 Score: 701.4 bits (1809), Expect = 4.2e-198
Identity = 332/387 (85.79%), Postives = 361/387 (93.28%), Query Frame = 0
Query: 1 MKNHRIVPDEYTFAPLLKSCANLCEYRLGQCVISEVLRRGFYCFGSIRIGVVELYVCCER 60
+KN RIVPDEYTFAPLLKSC+NL +YRLG+CVI EVLRRGF CFGSIRIGVVELYVCCER
Sbjct: 98 LKNRRIVPDEYTFAPLLKSCSNLYDYRLGKCVIGEVLRRGFECFGSIRIGVVELYVCCER 157
Query: 61 MEDARKVFDEMPHRDVVVWNLMIRGFCKMGNVDFGLCLFRQMNERSLVSWNTMISCLAQN 120
M+DA+KVFDEMPH DVVVWNLMIRGFCKMGNVD GL LFRQMN+RSLVSWNT ISCLAQ+
Sbjct: 158 MDDAQKVFDEMPHTDVVVWNLMIRGFCKMGNVDLGLSLFRQMNDRSLVSWNTTISCLAQS 217
Query: 121 RRDVEALELFQQMEEYGFEPDEVTVVTMLPVCSRLGALDVGQRIHSYASSKGDLADITTI 180
RDVEALELFQQMEE+GFEPDEVTVVTMLPVCSRLGA+DVGQ IHSYA+SK DL + T +
Sbjct: 218 GRDVEALELFQQMEEHGFEPDEVTVVTMLPVCSRLGAIDVGQMIHSYATSKADLVNTTMV 277
Query: 181 GNSLVDFYCKCGNTERAYNIFQKITCKSVVSWNTLILGFALNGKGEVAIDLFMEMGKEDV 240
GNSL+DFYCK GNTERAYNIFQK+TCKSVVSWNT+ILGFALNGKGE+AIDLFMEMG+ D
Sbjct: 278 GNSLIDFYCKSGNTERAYNIFQKMTCKSVVSWNTMILGFALNGKGELAIDLFMEMGQGDA 337
Query: 241 KPNDATFVAVLTACVHSGLLEKGRDIFSSMAEKYGIQPKLEHFGCMVDLLGRGGCVEEAH 300
KPND T VA+LTACVHSGLLEKG+++FSSMAEKY I+PKLEHFGCMVDLLGRGGCVEEAH
Sbjct: 338 KPNDVTLVAILTACVHSGLLEKGQEVFSSMAEKYEIEPKLEHFGCMVDLLGRGGCVEEAH 397
Query: 301 NLIKSMPVQPNATLWGALLGACRTHGNLKLAEMAVKELITLEPWNSGNYVLLSNMFAEEG 360
+LI+SMP+QPNATLWGALLGACRTHGNLKLAEMAV ELI+LEP NSGNYVLLSN AEE
Sbjct: 398 SLIRSMPMQPNATLWGALLGACRTHGNLKLAEMAVNELISLEPSNSGNYVLLSNTLAEER 457
Query: 361 RWEDVENVRRWMRGKSVKKAPGQSASG 388
RWEDVENVRR MRGK+VKKAPG+SASG
Sbjct: 458 RWEDVENVRRSMRGKNVKKAPGRSASG 484
BLAST of Lsi11G006200 vs. TAIR 10
Match:
AT1G09190.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 457.6 bits (1176), Expect = 9.9e-129
Identity = 220/385 (57.14%), Postives = 288/385 (74.81%), Query Frame = 0
Query: 1 MKNHRIVPDEYTFAPLLKSCANLCEYRLGQCVISEVLRRGFYCFGSIRIGVVELYVCCER 60
MK+ I DEYT+APLLKSC++L + R G+CV E++R GF+ G IRIGVVELY R
Sbjct: 93 MKSRGIWADEYTYAPLLKSCSSLSDLRFGKCVHGELIRTGFHRLGKIRIGVVELYTSGGR 152
Query: 61 MEDARKVFDEMPHRDVVVWNLMIRGFCKMGNVDFGLCLFRQMNERSLVSWNTMISCLAQN 120
M DA+KVFDEM R+VVVWNLMIRGFC G+V+ GL LF+QM+ERS+VSWN+MIS L++
Sbjct: 153 MGDAQKVFDEMSERNVVVWNLMIRGFCDSGDVERGLHLFKQMSERSIVSWNSMISSLSKC 212
Query: 121 RRDVEALELFQQMEEYGFEPDEVTVVTMLPVCSRLGALDVGQRIHSYASSKGDLADITTI 180
RD EALELF +M + GF+PDE TVVT+LP+ + LG LD G+ IHS A S G D T+
Sbjct: 213 GRDREALELFCEMIDQGFDPDEATVVTVLPISASLGVLDTGKWIHSTAESSGLFKDFITV 272
Query: 181 GNSLVDFYCKCGNTERAYNIFQKITCKSVVSWNTLILGFALNGKGEVAIDLFMEMGKE-D 240
GN+LVDFYCK G+ E A IF+K+ ++VVSWNTLI G A+NGKGE IDLF M +E
Sbjct: 273 GNALVDFYCKSGDLEAATAIFRKMQRRNVVSWNTLISGSAVNGKGEFGIDLFDAMIEEGK 332
Query: 241 VKPNDATFVAVLTACVHSGLLEKGRDIFSSMAEKYGIQPKLEHFGCMVDLLGRGGCVEEA 300
V PN+ATF+ VL C ++G +E+G ++F M E++ ++ + EH+G MVDL+ R G + EA
Sbjct: 333 VAPNEATFLGVLACCSYTGQVERGEELFGLMMERFKLEARTEHYGAMVDLMSRSGRITEA 392
Query: 301 HNLIKSMPVQPNATLWGALLGACRTHGNLKLAEMAVKELITLEPWNSGNYVLLSNMFAEE 360
+K+MPV NA +WG+LL ACR+HG++KLAE+A EL+ +EP NSGNYVLLSN++AEE
Sbjct: 393 FKFLKNMPVNANAAMWGSLLSACRSHGDVKLAEVAAMELVKIEPGNSGNYVLLSNLYAEE 452
Query: 361 GRWEDVENVRRWMRGKSVKKAPGQS 385
GRW+DVE VR M+ ++K+ GQS
Sbjct: 453 GRWQDVEKVRTLMKKNRLRKSTGQS 477
BLAST of Lsi11G006200 vs. TAIR 10
Match:
AT5G44230.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 340.1 bits (871), Expect = 2.3e-93
Identity = 162/386 (41.97%), Postives = 243/386 (62.95%), Query Frame = 0
Query: 1 MKNHRIVPDEYTFAPLLKSCANLCEYRLGQCVISEVLRRGFYCFGSIRIGVVELYVCCER 60
M+ I P +TF+ LLK+C + + LG+ ++ R +CF + ++++YV CE
Sbjct: 140 MRKEEITPVSFTFSALLKACGTMKDLNLGRQFHAQTFRLRGFCFVYVGNTMIDMYVKCES 199
Query: 61 MEDARKVFDEMPHRDVVVWNLMIRGFCKMGNVDFGLCLFRQMNERSLVSWNTMISCLAQN 120
++ ARKVFDEMP RDV+ W +I + ++GN++ LF + + +V+W M++ AQN
Sbjct: 200 IDCARKVFDEMPERDVISWTELIAAYARVGNMECAAELFESLPTKDMVAWTAMVTGFAQN 259
Query: 121 RRDVEALELFQQMEEYGFEPDEVTVVTMLPVCSRLGALDVGQRIHSYASSKG-DLADITT 180
+ EALE F +ME+ G DEVTV + C++LGA R A G +D
Sbjct: 260 AKPQEALEYFDRMEKSGIRADEVTVAGYISACAQLGASKYADRAVQIAQKSGYSPSDHVV 319
Query: 181 IGNSLVDFYCKCGNTERAYNIFQKITCKSVVSWNTLILGFALNGKGEVAIDLFMEM-GKE 240
IG++L+D Y KCGN E A N+F + K+V +++++ILG A +G+ + A+ LF M +
Sbjct: 320 IGSALIDMYSKCGNVEEAVNVFMSMNNKNVFTYSSMILGLATHGRAQEALHLFHYMVTQT 379
Query: 241 DVKPNDATFVAVLTACVHSGLLEKGRDIFSSMAEKYGIQPKLEHFGCMVDLLGRGGCVEE 300
++KPN TFV L AC HSGL+++GR +F SM + +G+QP +H+ CMVDLLGR G ++E
Sbjct: 380 EIKPNTVTFVGALMACSHSGLVDQGRQVFDSMYQTFGVQPTRDHYTCMVDLLGRTGRLQE 439
Query: 301 AHNLIKSMPVQPNATLWGALLGACRTHGNLKLAEMAVKELITLEPWNSGNYVLLSNMFAE 360
A LIK+M V+P+ +WGALLGACR H N ++AE+A + L LEP GNY+LLSN++A
Sbjct: 440 ALELIKTMSVEPHGGVWGALLGACRIHNNPEIAEIAAEHLFELEPDIIGNYILLSNVYAS 499
Query: 361 EGRWEDVENVRRWMRGKSVKKAPGQS 385
G W V VR+ ++ K +KK P S
