Cucsat.G21286 (gene) Cucumber (B10) v3

Overview


Name	Cucsat.G21286
Type	gene
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	F-box domain-containing protein
Location	ctg910: 479635 .. 482423 (+)
RNA-Seq Expression	Cucsat.G21286
Synteny	Cucsat.G21286

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTTTAATCCTTTAGATTTCCGGGTTTTTTTTCGAAAATATAAAAGTTTGAGGGATTAAAGAGAAAAATTCTTTGGAATTTTCCAACAATATTTCTTCTTCTTCGATCTGTCCACTGCTCTGCGCTTCATCTTCTTCAATTCTCCGTTTCCAATTCCATTGTTTCAGCTCAGCTGCTCATATCGTTTCCGAATGTCAAATCCATTAGAGAGATACCACAAACTTTGCCTGATGGATTTTCTGGCGAAGAGTTACAGCTACCCATTAGCTTGTAAGGAGCTAAGCTTCTTAATCAGAGGTGCTTTCATTAAACTTCCCAAGAATCTCCAATCTCTCATTTACGAACATATTATCACCGCCTTTCATCTCCTTCCAGAGTAAGTCTTCTGTTTGTTCCCTTCATTCCATTTCTTTTCTTTCTGTTCATTTTTATAGACTCGTTTGATTTTTTGTTTTTTTGGGTATCAAAAGATTAGAGAAGATTTGGGTTGCTTTTGGTTATGGTTAGAAATTCAGTGATTTAGAATTTATGTGCTGAGTACTCATGTAGTTTTTTAGTTTCGATTTTCCGTATTTGAATCTAATTAGGAAATGTTGTGAATTGTTTGAATGTTTGATTTTGGCCATTTGGGAATTGTTCTGCTCAGTTCATTGATTAGGAAAATGTTTTTAAATTCTTTGTTTGTACTTGGTTGATTCTTGTATATTACTATTCATTTGTCACATCTGTCATTTTGCTGTCTTCGGCATGAGCTTGTCTTATTAGCTACTTCTTGTATAGTCTTTAGTTTCTTTAGTGGAGGAGAGTGATCATCTGTCCCGTTATCTATGGAATAGCTTTCCTTTTGAGGGTTCTATTGAATAGTTGGTGAGCAAAGATGAATATGCAGATGTAGCCAACTTTTTTCGTTTGAAGTTATGTACACCGTCGATTCTATCTTGTAGCATTGAATTTGAGCATAACTTCTATATTAATATGTATTTTCTGTGAATTTCTTCCTCTTTCCTCCCCCTTATTTGTTTACATTTTCTCAACGCTTATTAGAAAATGGGAGGTTTAATATAAAACCAATATGAAATTTTCTGATTAAGGTGTGGTTGATTTAACAAAAGAATGCAGACGAGCTCTGCTGCTTCTGCTGCACGTCTCCTTGCTCGGGCTGTTGAAGCTGCTTTGCCTAAGCAAAAGAGAAATTCAGTGATTGTAGAATTTAAGAAAGCAATGGTTGTTCATAAGAGGCGTACTAAAGCACATCAGGAAGAAAAAGGTGAATTATTTGCTTCTTTGCTATTATTATACATCAAATTGAACATATTTTTCATGTTTTGCAATTCAATCTGATTGTTAACTCACAAATTCTTTAGGTTCTTGTCAACTCCCTCAAGATGTTCTTCTCCACATCTTCCGCTTTATAGATGTTCAATCTTTAGTTTCAGCTGGGCTAGTATGCCGGTAATTATCTATCATGATATTTCCTCATCTATCAACAAAGTTTGTTATTACCTTAACCATTCTCCTATTCAACTATTCAACTTAGTTTACTAGCCCCTCAAAGTTCACAAGCATTGCCAACGCTATTGCTTCCTTTAAGATAATGGTCGTTATGTAATCAATGTGAAGGTCGTGGAATGTAGCAGCAGAGGATGAATATCTGTGGCAGTTGCAGTATACAACATTTTTTGTTTGTTCTGATGACAATAGTAAATCCATTAATGATAAAGACAGTGAGGATGGCTTTGCTAGCAGTAGCACACCTCGTGTTGATTGGAAAGAGGAATTCAAGAAAGCATATGTAGGTGAGAATTGACACGGTCTCTAATTTCTGAACAATAATATATATGCCATTGAGTGATCAACTTAAATTTAAGAAAAATACTATCGTCCATGTAGCTTGTAGTTAGAAATATTTTTAGGGTATCAAAGGCAAATTAGTCTATAGCCAATGAATTTGTTAGTAGCAGTTGATTACAAATAAAGTTGGTGGGAGTTATTGTATTCCTTTATCTTTTTATCTTTCAGTTTCAGTATTATTCTACTTATCTGTGGTTTGTTACTTTTTTTATTCTTAATAAAACAAAAAGTTTAATCAATAGTTTTGATTTGATAATAATTATTTGTACTATGGTGTTTGGAATGATAGGTAATTCTTTGGGGAGAAACACATATGGAAGGGGATACTGCAAACACTGTGACACAATAGTTTCCTTTAGTACCTTGAGATGTCCGAATGATCATGGTAGAAATAAAAACACACAAATCAAGCCTCTGTCAATCAACCAGGTACTTTTTTCTATCCCTTTTTCCTAAGTTCATTTTCAGGGTCTTTTTGGTCAGCTTTCGCTCCTCTACTCTCTTATTCTGGTTACATGAATCTTTCTCTCTGACGGCAAGTGTAGTTTTTCTATTCTCTCCAGCACACTGAATTGAAATTGCTTTTGCTTATTTGAATGGTCACTTTTCATGAAACTGACTTCTTTTCAGGCTGATGGTAGTAGTATTGGCTTTTTTGCTATTGATTCTTTTAGAGGGGAAAAACACTTCCATGTTCTTTTGAAAGTATCTATAAAGATTTTGTAGCTGCTTTTTAAGTTTTTCAAGAATGCTTTTTTATGTATAGGGTTTTAAGTAAGATTGATTGGAGTCATTTCATTGTCTAAAAACTGATTCTGAATTGGCCTATCAGTTCAAGAAAAATTTAAACTAGATGCTGAAACCAGTGTTGGTTAAGTTGTCAAAAAATGTTCTTTAATTTTGCTTTTTTATAAATAAAGAAAAAACCATATTTGTTTAAAAGTTTCAATATTACCCACGATGTTTCATAAACATTTCAAAAATGACACTTGACTAGATATAGATATCTTTACCCGTAAGAATTTTATATGAAATTTGGTTGGGATGGGAATGATGTGACGAAGGTGACCAACAATGAAATTTGGATTGTTATATTGTTCCAAATCCTATTTTTTGGTTCATAATCTAAAAAGGGTGATTTTGAAAGGCTAATATTGCAACTTTTGAATGAATAAGAGTGTTTTGGACAACAGAATGGACCATCTGATGACCAAAATCCATAAATGAAACAATCAAATGATAAAGTAATCAAACAAACTGAAACATTTTTGGGTTTTGCTTTCGAACTGACGATGATGTGTCTCCTTCTTTTAGGTTGTTGAATATGTGTTAAATGGAGCGTCAGAATTGATTTATTCTTCAGATAGTGAAACTGATTCAGATGAAGATGTGATTTCTGAGTTTTGGGCTCTTCCAAAGTACTTAGGCAGCAGTGGAGCGAACTGATCCTATCCTAAAGGTGCAGATTTGAATCTTTTAACTTTTTGTCTTTGACGAGATAGTAATATTTTAACAACTGTAAAGAAGTTGCCTCGTCTATCTTGTTAACAGCTTAGATTGTAAATATATTTACCAATATCATTGAGAACGAATGAACTGGAGAGTATACAACAAATCAAGCCCACAAAAATTCTACTAAGGAAAGGGGGTTCGAGCAAAGCAAAATGTTACCTCTAAAATAACGAACTAAGAGATACGAATTATTTTTAGTTTT

Coding sequence (CDS)

ATGTCAAATCCATTAGAGAGATACCACAAACTTTGCCTGATGGATTTTCTGGCGAAGAGTTACAGCTACCCATTAGCTTGTAAGGAGCTAAGCTTCTTAATCAGAGGTGCTTTCATTAAACTTCCCAAGAATCTCCAATCTCTCATTTACGAACATATTATCACCGCCTTTCATCTCCTTCCAGAAATGCAGACGAGCTCTGCTGCTTCTGCTGCACGTCTCCTTGCTCGGGCTGTTGAAGCTGCTTTGCCTAAGCAAAAGAGAAATTCAGTGATTGTAGAATTTAAGAAAGCAATGGTTGTTCATAAGAGGCGTACTAAAGCACATCAGGAAGAAAAAGGTTCTTGTCAACTCCCTCAAGATGTTCTTCTCCACATCTTCCGCTTTATAGATGTTCAATCTTTAGTTTCAGCTGGGCTAGTATGCCGGTCGTGGAATGTAGCAGCAGAGGATGAATATCTGTGGCAGTTGCAGTATACAACATTTTTTGTTTGTTCTGATGACAATAGTAAATCCATTAATGATAAAGACAGTGAGGATGGCTTTGCTAGCAGTAGCACACCTCGTGTTGATTGGAAAGAGGAATTCAAGAAAGCATATGTAGGTAATTCTTTGGGGAGAAACACATATGGAAGGGGATACTGCAAACACTGTGACACAATAGTTTCCTTTAGTACCTTGAGATGTCCGAATGATCATGGTAGAAATAAAAACACACAAATCAAGCCTCTGTCAATCAACCAGGTTGTTGAATATGTGTTAAATGGAGCGTCAGAATTGATTTATTCTTCAGATAGTGAAACTGATTCAGATGAAGATGTGATTTCTGAGTTTTGGGCTCTTCCAAAGTACTTAGGCAGCAGTGGAGCGAACTGA

Protein sequence

MSNPLERYHKLCLMDFLAKSYSYPLACKELSFLIRGAFIKLPKNLQSLIYEHIITAFHLLPEMQTSSAASAARLLARAVEAALPKQKRNSVIVEFKKAMVVHKRRTKAHQEEKGSCQLPQDVLLHIFRFIDVQSLVSAGLVCRSWNVAAEDEYLWQLQYTTFFVCSDDNSKSINDKDSEDGFASSSTPRVDWKEEFKKAYVGNSLGRNTYGRGYCKHCDTIVSFSTLRCPNDHGRNKNTQIKPLSINQVVEYVLNGASELIYSSDSETDSDEDVISEFWALPKYLGSSGAN

Homology

[Close]

BLAST of Cucsat.G21286 vs. ExPASy Swiss-Prot
Match: Q9FLX3 (F-box protein At5g52880 OS=Arabidopsis thaliana OX=3702 GN=At5g52880 PE=2 SV=1)

HSP 1 Score: 154.1 bits (388), Expect = 2.0e-36
Identity = 100/231 (43.29%), Postives = 132/231 (57.14%), Query Frame = 0


Query: 1   MQTSSAASAARLLARAVEAALPKQKRNSVIVEFKKAMVVHKRRTKAHQEEKGSC-QLPQD 60
           + TS+A SAA LL ++VEA LPKQK+N  IVEFK+A V  KRR+K  +EE      LPQD
Sbjct: 59  INTSAAVSAANLLLKSVEAVLPKQKKNLAIVEFKQAKVALKRRSKNREEEDIDIPSLPQD 118

Query: 61  VLLHIFRFIDVQSLVSAGLVCRSWNVAAEDEYLWQLQYTTFFVCSDDNSKSINDKDSEDG 120
           +L+HIF F+++ SLVS+  V RSWN A  +  LWQ Q+   F     N K +    S+  
Sbjct: 119 ILIHIFSFLEISSLVSSAQVSRSWNQATHENSLWQSQFDLHF-----NHKVLIRMQSD-- 178

Query: 121 FASSSTPRVDWKEEFKKAYV-GNSLGRNTYGRGYCKHCDTIVSFSTLRCPNDHGRNK--N 180
                   +DW+E FKKAY+  NS      GRGYC +CD+IV    LRC N   R K  N
Sbjct: 179 --------IDWREAFKKAYIAANSSEALRSGRGYCSYCDSIVWHENLRCLNKQCRLKSGN 238

Query: 181 TQIKPLSINQVVEYVLNGASELIYSSDSETDSDEDVI-SEFWAL---PKYL 224
             +  ++ +QVV Y+L      I SSD E++SD++      W L   P YL
Sbjct: 239 KPLDLITTHQVVNYLLG-----IESSDDESESDDEAFPGRLWKLSYVPDYL 269

[Close]

BLAST of Cucsat.G21286 vs. ExPASy Swiss-Prot
Match: Q969U6 (F-box/WD repeat-containing protein 5 OS=Homo sapiens OX=9606 GN=FBXW5 PE=1 SV=1)

HSP 1 Score: 48.9 bits (115), Expect = 8.8e-05
Identity = 24/90 (26.67%), Postives = 42/90 (46.67%), Query Frame = 0


Query: 49  EEKGSCQLPQDVLLHIFRFIDVQSLVSAGLVCRSWNVAAEDEYLWQLQYTTFFVCSDDNS 108
           +E G+  LP  ++  IF  +    +++AGLVCR W   + DE+LW+ Q+  ++  + D  
Sbjct: 2   DEGGTPLLPDSLVYQIFLSLGPADVLAAGLVCRQWQAVSRDEFLWREQFYRYYQVARD-- 61

Query: 109 KSINDKDSEDGFASSSTPRVDWKEEFKKAY 139
                              + W EEF++ Y
Sbjct: 62  ------------VPRHPAAMSWYEEFQRLY 77

[Close]

BLAST of Cucsat.G21286 vs. ExPASy Swiss-Prot
Match: Q2T9S7 (F-box only protein 7 OS=Bos taurus OX=9913 GN=FBXO7 PE=2 SV=1)

HSP 1 Score: 48.5 bits (114), Expect = 1.2e-04
Identity = 29/87 (33.33%), Postives = 42/87 (48.28%), Query Frame = 0


Query: 52  GSCQLPQDVLLHIFRFIDVQSLVSAGLVCRSWNVAAEDEYLWQLQYTTFFVCSDDNSKSI 111
           G   LP ++ L IFR +DV+S++S   VCR   + + D+ LW+  Y       D    SI
Sbjct: 330 GLVVLPLELKLRIFRLLDVRSVLSLSAVCRDLCITSNDQLLWRCLY-----LRDFRDGSI 389

Query: 112 NDKDSEDGFASSSTPRVDWKEEFKKAY 139
             +D+            DWKE +KK Y
Sbjct: 390 RGRDT------------DWKELYKKRY 399

[Close]

BLAST of Cucsat.G21286 vs. ExPASy Swiss-Prot
Match: Q9Y3I1 (F-box only protein 7 OS=Homo sapiens OX=9606 GN=FBXO7 PE=1 SV=1)

HSP 1 Score: 48.1 bits (113), Expect = 1.5e-04
Identity = 28/88 (31.82%), Postives = 42/88 (47.73%), Query Frame = 0


Query: 52  GSCQLPQDVLLHIFRFIDVQSLVSAGLVCRSWNVAAEDEYLWQLQYTTFFVCSDDNSKSI 111
           G   LP ++ L IFR +DV+S++S   VCR    A+ D  LW+  Y   F    DN+  +
Sbjct: 331 GLVVLPLELKLRIFRLLDVRSVLSLSAVCRDLFTASNDPLLWRFLYLRDF---RDNTVRV 390

Query: 112 NDKDSEDGFASSSTPRVDWKEEFKKAYV 140
            D               DWKE ++K ++
Sbjct: 391 QD--------------TDWKELYRKRHI 401

[Close]

BLAST of Cucsat.G21286 vs. ExPASy Swiss-Prot
Match: Q4KLI9 (F-box/WD repeat-containing protein 5 OS=Rattus norvegicus OX=10116 GN=Fbxw5 PE=2 SV=1)

HSP 1 Score: 48.1 bits (113), Expect = 1.5e-04
Identity = 24/90 (26.67%), Postives = 40/90 (44.44%), Query Frame = 0


Query: 49  EEKGSCQLPQDVLLHIFRFIDVQSLVSAGLVCRSWNVAAEDEYLWQLQYTTFFVCSDDNS 108
           +E G   LP  ++  IF  +    +++AGLVCR W   + DE+LW+ Q+  ++  + D  
Sbjct: 2   DEGGMPLLPDSLVYQIFLSLGPADVLAAGLVCRQWQAVSRDEFLWREQFYRYYQVARD-- 61

Query: 109 KSINDKDSEDGFASSSTPRVDWKEEFKKAY 139
                                W EEF++ Y
Sbjct: 62  ------------VPRHPAATSWYEEFRRLY 77

[Close]

BLAST of Cucsat.G21286 vs. NCBI nr
Match: XP_011654641.1 (F-box protein At5g52880 isoform X2 [Cucumis sativus])

HSP 1 Score: 460 bits (1183), Expect = 2.78e-163
Identity = 229/229 (100.00%), Postives = 229/229 (100.00%), Query Frame = 0


Query: 1   MQTSSAASAARLLARAVEAALPKQKRNSVIVEFKKAMVVHKRRTKAHQEEKGSCQLPQDV 60
           MQTSSAASAARLLARAVEAALPKQKRNSVIVEFKKAMVVHKRRTKAHQEEKGSCQLPQDV
Sbjct: 1   MQTSSAASAARLLARAVEAALPKQKRNSVIVEFKKAMVVHKRRTKAHQEEKGSCQLPQDV 60

Query: 61  LLHIFRFIDVQSLVSAGLVCRSWNVAAEDEYLWQLQYTTFFVCSDDNSKSINDKDSEDGF 120
           LLHIFRFIDVQSLVSAGLVCRSWNVAAEDEYLWQLQYTTFFVCSDDNSKSINDKDSEDGF
Sbjct: 61  LLHIFRFIDVQSLVSAGLVCRSWNVAAEDEYLWQLQYTTFFVCSDDNSKSINDKDSEDGF 120

Query: 121 ASSSTPRVDWKEEFKKAYVGNSLGRNTYGRGYCKHCDTIVSFSTLRCPNDHGRNKNTQIK 180
           ASSSTPRVDWKEEFKKAYVGNSLGRNTYGRGYCKHCDTIVSFSTLRCPNDHGRNKNTQIK
Sbjct: 121 ASSSTPRVDWKEEFKKAYVGNSLGRNTYGRGYCKHCDTIVSFSTLRCPNDHGRNKNTQIK 180

Query: 181 PLSINQVVEYVLNGASELIYSSDSETDSDEDVISEFWALPKYLGSSGAN 229
           PLSINQVVEYVLNGASELIYSSDSETDSDEDVISEFWALPKYLGSSGAN
Sbjct: 181 PLSINQVVEYVLNGASELIYSSDSETDSDEDVISEFWALPKYLGSSGAN 229

[Close]

BLAST of Cucsat.G21286 vs. NCBI nr
Match: XP_031740911.1 (F-box protein At5g52880 isoform X1 [Cucumis sativus] >KGN49912.1 hypothetical protein Csa_000019 [Cucumis sativus])

HSP 1 Score: 460 bits (1183), Expect = 2.63e-162
Identity = 229/229 (100.00%), Postives = 229/229 (100.00%), Query Frame = 0


Query: 1   MQTSSAASAARLLARAVEAALPKQKRNSVIVEFKKAMVVHKRRTKAHQEEKGSCQLPQDV 60
           MQTSSAASAARLLARAVEAALPKQKRNSVIVEFKKAMVVHKRRTKAHQEEKGSCQLPQDV
Sbjct: 63  MQTSSAASAARLLARAVEAALPKQKRNSVIVEFKKAMVVHKRRTKAHQEEKGSCQLPQDV 122

Query: 61  LLHIFRFIDVQSLVSAGLVCRSWNVAAEDEYLWQLQYTTFFVCSDDNSKSINDKDSEDGF 120
           LLHIFRFIDVQSLVSAGLVCRSWNVAAEDEYLWQLQYTTFFVCSDDNSKSINDKDSEDGF
Sbjct: 123 LLHIFRFIDVQSLVSAGLVCRSWNVAAEDEYLWQLQYTTFFVCSDDNSKSINDKDSEDGF 182

Query: 121 ASSSTPRVDWKEEFKKAYVGNSLGRNTYGRGYCKHCDTIVSFSTLRCPNDHGRNKNTQIK 180
           ASSSTPRVDWKEEFKKAYVGNSLGRNTYGRGYCKHCDTIVSFSTLRCPNDHGRNKNTQIK
Sbjct: 183 ASSSTPRVDWKEEFKKAYVGNSLGRNTYGRGYCKHCDTIVSFSTLRCPNDHGRNKNTQIK 242

Query: 181 PLSINQVVEYVLNGASELIYSSDSETDSDEDVISEFWALPKYLGSSGAN 229
           PLSINQVVEYVLNGASELIYSSDSETDSDEDVISEFWALPKYLGSSGAN
Sbjct: 243 PLSINQVVEYVLNGASELIYSSDSETDSDEDVISEFWALPKYLGSSGAN 291

[Close]

BLAST of Cucsat.G21286 vs. NCBI nr
Match: XP_008437546.1 (PREDICTED: F-box protein At5g52880 isoform X3 [Cucumis melo] >KAA0042586.1 F-box protein [Cucumis melo var. makuwa] >TYK05989.1 F-box protein [Cucumis melo var. makuwa])

HSP 1 Score: 424 bits (1090), Expect = 4.20e-149
Identity = 211/227 (92.95%), Postives = 217/227 (95.59%), Query Frame = 0


Query: 1   MQTSSAASAARLLARAVEAALPKQKRNSVIVEFKKAMVVHKRRTKAHQEEKGSCQLPQDV 60
           MQTSSAASAARLLA+AVEAALPKQKRNSVIVE+KKAMVVHKRR+KAHQEEKGSCQLPQDV
Sbjct: 1   MQTSSAASAARLLAQAVEAALPKQKRNSVIVEYKKAMVVHKRRSKAHQEEKGSCQLPQDV 60

Query: 61  LLHIFRFIDVQSLVSAGLVCRSWNVAAEDEYLWQLQYTTFFVCSDDNSKSINDKDSEDGF 120
           LLHIFRF+DVQSL SAGLVCRSWNVAA+DEYLWQLQYTTFF C DDNSK INDKDSED F
Sbjct: 61  LLHIFRFLDVQSLGSAGLVCRSWNVAADDEYLWQLQYTTFFGCPDDNSKPINDKDSEDDF 120

Query: 121 ASSSTPRVDWKEEFKKAYVGNSLGRNTYGRGYCKHCDTIVSFSTLRCPNDHGRNKNTQIK 180
           ASSSTP VDWKEEFKKAYVGNSLGRNT GRGYCKHCDTIVSFSTLRC NDHGRNKN QIK
Sbjct: 121 ASSSTPHVDWKEEFKKAYVGNSLGRNTCGRGYCKHCDTIVSFSTLRCTNDHGRNKNKQIK 180

Query: 181 PLSINQVVEYVLNGASELIYSSDSETDSDEDVISEFWALPKYLGSSG 227
           PLSINQVVEYVLNG+SELIYSSDSETDSDEDVISEFWALPKYLGS G
Sbjct: 181 PLSINQVVEYVLNGSSELIYSSDSETDSDEDVISEFWALPKYLGSRG 227

[Close]

BLAST of Cucsat.G21286 vs. NCBI nr
Match: XP_008437544.1 (PREDICTED: F-box protein At5g52880 isoform X1 [Cucumis melo])

HSP 1 Score: 424 bits (1090), Expect = 3.88e-148
Identity = 211/227 (92.95%), Postives = 217/227 (95.59%), Query Frame = 0


Query: 1   MQTSSAASAARLLARAVEAALPKQKRNSVIVEFKKAMVVHKRRTKAHQEEKGSCQLPQDV 60
           MQTSSAASAARLLA+AVEAALPKQKRNSVIVE+KKAMVVHKRR+KAHQEEKGSCQLPQDV
Sbjct: 63  MQTSSAASAARLLAQAVEAALPKQKRNSVIVEYKKAMVVHKRRSKAHQEEKGSCQLPQDV 122

Query: 61  LLHIFRFIDVQSLVSAGLVCRSWNVAAEDEYLWQLQYTTFFVCSDDNSKSINDKDSEDGF 120
           LLHIFRF+DVQSL SAGLVCRSWNVAA+DEYLWQLQYTTFF C DDNSK INDKDSED F
Sbjct: 123 LLHIFRFLDVQSLGSAGLVCRSWNVAADDEYLWQLQYTTFFGCPDDNSKPINDKDSEDDF 182

Query: 121 ASSSTPRVDWKEEFKKAYVGNSLGRNTYGRGYCKHCDTIVSFSTLRCPNDHGRNKNTQIK 180
           ASSSTP VDWKEEFKKAYVGNSLGRNT GRGYCKHCDTIVSFSTLRC NDHGRNKN QIK
Sbjct: 183 ASSSTPHVDWKEEFKKAYVGNSLGRNTCGRGYCKHCDTIVSFSTLRCTNDHGRNKNKQIK 242

Query: 181 PLSINQVVEYVLNGASELIYSSDSETDSDEDVISEFWALPKYLGSSG 227
           PLSINQVVEYVLNG+SELIYSSDSETDSDEDVISEFWALPKYLGS G
Sbjct: 243 PLSINQVVEYVLNGSSELIYSSDSETDSDEDVISEFWALPKYLGSRG 289

[Close]

BLAST of Cucsat.G21286 vs. NCBI nr
Match: XP_038874450.1 (F-box protein At5g52880 isoform X2 [Benincasa hispida])

HSP 1 Score: 385 bits (988), Expect = 1.37e-133
Identity = 195/229 (85.15%), Postives = 204/229 (89.08%), Query Frame = 0


Query: 1   MQTSSAASAARLLARAVEAALPKQKRNSVIVEFKKAMVVHKRRTKAHQEEKGSCQLPQDV 60
           MQTSSAASAA LLA+ VEAALPKQKRNS IVEFKKAMV HKRR+KAHQEEKGS QLPQDV
Sbjct: 1   MQTSSAASAAHLLAQGVEAALPKQKRNSAIVEFKKAMVAHKRRSKAHQEEKGSAQLPQDV 60

Query: 61  LLHIFRFIDVQSLVSAGLVCRSWNVAAEDEYLWQLQYTTFFVCSDDNSKSINDKDSEDGF 120
           LLHIFRF+DVQSLVSAGLVCRSWNVAA+DEYLWQLQYT FF CSDDNSK INDKDS D F
Sbjct: 61  LLHIFRFLDVQSLVSAGLVCRSWNVAADDEYLWQLQYTKFFGCSDDNSKPINDKDSVDDF 120

Query: 121 ASSSTPRVDWKEEFKKAYVGNSLGRNTYGRGYCKHCDTIVSFSTLRCPNDHGRNKNTQIK 180
           AS+    VDWKEEFK AY+ NSL RNT GRGYC+HCDTIVS STLRCPNDHGRNKN QIK
Sbjct: 121 ASAR--HVDWKEEFKSAYIVNSLRRNTNGRGYCRHCDTIVSSSTLRCPNDHGRNKNKQIK 180

Query: 181 PLSINQVVEYVLNGASELIYSSDSETDSDEDVISEFWALPKYLGSSGAN 229
           PLSINQVVEYVLNG++ELIYSSDSETDSDE VISEFWA PKYLGS   N
Sbjct: 181 PLSINQVVEYVLNGSTELIYSSDSETDSDEVVISEFWAFPKYLGSRRPN 227

[Close]

BLAST of Cucsat.G21286 vs. ExPASy TrEMBL
Match: A0A0A0KNE5 (F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G139890 PE=4 SV=1)

HSP 1 Score: 460 bits (1183), Expect = 1.28e-162
Identity = 229/229 (100.00%), Postives = 229/229 (100.00%), Query Frame = 0


Query: 1   MQTSSAASAARLLARAVEAALPKQKRNSVIVEFKKAMVVHKRRTKAHQEEKGSCQLPQDV 60
           MQTSSAASAARLLARAVEAALPKQKRNSVIVEFKKAMVVHKRRTKAHQEEKGSCQLPQDV
Sbjct: 63  MQTSSAASAARLLARAVEAALPKQKRNSVIVEFKKAMVVHKRRTKAHQEEKGSCQLPQDV 122

Query: 61  LLHIFRFIDVQSLVSAGLVCRSWNVAAEDEYLWQLQYTTFFVCSDDNSKSINDKDSEDGF 120
           LLHIFRFIDVQSLVSAGLVCRSWNVAAEDEYLWQLQYTTFFVCSDDNSKSINDKDSEDGF
Sbjct: 123 LLHIFRFIDVQSLVSAGLVCRSWNVAAEDEYLWQLQYTTFFVCSDDNSKSINDKDSEDGF 182

Query: 121 ASSSTPRVDWKEEFKKAYVGNSLGRNTYGRGYCKHCDTIVSFSTLRCPNDHGRNKNTQIK 180
           ASSSTPRVDWKEEFKKAYVGNSLGRNTYGRGYCKHCDTIVSFSTLRCPNDHGRNKNTQIK
Sbjct: 183 ASSSTPRVDWKEEFKKAYVGNSLGRNTYGRGYCKHCDTIVSFSTLRCPNDHGRNKNTQIK 242

Query: 181 PLSINQVVEYVLNGASELIYSSDSETDSDEDVISEFWALPKYLGSSGAN 229
           PLSINQVVEYVLNGASELIYSSDSETDSDEDVISEFWALPKYLGSSGAN
Sbjct: 243 PLSINQVVEYVLNGASELIYSSDSETDSDEDVISEFWALPKYLGSSGAN 291

[Close]

BLAST of Cucsat.G21286 vs. ExPASy TrEMBL
Match: A0A5A7TKV8 (F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold376G00850 PE=4 SV=1)

HSP 1 Score: 424 bits (1090), Expect = 2.03e-149
Identity = 211/227 (92.95%), Postives = 217/227 (95.59%), Query Frame = 0


Query: 1   MQTSSAASAARLLARAVEAALPKQKRNSVIVEFKKAMVVHKRRTKAHQEEKGSCQLPQDV 60
           MQTSSAASAARLLA+AVEAALPKQKRNSVIVE+KKAMVVHKRR+KAHQEEKGSCQLPQDV
Sbjct: 1   MQTSSAASAARLLAQAVEAALPKQKRNSVIVEYKKAMVVHKRRSKAHQEEKGSCQLPQDV 60

Query: 61  LLHIFRFIDVQSLVSAGLVCRSWNVAAEDEYLWQLQYTTFFVCSDDNSKSINDKDSEDGF 120
           LLHIFRF+DVQSL SAGLVCRSWNVAA+DEYLWQLQYTTFF C DDNSK INDKDSED F
Sbjct: 61  LLHIFRFLDVQSLGSAGLVCRSWNVAADDEYLWQLQYTTFFGCPDDNSKPINDKDSEDDF 120

Query: 121 ASSSTPRVDWKEEFKKAYVGNSLGRNTYGRGYCKHCDTIVSFSTLRCPNDHGRNKNTQIK 180
           ASSSTP VDWKEEFKKAYVGNSLGRNT GRGYCKHCDTIVSFSTLRC NDHGRNKN QIK
Sbjct: 121 ASSSTPHVDWKEEFKKAYVGNSLGRNTCGRGYCKHCDTIVSFSTLRCTNDHGRNKNKQIK 180

Query: 181 PLSINQVVEYVLNGASELIYSSDSETDSDEDVISEFWALPKYLGSSG 227
           PLSINQVVEYVLNG+SELIYSSDSETDSDEDVISEFWALPKYLGS G
Sbjct: 181 PLSINQVVEYVLNGSSELIYSSDSETDSDEDVISEFWALPKYLGSRG 227

[Close]

BLAST of Cucsat.G21286 vs. ExPASy TrEMBL
Match: A0A1S3AUE6 (F-box protein At5g52880 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103482926 PE=4 SV=1)

HSP 1 Score: 424 bits (1090), Expect = 2.03e-149
Identity = 211/227 (92.95%), Postives = 217/227 (95.59%), Query Frame = 0


Query: 1   MQTSSAASAARLLARAVEAALPKQKRNSVIVEFKKAMVVHKRRTKAHQEEKGSCQLPQDV 60
           MQTSSAASAARLLA+AVEAALPKQKRNSVIVE+KKAMVVHKRR+KAHQEEKGSCQLPQDV
Sbjct: 1   MQTSSAASAARLLAQAVEAALPKQKRNSVIVEYKKAMVVHKRRSKAHQEEKGSCQLPQDV 60

Query: 61  LLHIFRFIDVQSLVSAGLVCRSWNVAAEDEYLWQLQYTTFFVCSDDNSKSINDKDSEDGF 120
           LLHIFRF+DVQSL SAGLVCRSWNVAA+DEYLWQLQYTTFF C DDNSK INDKDSED F
Sbjct: 61  LLHIFRFLDVQSLGSAGLVCRSWNVAADDEYLWQLQYTTFFGCPDDNSKPINDKDSEDDF 120

Query: 121 ASSSTPRVDWKEEFKKAYVGNSLGRNTYGRGYCKHCDTIVSFSTLRCPNDHGRNKNTQIK 180
           ASSSTP VDWKEEFKKAYVGNSLGRNT GRGYCKHCDTIVSFSTLRC NDHGRNKN QIK
Sbjct: 121 ASSSTPHVDWKEEFKKAYVGNSLGRNTCGRGYCKHCDTIVSFSTLRCTNDHGRNKNKQIK 180

Query: 181 PLSINQVVEYVLNGASELIYSSDSETDSDEDVISEFWALPKYLGSSG 227
           PLSINQVVEYVLNG+SELIYSSDSETDSDEDVISEFWALPKYLGS G
Sbjct: 181 PLSINQVVEYVLNGSSELIYSSDSETDSDEDVISEFWALPKYLGSRG 227

[Close]

BLAST of Cucsat.G21286 vs. ExPASy TrEMBL
Match: A0A1S3AUV1 (F-box protein At5g52880 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103482926 PE=4 SV=1)

HSP 1 Score: 424 bits (1090), Expect = 1.88e-148
Identity = 211/227 (92.95%), Postives = 217/227 (95.59%), Query Frame = 0


Query: 1   MQTSSAASAARLLARAVEAALPKQKRNSVIVEFKKAMVVHKRRTKAHQEEKGSCQLPQDV 60
           MQTSSAASAARLLA+AVEAALPKQKRNSVIVE+KKAMVVHKRR+KAHQEEKGSCQLPQDV
Sbjct: 63  MQTSSAASAARLLAQAVEAALPKQKRNSVIVEYKKAMVVHKRRSKAHQEEKGSCQLPQDV 122

Query: 61  LLHIFRFIDVQSLVSAGLVCRSWNVAAEDEYLWQLQYTTFFVCSDDNSKSINDKDSEDGF 120
           LLHIFRF+DVQSL SAGLVCRSWNVAA+DEYLWQLQYTTFF C DDNSK INDKDSED F
Sbjct: 123 LLHIFRFLDVQSLGSAGLVCRSWNVAADDEYLWQLQYTTFFGCPDDNSKPINDKDSEDDF 182

Query: 121 ASSSTPRVDWKEEFKKAYVGNSLGRNTYGRGYCKHCDTIVSFSTLRCPNDHGRNKNTQIK 180
           ASSSTP VDWKEEFKKAYVGNSLGRNT GRGYCKHCDTIVSFSTLRC NDHGRNKN QIK
Sbjct: 183 ASSSTPHVDWKEEFKKAYVGNSLGRNTCGRGYCKHCDTIVSFSTLRCTNDHGRNKNKQIK 242

Query: 181 PLSINQVVEYVLNGASELIYSSDSETDSDEDVISEFWALPKYLGSSG 227
           PLSINQVVEYVLNG+SELIYSSDSETDSDEDVISEFWALPKYLGS G
Sbjct: 243 PLSINQVVEYVLNGSSELIYSSDSETDSDEDVISEFWALPKYLGSRG 289

[Close]

BLAST of Cucsat.G21286 vs. ExPASy TrEMBL
Match: A0A6J1IBY0 (F-box protein At5g52880 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111471558 PE=4 SV=1)

HSP 1 Score: 370 bits (949), Expect = 5.22e-128
Identity = 187/229 (81.66%), Postives = 199/229 (86.90%), Query Frame = 0


Query: 1   MQTSSAASAARLLARAVEAALPKQKRNSVIVEFKKAMVVHKRRTKAHQEEKGSCQLPQDV 60
           MQTSSA SAA LLA+ VEA+LPKQKRNS IVEFKKAMV HKRR+KA QE KGS QLPQDV
Sbjct: 1   MQTSSAVSAAHLLAQGVEASLPKQKRNSAIVEFKKAMVAHKRRSKARQEVKGSSQLPQDV 60

Query: 61  LLHIFRFIDVQSLVSAGLVCRSWNVAAEDEYLWQLQYTTFFVCSDDNSKSINDKDSEDGF 120
           LLHIFRF+D++SLVSAGLVCRSW+ AA+DEYLWQ QYTTFF CSD+    IND+DS DG 
Sbjct: 61  LLHIFRFLDIESLVSAGLVCRSWSAAADDEYLWQFQYTTFFGCSDE---PINDEDSVDGL 120

Query: 121 ASSSTPRVDWKEEFKKAYVGNSLGRNTYGRGYCKHCDTIVSFSTLRCPNDHGRNKNTQIK 180
           AS  TP VDWKE FK+AYVGNSL RN YGRGYCKHCDTIVSFSTLRCPNDHGRNKN QIK
Sbjct: 121 AS--TPHVDWKEAFKRAYVGNSLWRNRYGRGYCKHCDTIVSFSTLRCPNDHGRNKNRQIK 180

Query: 181 PLSINQVVEYVLNGASELIYSSDSETDSDEDVISEFWALPKYLGSSGAN 229
           PLSINQVVEYVLNG SELIYSSDS+TDSDE VISEFWALPKYLG    N
Sbjct: 181 PLSINQVVEYVLNGISELIYSSDSDTDSDEVVISEFWALPKYLGRRRPN 224

The following BLAST results are available for this feature:

BLAST of Cucsat.G21286 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FLX3	2.0e-36	43.29	F-box protein At5g52880 OS=Arabidopsis thaliana OX=3702 GN=At5g52880 PE=2 SV=1	[more]
Q969U6	8.8e-05	26.67	F-box/WD repeat-containing protein 5 OS=Homo sapiens OX=9606 GN=FBXW5 PE=1 SV=1	[more]
Q2T9S7	1.2e-04	33.33	F-box only protein 7 OS=Bos taurus OX=9913 GN=FBXO7 PE=2 SV=1	[more]
Q9Y3I1	1.5e-04	31.82	F-box only protein 7 OS=Homo sapiens OX=9606 GN=FBXO7 PE=1 SV=1	[more]
Q4KLI9	1.5e-04	26.67	F-box/WD repeat-containing protein 5 OS=Rattus norvegicus OX=10116 GN=Fbxw5 PE=2...	[more]

BLAST of Cucsat.G21286 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011654641.1	2.78e-163	100.00	F-box protein At5g52880 isoform X2 [Cucumis sativus]	[more]
XP_031740911.1	2.63e-162	100.00	F-box protein At5g52880 isoform X1 [Cucumis sativus] >KGN49912.1 hypothetical pr...	[more]
XP_008437546.1	4.20e-149	92.95	PREDICTED: F-box protein At5g52880 isoform X3 [Cucumis melo] >KAA0042586.1 F-box...	[more]
XP_008437544.1	3.88e-148	92.95	PREDICTED: F-box protein At5g52880 isoform X1 [Cucumis melo]	[more]
XP_038874450.1	1.37e-133	85.15	F-box protein At5g52880 isoform X2 [Benincasa hispida]	[more]

BLAST of Cucsat.G21286 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KNE5	1.28e-162	100.00	F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G139890 PE=4 ...	[more]
A0A5A7TKV8	2.03e-149	92.95	F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold376G00850 ...	[more]
A0A1S3AUE6	2.03e-149	92.95	F-box protein At5g52880 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103482926 PE=4 ...	[more]
A0A1S3AUV1	1.88e-148	92.95	F-box protein At5g52880 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103482926 PE=4 ...	[more]
A0A6J1IBY0	5.22e-128	81.66	F-box protein At5g52880 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111471558 P...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001810	F-box domain	SMART	SM00256	fbox_2	coord: 56..96 e-value: 1.5E-7 score: 41.1
IPR001810	F-box domain	PFAM	PF12937	F-box-like	coord: 54..97 e-value: 2.4E-13 score: 49.7
IPR001810	F-box domain	PROSITE	PS50181	FBOX	coord: 50..96 score: 10.981155
None	No IPR available	GENE3D	1.20.1280.50		coord: 37..143 e-value: 2.2E-14 score: 55.1
None	No IPR available	PANTHER	PTHR47744	OS05G0526300 PROTEIN	coord: 1..223
IPR036047	F-box-like domain superfamily	SUPERFAMILY	81383	F-box domain	coord: 54..137

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsat.G21286.T1	Cucsat.G21286.T1	mRNA
Cucsat.G21286.T2	Cucsat.G21286.T2	mRNA
Cucsat.G21286.T3	Cucsat.G21286.T3	mRNA
Cucsat.G21286.T4	Cucsat.G21286.T4	mRNA
Cucsat.G21286.T7	Cucsat.G21286.T7	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding