Cucsat.G16578.T7 (mRNA) Cucumber (B10) v3

Overview


Name	Cucsat.G16578.T7
Type	mRNA
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha
Location	ctg24: 953362 .. 957998 (+)
RNA-Seq Expression	Cucsat.G16578.T7
Synteny	Cucsat.G16578.T7

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

TATAGAGAAGTAGAAGAATCACTAATCGTTTCTTTGTACCGTAAGCTGTGTGGTCTCGGAGGGTTGAACTACAATGGGAAGTGGAAGCACAGTCTTACTCAGGAAACTCTTCACGATCCCTAATTTCCTTCCACTCAATCTCTGATTCTTCATCTTTCCTCAACTTTTCTGGTTCCGATTGCGTGTTTTCCCAGCAATATCCATGGATTTCGATGACACCTTACCCATCAGCGAGCGACGAGAGTGGTGCGACGTAACTCCGCTTCCGCAGGACGATGGTCCCAATCCGATTGTGGCGATTGCCTACAAAGAAGACTTCTCTGAGCTCATGGGTTACTTCCGAGCTGTTTATCGAGCAGATGAGCGTTCTCCTCGTTCTCTCCATCTCACTGCGGAAGCTATTGCTATGAATCCTGGCAATTACACTGTAATTTCTTTTACCCTCTTTTTTATTTTTGTGTTTGATGCCTGATTGGATTTATGTTTGGAGTTGGACAAGGACTGGAGTGGATGAGAGTGACTGATGATCTGCTTCGTTTGGGGTCGGGCAATTTCTAAAATTCCAACTTGATGTTTCCTTGACTTGAACTAGCTATTGCAATGTTTATACGGAAAAGGGAGTGTGTTTAGTTATTCAATATTTTGATAATGTATACTACAACTAATGCGTGTTCTTCTCATGCTTCTTAACCTTGAGGCCTTGGTTGGAGTGTTTTTTTATTCTTAGGAGAATCAAAGATTGTGTATTTTGGGCTTTTATGTTTGCTTACTTGTTTATTTGAAAGGATTTTGTACTATTGTTTGGCTAGTTTAGAGAGATTCAAAGAGCCGAAGCATCCCAACTTTTTTGCCATTTCCCAAAGCCAAATGATTTTTACAGGAAAACCTTCCAATTTGCCAAAAGACCAGTTAAGCTAGAATTTGTTAAAGGAGAGAACAAATATTTGTACCAAGTTGAAGCTTGAATAAAACAAACTCATAGATCCTTTCCACAGAGAGGGATTTGCTGTTGGATATTTGGTTGTTCCTTCCGTCCGCAGGAAGCATAAAAGCTCTAACAAGCTGTAACTTGAGAAACTCCGTCTCATCATGTTGAAACGTTTCTTTTCCTCGGATTTGATTTAACAGAAGTTGACTTTGTAGTGTATAAGATGAGTTTGAGTTCCTGAGTGGCTTAGCAAGGATGTGATATCTAGTACTAGTTCTACCTTTTGAACTAATATTTTTAGTTACTTTATTTGTTTCTCTTAGATAGGAGATAATTCCATTGATGATATGAAATGTTACAAAAAAAAAAAAAAAAAAGACCGTCCTGTGAAGTTACAAAAAAATTTCTACAGTTTATCAATATTATGGTTGCAAAAAGGCAAAAGATTTTACAGCAATAAGAATCCGTAAAGATGGTGTATCCAATAATTCCTCTGGGCTTCTTTCTTTGTCATGAAAAATCCTTTGATGTCAATTAATTATTACATTTAGTGGTGCAGCACTTGTCAATTCAGCCTTATGAACTAAATTCAAACTTCAATTTATTTTATTAAAAGCCTGTAGACTTTTTAATTCAACCTAAATACAGATCATTCTAAAACCTACGCTTGTTGTAATGTGCTTTGATATAAGGTCGTTCATTTACTTTTACCTTTATAAGTCAGTAAATGAAGTTCTTTCTTCTATGTAGGTTTGGCATTTCAGGCGTTTGATACTCGAGGCTCTTAATGTTGATTTGCATGATGAACTAAATTTCCTTGACAACATTGCTGAGTCTAACACCAAAAACTATCAGATATGGTCAGCCTAATGTTTGAATTAATGAGCTTGAAGTTTTTCTTTTCTTTTCTAAATTTTAATCTTTTGATTGATATTAAAGATGTGTCTATAATAAAGAAGACTGTTTGTTTACTGTTTATTCATACTTAATTTATGAAAGCACTGTAGCTTTTTCCTTATGTTAAGTTATCTCTTATCAGTTTATCATCAAAACAAATTTAATATTTGAGCTTTGGCAGATTGGAGCATGTGCTATTCTGTGGGGTTTTTAGATGTGAGGTGAAAGAAAGAATAGAATCTTTAGGGGAGAGAGATTTCATCCCGTGATGTTTGGTCCCTTGTTAGATTCTCAGTTTTCCTTTGGGCATCAGTGTTTAGGCATTTTTGTAATCATACACTAGGTGTCATTTACATGATTGAAGCCCCTTTAATGGGCTGTTTGGAAGATAGTAATGGGATGAGTCTATATTGTATGTAATCTAAAATTCACGTTAGGATTGTGTGTTTTAGGGTTGATTTGTAATACTAAATTCATTTTGTTCCAACAATTCTCAACCCAATCCACTTTTCTACTGTTTTGACGCTTCACAATCCCATTTTTGTTCTATCCATGATTCCTCAAGCATCCCAACACCCATCAATTCCCAGTAATCTAATTACATTCCAACTTTCCAAATAGCTTCTAGTGTAGTTGGTTCCCTTTTTATGGGCTTCTCATATTTTGTATGAGTGGCAGTGGCAACAAACAGTAACGAAGAGGAGGGACTATCATTATGGAAAGTTCTTTGTGGAAAGGCAGAAGTCAGGGTAGACTGCTAAGAAAGCTTGGAAAGGTTTTACCCTCATGATGAATGGTCAAGATTTTCAAATGTCGTCGGACATTATATTTATGATCTACTTGTTCTTTTCATCCTCTCTTCCGTCAGAATAGGCCTGCATGAATCTTTATGAAATATCTTTGCAGGCATCATAGGAGATGGGTTGCTCAGAAACTGGGAACTGATGCTGCAAACAAAGAGCTTGAATTCACCAGAAAGATTATCTCCCTTGATTCCAAAAATTATCATGCTTGGTCTCATAGACAGGTTTGATCTCCAATCTACTACCATTTGTTATTGTATTTTAATCTATGCAATGTAATTTGTTTCCCATCCAGACCTTAGTGACACGGTTTATTTAATTATAATGCAGTGGGTTCTTCAGGCACTGGGTGGATGGGAAGATGAACTTGACTATTGTCACGAGCTTCTAAAGGAAGATGTTTTTAATAATTCTGCATGGAATCAGGTTAGCGCATACTTCATATCTGCTCCTTGCTCCTTGAGTTTAATCCAAATAGCTGGAAAAGGAAGTATTTTTTTGATGTGGAGGCGCTTCATTAGGAATATGTGCAGAGTTGGGTGGTTAAAAATAGTGTTTTTGGCATAAGATGAAGATAAGTTTGTGAAAGTTAGGTGGTTCAAATTTCCAAATATAGTAACTTAGGCAGAATTCTTTTCCCCTTTCTTTTTAATAGTTATTTAGAAATAATAACCTTTTCATTGAATGGTGAAATCTTTTTATTTATTATTTTTATTTTAAAAAAGAAATCAAGCTTTCATTGAGCAAAGTAAAAGGCGTTAGCTTGCTCCAAGATCTAAGAGAAAAAAAGTCAATAAAAAGATGTTAACTCATGCTTCACATTATTGTAGAGGCGACTGTTTCTTTCAATTCTTCTAAAAAAGGGACAAACACATATTTCAAGAAACAAATTTATCTGGAGCGACAGAGAAACCCTGGTGTCAATGACTTCACTGTCTTGTTTCTACTAAAAATTTTGTGTGAGATATTGAATGGAGGAGTCAGGGATATAACTAAAATCTTTCCGCTGAACTTGTAATTACTTTATTATTTTCATCCTCTAGTTTTGGTAAGTATCTTGAATTCTTTCTGACATGGTTGGCGTCTAATTTCTGTTTGACACATAATCTTCTTTCATAAGAAATCTTAAATAACGATATACCTCAAGTTAATCTCTTTCAGAGTATTAGTTTAATCCTTCTTGCACTTTTTTGTTTGTGGTAGAGATACTTTGTCATAACCAGATCTCCCTTACTGGGTGGCCTAAAATCCATGCGAGAATCTGAAGTGAATTATACTGTTGAAGCCATTCTTGCTCATCCTGAAAATGAGAGTTCTTGGAGATATCTGCGCGGACTTTATGCCGGTGACACACAGTCATGGATTATTGCTCCTCAAGTTTCTTCAGTCTGTTTGAAAGTTTTGGGAAGTAGAATTAACTTTGTGTTTGCTTTGAGCACCCTGTTGGATCTTCTCTCCCATGGTTTCCCGTCAACCCAAGCGTTCAGAGATGCTGTTGATGCTTTGAGGGTACCAGACGACAATCAAACAGATTCCAACCTAGCCAAAACTGCATGTTTAATCTTGGAACGTGTTGATCCAATCCGAGTTAACTATTGGCTCTGGCAGAAGAGTAAGCTTCCTCAGTAACAAGTTCAATTCATCAGCTCATTTTAGCCATCCTCAAGGTTCATTTTAATGTTCACTGTTGAGAATTGGATTCAACATCCACAGTTTTTTGGTGACCAAATCTTGAGAATAGTACTCTGCCACTAAAGATAACTCTCTAATTCAACGTGATTGACAAAAGAATTAAAAAGAAAAAAGAAAAACTCTTTTGCTAGATGGCAAGCCACTGTCTATTTCGCTTGTATACTGAAAACAGGTAATATCAAACCAAGTTTTGTACATTCAATATCTTTATAATTCTTTCGCAATTTGTACTTGTGTATATTATGCTGCTATATACCCCGAGAATGATTAAATTAATATTAATATCGGGTATGATATATTTGATATTATGACTTTTT

Coding sequence (CDS)

ATGCGAGAATCTGAAGTGAATTATACTGTTGAAGCCATTCTTGCTCATCCTGAAAATGAGAGTTCTTGGAGATATCTGCGCGGACTTTATGCCGGTGACACACAGTCATGGATTATTGCTCCTCAAGTTTCTTCAGTCTGTTTGAAAGTTTTGGGAAGTAGAATTAACTTTGTGTTTGCTTTGAGCACCCTGTTGGATCTTCTCTCCCATGGTTTCCCGTCAACCCAAGCGTTCAGAGATGCTGTTGATGCTTTGAGGGTACCAGACGACAATCAAACAGATTCCAACCTAGCCAAAACTGCATGTTTAATCTTGGAACGTGTTGATCCAATCCGAGTTAACTATTGGCTCTGGCAGAAGAGTAAGCTTCCTCAGTAA

Protein sequence

MRESEVNYTVEAILAHPENESSWRYLRGLYAGDTQSWIIAPQVSSVCLKVLGSRINFVFALSTLLDLLSHGFPSTQAFRDAVDALRVPDDNQTDSNLAKTACLILERVDPIRVNYWLWQKSKLPQ

Homology

[Close]

BLAST of Cucsat.G16578.T7 vs. ExPASy Swiss-Prot
Match: O24304 (Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha OS=Pisum sativum OX=3888 GN=FTA PE=1 SV=1)

HSP 1 Score: 151.0 bits (380), Expect = 9.0e-36
Identity = 72/125 (57.60%), Postives = 99/125 (79.20%), Query Frame = 0


Query: 1   MRESEVNYTVEAILAHPENESSWRYLRGLYAGDTQSWIIAPQVSSVCLKVLGSRINFVFA 60
           MRESEV +TVEAI+++PENESSWRYLRGL+  ++  ++   QVSS+CLK+L ++ N++FA
Sbjct: 207 MRESEVLFTVEAIISYPENESSWRYLRGLFKDESTLYVNDAQVSSLCLKILKTKSNYLFA 266

Query: 61  LSTLLDLLSHGFPSTQAFRDAVDALRVPDDNQTDSNLAKTACLILERVDPIRVNYWLWQK 120
           LSTLLDL +      + FRDA++ALR+    + DS++A T C ILE+VDPIRVNYW+W+K
Sbjct: 267 LSTLLDLSASVIQPNEDFRDAIEALRLQILIKQDSDIAITICSILEQVDPIRVNYWVWRK 326

Query: 121 SKLPQ 126
           S+LPQ
Sbjct: 327 SRLPQ 331

[Close]

BLAST of Cucsat.G16578.T7 vs. ExPASy Swiss-Prot
Match: Q9LX33 (Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha OS=Arabidopsis thaliana OX=3702 GN=FTA PE=1 SV=2)

HSP 1 Score: 135.6 bits (340), Expect = 3.9e-31
Identity = 70/124 (56.45%), Postives = 85/124 (68.55%), Query Frame = 0


Query: 1   MRESEVNYTVEAILAHPENESSWRYLRGLYAGDTQSWIIAPQVSSVCLKVLGSRINF-VF 60
           MRESEV+YT++AIL +P NESSWRYL+ LY  D +SWI  P VSSVCL VL     F  F
Sbjct: 201 MRESEVSYTIKAILTNPANESSWRYLKALYKDDKESWISDPSVSSVCLNVLSRTDCFHGF 260

Query: 61  ALSTLLDLLSHGFPSTQAFRDAVDALRVPDDNQTDSNLAKTACLILERVDPIRVNYWLWQ 120
           ALSTLLDLL  G   T   +D+V AL    + + ++NLA   C IL RVDP+R NYW W+
Sbjct: 261 ALSTLLDLLCDGLRPTNEHKDSVRALA---NEEPETNLANLVCTILGRVDPVRANYWAWR 320

Query: 121 KSKL 124
           KSK+
Sbjct: 321 KSKI 321

[Close]

BLAST of Cucsat.G16578.T7 vs. ExPASy Swiss-Prot
Match: P93227 (Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha OS=Solanum lycopersicum OX=4081 GN=FTA PE=1 SV=1)

HSP 1 Score: 123.2 bits (308), Expect = 2.0e-27
Identity = 67/121 (55.37%), Postives = 76/121 (62.81%), Query Frame = 0


Query: 1   MRESEVNYTVEAILAHPENESSWRYLRGLYAGDTQSWIIAPQVSSVCLKVLGSRINFVFA 60
           MRE EVNYTV+AI A PENES WRYLRGLY  DTQS +   QV+SV   VL S+ + V A
Sbjct: 205 MRELEVNYTVQAIRASPENESPWRYLRGLYKNDTQSLVQDSQVASVLWDVLTSQNSHVHA 264

Query: 61  LSTLLDLLSHGFPSTQAFRDAVDALRVPDDNQTDSNLAKTACLILERVDPIRVNYWLWQK 120
           L  LLDLL H    +Q  + AVD L  P     D  L K  C ILE  DP+RV YW W+K
Sbjct: 265 LRFLLDLLCHDLEPSQELKSAVDVL-TPQSCSPDLALTKKICSILEHADPMRVKYWNWRK 324

Query: 121 S 122
           S
Sbjct: 325 S 324

[Close]

BLAST of Cucsat.G16578.T7 vs. ExPASy Swiss-Prot
Match: Q54RT9 (Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha OS=Dictyostelium discoideum OX=44689 GN=fntA PE=3 SV=1)

HSP 1 Score: 44.7 bits (104), Expect = 9.1e-04
Identity = 33/114 (28.95%), Postives = 48/114 (42.11%), Query Frame = 0


Query: 3   ESEVNYTVEAILAHPENESSWRYLRGLYAGDTQSWIIAPQVSSVCLKVLGSRINFVFALS 62
           E EV +    I   P NES W YL+GL+ G   S  I P +  + L++    I      S
Sbjct: 212 EREVEFAFNHIRHSPNNESPWSYLKGLFKGQKIS-TIYPSLLDILLEMKSKYIGCSHVNS 271

Query: 63  TLLDLLSHGFPSTQAFRDAVDALRVPDDNQTDSNLAKTACLILERVDPIRVNYW 117
            +LD+                  ++  +N    N+ K   L+ E +DPI  NYW
Sbjct: 272 IILDIYQE------------QNTKISLENSL--NICK---LLSETIDPIHKNYW 307

[Close]

BLAST of Cucsat.G16578.T7 vs. NCBI nr
Match: XP_004152103.3 (protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha [Cucumis sativus] >KAE8649109.1 hypothetical protein Csa_015204 [Cucumis sativus])

HSP 1 Score: 255 bits (651), Expect = 1.01e-82
Identity = 125/125 (100.00%), Postives = 125/125 (100.00%), Query Frame = 0


Query: 1   MRESEVNYTVEAILAHPENESSWRYLRGLYAGDTQSWIIAPQVSSVCLKVLGSRINFVFA 60
           MRESEVNYTVEAILAHPENESSWRYLRGLYAGDTQSWIIAPQVSSVCLKVLGSRINFVFA
Sbjct: 201 MRESEVNYTVEAILAHPENESSWRYLRGLYAGDTQSWIIAPQVSSVCLKVLGSRINFVFA 260

Query: 61  LSTLLDLLSHGFPSTQAFRDAVDALRVPDDNQTDSNLAKTACLILERVDPIRVNYWLWQK 120
           LSTLLDLLSHGFPSTQAFRDAVDALRVPDDNQTDSNLAKTACLILERVDPIRVNYWLWQK
Sbjct: 261 LSTLLDLLSHGFPSTQAFRDAVDALRVPDDNQTDSNLAKTACLILERVDPIRVNYWLWQK 320

Query: 121 SKLPQ 125
           SKLPQ
Sbjct: 321 SKLPQ 325

[Close]

BLAST of Cucsat.G16578.T7 vs. NCBI nr
Match: XP_008453985.1 (PREDICTED: protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha [Cucumis melo] >KAA0044591.1 protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha [Cucumis melo var. makuwa])

HSP 1 Score: 243 bits (620), Expect = 5.04e-78
Identity = 119/125 (95.20%), Postives = 121/125 (96.80%), Query Frame = 0


Query: 1   MRESEVNYTVEAILAHPENESSWRYLRGLYAGDTQSWIIAPQVSSVCLKVLGSRINFVFA 60
           MRESEVNYTVEAILAHPENESSWRYLRGLYAGDTQSWIIA QVSSVCLKVL S+INF+FA
Sbjct: 201 MRESEVNYTVEAILAHPENESSWRYLRGLYAGDTQSWIIASQVSSVCLKVLKSKINFLFA 260

Query: 61  LSTLLDLLSHGFPSTQAFRDAVDALRVPDDNQTDSNLAKTACLILERVDPIRVNYWLWQK 120
           LSTLLDLLSHGFPSTQ FRDAVDALRVPDDNQTDSNLAKT CLILERVDPIRVNYWLWQK
Sbjct: 261 LSTLLDLLSHGFPSTQEFRDAVDALRVPDDNQTDSNLAKTVCLILERVDPIRVNYWLWQK 320

Query: 121 SKLPQ 125
           SKLPQ
Sbjct: 321 SKLPQ 325

[Close]

BLAST of Cucsat.G16578.T7 vs. NCBI nr
Match: TYK16993.1 (protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha [Cucumis melo var. makuwa])

HSP 1 Score: 241 bits (615), Expect = 7.73e-77
Identity = 118/124 (95.16%), Postives = 120/124 (96.77%), Query Frame = 0


Query: 1   MRESEVNYTVEAILAHPENESSWRYLRGLYAGDTQSWIIAPQVSSVCLKVLGSRINFVFA 60
           MRESEVNYTVEAILAHPENESSWRYLRGLYAGDTQSWIIA QVSSVCLKVL S+INF+FA
Sbjct: 201 MRESEVNYTVEAILAHPENESSWRYLRGLYAGDTQSWIIASQVSSVCLKVLKSKINFLFA 260

Query: 61  LSTLLDLLSHGFPSTQAFRDAVDALRVPDDNQTDSNLAKTACLILERVDPIRVNYWLWQK 120
           LSTLLDLLSHGFPSTQ FRDAVDALRVPDDNQTDSNLAKT CLILERVDPIRVNYWLWQK
Sbjct: 261 LSTLLDLLSHGFPSTQEFRDAVDALRVPDDNQTDSNLAKTVCLILERVDPIRVNYWLWQK 320

Query: 121 SKLP 124
           SKLP
Sbjct: 321 SKLP 324

[Close]

BLAST of Cucsat.G16578.T7 vs. NCBI nr
Match: XP_038900826.1 (protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha [Benincasa hispida])

HSP 1 Score: 232 bits (592), Expect = 8.77e-74
Identity = 112/125 (89.60%), Postives = 118/125 (94.40%), Query Frame = 0


Query: 1   MRESEVNYTVEAILAHPENESSWRYLRGLYAGDTQSWIIAPQVSSVCLKVLGSRINFVFA 60
           MRESEV+YTV+ ILAHPENESSWRYLRGL+AGDTQSWIIAPQVSSVCLKVL S+ NFVFA
Sbjct: 201 MRESEVSYTVDTILAHPENESSWRYLRGLHAGDTQSWIIAPQVSSVCLKVLSSKSNFVFA 260

Query: 61  LSTLLDLLSHGFPSTQAFRDAVDALRVPDDNQTDSNLAKTACLILERVDPIRVNYWLWQK 120
           LSTLLDLL HGF S+Q FRDAVDALR+PDDNQTDSNLAKT CLILERVDPIRVNYWLWQK
Sbjct: 261 LSTLLDLLCHGFQSSQEFRDAVDALRIPDDNQTDSNLAKTVCLILERVDPIRVNYWLWQK 320

Query: 121 SKLPQ 125
           SKLPQ
Sbjct: 321 SKLPQ 325

[Close]

BLAST of Cucsat.G16578.T7 vs. NCBI nr
Match: XP_022145198.1 (protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha [Momordica charantia])

HSP 1 Score: 216 bits (549), Expect = 2.73e-67
Identity = 106/125 (84.80%), Postives = 114/125 (91.20%), Query Frame = 0


Query: 1   MRESEVNYTVEAILAHPENESSWRYLRGLYAGDTQSWIIAPQVSSVCLKVLGSRINFVFA 60
           MRESEVNYTVEAILAHP+NESSWRYLRGLY+GDT SWI APQVSSVCLKVL  + N+VFA
Sbjct: 201 MRESEVNYTVEAILAHPKNESSWRYLRGLYSGDTDSWITAPQVSSVCLKVLKGKSNYVFA 260

Query: 61  LSTLLDLLSHGFPSTQAFRDAVDALRVPDDNQTDSNLAKTACLILERVDPIRVNYWLWQK 120
           LSTLLDLL HGF STQ FRDAVDALR+PD + +DS+LAKT CLILERVDPIRVNYWLWQK
Sbjct: 261 LSTLLDLLCHGFQSTQEFRDAVDALRIPD-HPSDSDLAKTVCLILERVDPIRVNYWLWQK 320

Query: 121 SKLPQ 125
           SKLPQ
Sbjct: 321 SKLPQ 324

[Close]

BLAST of Cucsat.G16578.T7 vs. ExPASy TrEMBL
Match: A0A0A0KW41 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G015150 PE=3 SV=1)

HSP 1 Score: 255 bits (651), Expect = 2.23e-83
Identity = 125/125 (100.00%), Postives = 125/125 (100.00%), Query Frame = 0


Query: 1   MRESEVNYTVEAILAHPENESSWRYLRGLYAGDTQSWIIAPQVSSVCLKVLGSRINFVFA 60
           MRESEVNYTVEAILAHPENESSWRYLRGLYAGDTQSWIIAPQVSSVCLKVLGSRINFVFA
Sbjct: 176 MRESEVNYTVEAILAHPENESSWRYLRGLYAGDTQSWIIAPQVSSVCLKVLGSRINFVFA 235

Query: 61  LSTLLDLLSHGFPSTQAFRDAVDALRVPDDNQTDSNLAKTACLILERVDPIRVNYWLWQK 120
           LSTLLDLLSHGFPSTQAFRDAVDALRVPDDNQTDSNLAKTACLILERVDPIRVNYWLWQK
Sbjct: 236 LSTLLDLLSHGFPSTQAFRDAVDALRVPDDNQTDSNLAKTACLILERVDPIRVNYWLWQK 295

Query: 121 SKLPQ 125
           SKLPQ
Sbjct: 296 SKLPQ 300

[Close]

BLAST of Cucsat.G16578.T7 vs. ExPASy TrEMBL
Match: A0A5A7TSR3 (Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold46G003410 PE=3 SV=1)

HSP 1 Score: 243 bits (620), Expect = 2.44e-78
Identity = 119/125 (95.20%), Postives = 121/125 (96.80%), Query Frame = 0


Query: 1   MRESEVNYTVEAILAHPENESSWRYLRGLYAGDTQSWIIAPQVSSVCLKVLGSRINFVFA 60
           MRESEVNYTVEAILAHPENESSWRYLRGLYAGDTQSWIIA QVSSVCLKVL S+INF+FA
Sbjct: 201 MRESEVNYTVEAILAHPENESSWRYLRGLYAGDTQSWIIASQVSSVCLKVLKSKINFLFA 260

Query: 61  LSTLLDLLSHGFPSTQAFRDAVDALRVPDDNQTDSNLAKTACLILERVDPIRVNYWLWQK 120
           LSTLLDLLSHGFPSTQ FRDAVDALRVPDDNQTDSNLAKT CLILERVDPIRVNYWLWQK
Sbjct: 261 LSTLLDLLSHGFPSTQEFRDAVDALRVPDDNQTDSNLAKTVCLILERVDPIRVNYWLWQK 320

Query: 121 SKLPQ 125
           SKLPQ
Sbjct: 321 SKLPQ 325

[Close]

BLAST of Cucsat.G16578.T7 vs. ExPASy TrEMBL
Match: A0A1S3BYS8 (protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha OS=Cucumis melo OX=3656 GN=LOC103494543 PE=3 SV=1)

HSP 1 Score: 243 bits (620), Expect = 2.44e-78
Identity = 119/125 (95.20%), Postives = 121/125 (96.80%), Query Frame = 0


Query: 1   MRESEVNYTVEAILAHPENESSWRYLRGLYAGDTQSWIIAPQVSSVCLKVLGSRINFVFA 60
           MRESEVNYTVEAILAHPENESSWRYLRGLYAGDTQSWIIA QVSSVCLKVL S+INF+FA
Sbjct: 201 MRESEVNYTVEAILAHPENESSWRYLRGLYAGDTQSWIIASQVSSVCLKVLKSKINFLFA 260

Query: 61  LSTLLDLLSHGFPSTQAFRDAVDALRVPDDNQTDSNLAKTACLILERVDPIRVNYWLWQK 120
           LSTLLDLLSHGFPSTQ FRDAVDALRVPDDNQTDSNLAKT CLILERVDPIRVNYWLWQK
Sbjct: 261 LSTLLDLLSHGFPSTQEFRDAVDALRVPDDNQTDSNLAKTVCLILERVDPIRVNYWLWQK 320

Query: 121 SKLPQ 125
           SKLPQ
Sbjct: 321 SKLPQ 325

[Close]

BLAST of Cucsat.G16578.T7 vs. ExPASy TrEMBL
Match: A0A5D3CYK3 (Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold130G001350 PE=3 SV=1)

HSP 1 Score: 241 bits (615), Expect = 3.74e-77
Identity = 118/124 (95.16%), Postives = 120/124 (96.77%), Query Frame = 0


Query: 1   MRESEVNYTVEAILAHPENESSWRYLRGLYAGDTQSWIIAPQVSSVCLKVLGSRINFVFA 60
           MRESEVNYTVEAILAHPENESSWRYLRGLYAGDTQSWIIA QVSSVCLKVL S+INF+FA
Sbjct: 201 MRESEVNYTVEAILAHPENESSWRYLRGLYAGDTQSWIIASQVSSVCLKVLKSKINFLFA 260

Query: 61  LSTLLDLLSHGFPSTQAFRDAVDALRVPDDNQTDSNLAKTACLILERVDPIRVNYWLWQK 120
           LSTLLDLLSHGFPSTQ FRDAVDALRVPDDNQTDSNLAKT CLILERVDPIRVNYWLWQK
Sbjct: 261 LSTLLDLLSHGFPSTQEFRDAVDALRVPDDNQTDSNLAKTVCLILERVDPIRVNYWLWQK 320

Query: 121 SKLP 124
           SKLP
Sbjct: 321 SKLP 324

[Close]

BLAST of Cucsat.G16578.T7 vs. ExPASy TrEMBL
Match: A0A6J1CVB2 (protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha OS=Momordica charantia OX=3673 GN=LOC111014704 PE=3 SV=1)

HSP 1 Score: 216 bits (549), Expect = 1.32e-67
Identity = 106/125 (84.80%), Postives = 114/125 (91.20%), Query Frame = 0


Query: 1   MRESEVNYTVEAILAHPENESSWRYLRGLYAGDTQSWIIAPQVSSVCLKVLGSRINFVFA 60
           MRESEVNYTVEAILAHP+NESSWRYLRGLY+GDT SWI APQVSSVCLKVL  + N+VFA
Sbjct: 201 MRESEVNYTVEAILAHPKNESSWRYLRGLYSGDTDSWITAPQVSSVCLKVLKGKSNYVFA 260

Query: 61  LSTLLDLLSHGFPSTQAFRDAVDALRVPDDNQTDSNLAKTACLILERVDPIRVNYWLWQK 120
           LSTLLDLL HGF STQ FRDAVDALR+PD + +DS+LAKT CLILERVDPIRVNYWLWQK
Sbjct: 261 LSTLLDLLCHGFQSTQEFRDAVDALRIPD-HPSDSDLAKTVCLILERVDPIRVNYWLWQK 320

Query: 121 SKLPQ 125
           SKLPQ
Sbjct: 321 SKLPQ 324

The following BLAST results are available for this feature:

BLAST of Cucsat.G16578.T7 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O24304	9.0e-36	57.60	Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha OS=Pi...	[more]
Q9LX33	3.9e-31	56.45	Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha OS=Ar...	[more]
P93227	2.0e-27	55.37	Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha OS=So...	[more]
Q54RT9	9.1e-04	28.95	Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha OS=Di...	[more]

BLAST of Cucsat.G16578.T7 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004152103.3	1.01e-82	100.00	protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha [Cucu...	[more]
XP_008453985.1	5.04e-78	95.20	PREDICTED: protein farnesyltransferase/geranylgeranyltransferase type-1 subunit ...	[more]
TYK16993.1	7.73e-77	95.16	protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha [Cucu...	[more]
XP_038900826.1	8.77e-74	89.60	protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha [Beni...	[more]
XP_022145198.1	2.73e-67	84.80	protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha [Momo...	[more]

BLAST of Cucsat.G16578.T7 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KW41	2.23e-83	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G015150 PE=3 SV=1	[more]
A0A5A7TSR3	2.44e-78	95.20	Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha OS=Cu...	[more]
A0A1S3BYS8	2.44e-78	95.20	protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha OS=Cu...	[more]
A0A5D3CYK3	3.74e-77	95.16	Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha OS=Cu...	[more]
A0A6J1CVB2	1.32e-67	84.80	protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha OS=Mo...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	1.25.40.120	Protein prenylyltransferase	coord: 1..125 e-value: 9.8E-16 score: 59.6
None	No IPR available	PANTHER	PTHR11129	PROTEIN FARNESYLTRANSFERASE ALPHA SUBUNIT/RAB GERANYLGERANYL TRANSFERASE ALPHA SUBUNIT	coord: 1..124
None	No IPR available	PANTHER	PTHR11129:SF1	PROTEIN FARNESYLTRANSFERASE/GERANYLGERANYLTRANSFERASE TYPE-1 SUBUNIT ALPHA	coord: 1..124
None	No IPR available	SUPERFAMILY	48439	Protein prenylyltransferase	coord: 3..122
IPR002088	Protein prenyltransferase, alpha subunit	PROSITE	PS51147	PFTA	coord: 1..35 score: 12.381409

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cucsat.G16578	Cucsat.G16578	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsat.G16578.T7.E1	Cucsat.G16578.T7.E1	exon
Cucsat.G16578.T7.E2	Cucsat.G16578.T7.E2	exon
Cucsat.G16578.T7.E3	Cucsat.G16578.T7.E3	exon
Cucsat.G16578.T7.E4	Cucsat.G16578.T7.E4	exon
Cucsat.G16578.T7.E5	Cucsat.G16578.T7.E5	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsat.G16578.T7.C1	Cucsat.G16578.T7.C1	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cucsat.G16578.T7	Cucsat.G16578.T7-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0018342	protein prenylation
biological_process	GO:0009788	negative regulation of abscisic acid-activated signaling pathway
biological_process	GO:0018343	protein farnesylation
biological_process	GO:0018344	protein geranylgeranylation
biological_process	GO:0008360	regulation of cell shape
biological_process	GO:0048509	regulation of meristem development
biological_process	GO:0009414	response to water deprivation
cellular_component	GO:0005953	CAAX-protein geranylgeranyltransferase complex
cellular_component	GO:0005965	protein farnesyltransferase complex
molecular_function	GO:0008318	protein prenyltransferase activity
molecular_function	GO:0004662	CAAX-protein geranylgeranyltransferase activity
molecular_function	GO:0004660	protein farnesyltransferase activity