Sbjct: 500 AGDWGGVLRVRKLIKEKGLKKTPAVS 525
BLAST of Lsi11G006200 vs. TAIR 10
Match:
AT5G56310.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 332.0 bits (850), Expect = 6.3e-91
Identity = 160/380 (42.11%), Postives = 246/380 (64.74%), Query Frame = 0
Query: 8 PDEYTFAPLLKSCANLCEYRLGQCVISEVLRRGFYCFGSIRIGVVELYVCCERMEDARKV 67
PD +TF +LK + + G+ + +V+ GF + G++++Y C + DARK+
Sbjct: 114 PDTFTFPFVLKIAVRVSDVWFGRQIHGQVVVFGFDSSVHVVTGLIQMYFSCGGLGDARKM 173
Query: 68 FDEMPHRDVVVWNLMIRGFCKMGNVDFGLCLFRQMN--ERSLVSWNTMISCLAQNRRDVE 127
FDEM +DV VWN ++ G+ K+G +D L M R+ VSW +IS A++ R E
Sbjct: 174 FDEMLVKDVNVWNALLAGYGKVGEMDEARSLLEMMPCWVRNEVSWTCVISGYAKSGRASE 233
Query: 128 ALELFQQMEEYGFEPDEVTVVTMLPVCSRLGALDVGQRIHSYASSKGDLADITTIGNSLV 187
A+E+FQ+M EPDEVT++ +L C+ LG+L++G+RI SY +G + ++ N+++
Sbjct: 234 AIEVFQRMLMENVEPDEVTLLAVLSACADLGSLELGERICSYVDHRG-MNRAVSLNNAVI 293
Query: 188 DFYCKCGNTERAYNIFQKITCKSVVSWNTLILGFALNGKGEVAIDLFMEMGKEDVKPNDA 247
D Y K GN +A ++F+ + ++VV+W T+I G A +G G A+ +F M K V+PND
Sbjct: 294 DMYAKSGNITKALDVFECVNERNVVTWTTIIAGLATHGHGAEALAMFNRMVKAGVRPNDV 353
Query: 248 TFVAVLTACVHSGLLEKGRDIFSSMAEKYGIQPKLEHFGCMVDLLGRGGCVEEAHNLIKS 307
TF+A+L+AC H G ++ G+ +F+SM KYGI P +EH+GCM+DLLGR G + EA +IKS
Sbjct: 354 TFIAILSACSHVGWVDLGKRLFNSMRSKYGIHPNIEHYGCMIDLLGRAGKLREADEVIKS 413
Query: 308 MPVQPNATLWGALLGACRTHGNLKLAEMAVKELITLEPWNSGNYVLLSNMFAEEGRWEDV 367
MP + NA +WG+LL A H +L+L E A+ ELI LEP NSGNY+LL+N+++ GRW++
Sbjct: 414 MPFKANAAIWGSLLAASNVHHDLELGERALSELIKLEPNNSGNYMLLANLYSNLGRWDES 473
Query: 368 ENVRRWMRGKSVKKAPGQSA 386
+R M+G VKK G+S+
Sbjct: 474 RMMRNMMKGIGVKKMAGESS 492
BLAST of Lsi11G006200 vs. TAIR 10
Match:
AT2G20540.1 (mitochondrial editing factor 21 )
HSP 1 Score: 328.6 bits (841), Expect = 6.9e-90
Identity = 152/378 (40.21%), Postives = 249/378 (65.87%), Query Frame = 0
Query: 7 VPDEYTFAPLLKSCANLCEYRLGQCVISEVLRRGFYCFGSIRIGVVELYVCCERMEDARK 66
+PD +TF + KSCA+L LG+ V + + G ++++Y+ + + DA K
Sbjct: 106 LPDRFTFPFMFKSCASLGSCYLGKQVHGHLCKFGPRFHVVTENALIDMYMKFDDLVDAHK 165
Query: 67 VFDEMPHRDVVVWNLMIRGFCKMGNVDFGLCLFRQMNERSLVSWNTMISCLAQNRRDVEA 126
VFDEM RDV+ WN ++ G+ ++G + LF M ++++VSW MIS VEA
Sbjct: 166 VFDEMYERDVISWNSLLSGYARLGQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEA 225
Query: 127 LELFQQMEEYGFEPDEVTVVTMLPVCSRLGALDVGQRIHSYASSKGDLADITTIGNSLVD 186
++ F++M+ G EPDE++++++LP C++LG+L++G+ IH YA +G L T + N+L++
Sbjct: 226 MDFFREMQLAGIEPDEISLISVLPSCAQLGSLELGKWIHLYAERRGFLKQ-TGVCNALIE 285
Query: 187 FYCKCGNTERAYNIFQKITCKSVVSWNTLILGFALNGKGEVAIDLFMEMGKEDVKPNDAT 246
Y KCG +A +F ++ K V+SW+T+I G+A +G AI+ F EM + VKPN T
Sbjct: 286 MYSKCGVISQAIQLFGQMEGKDVISWSTMISGYAYHGNAHGAIETFNEMQRAKVKPNGIT 345
Query: 247 FVAVLTACVHSGLLEKGRDIFSSMAEKYGIQPKLEHFGCMVDLLGRGGCVEEAHNLIKSM 306
F+ +L+AC H G+ ++G F M + Y I+PK+EH+GC++D+L R G +E A + K+M
Sbjct: 346 FLGLLSACSHVGMWQEGLRYFDMMRQDYQIEPKIEHYGCLIDVLARAGKLERAVEITKTM 405
Query: 307 PVQPNATLWGALLGACRTHGNLKLAEMAVKELITLEPWNSGNYVLLSNMFAEEGRWEDVE 366
P++P++ +WG+LL +CRT GNL +A +A+ L+ LEP + GNYVLL+N++A+ G+WEDV
Sbjct: 406 PMKPDSKIWGSLLSSCRTPGNLDVALVAMDHLVELEPEDMGNYVLLANIYADLGKWEDVS 465
Query: 367 NVRRWMRGKSVKKAPGQS 385
+R+ +R +++KK PG S
Sbjct: 466 RLRKMIRNENMKKTPGGS 482
BLAST of Lsi11G006200 vs. TAIR 10
Match:
AT4G02750.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 322.8 bits (826), Expect = 3.8e-88
Identity = 156/330 (47.27%), Postives = 219/330 (66.36%), Query Frame = 0
Query: 55 YVCCERMEDARKVFDEMPHRDVVVWNLMIRGFCKMGNVDFGLCLFRQMNERSLVSWNTMI 114
YV ERME A+++FD MP R+V WN MI G+ + G + LF +M +R VSW MI
Sbjct: 322 YVQGERMEMAKELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMI 381
Query: 115 SCLAQNRRDVEALELFQQMEEYGFEPDEVTVVTMLPVCSRLGALDVGQRIHSYASSKGDL 174
+ +Q+ EAL LF QME G + + + L C+ + AL++G+++H KG
Sbjct: 382 AGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHG-RLVKGGY 441
Query: 175 ADITTIGNSLVDFYCKCGNTERAYNIFQKITCKSVVSWNTLILGFALNGKGEVAIDLFME 234
+GN+L+ YCKCG+ E A ++F+++ K +VSWNT+I G++ +G GEVA+ F
Sbjct: 442 ETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFES 501
Query: 235 MGKEDVKPNDATFVAVLTACVHSGLLEKGRDIFSSMAEKYGIQPKLEHFGCMVDLLGRGG 294
M +E +KP+DAT VAVL+AC H+GL++KGR F +M + YG+ P +H+ CMVDLLGR G
Sbjct: 502 MKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAG 561
Query: 295 CVEEAHNLIKSMPVQPNATLWGALLGACRTHGNLKLAEMAVKELITLEPWNSGNYVLLSN 354
+E+AHNL+K+MP +P+A +WG LLGA R HGN +LAE A ++ +EP NSG YVLLSN
Sbjct: 562 LLEDAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSN 621
Query: 355 MFAEEGRWEDVENVRRWMRGKSVKKAPGQS 385
++A GRW DV +R MR K VKK PG S
Sbjct: 622 LYASSGRWGDVGKLRVRMRDKGVKKVPGYS 650
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
O80488 | 1.4e-127 | 57.14 | Pentatricopeptide repeat-containing protein At1g09190 OS=Arabidopsis thaliana OX... | [more] |
Q9FFG8 | 3.2e-92 | 41.97 | Pentatricopeptide repeat-containing protein At5g44230 OS=Arabidopsis thaliana OX... | [more] |
Q9FMA1 | 8.8e-90 | 42.11 | Pentatricopeptide repeat-containing protein At5g56310 OS=Arabidopsis thaliana OX... | [more] |
Q9SIL5 | 9.8e-89 | 40.21 | Pentatricopeptide repeat-containing protein At2g20540 OS=Arabidopsis thaliana OX... | [more] |
Q9SY02 | 5.4e-87 | 47.27 | Pentatricopeptide repeat-containing protein At4g02750 OS=Arabidopsis thaliana OX... | [more] |
Match Name | E-value | Identity | Description | |
A0A5A7U1F2 | 8.0e-211 | 90.70 | Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... | [more] |
A0A1S3BXN7 | 8.0e-211 | 90.70 | pentatricopeptide repeat-containing protein At1g09190 OS=Cucumis melo OX=3656 GN... | [more] |
A0A0A0LJW6 | 5.2e-210 | 90.18 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G033910 PE=4 SV=1 | [more] |
A0A6J1HMD5 | 2.0e-198 | 85.79 | pentatricopeptide repeat-containing protein At1g09190 OS=Cucurbita maxima OX=366... | [more] |
A0A6J1FGY4 | 2.7e-198 | 85.79 | pentatricopeptide repeat-containing protein At1g09190 OS=Cucurbita moschata OX=3... | [more] |
Match Name | E-value | Identity | Description | |
XP_038890516.1 | 2.7e-213 | 91.99 | pentatricopeptide repeat-containing protein At1g09190 [Benincasa hispida] | [more] |
XP_008453700.1 | 1.7e-210 | 90.70 | PREDICTED: pentatricopeptide repeat-containing protein At1g09190 [Cucumis melo] ... | [more] |
XP_004144815.1 | 1.1e-209 | 90.18 | pentatricopeptide repeat-containing protein At1g09190 isoform X1 [Cucumis sativu... | [more] |
KAG6586227.1 | 3.5e-200 | 86.82 | Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub... | [more] |
XP_022965696.1 | 4.2e-198 | 85.79 | pentatricopeptide repeat-containing protein At1g09190 [Cucurbita maxima] | [more] |
Match Name | E-value | Identity | Description | |
AT1G09190.1 | 9.9e-129 | 57.14 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT5G44230.1 | 2.3e-93 | 41.97 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT5G56310.1 | 6.3e-91 | 42.11 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT2G20540.1 | 6.9e-90 | 40.21 | mitochondrial editing factor 21 | [more] |
AT4G02750.1 | 3.8e-88 | 47.27 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |