Cucsat.G15014.T6 (mRNA) Cucumber (B10) v3

Overview


Name	Cucsat.G15014.T6
Type	mRNA
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	ras-related protein RABC2a-like
Location	ctg191: 118031 .. 119977 (-)
RNA-Seq Expression	Cucsat.G15014.T6
Synteny	Cucsat.G15014.T6

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CCCCATTTCGTTTACGACACTTGCCAGTTTGATGCTTTCGAGCATGTCTTTATCCTATGTTCTTGTATGCAGCTGGACAAGAGAGATTTGGAACATTGACAAGCTCTTACTACAGAGGCGCACATGGAATCATCCTAGGTATGATAGAAAGGAGACAAAAATTCTCTTTCCACAATTGTCCTGAAAATAAACTTCGAAAGTTTAATCAAGACTCTGTTCAATGATATTAAATGAAAAACAATCAGAATTTGAGAGCATATGGAGACTTTTTTCTTGGTAACTGAGACAACTAGAATTGCGAATTGACATTAGAAATAGACTAAAGAGACTGAGAATCATGCTTCACCTTCATCTTTTATATTCTCTCATACAGACAGTTAATAGAAGTTGAGGCATTTGTTTGCCTGTCCGAGTTAAGCAGTATTGAAAACAAACGCTCCATTCAAAGCAGTTGGCTGTTTTATTTTCCGTCATGCCAACAACATCTGACACCTTTTTTCTCCTCATTTATGTTGTGTTCTTTTTCCATGTTTTCTTTCTTGCGTTTTATAAGTATCCGATATCTTTCTATTTTGGAAACTATCTCTCATGCCATGTTTTCTCACCATTGAATGTTTTGAATTTAGTTTGAACTTCATGAGGCCTGACACTGATCTATGTTTCACCATTAGTGTACGATGTTACCCGGCGGGAGACGTTTACAAACTTGATAAATGTATGGGCAAAGGAAGTAGAGCTGTACTTAACCAATCGTGAGTGCATAAAGATTCTAGTAGGAAATAAAGTCGATCGGGTAAGTTTGTACTACTATTCCACATCCATCCTTTGTCAACATTCTGTTTCCATACTGTCTTAACTATCATGCATTGGACAACATTGATAATAGTCAAACCTTTAATCCTTCATTCCAACTTACATTACATTAGGAGAGAATTTTTAAATCATGTTTTTAAGTGTGGCTGCCATGTTCACTGAATATTATTGACAGGGTAGTGACAGAGCAGTAACAACAGAAGAAGGCATGGAAGTTGCCAAGAAGCATAAAAGTTTATTTCTTGAGTGCAGTGCTCGAACTCGAGAAAATGTCGACAGATGCTTTAAAGAACTCTCTTCAAAGGTAACACTCTTAATTGTTATAGTGGAACTAAATGTCGACAGTGCTCCTAAGTATGGTCACTGCACAGCGTACACCGGGTGATTTGAAAAATTGGGAAAAAGAGGTGTGTTCAAAACTATTGAGGGAGAAGGGGTGTCTTTTTTATGTCATTTTGTGGAGTGGGTCCCACTAGCTATAAATTATTATTATTACTATTAGTACTACTACTGAAAACTTTCATTTATTTTCCATGTTGGGTTGGCTGTAAAGAACGATCGAAACCCGATCTTCAATGCCAAATATATTTTATTTCATGGCCTTTGGGCATGGTCTAAGTGGTTTATCGTATATAATCCAGATGATGGAAGTTCCAAGTCTACTGGAAAATGGATCTGTTGTTGTGAAACAGAAAATTTTGGACAAAACACAAGCACGCAAAGAAGTGGAAGTGAACGACAGGGGTTGTTGCCACTGAGAAAACCGTGTAACGGCACAAAACAGAACTTACAGAAACAGATTTAGAAGATCTTAGATACTGCTGGTAGAAAATGTTGATCAGAACAGACCCAAGAAAATACACCAAGGGGAAGATTCCATGATCTTTTGCAATTCCATTTTGGCTACCACTGTTTCCAGCAGTTTTCTTTTTCTATCTTAAAAATGCATTTCAATAGTATCTTTAGGATCTCTGTATATGGTTGGTTATATTTTGGGCAAAAATGAGTTGCTGAATTTTGTTGAGACAGATTTTGAGTGAAAATATGTAATAAAAAATATGTAGATAATGTGAATACAGTTTGTTTATTTATTTTTTGTTTTAGTTTTATATATTGATAAGGGCTATTATGCTG

Coding sequence (CDS)

ATGTTCTTGTATGCAGCTGGACAAGAGAGATTTGGAACATTGACAAGCTCTTACTACAGAGGCGCACATGGAATCATCCTAGTGTACGATGTTACCCGGCGGGAGACGTTTACAAACTTGATAAATGTATGGGCAAAGGAAGTAGAGCTGTACTTAACCAATCGTGAGTGCATAAAGATTCTAGTAGGAAATAAAGTCGATCGGGGTAGTGACAGAGCAGTAACAACAGAAGAAGGCATGGAAGTTGCCAAGAAGCATAAAAGTTTATTTCTTGAGTGCAGTGCTCGAACTCGAGAAAATGTCGACAGATGCTTTAAAGAACTCTCTTCAAAGATGATGGAAGTTCCAAGTCTACTGGAAAATGGATCTGTTGTTGTGAAACAGAAAATTTTGGACAAAACACAAGCACGCAAAGAAGTGGAAGTGAACGACAGGGGTTGTTGCCACTGA

Protein sequence

MFLYAAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLINVWAKEVELYLTNRECIKILVGNKVDRGSDRAVTTEEGMEVAKKHKSLFLECSARTRENVDRCFKELSSKMMEVPSLLENGSVVVKQKILDKTQARKEVEVNDRGCCH

Homology

[Close]

BLAST of Cucsat.G15014.T6 vs. ExPASy Swiss-Prot
Match: O49841 (Ras-related protein RABC2a OS=Arabidopsis thaliana OX=3702 GN=RABC2A PE=1 SV=1)

HSP 1 Score: 191.8 bits (486), Expect = 5.5e-48
Identity = 95/144 (65.97%), Postives = 119/144 (82.64%), Query Frame = 0


Query: 6   AGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLINVWAKEVELYLTNRECIKILVGNK 65
           AGQERF TLTSSYYRGA GIILVYDVTRRETFTNL++VW KE+ELY TN+EC+++LVGNK
Sbjct: 69  AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLVDVWGKEIELYSTNQECVRMLVGNK 128

Query: 66  VDRGSDRAVTTEEGMEVAKKHKSLFLECSARTRENVDRCFKELSSKMMEVPSLLENGSVV 125
           VDR S+R V+ EEG+ +AK+   +FLECSARTR+NV++CF+EL+ K+MEVPSLLE GS  
Sbjct: 129 VDRESERGVSREEGIALAKELNCMFLECSARTRQNVEQCFEELALKIMEVPSLLEEGSSA 188

Query: 126 VKQKILDKTQARKEVEVNDR-GCC 149
           VK+ IL   + + E + N + GCC
Sbjct: 189 VKRNIL---KQKPEHQTNTQSGCC 209

[Close]

BLAST of Cucsat.G15014.T6 vs. ExPASy Swiss-Prot
Match: Q9SF92 (Ras-related protein RABC2b OS=Arabidopsis thaliana OX=3702 GN=RABC2B PE=2 SV=1)

HSP 1 Score: 176.8 bits (447), Expect = 1.8e-43
Identity = 87/124 (70.16%), Postives = 104/124 (83.87%), Query Frame = 0


Query: 6   AGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLINVWAKEVELYLTNRECIKILVGNK 65
           AGQE+F TLTSSY+RG+ GIILVYDVT+RETF NL ++WAKE+ELY TN +CIK+LVGNK
Sbjct: 69  AGQEKFRTLTSSYFRGSQGIILVYDVTKRETFLNLADIWAKEIELYSTNHDCIKMLVGNK 128

Query: 66  VDRGSDRAVTTEEGMEVAKKHKSLFLECSARTRENVDRCFKELSSKMMEVPSLLENGSVV 125
           VDR S+R V+ EEGM +AK    LF ECSARTRENV+ CF+EL+ K+MEVPSLLE GS  
Sbjct: 129 VDRESERKVSREEGMALAKDLNCLFHECSARTRENVNGCFEELALKIMEVPSLLEEGSSS 188

Query: 126 VKQK 130
           VK+K
Sbjct: 189 VKRK 192

[Close]

BLAST of Cucsat.G15014.T6 vs. ExPASy Swiss-Prot
Match: O23657 (Ras-related protein RABC1 OS=Arabidopsis thaliana OX=3702 GN=RABC1 PE=1 SV=1)

HSP 1 Score: 171.0 bits (432), Expect = 1.0e-41
Identity = 83/143 (58.04%), Postives = 111/143 (77.62%), Query Frame = 0


Query: 6   AGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLINVWAKEVELYLTNRECIKILVGNK 65
           AGQERF TLTSSYYRGA GII+VYDVTRR+TFTNL ++WAKE++LY TN++CIK+LVGNK
Sbjct: 69  AGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDIWAKEIDLYSTNQDCIKMLVGNK 128

Query: 66  VDRGSDRAVTTEEGMEVAKKHKSLFLECSARTRENVDRCFKELSSKMMEVPSLLENGSVV 125
           VD+ S+RAV+ +EG++ A+++  LFLECSA+TR NV++CF+EL  K++E PSL   GS  
Sbjct: 129 VDKESERAVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILETPSLTAEGSSG 188

Query: 126 VKQKILDKTQARKEVEVNDRGCC 149
            K+ I  +  A +    +   CC
Sbjct: 189 GKKNIFKQNPA-QTTSTSSSYCC 210

[Close]

BLAST of Cucsat.G15014.T6 vs. ExPASy Swiss-Prot
Match: Q6DHC1 (Ras-related protein Rab-18-B OS=Danio rerio OX=7955 GN=rab18b PE=2 SV=1)

HSP 1 Score: 128.3 bits (321), Expect = 7.5e-29
Identity = 63/116 (54.31%), Postives = 84/116 (72.41%), Query Frame = 0


Query: 6   AGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLINVWAKEVELYLTNRECIKILVGNK 65
           AGQERF TLT SYYRGA G+ILVYDVT+R+TFT L N W  E+E Y T  + +K+LVGNK
Sbjct: 65  AGQERFRTLTPSYYRGAQGVILVYDVTKRDTFTKLEN-WLNELETYCTRNDLVKMLVGNK 124

Query: 66  VDRGSDRAVTTEEGMEVAKKHKSLFLECSARTRENVDRCFKELSSKMMEVPSLLEN 122
           +D+  +R V   EG++ A+KH  LF+E SA+TR+ V   F+EL  K+++ P L E+
Sbjct: 125 IDK-DNREVDRNEGLKFARKHSMLFIEASAKTRDGVQCAFEELVEKILQTPGLWES 178

[Close]

BLAST of Cucsat.G15014.T6 vs. ExPASy Swiss-Prot
Match: Q54GY8 (Ras-related protein Rab-18 OS=Dictyostelium discoideum OX=44689 GN=rab18 PE=3 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 2.2e-28
Identity = 67/142 (47.18%), Postives = 90/142 (63.38%), Query Frame = 0


Query: 6   AGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLINVWAKEVELYLTNRECIKILVGNK 65
           AGQE+F  L SSYYRGAHGIIL YDVT+RE+F NL N W  EVE +      +K+LVGNK
Sbjct: 63  AGQEKFRALISSYYRGAHGIILTYDVTKRESFDNL-NYWLNEVENFANRSNLVKLLVGNK 122

Query: 66  VDRGSDRAVTTEEGMEVAKKHKSLFLECSARTRENVDRCFKELSSKMMEVPSLLENGSVV 125
           +D+  +R VT EEG E AKK   LF+ECSA+++  + + F+EL+ K++E+P      S  
Sbjct: 123 IDK-ENREVTREEGAEFAKKKAMLFIECSAKSKIGIQQAFEELAQKIIEIPQ--NTSSSQ 182

Query: 126 VKQKILDKTQARKEVEVNDRGC 148
            KQ+     +   E + N   C
Sbjct: 183 PKQRNTGSVKVEDEPDHNQGVC 200

[Close]

BLAST of Cucsat.G15014.T6 vs. NCBI nr
Match: XP_004150373.1 (ras-related protein RABC2a [Cucumis sativus] >KGN62197.1 hypothetical protein Csa_006823 [Cucumis sativus])

HSP 1 Score: 289 bits (740), Expect = 2.16e-97
Identity = 144/144 (100.00%), Postives = 144/144 (100.00%), Query Frame = 0


Query: 6   AGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLINVWAKEVELYLTNRECIKILVGNK 65
           AGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLINVWAKEVELYLTNRECIKILVGNK
Sbjct: 72  AGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLINVWAKEVELYLTNRECIKILVGNK 131

Query: 66  VDRGSDRAVTTEEGMEVAKKHKSLFLECSARTRENVDRCFKELSSKMMEVPSLLENGSVV 125
           VDRGSDRAVTTEEGMEVAKKHKSLFLECSARTRENVDRCFKELSSKMMEVPSLLENGSVV
Sbjct: 132 VDRGSDRAVTTEEGMEVAKKHKSLFLECSARTRENVDRCFKELSSKMMEVPSLLENGSVV 191

Query: 126 VKQKILDKTQARKEVEVNDRGCCH 149
           VKQKILDKTQARKEVEVNDRGCCH
Sbjct: 192 VKQKILDKTQARKEVEVNDRGCCH 215

[Close]

BLAST of Cucsat.G15014.T6 vs. NCBI nr
Match: XP_008456546.1 (PREDICTED: ras-related protein RABC2a-like [Cucumis melo])

HSP 1 Score: 278 bits (710), Expect = 8.00e-93
Identity = 134/144 (93.06%), Postives = 143/144 (99.31%), Query Frame = 0


Query: 6   AGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLINVWAKEVELYLTNRECIKILVGNK 65
           AGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLIN+WAKEVELYLTNRECIKILVGNK
Sbjct: 72  AGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLINIWAKEVELYLTNRECIKILVGNK 131

Query: 66  VDRGSDRAVTTEEGMEVAKKHKSLFLECSARTRENVDRCFKELSSKMMEVPSLLENGSVV 125
           VDRGS+RAVTTEEGME+AK+HKSLFLECSARTRENVDRCF+ELSSK++EVPSLLENGS+V
Sbjct: 132 VDRGSERAVTTEEGMEIAKEHKSLFLECSARTRENVDRCFRELSSKILEVPSLLENGSIV 191

Query: 126 VKQKILDKTQARKEVEVNDRGCCH 149
           VKQKILDKT+A KEVEVNDRGCCH
Sbjct: 192 VKQKILDKTRAHKEVEVNDRGCCH 215

[Close]

BLAST of Cucsat.G15014.T6 vs. NCBI nr
Match: TYJ99964.1 (ras-related protein RABC2a-like [Cucumis melo var. makuwa])

HSP 1 Score: 278 bits (710), Expect = 3.76e-92
Identity = 134/144 (93.06%), Postives = 143/144 (99.31%), Query Frame = 0


Query: 6   AGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLINVWAKEVELYLTNRECIKILVGNK 65
           AGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLIN+WAKEVELYLTNRECIKILVGNK
Sbjct: 118 AGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLINIWAKEVELYLTNRECIKILVGNK 177

Query: 66  VDRGSDRAVTTEEGMEVAKKHKSLFLECSARTRENVDRCFKELSSKMMEVPSLLENGSVV 125
           VDRGS+RAVTTEEGME+AK+HKSLFLECSARTRENVDRCF+ELSSK++EVPSLLENGS+V
Sbjct: 178 VDRGSERAVTTEEGMEIAKEHKSLFLECSARTRENVDRCFRELSSKILEVPSLLENGSIV 237

Query: 126 VKQKILDKTQARKEVEVNDRGCCH 149
           VKQKILDKT+A KEVEVNDRGCCH
Sbjct: 238 VKQKILDKTRAHKEVEVNDRGCCH 261

[Close]

BLAST of Cucsat.G15014.T6 vs. NCBI nr
Match: XP_038885704.1 (ras-related protein RABC2a-like [Benincasa hispida])

HSP 1 Score: 265 bits (677), Expect = 7.92e-88
Identity = 131/144 (90.97%), Postives = 140/144 (97.22%), Query Frame = 0


Query: 6   AGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLINVWAKEVELYLTNRECIKILVGNK 65
           AGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNL++VWAKEVE+YLTNRECIKILVGNK
Sbjct: 72  AGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLMDVWAKEVEMYLTNRECIKILVGNK 131

Query: 66  VDRGSDRAVTTEEGMEVAKKHKSLFLECSARTRENVDRCFKELSSKMMEVPSLLENGSVV 125
           VDRGS+RAVTTEEGMEVAK+HKSLFLECSARTRENVDRCF+ELSSK++EVPSLLENGSVV
Sbjct: 132 VDRGSERAVTTEEGMEVAKEHKSLFLECSARTRENVDRCFRELSSKILEVPSLLENGSVV 191

Query: 126 VKQKILDKTQARKEVEVNDRGCCH 149
           VKQKILD T+ARKE   NDRGCCH
Sbjct: 192 VKQKILDNTRARKEA--NDRGCCH 213

[Close]

BLAST of Cucsat.G15014.T6 vs. NCBI nr
Match: XP_022952871.1 (ras-related protein RABC2a-like [Cucurbita moschata] >XP_022952881.1 ras-related protein RABC2a-like [Cucurbita moschata] >XP_023514704.1 ras-related protein RABC2a-like [Cucurbita pepo subsp. pepo] >XP_023514780.1 ras-related protein RABC2a-like [Cucurbita pepo subsp. pepo] >KAG6602284.1 Ras-related protein RABC2a, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 255 bits (651), Expect = 7.19e-84
Identity = 127/143 (88.81%), Postives = 137/143 (95.80%), Query Frame = 0


Query: 6   AGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLINVWAKEVELYLTNRECIKILVGNK 65
           AGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNL++VWAKEVE+YLTN ECIKILVGNK
Sbjct: 72  AGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLMDVWAKEVEMYLTNHECIKILVGNK 131

Query: 66  VDRGSDRAVTTEEGMEVAKKHKSLFLECSARTRENVDRCFKELSSKMMEVPSLLENGSVV 125
           VDRGS+RAV+TEEGM VAK+H+SLFLECSARTRENVDRCFKELSSK++EVPSLLENGSVV
Sbjct: 132 VDRGSERAVSTEEGMAVAKEHQSLFLECSARTRENVDRCFKELSSKILEVPSLLENGSVV 191

Query: 126 VKQKILDKTQARKEVEVNDRGCC 148
           VKQKILDKT+ARKE   ND GCC
Sbjct: 192 VKQKILDKTRARKEA--NDGGCC 212

[Close]

BLAST of Cucsat.G15014.T6 vs. ExPASy TrEMBL
Match: A0A0A0LN27 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G326500 PE=4 SV=1)

HSP 1 Score: 289 bits (740), Expect = 1.04e-97
Identity = 144/144 (100.00%), Postives = 144/144 (100.00%), Query Frame = 0


Query: 6   AGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLINVWAKEVELYLTNRECIKILVGNK 65
           AGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLINVWAKEVELYLTNRECIKILVGNK
Sbjct: 72  AGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLINVWAKEVELYLTNRECIKILVGNK 131

Query: 66  VDRGSDRAVTTEEGMEVAKKHKSLFLECSARTRENVDRCFKELSSKMMEVPSLLENGSVV 125
           VDRGSDRAVTTEEGMEVAKKHKSLFLECSARTRENVDRCFKELSSKMMEVPSLLENGSVV
Sbjct: 132 VDRGSDRAVTTEEGMEVAKKHKSLFLECSARTRENVDRCFKELSSKMMEVPSLLENGSVV 191

Query: 126 VKQKILDKTQARKEVEVNDRGCCH 149
           VKQKILDKTQARKEVEVNDRGCCH
Sbjct: 192 VKQKILDKTQARKEVEVNDRGCCH 215

[Close]

BLAST of Cucsat.G15014.T6 vs. ExPASy TrEMBL
Match: A0A1S3C3K9 (ras-related protein RABC2a-like OS=Cucumis melo OX=3656 GN=LOC103496466 PE=4 SV=1)

HSP 1 Score: 278 bits (710), Expect = 3.87e-93
Identity = 134/144 (93.06%), Postives = 143/144 (99.31%), Query Frame = 0


Query: 6   AGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLINVWAKEVELYLTNRECIKILVGNK 65
           AGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLIN+WAKEVELYLTNRECIKILVGNK
Sbjct: 72  AGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLINIWAKEVELYLTNRECIKILVGNK 131

Query: 66  VDRGSDRAVTTEEGMEVAKKHKSLFLECSARTRENVDRCFKELSSKMMEVPSLLENGSVV 125
           VDRGS+RAVTTEEGME+AK+HKSLFLECSARTRENVDRCF+ELSSK++EVPSLLENGS+V
Sbjct: 132 VDRGSERAVTTEEGMEIAKEHKSLFLECSARTRENVDRCFRELSSKILEVPSLLENGSIV 191

Query: 126 VKQKILDKTQARKEVEVNDRGCCH 149
           VKQKILDKT+A KEVEVNDRGCCH
Sbjct: 192 VKQKILDKTRAHKEVEVNDRGCCH 215

[Close]

BLAST of Cucsat.G15014.T6 vs. ExPASy TrEMBL
Match: A0A5D3BLP5 (Ras-related protein RABC2a-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold360G00050 PE=4 SV=1)

HSP 1 Score: 278 bits (710), Expect = 1.82e-92
Identity = 134/144 (93.06%), Postives = 143/144 (99.31%), Query Frame = 0


Query: 6   AGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLINVWAKEVELYLTNRECIKILVGNK 65
           AGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLIN+WAKEVELYLTNRECIKILVGNK
Sbjct: 118 AGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLINIWAKEVELYLTNRECIKILVGNK 177

Query: 66  VDRGSDRAVTTEEGMEVAKKHKSLFLECSARTRENVDRCFKELSSKMMEVPSLLENGSVV 125
           VDRGS+RAVTTEEGME+AK+HKSLFLECSARTRENVDRCF+ELSSK++EVPSLLENGS+V
Sbjct: 178 VDRGSERAVTTEEGMEIAKEHKSLFLECSARTRENVDRCFRELSSKILEVPSLLENGSIV 237

Query: 126 VKQKILDKTQARKEVEVNDRGCCH 149
           VKQKILDKT+A KEVEVNDRGCCH
Sbjct: 238 VKQKILDKTRAHKEVEVNDRGCCH 261

[Close]

BLAST of Cucsat.G15014.T6 vs. ExPASy TrEMBL
Match: A0A6J1GLE8 (ras-related protein RABC2a-like OS=Cucurbita moschata OX=3662 GN=LOC111455431 PE=4 SV=1)

HSP 1 Score: 255 bits (651), Expect = 3.48e-84
Identity = 127/143 (88.81%), Postives = 137/143 (95.80%), Query Frame = 0


Query: 6   AGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLINVWAKEVELYLTNRECIKILVGNK 65
           AGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNL++VWAKEVE+YLTN ECIKILVGNK
Sbjct: 72  AGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLMDVWAKEVEMYLTNHECIKILVGNK 131

Query: 66  VDRGSDRAVTTEEGMEVAKKHKSLFLECSARTRENVDRCFKELSSKMMEVPSLLENGSVV 125
           VDRGS+RAV+TEEGM VAK+H+SLFLECSARTRENVDRCFKELSSK++EVPSLLENGSVV
Sbjct: 132 VDRGSERAVSTEEGMAVAKEHQSLFLECSARTRENVDRCFKELSSKILEVPSLLENGSVV 191

Query: 126 VKQKILDKTQARKEVEVNDRGCC 148
           VKQKILDKT+ARKE   ND GCC
Sbjct: 192 VKQKILDKTRARKEA--NDGGCC 212

[Close]

BLAST of Cucsat.G15014.T6 vs. ExPASy TrEMBL
Match: A0A6J1JMZ9 (ras-related protein RABC2a-like OS=Cucurbita maxima OX=3661 GN=LOC111487310 PE=4 SV=1)

HSP 1 Score: 252 bits (643), Expect = 5.75e-83
Identity = 126/143 (88.11%), Postives = 135/143 (94.41%), Query Frame = 0


Query: 6   AGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLINVWAKEVELYLTNRECIKILVGNK 65
           AGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNL+ VWAKEVE+YLTN ECIKILVGNK
Sbjct: 72  AGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLMGVWAKEVEMYLTNHECIKILVGNK 131

Query: 66  VDRGSDRAVTTEEGMEVAKKHKSLFLECSARTRENVDRCFKELSSKMMEVPSLLENGSVV 125
           VDRGS+RAV+TEEGM VAK+H+SLFLECSARTRENVDRCFKELSSK++EVPSLLENGSVV
Sbjct: 132 VDRGSERAVSTEEGMAVAKEHQSLFLECSARTRENVDRCFKELSSKILEVPSLLENGSVV 191

Query: 126 VKQKILDKTQARKEVEVNDRGCC 148
           VKQKILDKT+A KE   ND GCC
Sbjct: 192 VKQKILDKTRALKEA--NDGGCC 212

The following BLAST results are available for this feature:

BLAST of Cucsat.G15014.T6 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O49841	5.5e-48	65.97	Ras-related protein RABC2a OS=Arabidopsis thaliana OX=3702 GN=RABC2A PE=1 SV=1	[more]
Q9SF92	1.8e-43	70.16	Ras-related protein RABC2b OS=Arabidopsis thaliana OX=3702 GN=RABC2B PE=2 SV=1	[more]
O23657	1.0e-41	58.04	Ras-related protein RABC1 OS=Arabidopsis thaliana OX=3702 GN=RABC1 PE=1 SV=1	[more]
Q6DHC1	7.5e-29	54.31	Ras-related protein Rab-18-B OS=Danio rerio OX=7955 GN=rab18b PE=2 SV=1	[more]
Q54GY8	2.2e-28	47.18	Ras-related protein Rab-18 OS=Dictyostelium discoideum OX=44689 GN=rab18 PE=3 SV...	[more]

BLAST of Cucsat.G15014.T6 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004150373.1	2.16e-97	100.00	ras-related protein RABC2a [Cucumis sativus] >KGN62197.1 hypothetical protein Cs...	[more]
XP_008456546.1	8.00e-93	93.06	PREDICTED: ras-related protein RABC2a-like [Cucumis melo]	[more]
TYJ99964.1	3.76e-92	93.06	ras-related protein RABC2a-like [Cucumis melo var. makuwa]	[more]
XP_038885704.1	7.92e-88	90.97	ras-related protein RABC2a-like [Benincasa hispida]	[more]
XP_022952871.1	7.19e-84	88.81	ras-related protein RABC2a-like [Cucurbita moschata] >XP_022952881.1 ras-related...	[more]

BLAST of Cucsat.G15014.T6 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LN27	1.04e-97	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G326500 PE=4 SV=1	[more]
A0A1S3C3K9	3.87e-93	93.06	ras-related protein RABC2a-like OS=Cucumis melo OX=3656 GN=LOC103496466 PE=4 SV=...	[more]
A0A5D3BLP5	1.82e-92	93.06	Ras-related protein RABC2a-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A6J1GLE8	3.48e-84	88.81	ras-related protein RABC2a-like OS=Cucurbita moschata OX=3662 GN=LOC111455431 PE...	[more]
A0A6J1JMZ9	5.75e-83	88.11	ras-related protein RABC2a-like OS=Cucurbita maxima OX=3661 GN=LOC111487310 PE=4...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00449	RASTRNSFRMNG	coord: 90..112 score: 34.38 coord: 55..68 score: 42.24
None	No IPR available	SMART	SM00175	rab_sub_5	coord: 6..115 e-value: 3.3E-29 score: 113.0
None	No IPR available	SMART	SM00173	ras_sub_4	coord: 1..115 e-value: 1.2E-7 score: -3.2
None	No IPR available	PANTHER	PTHR24073	DRAB5-RELATED	coord: 5..148
None	No IPR available	PANTHER	PTHR24073:SF643	SMALL GTPASE SUPERFAMILY, P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASE-RELATED	coord: 5..148
None	No IPR available	PROSITE	PS51419	RAB	coord: 1..148 score: 20.902861
IPR001806	Small GTPase	SMART	SM00174	rho_sub_3	coord: 1..115 e-value: 1.2E-4 score: -57.9
IPR001806	Small GTPase	PFAM	PF00071	Ras	coord: 5..113 e-value: 9.6E-31 score: 106.6
IPR001806	Small GTPase	PROSITE	PS51421	RAS	coord: 1..149 score: 12.911388
IPR005225	Small GTP-binding protein domain	TIGRFAM	TIGR00231	TIGR00231	coord: 6..108 e-value: 3.6E-12 score: 44.3
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 3..146 e-value: 1.6E-36 score: 127.4
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 6..148

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cucsat.G15014	Cucsat.G15014	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsat.G15014.T6.E1	Cucsat.G15014.T6.E1	exon
Cucsat.G15014.T6.E2	Cucsat.G15014.T6.E2	exon
Cucsat.G15014.T6.E3	Cucsat.G15014.T6.E3	exon
Cucsat.G15014.T6.E4	Cucsat.G15014.T6.E4	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsat.G15014.T6.C4	Cucsat.G15014.T6.C4	CDS
Cucsat.G15014.T6.C3	Cucsat.G15014.T6.C3	CDS
Cucsat.G15014.T6.C2	Cucsat.G15014.T6.C2	CDS
Cucsat.G15014.T6.C1	Cucsat.G15014.T6.C1	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cucsat.G15014.T6	Cucsat.G15014.T6-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006886	intracellular protein transport
cellular_component	GO:0012505	endomembrane system
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding