Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACTCTAGTAGAAGTCATTTTAAAAGGTCCGAAACGACACCCGTTGACTTACCCAAGGAAAGGAAAGCTATCTCCAAACAAGCCTGCCGCGGGACCCGAGAACTTAAGCGTCAACTCCTTACTACCTTCAAGGGAGAAAAGTAGGGCCATATCTTATTCCAATATTCAAACTCGAATCGGATGTAGCAACATTAGGGAATTCATCGAAAAAAATCCTTACCGAAAACTCACCGTGACCCGGAGTGGAGGAAGGAAGGCTTAG
mRNA sequence
ATGACTCTAGTAGAAGTCATTTTAAAAGGTCCGAAACGACACCCGTTGACTTACCCAAGGAAAGGAAAGCTATCTCCAAACAAGCCTGCCGCGGGACCCGAGAACTTAAGCGTCAACTCCTTACTACCTTCAAGGGAGAAAAGTAGGGCCATATCTTATTCCAATATTCAAACTCGAATCGGATGTAGCAACATTAGGGAATTCATCGAAAAAAATCCTTACCGAAAACTCACCGTGACCCGGAGTGGAGGAAGGAAGGCTTAG
Coding sequence (CDS)
ATGACTCTAGTAGAAGTCATTTTAAAAGGTCCGAAACGACACCCGTTGACTTACCCAAGGAAAGGAAAGCTATCTCCAAACAAGCCTGCCGCGGGACCCGAGAACTTAAGCGTCAACTCCTTACTACCTTCAAGGGAGAAAAGTAGGGCCATATCTTATTCCAATATTCAAACTCGAATCGGATGTAGCAACATTAGGGAATTCATCGAAAAAAATCCTTACCGAAAACTCACCGTGACCCGGAGTGGAGGAAGGAAGGCTTAG
Protein sequence
MTLVEVILKGPKRHPLTYPRKGKLSPNKPAAGPENLSVNSLLPSREKSRAISYSNIQTRIGCSNIREFIEKNPYRKLTVTRSGGRKA
Homology
BLAST of IVF0015098.1 vs. ExPASy TrEMBL
Match:
A0A5A7TNL7 (NBS-LRR type resistance protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold110G00460 PE=4 SV=1)
HSP 1 Score: 122.9 bits (307), Expect = 6.8e-25
Identity = 61/69 (88.41%), Postives = 65/69 (94.20%), Query Frame = 0
Query: 19 PRKGKLSPNKPAAGPENLSVNSLLPSREKSRAISYSNIQTRIGCSNIREFIEKNPYRKLT 78
P++ KLSP KPAAGPENLSVNS+LPSREKSRAISYSNIQT IGCSNIREFIE NPYR+LT
Sbjct: 277 PKERKLSPTKPAAGPENLSVNSVLPSREKSRAISYSNIQTLIGCSNIREFIENNPYRRLT 336
Query: 79 VTRSGGRKA 88
VTRSGGRKA
Sbjct: 337 VTRSGGRKA 345
BLAST of IVF0015098.1 vs. ExPASy TrEMBL
Match:
A0A5A7ULW2 (NBS-LRR type resistance protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold24G004710 PE=4 SV=1)
HSP 1 Score: 122.9 bits (307), Expect = 6.8e-25
Identity = 61/69 (88.41%), Postives = 65/69 (94.20%), Query Frame = 0
Query: 19 PRKGKLSPNKPAAGPENLSVNSLLPSREKSRAISYSNIQTRIGCSNIREFIEKNPYRKLT 78
P++ KLSP KPAAGPENLSVNS+LPSREKSRAISYSNIQT IGCSNIREFIE NPYR+LT
Sbjct: 131 PKERKLSPTKPAAGPENLSVNSVLPSREKSRAISYSNIQTLIGCSNIREFIENNPYRRLT 190
Query: 79 VTRSGGRKA 88
VTRSGGRKA
Sbjct: 191 VTRSGGRKA 199
BLAST of IVF0015098.1 vs. ExPASy TrEMBL
Match:
A0A5A7SQ80 (NBS-LRR type resistance protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold853G00300 PE=4 SV=1)
HSP 1 Score: 114.0 bits (284), Expect = 3.1e-22
Identity = 57/69 (82.61%), Postives = 61/69 (88.41%), Query Frame = 0
Query: 19 PRKGKLSPNKPAAGPENLSVNSLLPSREKSRAISYSNIQTRIGCSNIREFIEKNPYRKLT 78
P++ KLSP +PAA PENLSVNS LPSREKSR ISYSNIQT IGCSNIREFIE NPYR+L
Sbjct: 146 PQERKLSPTRPAAEPENLSVNSALPSREKSRVISYSNIQTLIGCSNIREFIENNPYRRLA 205
Query: 79 VTRSGGRKA 88
VTRSGGRKA
Sbjct: 206 VTRSGGRKA 214
BLAST of IVF0015098.1 vs. ExPASy TrEMBL
Match:
A0A5A7UMJ9 (NBS-LRR type resistance protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold741G00020 PE=4 SV=1)
HSP 1 Score: 111.3 bits (277), Expect = 2.0e-21
Identity = 57/67 (85.07%), Postives = 59/67 (88.06%), Query Frame = 0
Query: 10 GPKRHPLTYPRKGKLSPNKPAAGPENLSVNSLLPSREKSRAISYSNIQTRIGCSNIREFI 69
G KRHPLTYPRKGKL PNKP A PEN SVNS+LPSREKSRAISYSNIQT IGCSNIREFI
Sbjct: 76 GQKRHPLTYPRKGKLPPNKPTARPENSSVNSVLPSREKSRAISYSNIQTLIGCSNIREFI 135
Query: 70 EKNPYRK 77
E NP R+
Sbjct: 136 E-NPERR 141
BLAST of IVF0015098.1 vs. ExPASy TrEMBL
Match:
A0A5A7UGC7 (NBS-LRR type resistance protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold131G001680 PE=4 SV=1)
HSP 1 Score: 106.3 bits (264), Expect = 6.6e-20
Identity = 53/69 (76.81%), Postives = 59/69 (85.51%), Query Frame = 0
Query: 19 PRKGKLSPNKPAAGPENLSVNSLLPSREKSRAISYSNIQTRIGCSNIREFIEKNPYRKLT 78
P++ KLSP +P A PEN SV S LPS+EKSRAI+YSNIQ IGCSNIREFIE NPYR+LT
Sbjct: 110 PKERKLSPTRPTARPENPSVKSELPSKEKSRAITYSNIQALIGCSNIREFIENNPYRRLT 169
Query: 79 VTRSGGRKA 88
VTRSGGRKA
Sbjct: 170 VTRSGGRKA 178
BLAST of IVF0015098.1 vs. NCBI nr
Match:
KAA0054655.1 (NBS-LRR type resistance protein [Cucumis melo var. makuwa])
HSP 1 Score: 122 bits (305), Expect = 1.31e-32
Identity = 61/69 (88.41%), Postives = 65/69 (94.20%), Query Frame = 0
Query: 19 PRKGKLSPNKPAAGPENLSVNSLLPSREKSRAISYSNIQTRIGCSNIREFIEKNPYRKLT 78
P++ KLSP KPAAGPENLSVNS+LPSREKSRAISYSNIQT IGCSNIREFIE NPYR+LT
Sbjct: 131 PKERKLSPTKPAAGPENLSVNSVLPSREKSRAISYSNIQTLIGCSNIREFIENNPYRRLT 190
Query: 79 VTRSGGRKA 87
VTRSGGRKA
Sbjct: 191 VTRSGGRKA 199
BLAST of IVF0015098.1 vs. NCBI nr
Match:
KAA0043181.1 (NBS-LRR type resistance protein [Cucumis melo var. makuwa])
HSP 1 Score: 122 bits (305), Expect = 3.53e-31
Identity = 61/69 (88.41%), Postives = 65/69 (94.20%), Query Frame = 0
Query: 19 PRKGKLSPNKPAAGPENLSVNSLLPSREKSRAISYSNIQTRIGCSNIREFIEKNPYRKLT 78
P++ KLSP KPAAGPENLSVNS+LPSREKSRAISYSNIQT IGCSNIREFIE NPYR+LT
Sbjct: 277 PKERKLSPTKPAAGPENLSVNSVLPSREKSRAISYSNIQTLIGCSNIREFIENNPYRRLT 336
Query: 79 VTRSGGRKA 87
VTRSGGRKA
Sbjct: 337 VTRSGGRKA 345
BLAST of IVF0015098.1 vs. NCBI nr
Match:
KAA0032698.1 (NBS-LRR type resistance protein [Cucumis melo var. makuwa])
HSP 1 Score: 113 bits (282), Expect = 5.69e-29
Identity = 57/69 (82.61%), Postives = 61/69 (88.41%), Query Frame = 0
Query: 19 PRKGKLSPNKPAAGPENLSVNSLLPSREKSRAISYSNIQTRIGCSNIREFIEKNPYRKLT 78
P++ KLSP +PAA PENLSVNS LPSREKSR ISYSNIQT IGCSNIREFIE NPYR+L
Sbjct: 146 PQERKLSPTRPAAEPENLSVNSALPSREKSRVISYSNIQTLIGCSNIREFIENNPYRRLA 205
Query: 79 VTRSGGRKA 87
VTRSGGRKA
Sbjct: 206 VTRSGGRKA 214
BLAST of IVF0015098.1 vs. NCBI nr
Match:
KAA0057143.1 (NBS-LRR type resistance protein [Cucumis melo var. makuwa])
HSP 1 Score: 110 bits (276), Expect = 5.55e-27
Identity = 57/67 (85.07%), Postives = 59/67 (88.06%), Query Frame = 0
Query: 10 GPKRHPLTYPRKGKLSPNKPAAGPENLSVNSLLPSREKSRAISYSNIQTRIGCSNIREFI 69
G KRHPLTYPRKGKL PNKP A PEN SVNS+LPSREKSRAISYSNIQT IGCSNIREFI
Sbjct: 76 GQKRHPLTYPRKGKLPPNKPTARPENSSVNSVLPSREKSRAISYSNIQTLIGCSNIREFI 135
Query: 70 EKNPYRK 76
E NP R+
Sbjct: 136 E-NPERR 141
BLAST of IVF0015098.1 vs. NCBI nr
Match:
KAA0054224.1 (NBS-LRR type resistance protein [Cucumis melo var. makuwa])
HSP 1 Score: 105 bits (262), Expect = 2.36e-26
Identity = 53/69 (76.81%), Postives = 59/69 (85.51%), Query Frame = 0
Query: 19 PRKGKLSPNKPAAGPENLSVNSLLPSREKSRAISYSNIQTRIGCSNIREFIEKNPYRKLT 78
P++ KLSP +P A PEN SV S LPS+EKSRAI+YSNIQ IGCSNIREFIE NPYR+LT
Sbjct: 110 PKERKLSPTRPTARPENPSVKSELPSKEKSRAITYSNIQALIGCSNIREFIENNPYRRLT 169
Query: 79 VTRSGGRKA 87
VTRSGGRKA
Sbjct: 170 VTRSGGRKA 178
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A5A7TNL7 | 6.8e-25 | 88.41 | NBS-LRR type resistance protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_... | [more] |
A0A5A7ULW2 | 6.8e-25 | 88.41 | NBS-LRR type resistance protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_... | [more] |
A0A5A7SQ80 | 3.1e-22 | 82.61 | NBS-LRR type resistance protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_... | [more] |
A0A5A7UMJ9 | 2.0e-21 | 85.07 | NBS-LRR type resistance protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_... | [more] |
A0A5A7UGC7 | 6.6e-20 | 76.81 | NBS-LRR type resistance protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_... | [more] |
Match Name | E-value | Identity | Description | |
KAA0054655.1 | 1.31e-32 | 88.41 | NBS-LRR type resistance protein [Cucumis melo var. makuwa] | [more] |
KAA0043181.1 | 3.53e-31 | 88.41 | NBS-LRR type resistance protein [Cucumis melo var. makuwa] | [more] |
KAA0032698.1 | 5.69e-29 | 82.61 | NBS-LRR type resistance protein [Cucumis melo var. makuwa] | [more] |
KAA0057143.1 | 5.55e-27 | 85.07 | NBS-LRR type resistance protein [Cucumis melo var. makuwa] | [more] |
KAA0054224.1 | 2.36e-26 | 76.81 | NBS-LRR type resistance protein [Cucumis melo var. makuwa] | [more] |
Match Name | E-value | Identity | Description | |