Cucsat.G21286.T3 (mRNA) Cucumber (B10) v3

Overview
NameCucsat.G21286.T3
TypemRNA
OrganismCucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
DescriptionF-box domain-containing protein
Locationctg910: 479232 .. 482423 (+)
RNA-Seq ExpressionCucsat.G21286.T3
SyntenyCucsat.G21286.T3
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
AATCTCTCATTTACGAACATATTATCACCGCCTTTCATCTCCTTCCAGAGTAAGTCTTCTGTTTGTTCCCTTCATTCCATTTCTTTTCTTTCTGTTCATTTTTATAGACTCGTTTGATTTTTTGTTTTTTTGGGTATCAAAAGATTAGAGAAGATTTGGGTTGCTTTTGGTTATGGTTAGAAATTCAGTGATTTAGAATTTATGTGCTGAGTACTCATGTAGTTTTTTAGTTTCGATTTTCCGTATTTGAATCTAATTAGGAAATGTTGTGAATTGTTTGAATGTTTGATTTTGGCCATTTGGGAATTGTTCTGCTCAGTTCATTGATTAGGAAAATGTTTTTAAATTCTTTGTTTGTACTTGGTTGATTCTTGTATATTACTATTCATTTGTCACATCTGTCATTTTGCTGTCTTCGGCATGAGCTTGTCTTATTAGCTACTTCTTGTATAGTCTTTAGTTTCTTTAGTGGAGGAGAGTGATCATCTGTCCCGTTATCTATGGAATAGCTTTCCTTTTGAGGGTTCTATTGAATAGTTGGTGAGCAAAGATGAATATGCAGATGTAGCCAACTTTTTTCGTTTGAAGTTATGTACACCGTCGATTCTATCTTGTAGCATTGAATTTGAGCATAACTTCTATATTAATATGTATTTTCTGTGAATTTCTTCCTCTTTCCTCCCCCTTATTTGTTTACATTTTCTCAACGCTTATTAGAAAATGGGAGGTTTAATATAAAACCAATATGAAATTTTCTGATTAAGGTGTGGTTGATTTAACAAAAGAATGCAGACGAGCTCTGCTGCTTCTGCTGCACGTCTCCTTGCTCGGGCTGTTGAAGCTGCTTTGCCTAAGCAAAAGAGAAATTCAGTGATTGTAGAATTTAAGAAAGCAATGGTTGTTCATAAGAGGCGTACTAAAGCACATCAGGAAGAAAAAGGTGAATTATTTGCTTCTTTGCTATTATTATACATCAAATTGAACATATTTTTCATGTTTTGCAATTCAATCTGATTGTTAACTCACAAATTCTTTAGGTTCTTGTCAACTCCCTCAAGATGTTCTTCTCCACATCTTCCGCTTTATAGATGTTCAATCTTTAGTTTCAGCTGGGCTAGTATGCCGGTAATTATCTATCATGATATTTCCTCATCTATCAACAAAGTTTGTTATTACCTTAACCATTCTCCTATTCAACTATTCAACTTAGTTTACTAGCCCCTCAAAGTTCACAAGCATTGCCAACGCTATTGCTTCCTTTAAGATAATGGTCGTTATGTAATCAATGTGAAGGTCGTGGAATGTAGCAGCAGAGGATGAATATCTGTGGCAGTTGCAGTATACAACATTTTTTGTTTGTTCTGATGACAATAGTAAATCCATTAATGATAAAGACAGTGAGGATGGCTTTGCTAGCAGTAGCACACCTCGTGTTGATTGGAAAGAGGAATTCAAGAAAGCATATGTAGGTGAGAATTGACACGGTCTCTAATTTCTGAACAATAATATATATGCCATTGAGTGATCAACTTAAATTTAAGAAAAATACTATCGTCCATGTAGCTTGTAGTTAGAAATATTTTTAGGGTATCAAAGGCAAATTAGTCTATAGCCAATGAATTTGTTAGTAGCAGTTGATTACAAATAAAGTTGGTGGGAGTTATTGTATTCCTTTATCTTTTTATCTTTCAGTTTCAGTATTATTCTACTTATCTGTGGTTTGTTACTTTTTTTATTCTTAATAAAACAAAAAGTTTAATCAATAGTTTTGATTTGATAATAATTATTTGTACTATGGTGTTTGGAATGATAGGTAATTCTTTGGGGAGAAACACATATGGAAGGGGATACTGCAAACACTGTGACACAATAGTTTCCTTTAGTACCTTGAGATGTCCGAATGATCATGGTAGAAATAAAAACACACAAATCAAGCCTCTGTCAATCAACCAGGTACTTTTTTCTATCCCTTTTTCCTAAGTTCATTTTCAGGGTCTTTTTGGTCAGCTTTCGCTCCTCTACTCTCTTATTCTGGTTACATGAATCTTTCTCTCTGACGGCAAGTGTAGTTTTTCTATTCTCTCCAGCACACTGAATTGAAATTGCTTTTGCTTATTTGAATGGTCACTTTTCATGAAACTGACTTCTTTTCAGGCTGATGGTAGTAGTATTGGCTTTTTTGCTATTGATTCTTTTAGAGGGGAAAAACACTTCCATGTTCTTTTGAAAGTATCTATAAAGATTTTGTAGCTGCTTTTTAAGTTTTTCAAGAATGCTTTTTTATGTATAGGGTTTTAAGTAAGATTGATTGGAGTCATTTCATTGTCTAAAAACTGATTCTGAATTGGCCTATCAGTTCAAGAAAAATTTAAACTAGATGCTGAAACCAGTGTTGGTTAAGTTGTCAAAAAATGTTCTTTAATTTTGCTTTTTTATAAATAAAGAAAAAACCATATTTGTTTAAAAGTTTCAATATTACCCACGATGTTTCATAAACATTTCAAAAATGACACTTGACTAGATATAGATATCTTTACCCGTAAGAATTTTATATGAAATTTGGTTGGGATGGGAATGATGTGACGAAGGTGACCAACAATGAAATTTGGATTGTTATATTGTTCCAAATCCTATTTTTTGGTTCATAATCTAAAAAGGGTGATTTTGAAAGGCTAATATTGCAACTTTTGAATGAATAAGAGTGTTTTGGACAACAGAATGGACCATCTGATGACCAAAATCCATAAATGAAACAATCAAATGATAAAGTAATCAAACAAACTGAAACATTTTTGGGTTTTGCTTTCGAACTGACGATGATGTGTCTCCTTCTTTTAGGTTGTTGAATATGTGTTAAATGGAGCGTCAGAATTGATTTATTCTTCAGATAGTGAAACTGATTCAGATGAAGATGTGATTTCTGAGTTTTGGGCTCTTCCAAAGTACTTAGGCAGCAGTGGAGCGAACTGATCCTATCCTAAAGGTGCAGATTTGAATCTTTTAACTTTTTGTCTTTGACGAGATAGTAATATTTTAACAACTGTAAAGAAGTTGCCTCGTCTATCTTGTTAACAGCTTAGATTGTAAATATATTTACCAATATCATTGAGAACGAATGAACTGGAGAGTATACAACAAATCAAGCCCACAAAAATTCTACTAAGGAAAGGGGGTTCGAGCAAAGCAAAATGT

Coding sequence (CDS)

ATGCAGACGAGCTCTGCTGCTTCTGCTGCACGTCTCCTTGCTCGGGCTGTTGAAGCTGCTTTGCCTAAGCAAAAGAGAAATTCAGTGATTGTAGAATTTAAGAAAGCAATGGTTGTTCATAAGAGGCGTACTAAAGCACATCAGGAAGAAAAAGGTTCTTGTCAACTCCCTCAAGATGTTCTTCTCCACATCTTCCGCTTTATAGATGTTCAATCTTTAGTTTCAGCTGGGCTAGTATGCCGGTCGTGGAATGTAGCAGCAGAGGATGAATATCTGTGGCAGTTGCAGTATACAACATTTTTTGTTTGTTCTGATGACAATAGTAAATCCATTAATGATAAAGACAGTGAGGATGGCTTTGCTAGCAGTAGCACACCTCGTGTTGATTGGAAAGAGGAATTCAAGAAAGCATATGTAGGTAATTCTTTGGGGAGAAACACATATGGAAGGGGATACTGCAAACACTGTGACACAATAGTTTCCTTTAGTACCTTGAGATGTCCGAATGATCATGGTAGAAATAAAAACACACAAATCAAGCCTCTGTCAATCAACCAGGTTGTTGAATATGTGTTAAATGGAGCGTCAGAATTGATTTATTCTTCAGATAGTGAAACTGATTCAGATGAAGATGTGATTTCTGAGTTTTGGGCTCTTCCAAAGTACTTAGGCAGCAGTGGAGCGAACTGA

Protein sequence

MQTSSAASAARLLARAVEAALPKQKRNSVIVEFKKAMVVHKRRTKAHQEEKGSCQLPQDVLLHIFRFIDVQSLVSAGLVCRSWNVAAEDEYLWQLQYTTFFVCSDDNSKSINDKDSEDGFASSSTPRVDWKEEFKKAYVGNSLGRNTYGRGYCKHCDTIVSFSTLRCPNDHGRNKNTQIKPLSINQVVEYVLNGASELIYSSDSETDSDEDVISEFWALPKYLGSSGAN
Homology
[Close]
BLAST of Cucsat.G21286.T3 vs. ExPASy Swiss-Prot
Match: Q9FLX3 (F-box protein At5g52880 OS=Arabidopsis thaliana OX=3702 GN=At5g52880 PE=2 SV=1)

HSP 1 Score: 154.1 bits (388), Expect = 2.0e-36
Identity = 100/231 (43.29%), Postives = 132/231 (57.14%), Query Frame = 0 

Query: 1   MQTSSAASAARLLARAVEAALPKQKRNSVIVEFKKAMVVHKRRTKAHQEEKGSC-QLPQD 60
           + TS+A SAA LL ++VEA LPKQK+N  IVEFK+A V  KRR+K  +EE      LPQD
Sbjct: 59  INTSAAVSAANLLLKSVEAVLPKQKKNLAIVEFKQAKVALKRRSKNREEEDIDIPSLPQD 118

Query: 61  VLLHIFRFIDVQSLVSAGLVCRSWNVAAEDEYLWQLQYTTFFVCSDDNSKSINDKDSEDG 120
           +L+HIF F+++ SLVS+  V RSWN A  +  LWQ Q+   F     N K +    S+  
Sbjct: 119 ILIHIFSFLEISSLVSSAQVSRSWNQATHENSLWQSQFDLHF-----NHKVLIRMQSD-- 178

Query: 121 FASSSTPRVDWKEEFKKAYV-GNSLGRNTYGRGYCKHCDTIVSFSTLRCPNDHGRNK--N 180
                   +DW+E FKKAY+  NS      GRGYC +CD+IV    LRC N   R K  N
Sbjct: 179 --------IDWREAFKKAYIAANSSEALRSGRGYCSYCDSIVWHENLRCLNKQCRLKSGN 238

Query: 181 TQIKPLSINQVVEYVLNGASELIYSSDSETDSDEDVI-SEFWAL---PKYL 224
             +  ++ +QVV Y+L      I SSD E++SD++      W L   P YL
Sbjct: 239 KPLDLITTHQVVNYLLG-----IESSDDESESDDEAFPGRLWKLSYVPDYL 269

[Close]
BLAST of Cucsat.G21286.T3 vs. ExPASy Swiss-Prot
Match: Q969U6 (F-box/WD repeat-containing protein 5 OS=Homo sapiens OX=9606 GN=FBXW5 PE=1 SV=1)

HSP 1 Score: 48.9 bits (115), Expect = 8.8e-05
Identity = 24/90 (26.67%), Postives = 42/90 (46.67%), Query Frame = 0 

Query: 49  EEKGSCQLPQDVLLHIFRFIDVQSLVSAGLVCRSWNVAAEDEYLWQLQYTTFFVCSDDNS 108
           +E G+  LP  ++  IF  +    +++AGLVCR W   + DE+LW+ Q+  ++  + D  
Sbjct: 2   DEGGTPLLPDSLVYQIFLSLGPADVLAAGLVCRQWQAVSRDEFLWREQFYRYYQVARD-- 61

Query: 109 KSINDKDSEDGFASSSTPRVDWKEEFKKAY 139
                              + W EEF++ Y
Sbjct: 62  ------------VPRHPAAMSWYEEFQRLY 77

[Close]
BLAST of Cucsat.G21286.T3 vs. ExPASy Swiss-Prot
Match: Q2T9S7 (F-box only protein 7 OS=Bos taurus OX=9913 GN=FBXO7 PE=2 SV=1)

HSP 1 Score: 48.5 bits (114), Expect = 1.2e-04
Identity = 29/87 (33.33%), Postives = 42/87 (48.28%), Query Frame = 0 

Query: 52  GSCQLPQDVLLHIFRFIDVQSLVSAGLVCRSWNVAAEDEYLWQLQYTTFFVCSDDNSKSI 111
           G   LP ++ L IFR +DV+S++S   VCR   + + D+ LW+  Y       D    SI
Sbjct: 330 GLVVLPLELKLRIFRLLDVRSVLSLSAVCRDLCITSNDQLLWRCLY-----LRDFRDGSI 389

Query: 112 NDKDSEDGFASSSTPRVDWKEEFKKAY 139
             +D+            DWKE +KK Y
Sbjct: 390 RGRDT------------DWKELYKKRY 399

[Close]
BLAST of Cucsat.G21286.T3 vs. ExPASy Swiss-Prot
Match: Q9Y3I1 (F-box only protein 7 OS=Homo sapiens OX=9606 GN=FBXO7 PE=1 SV=1)

HSP 1 Score: 48.1 bits (113), Expect = 1.5e-04
Identity = 28/88 (31.82%), Postives = 42/88 (47.73%), Query Frame = 0 

Query: 52  GSCQLPQDVLLHIFRFIDVQSLVSAGLVCRSWNVAAEDEYLWQLQYTTFFVCSDDNSKSI 111
           G   LP ++ L IFR +DV+S++S   VCR    A+ D  LW+  Y   F    DN+  +
Sbjct: 331 GLVVLPLELKLRIFRLLDVRSVLSLSAVCRDLFTASNDPLLWRFLYLRDF---RDNTVRV 390

Query: 112 NDKDSEDGFASSSTPRVDWKEEFKKAYV 140
            D               DWKE ++K ++
Sbjct: 391 QD--------------TDWKELYRKRHI 401

[Close]
BLAST of Cucsat.G21286.T3 vs. ExPASy Swiss-Prot
Match: Q4KLI9 (F-box/WD repeat-containing protein 5 OS=Rattus norvegicus OX=10116 GN=Fbxw5 PE=2 SV=1)

HSP 1 Score: 48.1 bits (113), Expect = 1.5e-04
Identity = 24/90 (26.67%), Postives = 40/90 (44.44%), Query Frame = 0 

Query: 49  EEKGSCQLPQDVLLHIFRFIDVQSLVSAGLVCRSWNVAAEDEYLWQLQYTTFFVCSDDNS 108
           +E G   LP  ++  IF  +    +++AGLVCR W   + DE+LW+ Q+  ++  + D  
Sbjct: 2   DEGGMPLLPDSLVYQIFLSLGPADVLAAGLVCRQWQAVSRDEFLWREQFYRYYQVARD-- 61

Query: 109 KSINDKDSEDGFASSSTPRVDWKEEFKKAY 139
                                W EEF++ Y
Sbjct: 62  ------------VPRHPAATSWYEEFRRLY 77

[Close]
BLAST of Cucsat.G21286.T3 vs. NCBI nr
Match: XP_011654641.1 (F-box protein At5g52880 isoform X2 [Cucumis sativus])

HSP 1 Score: 460 bits (1183), Expect = 2.78e-163
Identity = 229/229 (100.00%), Postives = 229/229 (100.00%), Query Frame = 0 

Query: 1   MQTSSAASAARLLARAVEAALPKQKRNSVIVEFKKAMVVHKRRTKAHQEEKGSCQLPQDV 60
           MQTSSAASAARLLARAVEAALPKQKRNSVIVEFKKAMVVHKRRTKAHQEEKGSCQLPQDV
Sbjct: 1   MQTSSAASAARLLARAVEAALPKQKRNSVIVEFKKAMVVHKRRTKAHQEEKGSCQLPQDV 60

Query: 61  LLHIFRFIDVQSLVSAGLVCRSWNVAAEDEYLWQLQYTTFFVCSDDNSKSINDKDSEDGF 120
           LLHIFRFIDVQSLVSAGLVCRSWNVAAEDEYLWQLQYTTFFVCSDDNSKSINDKDSEDGF
Sbjct: 61  LLHIFRFIDVQSLVSAGLVCRSWNVAAEDEYLWQLQYTTFFVCSDDNSKSINDKDSEDGF 120

Query: 121 ASSSTPRVDWKEEFKKAYVGNSLGRNTYGRGYCKHCDTIVSFSTLRCPNDHGRNKNTQIK 180
           ASSSTPRVDWKEEFKKAYVGNSLGRNTYGRGYCKHCDTIVSFSTLRCPNDHGRNKNTQIK
Sbjct: 121 ASSSTPRVDWKEEFKKAYVGNSLGRNTYGRGYCKHCDTIVSFSTLRCPNDHGRNKNTQIK 180

Query: 181 PLSINQVVEYVLNGASELIYSSDSETDSDEDVISEFWALPKYLGSSGAN 229
           PLSINQVVEYVLNGASELIYSSDSETDSDEDVISEFWALPKYLGSSGAN
Sbjct: 181 PLSINQVVEYVLNGASELIYSSDSETDSDEDVISEFWALPKYLGSSGAN 229

[Close]
BLAST of Cucsat.G21286.T3 vs. NCBI nr
Match: XP_031740911.1 (F-box protein At5g52880 isoform X1 [Cucumis sativus] >KGN49912.1 hypothetical protein Csa_000019 [Cucumis sativus])

HSP 1 Score: 460 bits (1183), Expect = 2.63e-162
Identity = 229/229 (100.00%), Postives = 229/229 (100.00%), Query Frame = 0 

Query: 1   MQTSSAASAARLLARAVEAALPKQKRNSVIVEFKKAMVVHKRRTKAHQEEKGSCQLPQDV 60
           MQTSSAASAARLLARAVEAALPKQKRNSVIVEFKKAMVVHKRRTKAHQEEKGSCQLPQDV
Sbjct: 63  MQTSSAASAARLLARAVEAALPKQKRNSVIVEFKKAMVVHKRRTKAHQEEKGSCQLPQDV 122

Query: 61  LLHIFRFIDVQSLVSAGLVCRSWNVAAEDEYLWQLQYTTFFVCSDDNSKSINDKDSEDGF 120
           LLHIFRFIDVQSLVSAGLVCRSWNVAAEDEYLWQLQYTTFFVCSDDNSKSINDKDSEDGF
Sbjct: 123 LLHIFRFIDVQSLVSAGLVCRSWNVAAEDEYLWQLQYTTFFVCSDDNSKSINDKDSEDGF 182

Query: 121 ASSSTPRVDWKEEFKKAYVGNSLGRNTYGRGYCKHCDTIVSFSTLRCPNDHGRNKNTQIK 180
           ASSSTPRVDWKEEFKKAYVGNSLGRNTYGRGYCKHCDTIVSFSTLRCPNDHGRNKNTQIK
Sbjct: 183 ASSSTPRVDWKEEFKKAYVGNSLGRNTYGRGYCKHCDTIVSFSTLRCPNDHGRNKNTQIK 242

Query: 181 PLSINQVVEYVLNGASELIYSSDSETDSDEDVISEFWALPKYLGSSGAN 229
           PLSINQVVEYVLNGASELIYSSDSETDSDEDVISEFWALPKYLGSSGAN
Sbjct: 243 PLSINQVVEYVLNGASELIYSSDSETDSDEDVISEFWALPKYLGSSGAN 291

[Close]
BLAST of Cucsat.G21286.T3 vs. NCBI nr
Match: XP_008437546.1 (PREDICTED: F-box protein At5g52880 isoform X3 [Cucumis melo] >KAA0042586.1 F-box protein [Cucumis melo var. makuwa] >TYK05989.1 F-box protein [Cucumis melo var. makuwa])

HSP 1 Score: 424 bits (1090), Expect = 4.20e-149
Identity = 211/227 (92.95%), Postives = 217/227 (95.59%), Query Frame = 0 

Query: 1   MQTSSAASAARLLARAVEAALPKQKRNSVIVEFKKAMVVHKRRTKAHQEEKGSCQLPQDV 60
           MQTSSAASAARLLA+AVEAALPKQKRNSVIVE+KKAMVVHKRR+KAHQEEKGSCQLPQDV
Sbjct: 1   MQTSSAASAARLLAQAVEAALPKQKRNSVIVEYKKAMVVHKRRSKAHQEEKGSCQLPQDV 60

Query: 61  LLHIFRFIDVQSLVSAGLVCRSWNVAAEDEYLWQLQYTTFFVCSDDNSKSINDKDSEDGF 120
           LLHIFRF+DVQSL SAGLVCRSWNVAA+DEYLWQLQYTTFF C DDNSK INDKDSED F
Sbjct: 61  LLHIFRFLDVQSLGSAGLVCRSWNVAADDEYLWQLQYTTFFGCPDDNSKPINDKDSEDDF 120

Query: 121 ASSSTPRVDWKEEFKKAYVGNSLGRNTYGRGYCKHCDTIVSFSTLRCPNDHGRNKNTQIK 180
           ASSSTP VDWKEEFKKAYVGNSLGRNT GRGYCKHCDTIVSFSTLRC NDHGRNKN QIK
Sbjct: 121 ASSSTPHVDWKEEFKKAYVGNSLGRNTCGRGYCKHCDTIVSFSTLRCTNDHGRNKNKQIK 180

Query: 181 PLSINQVVEYVLNGASELIYSSDSETDSDEDVISEFWALPKYLGSSG 227
           PLSINQVVEYVLNG+SELIYSSDSETDSDEDVISEFWALPKYLGS G
Sbjct: 181 PLSINQVVEYVLNGSSELIYSSDSETDSDEDVISEFWALPKYLGSRG 227

[Close]
BLAST of Cucsat.G21286.T3 vs. NCBI nr
Match: XP_008437544.1 (PREDICTED: F-box protein At5g52880 isoform X1 [Cucumis melo])

HSP 1 Score: 424 bits (1090), Expect = 3.88e-148
Identity = 211/227 (92.95%), Postives = 217/227 (95.59%), Query Frame = 0 

Query: 1   MQTSSAASAARLLARAVEAALPKQKRNSVIVEFKKAMVVHKRRTKAHQEEKGSCQLPQDV 60
           MQTSSAASAARLLA+AVEAALPKQKRNSVIVE+KKAMVVHKRR+KAHQEEKGSCQLPQDV
Sbjct: 63  MQTSSAASAARLLAQAVEAALPKQKRNSVIVEYKKAMVVHKRRSKAHQEEKGSCQLPQDV 122

Query: 61  LLHIFRFIDVQSLVSAGLVCRSWNVAAEDEYLWQLQYTTFFVCSDDNSKSINDKDSEDGF 120
           LLHIFRF+DVQSL SAGLVCRSWNVAA+DEYLWQLQYTTFF C DDNSK INDKDSED F
Sbjct: 123 LLHIFRFLDVQSLGSAGLVCRSWNVAADDEYLWQLQYTTFFGCPDDNSKPINDKDSEDDF 182

Query: 121 ASSSTPRVDWKEEFKKAYVGNSLGRNTYGRGYCKHCDTIVSFSTLRCPNDHGRNKNTQIK 180
           ASSSTP VDWKEEFKKAYVGNSLGRNT GRGYCKHCDTIVSFSTLRC NDHGRNKN QIK
Sbjct: 183 ASSSTPHVDWKEEFKKAYVGNSLGRNTCGRGYCKHCDTIVSFSTLRCTNDHGRNKNKQIK 242

Query: 181 PLSINQVVEYVLNGASELIYSSDSETDSDEDVISEFWALPKYLGSSG 227
           PLSINQVVEYVLNG+SELIYSSDSETDSDEDVISEFWALPKYLGS G
Sbjct: 243 PLSINQVVEYVLNGSSELIYSSDSETDSDEDVISEFWALPKYLGSRG 289

[Close]
BLAST of Cucsat.G21286.T3 vs. NCBI nr
Match: XP_038874450.1 (F-box protein At5g52880 isoform X2 [Benincasa hispida])

HSP 1 Score: 385 bits (988), Expect = 1.37e-133
Identity = 195/229 (85.15%), Postives = 204/229 (89.08%), Query Frame = 0 

Query: 1   MQTSSAASAARLLARAVEAALPKQKRNSVIVEFKKAMVVHKRRTKAHQEEKGSCQLPQDV 60
           MQTSSAASAA LLA+ VEAALPKQKRNS IVEFKKAMV HKRR+KAHQEEKGS QLPQDV
Sbjct: 1   MQTSSAASAAHLLAQGVEAALPKQKRNSAIVEFKKAMVAHKRRSKAHQEEKGSAQLPQDV 60

Query: 61  LLHIFRFIDVQSLVSAGLVCRSWNVAAEDEYLWQLQYTTFFVCSDDNSKSINDKDSEDGF 120
           LLHIFRF+DVQSLVSAGLVCRSWNVAA+DEYLWQLQYT FF CSDDNSK INDKDS D F
Sbjct: 61  LLHIFRFLDVQSLVSAGLVCRSWNVAADDEYLWQLQYTKFFGCSDDNSKPINDKDSVDDF 120

Query: 121 ASSSTPRVDWKEEFKKAYVGNSLGRNTYGRGYCKHCDTIVSFSTLRCPNDHGRNKNTQIK 180
           AS+    VDWKEEFK AY+ NSL RNT GRGYC+HCDTIVS STLRCPNDHGRNKN QIK
Sbjct: 121 ASAR--HVDWKEEFKSAYIVNSLRRNTNGRGYCRHCDTIVSSSTLRCPNDHGRNKNKQIK 180

Query: 181 PLSINQVVEYVLNGASELIYSSDSETDSDEDVISEFWALPKYLGSSGAN 229
           PLSINQVVEYVLNG++ELIYSSDSETDSDE VISEFWA PKYLGS   N
Sbjct: 181 PLSINQVVEYVLNGSTELIYSSDSETDSDEVVISEFWAFPKYLGSRRPN 227

[Close]
BLAST of Cucsat.G21286.T3 vs. ExPASy TrEMBL
Match: A0A0A0KNE5 (F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G139890 PE=4 SV=1)

HSP 1 Score: 460 bits (1183), Expect = 1.28e-162
Identity = 229/229 (100.00%), Postives = 229/229 (100.00%), Query Frame = 0 

Query: 1   MQTSSAASAARLLARAVEAALPKQKRNSVIVEFKKAMVVHKRRTKAHQEEKGSCQLPQDV 60
           MQTSSAASAARLLARAVEAALPKQKRNSVIVEFKKAMVVHKRRTKAHQEEKGSCQLPQDV
Sbjct: 63  MQTSSAASAARLLARAVEAALPKQKRNSVIVEFKKAMVVHKRRTKAHQEEKGSCQLPQDV 122

Query: 61  LLHIFRFIDVQSLVSAGLVCRSWNVAAEDEYLWQLQYTTFFVCSDDNSKSINDKDSEDGF 120
           LLHIFRFIDVQSLVSAGLVCRSWNVAAEDEYLWQLQYTTFFVCSDDNSKSINDKDSEDGF
Sbjct: 123 LLHIFRFIDVQSLVSAGLVCRSWNVAAEDEYLWQLQYTTFFVCSDDNSKSINDKDSEDGF 182

Query: 121 ASSSTPRVDWKEEFKKAYVGNSLGRNTYGRGYCKHCDTIVSFSTLRCPNDHGRNKNTQIK 180
           ASSSTPRVDWKEEFKKAYVGNSLGRNTYGRGYCKHCDTIVSFSTLRCPNDHGRNKNTQIK
Sbjct: 183 ASSSTPRVDWKEEFKKAYVGNSLGRNTYGRGYCKHCDTIVSFSTLRCPNDHGRNKNTQIK 242

Query: 181 PLSINQVVEYVLNGASELIYSSDSETDSDEDVISEFWALPKYLGSSGAN 229
           PLSINQVVEYVLNGASELIYSSDSETDSDEDVISEFWALPKYLGSSGAN
Sbjct: 243 PLSINQVVEYVLNGASELIYSSDSETDSDEDVISEFWALPKYLGSSGAN 291

[Close]
BLAST of Cucsat.G21286.T3 vs. ExPASy TrEMBL
Match: A0A5A7TKV8 (F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold376G00850 PE=4 SV=1)

HSP 1 Score: 424 bits (1090), Expect = 2.03e-149
Identity = 211/227 (92.95%), Postives = 217/227 (95.59%), Query Frame = 0 

Query: 1   MQTSSAASAARLLARAVEAALPKQKRNSVIVEFKKAMVVHKRRTKAHQEEKGSCQLPQDV 60
           MQTSSAASAARLLA+AVEAALPKQKRNSVIVE+KKAMVVHKRR+KAHQEEKGSCQLPQDV
Sbjct: 1   MQTSSAASAARLLAQAVEAALPKQKRNSVIVEYKKAMVVHKRRSKAHQEEKGSCQLPQDV 60

Query: 61  LLHIFRFIDVQSLVSAGLVCRSWNVAAEDEYLWQLQYTTFFVCSDDNSKSINDKDSEDGF 120
           LLHIFRF+DVQSL SAGLVCRSWNVAA+DEYLWQLQYTTFF C DDNSK INDKDSED F
Sbjct: 61  LLHIFRFLDVQSLGSAGLVCRSWNVAADDEYLWQLQYTTFFGCPDDNSKPINDKDSEDDF 120

Query: 121 ASSSTPRVDWKEEFKKAYVGNSLGRNTYGRGYCKHCDTIVSFSTLRCPNDHGRNKNTQIK 180
           ASSSTP VDWKEEFKKAYVGNSLGRNT GRGYCKHCDTIVSFSTLRC NDHGRNKN QIK
Sbjct: 121 ASSSTPHVDWKEEFKKAYVGNSLGRNTCGRGYCKHCDTIVSFSTLRCTNDHGRNKNKQIK 180

Query: 181 PLSINQVVEYVLNGASELIYSSDSETDSDEDVISEFWALPKYLGSSG 227
           PLSINQVVEYVLNG+SELIYSSDSETDSDEDVISEFWALPKYLGS G
Sbjct: 181 PLSINQVVEYVLNGSSELIYSSDSETDSDEDVISEFWALPKYLGSRG 227

[Close]
BLAST of Cucsat.G21286.T3 vs. ExPASy TrEMBL
Match: A0A1S3AUE6 (F-box protein At5g52880 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103482926 PE=4 SV=1)

HSP 1 Score: 424 bits (1090), Expect = 2.03e-149
Identity = 211/227 (92.95%), Postives = 217/227 (95.59%), Query Frame = 0 

Query: 1   MQTSSAASAARLLARAVEAALPKQKRNSVIVEFKKAMVVHKRRTKAHQEEKGSCQLPQDV 60
           MQTSSAASAARLLA+AVEAALPKQKRNSVIVE+KKAMVVHKRR+KAHQEEKGSCQLPQDV
Sbjct: 1   MQTSSAASAARLLAQAVEAALPKQKRNSVIVEYKKAMVVHKRRSKAHQEEKGSCQLPQDV 60

Query: 61  LLHIFRFIDVQSLVSAGLVCRSWNVAAEDEYLWQLQYTTFFVCSDDNSKSINDKDSEDGF 120
           LLHIFRF+DVQSL SAGLVCRSWNVAA+DEYLWQLQYTTFF C DDNSK INDKDSED F
Sbjct: 61  LLHIFRFLDVQSLGSAGLVCRSWNVAADDEYLWQLQYTTFFGCPDDNSKPINDKDSEDDF 120

Query: 121 ASSSTPRVDWKEEFKKAYVGNSLGRNTYGRGYCKHCDTIVSFSTLRCPNDHGRNKNTQIK 180
           ASSSTP VDWKEEFKKAYVGNSLGRNT GRGYCKHCDTIVSFSTLRC NDHGRNKN QIK
Sbjct: 121 ASSSTPHVDWKEEFKKAYVGNSLGRNTCGRGYCKHCDTIVSFSTLRCTNDHGRNKNKQIK 180

Query: 181 PLSINQVVEYVLNGASELIYSSDSETDSDEDVISEFWALPKYLGSSG 227
           PLSINQVVEYVLNG+SELIYSSDSETDSDEDVISEFWALPKYLGS G
Sbjct: 181 PLSINQVVEYVLNGSSELIYSSDSETDSDEDVISEFWALPKYLGSRG 227

[Close]
BLAST of Cucsat.G21286.T3 vs. ExPASy TrEMBL
Match: A0A1S3AUV1 (F-box protein At5g52880 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103482926 PE=4 SV=1)

HSP 1 Score: 424 bits (1090), Expect = 1.88e-148
Identity = 211/227 (92.95%), Postives = 217/227 (95.59%), Query Frame = 0 

Query: 1   MQTSSAASAARLLARAVEAALPKQKRNSVIVEFKKAMVVHKRRTKAHQEEKGSCQLPQDV 60
           MQTSSAASAARLLA+AVEAALPKQKRNSVIVE+KKAMVVHKRR+KAHQEEKGSCQLPQDV
Sbjct: 63  MQTSSAASAARLLAQAVEAALPKQKRNSVIVEYKKAMVVHKRRSKAHQEEKGSCQLPQDV 122

Query: 61  LLHIFRFIDVQSLVSAGLVCRSWNVAAEDEYLWQLQYTTFFVCSDDNSKSINDKDSEDGF 120
           LLHIFRF+DVQSL SAGLVCRSWNVAA+DEYLWQLQYTTFF C DDNSK INDKDSED F
Sbjct: 123 LLHIFRFLDVQSLGSAGLVCRSWNVAADDEYLWQLQYTTFFGCPDDNSKPINDKDSEDDF 182

Query: 121 ASSSTPRVDWKEEFKKAYVGNSLGRNTYGRGYCKHCDTIVSFSTLRCPNDHGRNKNTQIK 180
           ASSSTP VDWKEEFKKAYVGNSLGRNT GRGYCKHCDTIVSFSTLRC NDHGRNKN QIK
Sbjct: 183 ASSSTPHVDWKEEFKKAYVGNSLGRNTCGRGYCKHCDTIVSFSTLRCTNDHGRNKNKQIK 242

Query: 181 PLSINQVVEYVLNGASELIYSSDSETDSDEDVISEFWALPKYLGSSG 227
           PLSINQVVEYVLNG+SELIYSSDSETDSDEDVISEFWALPKYLGS G
Sbjct: 243 PLSINQVVEYVLNGSSELIYSSDSETDSDEDVISEFWALPKYLGSRG 289

[Close]
BLAST of Cucsat.G21286.T3 vs. ExPASy TrEMBL
Match: A0A6J1IBY0 (F-box protein At5g52880 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111471558 PE=4 SV=1)

HSP 1 Score: 370 bits (949), Expect = 5.22e-128
Identity = 187/229 (81.66%), Postives = 199/229 (86.90%), Query Frame = 0 

Query: 1   MQTSSAASAARLLARAVEAALPKQKRNSVIVEFKKAMVVHKRRTKAHQEEKGSCQLPQDV 60
           MQTSSA SAA LLA+ VEA+LPKQKRNS IVEFKKAMV HKRR+KA QE KGS QLPQDV
Sbjct: 1   MQTSSAVSAAHLLAQGVEASLPKQKRNSAIVEFKKAMVAHKRRSKARQEVKGSSQLPQDV 60

Query: 61  LLHIFRFIDVQSLVSAGLVCRSWNVAAEDEYLWQLQYTTFFVCSDDNSKSINDKDSEDGF 120
           LLHIFRF+D++SLVSAGLVCRSW+ AA+DEYLWQ QYTTFF CSD+    IND+DS DG 
Sbjct: 61  LLHIFRFLDIESLVSAGLVCRSWSAAADDEYLWQFQYTTFFGCSDE---PINDEDSVDGL 120

Query: 121 ASSSTPRVDWKEEFKKAYVGNSLGRNTYGRGYCKHCDTIVSFSTLRCPNDHGRNKNTQIK 180
           AS  TP VDWKE FK+AYVGNSL RN YGRGYCKHCDTIVSFSTLRCPNDHGRNKN QIK
Sbjct: 121 AS--TPHVDWKEAFKRAYVGNSLWRNRYGRGYCKHCDTIVSFSTLRCPNDHGRNKNRQIK 180

Query: 181 PLSINQVVEYVLNGASELIYSSDSETDSDEDVISEFWALPKYLGSSGAN 229
           PLSINQVVEYVLNG SELIYSSDS+TDSDE VISEFWALPKYLG    N
Sbjct: 181 PLSINQVVEYVLNGISELIYSSDSDTDSDEVVISEFWALPKYLGRRRPN 224

The following BLAST results are available for this feature:
BLAST of Cucsat.G21286.T3 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9FLX32.0e-3643.29F-box protein At5g52880 OS=Arabidopsis thaliana OX=3702 GN=At5g52880 PE=2 SV=1[more]
Q969U68.8e-0526.67F-box/WD repeat-containing protein 5 OS=Homo sapiens OX=9606 GN=FBXW5 PE=1 SV=1[more]
Q2T9S71.2e-0433.33F-box only protein 7 OS=Bos taurus OX=9913 GN=FBXO7 PE=2 SV=1[more]
Q9Y3I11.5e-0431.82F-box only protein 7 OS=Homo sapiens OX=9606 GN=FBXO7 PE=1 SV=1[more]
Q4KLI91.5e-0426.67F-box/WD repeat-containing protein 5 OS=Rattus norvegicus OX=10116 GN=Fbxw5 PE=2... [more]
BLAST of Cucsat.G21286.T3 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_011654641.12.78e-163100.00F-box protein At5g52880 isoform X2 [Cucumis sativus][more]
XP_031740911.12.63e-162100.00F-box protein At5g52880 isoform X1 [Cucumis sativus] >KGN49912.1 hypothetical pr... [more]
XP_008437546.14.20e-14992.95PREDICTED: F-box protein At5g52880 isoform X3 [Cucumis melo] >KAA0042586.1 F-box... [more]
XP_008437544.13.88e-14892.95PREDICTED: F-box protein At5g52880 isoform X1 [Cucumis melo][more]
XP_038874450.11.37e-13385.15F-box protein At5g52880 isoform X2 [Benincasa hispida][more]
BLAST of Cucsat.G21286.T3 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KNE51.28e-162100.00F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G139890 PE=4 ... [more]
A0A5A7TKV82.03e-14992.95F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold376G00850 ... [more]
A0A1S3AUE62.03e-14992.95F-box protein At5g52880 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103482926 PE=4 ... [more]
A0A1S3AUV11.88e-14892.95F-box protein At5g52880 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103482926 PE=4 ... [more]
A0A6J1IBY05.22e-12881.66F-box protein At5g52880 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111471558 P... [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001810F-box domainSMARTSM00256fbox_2coord: 56..96
e-value: 1.5E-7
score: 41.1
IPR001810F-box domainPFAMPF12937F-box-likecoord: 54..97
e-value: 2.4E-13
score: 49.7
IPR001810F-box domainPROSITEPS50181FBOXcoord: 50..96
score: 10.981155
NoneNo IPR availableGENE3D1.20.1280.50coord: 37..143
e-value: 2.2E-14
score: 55.1
NoneNo IPR availablePANTHERPTHR47744OS05G0526300 PROTEINcoord: 1..223
IPR036047F-box-like domain superfamilySUPERFAMILY81383F-box domaincoord: 54..137

Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Cucsat.G21286Cucsat.G21286gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cucsat.G21286.T3.E1Cucsat.G21286.T3.E1exon
Cucsat.G21286.T3.E2Cucsat.G21286.T3.E2exon
Cucsat.G21286.T3.E3Cucsat.G21286.T3.E3exon
Cucsat.G21286.T3.E4Cucsat.G21286.T3.E4exon
Cucsat.G21286.T3.E5Cucsat.G21286.T3.E5exon
Cucsat.G21286.T3.E6Cucsat.G21286.T3.E6exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cucsat.G21286.T3.C1Cucsat.G21286.T3.C1CDS
Cucsat.G21286.T3.C2Cucsat.G21286.T3.C2CDS
Cucsat.G21286.T3.C3Cucsat.G21286.T3.C3CDS
Cucsat.G21286.T3.C4Cucsat.G21286.T3.C4CDS
Cucsat.G21286.T3.C5Cucsat.G21286.T3.C5CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Cucsat.G21286.T3Cucsat.G21286.T3-proteinpolypeptide


GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding