Lag0020079.1 (mRNA) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGATGCAAGCGTTCGACAATCTAAAACTTGTTGGTAATCTTGTATCTCTCGGTGACCTTATCTCTTATGTACTTGTTGGCTTAAACGACCCTTATTATATTCTGATTGTTTGTTCGATTGAGGATAAGGACATAAAAACATGGCAAGAATTGAGCTCAAGTTTAGTAACCTTTGAAGGCCCGTTAGCTAGATATAACACTATTAATAATGTTAATGGAGGAGATCAACTCCCTGATTTGGCTGCTCACTTAGCACTGAATAAGCAAGGTAGGTTCAGTAATCAACGACAGTTTAGCCCTAATACTGGAAATAGAGGTAATGGGAATGGATCTGGCAATGGTCAACCAAATTTTTCGAGGAACAATAATGGTGGAAACAAAGGAGGTCGAGGAAGAGGCAGAAACAATTATCAGAACAAAATATTAAGAAGAATCTACGTACCTTTTAAGATCTTAGACTTAGAATAA ATGATGCAAGCGTTCGACAATCTAAAACTTGTTGGTAATCTTGTATCTCTCGGTGACCTTATCTCTTATGTACTTGTTGGCTTAAACGACCCTTATTATATTCTGATTGTTTGTTCGATTGAGGATAAGGACATAAAAACATGGCAAGAATTGAGCTCAAGTTTAGTAACCTTTGAAGGCCCGTTAGCTAGATATAACACTATTAATAATGTTAATGGAGGAGATCAACTCCCTGATTTGGCTGCTCACTTAGCACTGAATAAGCAAGGTAGGTTCAGTAATCAACGACAGTTTAGCCCTAATACTGGAAATAGAGGTAATGGGAATGGATCTGGCAATGGTCAACCAAATTTTTCGAGGAACAATAATGGTGGAAACAAAGGAGGTCGAGGAAGAGGCAGAAACAATTATCAGAACAAAATATTAAGAAGAATCTACGTACCTTTTAAGATCTTAGACTTAGAATAA ATGATGCAAGCGTTCGACAATCTAAAACTTGTTGGTAATCTTGTATCTCTCGGTGACCTTATCTCTTATGTACTTGTTGGCTTAAACGACCCTTATTATATTCTGATTGTTTGTTCGATTGAGGATAAGGACATAAAAACATGGCAAGAATTGAGCTCAAGTTTAGTAACCTTTGAAGGCCCGTTAGCTAGATATAACACTATTAATAATGTTAATGGAGGAGATCAACTCCCTGATTTGGCTGCTCACTTAGCACTGAATAAGCAAGGTAGGTTCAGTAATCAACGACAGTTTAGCCCTAATACTGGAAATAGAGGTAATGGGAATGGATCTGGCAATGGTCAACCAAATTTTTCGAGGAACAATAATGGTGGAAACAAAGGAGGTCGAGGAAGAGGCAGAAACAATTATCAGAACAAAATATTAAGAAGAATCTACGTACCTTTTAAGATCTTAGACTTAGAATAA MMQAFDNLKLVGNLVSLGDLISYVLVGLNDPYYILIVCSIEDKDIKTWQELSSSLVTFEGPLARYNTINNVNGGDQLPDLAAHLALNKQGRFSNQRQFSPNTGNRGNGNGSGNGQPNFSRNNNGGNKGGRGRGRNNYQNKILRRIYVPFKILDLE Homology
BLAST of Lag0020079.1 vs. NCBI nr
Match: QWX09785.1 (hydroxymethylglutaryl-CoA synthase [Pistacia terebinthus subsp. palaestina]) HSP 1 Score: 68.2 bits (165), Expect = 7.3e-08 Identity = 40/88 (45.45%), Postives = 56/88 (63.64%), Query Frame = 0
BLAST of Lag0020079.1 vs. NCBI nr
Match: XP_022157748.1 (uncharacterized protein LOC111024384 isoform X1 [Momordica charantia]) HSP 1 Score: 66.6 bits (161), Expect = 2.1e-07 Identity = 53/134 (39.55%), Postives = 74/134 (55.22%), Query Frame = 0
BLAST of Lag0020079.1 vs. NCBI nr
Match: XP_022157750.1 (uncharacterized protein LOC111024384 isoform X2 [Momordica charantia]) HSP 1 Score: 66.6 bits (161), Expect = 2.1e-07 Identity = 53/134 (39.55%), Postives = 74/134 (55.22%), Query Frame = 0
BLAST of Lag0020079.1 vs. NCBI nr
Match: KAA0065397.1 (putative LRR receptor-like serine/threonine-protein kinase [Cucumis melo var. makuwa] >TYK28882.1 putative LRR receptor-like serine/threonine-protein kinase [Cucumis melo var. makuwa]) HSP 1 Score: 64.3 bits (155), Expect = 1.1e-06 Identity = 45/116 (38.79%), Postives = 63/116 (54.31%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
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