HG10003008.1 (mRNA) Bottle gourd (Hangzhou Gourd) v1

InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
Position :
0
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ATGGCGACGCTGGAATCTGCAATTCCAATAATCTCTCAATACATTTCTTCTTCTTCCTCAAAATTATGCTTCAATAAACTTCCCTCCGCCATTAAGCTTCGAATTTCCTTCTCTTCCCCTCTCCTTTCCCTCAATCCCACAACCGCCATTTCCCCTCTCTCCCTCAATCCATCGCGAAATCGCGGCGGCGGCCGACTATGTTCTGCAGTGCAAGAGGTTAGTTTGGAGGAAGCTTCGGAGCAAAATCAGGATGTGAATCAGAAGAAAAAGCTATACATCTTCAATTTACCTTGGTCTTTCTCTGTTGTTGACATTAAGGAGCTCTTTGGACAATGCGGCACTATCACTGATGTTGAGATTATAAAGCAGAAAAATGGAAGGAGCAGGGGATTTGCCTTTGTGACTATGGCTTCACCAGATGAAGCTCAAGCTGCTATTCTGAAATTTGACTCTCAAGAAATATCAGGAAGAGTTATAAAGGTAGAGTTTGCAAGGAGATTGAAGAAACCTCCTCCTCCAAAGCCTCCTGGTCCCCCTCCTGGAGAGACGGTGAATAAACTTTATGTATCAAATCTTGCTTGGAAGGTGAGATCCAGCAATCTCAGAGAGTTCTTCTCTGAGAACTTTAACCCAGTTGCAGCCAGGGTTGTCTTTGATAGCCCTTCTGGAAGATCTGCTGGATACGGTTTTGTTTCTTTTGCTACTCGAGAGGAAGCTGAAACTGCACTTTCTTCATTGGAGGGGAAGGAATTGATGGGAAGACCGCTTCGCCTGAAATTCAGTGAAAGAAATGTCAGCGAATCAGAAACCCCAAAAGAAGACATTGTTGAAAGCCAACCTGAAGAATCATAG100200300400500600700800Expect = 5.3E-26 / Score = 102.4Expect = 1.3E-21 / Score = 87.8Expect = 1.5E-17 / Score = 63.2Expect = 1.6E-17 / Score = 63.1Score = 18.018063Score = 18.785557Expect = 3.6E-28 / Score = 100.5Expect = 7.8E-24 / Score = 86.4Score = Score = Score = Score = Score = Score = SequenceSM00360PF00076PS50102PS50102G3DSA:3.30.70.330mobidb-litemobidb-litePTHR48025:SF6PTHR48025SSF54928SSF54928
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000504RNA recognition motif domainSMARTSM00360rrm1_1coord: 90..162
e-value: 5.3E-26
score: 102.4
coord: 186..259
e-value: 1.3E-21
score: 87.8
IPR000504RNA recognition motif domainPFAMPF00076RRM_1coord: 91..160
e-value: 1.5E-17
score: 63.2
coord: 187..257
e-value: 1.6E-17
score: 63.1
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 185..263
score: 18.018063
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 89..166
score: 18.785557
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 169..273
e-value: 7.8E-24
score: 86.4
coord: 57..168
e-value: 3.6E-28
score: 100.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 262..283
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 262..277
NoneNo IPR availablePANTHERPTHR48025:SF6CHLOROPLAST, PUTATIVE-RELATEDcoord: 6..274
NoneNo IPR availablePANTHERPTHR48025OS02G0815200 PROTEINcoord: 6..274
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 170..264
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 80..176