Cucsat.G15014 (gene) Cucumber (B10) v3

Overview


Name	Cucsat.G15014
Type	gene
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	ras-related protein RABC2a-like
Location	ctg191: 118042 .. 121789 (-)
RNA-Seq Expression	Cucsat.G15014
Synteny	Cucsat.G15014

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAAAAATTGAAAATTCGTGAAGACTTTTTTCCTTTTTCATACGAACAATTGAACAAAGAGACAAATAATGGGTGTTGTTGCAGGCCATAGAAGTAAACAAAAAGCGGAGAGCCCATCGATGACTAGTTGTACACACGTACACTACCGCCTCTCGCCAGCTCCTTCATTGTTACACTTCCATTCTTCTCAAAACGAATTATTTCTCTCTTTTCCCAATGATTTTGATTTCTTCTTCTTCTTCTTCTTCTTTCTGAGAAAAGGTTACTCTCAAAGAAACTTTAAAAGGGGTGGAACAGAAAAAAGGTTGCTTGTTTTGCTTGTTTGTGAGTTGTGAGGTAGAAGAAGAAGAAGAAGAAAAATGATGGGTTCTTCTTCAAAAGGAAGATGCATTAGTTACGATTACTCTTTCAAGATTTTGTTGATTGGGGATTCTGGTGTTGGAAAAAGCAGTATTCTCCTTAGCTACATCTCCAATTTTGTTCATGATCTTTCTCCTACCATCGGTCTCTCTCTCTCTCTATATATATATGTGTGTGTGTGTGTGTGTGTGTGCGCGTGCATGTTTTGATGATTAATTCTCATACCCAGATGCACCATTTCTGAGTTTTGTTCATATTTTAATCCTCAAAGAAATCTCGATAGCTCTGTTGGTTGGTTGGACATATGTTGATCAGATACTCTTATTTTTTCTTCTTCTTTGTGGTTACTTTGCTGTTTATAGTTTTCTGATTGATTTCTGATATTTCAAGTTGTTGAATTGGGATTTATATGCTAGAATGCTTTCTGGAATTTCAAGGGCTACAGTGTTGCTGTACTGTGAGCTAGTGGCTTTGAACCAACTTTGTGGTTTAGTAAAATTTGTTCCCATATACTTGTTGTTTAACAAGTATCGAGATGATTAAATTTACCACAACGCATTTGGGCTTTTAGGTTCATTGGTGAATTAACATGTACTAGAGCAGGACGTTTTGTGTTTGAAATATTGTCATTTCCACACTATTAATATTAATTTTCATTTGTTGGGTATTTTAGGAATTCTCAAGCCCATATCACAAGTGAGAGAAGTGTTAAAACGTTGATATAATTAAATTTACCATAACCAATCAACTAAGTTTTGAGTTTAGGATCATTTAGCAATTCATGACTTAGGAGGGCTATTGTGTCCTTCGAAAGAGCAGATTATACTTGGTGATGCAGGTGCAGGGTGCCCTTAAGGTTTTCATCATTGAGGAGTTTGTAGTGACAATTAAAAGGTCGCCTAGAGAGAGTAGTTTTTTTTTTCTTTCTTTCTCAAACAATTAATTTTTGTGAGAGAAGCTTGTGATTATCATGGTTTATGGATTGGACTGTAAATTGTGCATCGCAAATGTTTGTAATGCATCACTCCCCATTTTAATCACTACTGCACAAAGTTCCATGTCCCATTTAAGTTTAAAATACTGTTGCAACAAAAAGCAAGAATATTATGTAAGATGGATTGGATGGTTGATACTATTTTAACCTTACAACTCCTCCCTTCCTCTGTTTAAGTGTGCTGCGGAGAAGCAGCCTTCTTTAACTTCCCGTTGCTCTCGTGTAATCTCCATTTTGTGCATTGCTCCAGGTGTGGATTTCAAGATCAAGATGGTAACAGTTGGTGGAAAAAAATTGAAGCTAACAATTTGGGATACAGGTAACTGGATGATTGACTAGTTCTTTCTGGTTACATTTTTACTATTTTACTTGTCCCAGCTTATCTACATAGGATATTTTATGAAGTTTTCTTTTTCCCATCCAACGTGAGAAAATAACAGTTGTTCAGGTGTTATAAAAAACTAATGTGATTCAATGCTCTTTGTCGAGGGTTTTCTTTTCCCCATTTCGTTTACGACACTTGCCAGTTTGATGCTTTCGAGCATGTCTTTATCCTATGTTCTTGTATGCAGCTGGACAAGAGAGATTTGGAACATTGACAAGCTCTTACTACAGAGGCGCACATGGAATCATCCTAGGTATGATAGAAAGGAGACAAAAATTCTCTTTCCACAATTGTCCTGAAAATAAACTTCGAAAGTTTAATCAAGACTCTGTTCAATGATATTAAATGAAAAACAATCAGAATTTGAGAGCATATGGAGACTTTTTTCTTGGTAACTGAGACAACTAGAATTGCGAATTGACATTAGAAATAGACTAAAGAGACTGAGAATCATGCTTCACCTTCATCTTTTATATTCTCTCATACAGACAGTTAATAGAAGTTGAGGCATTTGTTTGCCTGTCCGAGTTAAGCAGTATTGAAAACAAACGCTCCATTCAAAGCAGTTGGCTGTTTTATTTTCCGTCATGCCAACAACATCTGACACCTTTTTTCTCCTCATTTATGTTGTGTTCTTTTTCCATGTTTTCTTTCTTGCGTTTTATAAGTATCCGATATCTTTCTATTTTGGAAACTATCTCTCATGCCATGTTTTCTCACCATTGAATGTTTTGAATTTAGTTTGAACTTCATGAGGCCTGACACTGATCTATGTTTCACCATTAGTGTACGATGTTACCCGGCGGGAGACGTTTACAAACTTGATAAATGTATGGGCAAAGGAAGTAGAGCTGTACTTAACCAATCGTGAGTGCATAAAGATTCTAGTAGGAAATAAAGTCGATCGGGTAAGTTTGTACTACTATTCCACATCCATCCTTTGTCAACATTCTGTTTCCATACTGTCTTAACTATCATGCATTGGACAACATTGATAATAGTCAAACCTTTAATCCTTCATTCCAACTTACATTACATTAGGAGAGAATTTTTAAATCATGTTTTTAAGTGTGGCTGCCATGTTCACTGAATATTATTGACAGGGTAGTGACAGAGCAGTAACAACAGAAGAAGGCATGGAAGTTGCCAAGAAGCATAAAAGTTTATTTCTTGAGTGCAGTGCTCGAACTCGAGAAAATGTCGACAGATGCTTTAAAGAACTCTCTTCAAAGGTAACACTCTTAATTGTTATAGTGGAACTAAATGTCGACAGTGCTCCTAAGTATGGTCACTGCACAGCGTACACCGGGTGATTTGAAAAATTGGGAAAAAGAGGTGTGTTCAAAACTATTGAGGGAGAAGGGGTGTCTTTTTTATGTCATTTTGTGGAGTGGGTCCCACTAGCTATAAATTATTATTATTACTATTAGTACTACTACTGAAAACTTTCATTTATTTTCCATGTTGGGTTGGCTGTAAAGAACGATCGAAACCCGATCTTCAATGCCAAATATATTTTATTTCATGGCCTTTGGGCATGGTCTAAGTGGTTTATCGTATATAATCCAGATGATGGAAGTTCCAAGTCTACTGGAAAATGGATCTGTTGTTGTGAAACAGAAAATTTTGGACAAAACACAAGCACGCAAAGAAGTGGAAGTGAACGACAGGGGTTGTTGCCACTGAGAAAACCGTGTAACGGCACAAAACAGAACTTACAGAAACAGATTTAGAAGATCTTAGATACTGCTGGTAGAAAATGTTGATCAGAACAGACCCAAGAAAATACACCAAGGGGAAGATTCCATGATCTTTTGCAATTCCATTTTGGCTACCACTGTTTCCAGCAGTTTTCTTTTTCTATCTTAAAAATGCATTTCAATAGTATCTTTAGGATCTCTGTATATGGTTGGTTATATTTTGGGCAAAAATGAGTTGCTGAATTTTGTTGAGACAGATTTTGAGTGAAAATATGTAATAAAAAATATGTAGATAATGTGAATACAGTTTGTTTATTTATTTTTTGTTTTAGTTTTATATATTGATAAGGGCTATTATGCTGTAGAAGCTTCCTTATACTTTGGTCTTAAATCTATAGAATGCTTTAAATAATTCTCCTAAAGT

Coding sequence (CDS)

ATGATGGGTTCTTCTTCAAAAGGAAGATGCATTAGTTACGATTACTCTTTCAAGATTTTGTTGATTGGGGATTCTGGTGTTGGAAAAAGCAGTATTCTCCTTAGCTACATCTCCAATTTTGTTCATGATCTTTCTCCTACCATCGGTGTGGATTTCAAGATCAAGATGGTAACAGTTGGTGGAAAAAAATTGAAGCTAACAATTTGGGATACAGCTGGACAAGAGAGATTTGGAACATTGACAAGCTCTTACTACAGAGGCGCACATGGAATCATCCTAGTGTACGATGTTACCCGGCGGGAGACGTTTACAAACTTGATAAATGTATGGGCAAAGGAAGTAGAGCTGTACTTAACCAATCGTGAGTGCATAAAGATTCTAGTAGGAAATAAAGTCGATCGGGGTAGTGACAGAGCAGTAACAACAGAAGAAGGCATGGAAGTTGCCAAGAAGCATAAAAGTTTATTTCTTGAGTGCAGTGCTCGAACTCGAGAAAATGTCGACAGATGCTTTAAAGAACTCTCTTCAAAGATGATGGAAGTTCCAAGTCTACTGGAAAATGGATCTGTTGTTGTGAAACAGAAAATTTTGGACAAAACACAAGCACGCAAAGAAGTGGAAGTGAACGACAGGGGTTGTTGCCACTGA

Protein sequence

MMGSSSKGRCISYDYSFKILLIGDSGVGKSSILLSYISNFVHDLSPTIGVDFKIKMVTVGGKKLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLINVWAKEVELYLTNRECIKILVGNKVDRGSDRAVTTEEGMEVAKKHKSLFLECSARTRENVDRCFKELSSKMMEVPSLLENGSVVVKQKILDKTQARKEVEVNDRGCCH

Homology

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BLAST of Cucsat.G15014 vs. ExPASy Swiss-Prot
Match: O49841 (Ras-related protein RABC2a OS=Arabidopsis thaliana OX=3702 GN=RABC2A PE=1 SV=1)

HSP 1 Score: 212.2 bits (539), Expect = 3.5e-54
Identity = 106/133 (79.70%), Postives = 121/133 (90.98%), Query Frame = 0


Query: 2   MGSSSKGRCISYDYSFKILLIGDSGVGKSSILLSYISNFVHDLSPTIGVDFKIKMVTVGG 61
           MGSSS G+   YD SFKILLIGDSGVGKSS+L+S+IS+ V DL+PTIGVDFKIK +TVGG
Sbjct: 1   MGSSS-GQS-GYDLSFKILLIGDSGVGKSSLLVSFISSSVEDLAPTIGVDFKIKQLTVGG 60

Query: 62  KKLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLINVWAKEVELYLTNR 121
           K+LKLTIWDTAGQERF TLTSSYYRGA GIILVYDVTRRETFTNL++VW KE+ELY TN+
Sbjct: 61  KRLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLVDVWGKEIELYSTNQ 120

Query: 122 ECIKILVGNKVDR 135
           EC+++LVGNKVDR
Sbjct: 121 ECVRMLVGNKVDR 131

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BLAST of Cucsat.G15014 vs. ExPASy Swiss-Prot
Match: O23657 (Ras-related protein RABC1 OS=Arabidopsis thaliana OX=3702 GN=RABC1 PE=1 SV=1)

HSP 1 Score: 201.1 bits (510), Expect = 8.2e-51
Identity = 98/133 (73.68%), Postives = 115/133 (86.47%), Query Frame = 0


Query: 2   MGSSSKGRCISYDYSFKILLIGDSGVGKSSILLSYISNFVHDLSPTIGVDFKIKMVTVGG 61
           MGSSS      +DY FK+LLIGDSGVGKSS+LLS+ SN   DLSPTIGVDFK+K +T+G 
Sbjct: 1   MGSSSGQP--EFDYLFKVLLIGDSGVGKSSLLLSFTSNTFDDLSPTIGVDFKVKYLTIGE 60

Query: 62  KKLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLINVWAKEVELYLTNR 121
           KKLKL IWDTAGQERF TLTSSYYRGA GII+VYDVTRR+TFTNL ++WAKE++LY TN+
Sbjct: 61  KKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDIWAKEIDLYSTNQ 120

Query: 122 ECIKILVGNKVDR 135
           +CIK+LVGNKVD+
Sbjct: 121 DCIKMLVGNKVDK 131

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BLAST of Cucsat.G15014 vs. ExPASy Swiss-Prot
Match: Q9SF92 (Ras-related protein RABC2b OS=Arabidopsis thaliana OX=3702 GN=RABC2B PE=2 SV=1)

HSP 1 Score: 200.3 bits (508), Expect = 1.4e-50
Identity = 101/133 (75.94%), Postives = 117/133 (87.97%), Query Frame = 0


Query: 2   MGSSSKGRCISYDYSFKILLIGDSGVGKSSILLSYISNFVHDLSPTIGVDFKIKMVTVGG 61
           MGSSS G+   YD SFKILLIGDSGVGKSS+LLS+IS+ V DL+PTIGVDFKIK + V G
Sbjct: 1   MGSSS-GQS-GYDLSFKILLIGDSGVGKSSLLLSFISSSVEDLAPTIGVDFKIKQMKVRG 60

Query: 62  KKLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLINVWAKEVELYLTNR 121
           K+LKLTIWDTAGQE+F TLTSSY+RG+ GIILVYDVT+RETF NL ++WAKE+ELY TN 
Sbjct: 61  KRLKLTIWDTAGQEKFRTLTSSYFRGSQGIILVYDVTKRETFLNLADIWAKEIELYSTNH 120

Query: 122 ECIKILVGNKVDR 135
           +CIK+LVGNKVDR
Sbjct: 121 DCIKMLVGNKVDR 131

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BLAST of Cucsat.G15014 vs. ExPASy Swiss-Prot
Match: P36862 (GTP-binding protein yptV3 OS=Volvox carteri OX=3067 GN=YPTV3 PE=3 SV=1)

HSP 1 Score: 156.0 bits (393), Expect = 3.0e-37
Identity = 77/123 (62.60%), Postives = 93/123 (75.61%), Query Frame = 0


Query: 12  SYDYSFKILLIGDSGVGKSSILLSYISN-FVHDLSPTIGVDFKIKMVTVGGKKLKLTIWD 71
           S+DY+FK+LL+GDSGVGKS IL  + S  F    + TIGVDFK+K +T  GK+ KLTIWD
Sbjct: 5   SHDYTFKVLLVGDSGVGKSCILTRFTSGIFEESTTSTIGVDFKVKYLTADGKRCKLTIWD 64

Query: 72  TAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLINVWAKEVELYLTNRECIKILVGN 131
           TAGQERF TLTSSYYRGA GII VYDVTRR+TF +L   W +E ++Y T    IK++V N
Sbjct: 65  TAGQERFRTLTSSYYRGAQGIIFVYDVTRRDTFESLEANWMREFDIYSTVESAIKMVVAN 124

Query: 132 KVD 134
           KVD
Sbjct: 125 KVD 127

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BLAST of Cucsat.G15014 vs. ExPASy Swiss-Prot
Match: Q5ZLG1 (Ras-related protein Rab-18 OS=Gallus gallus OX=9031 GN=RAB18 PE=2 SV=1)

HSP 1 Score: 150.6 bits (379), Expect = 1.3e-35
Identity = 74/120 (61.67%), Postives = 93/120 (77.50%), Query Frame = 0


Query: 16  SFKILLIGDSGVGKSSILLSYISN-FVHDLSPTIGVDFKIKMVTVGGKKLKLTIWDTAGQ 75
           + KIL+IG+SGVGKSS+LL +  + F  +L+ TIGVDFK+K ++V G K KL IWDTAGQ
Sbjct: 8   TLKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAGQ 67

Query: 76  ERFGTLTSSYYRGAHGIILVYDVTRRETFTNLINVWAKEVELYLTNRECIKILVGNKVDR 135
           ERF TLT SYYRGA G+ILVYDVTRR+TF  L N W  E+E Y T  + +K+LVGNK+D+
Sbjct: 68  ERFRTLTPSYYRGAQGVILVYDVTRRDTFVKLDN-WLNELETYCTRNDIVKMLVGNKIDK 126

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BLAST of Cucsat.G15014 vs. NCBI nr
Match: XP_004150373.1 (ras-related protein RABC2a [Cucumis sativus] >KGN62197.1 hypothetical protein Csa_006823 [Cucumis sativus])

HSP 1 Score: 271 bits (693), Expect = 1.68e-90
Identity = 134/134 (100.00%), Postives = 134/134 (100.00%), Query Frame = 0


Query: 1   MMGSSSKGRCISYDYSFKILLIGDSGVGKSSILLSYISNFVHDLSPTIGVDFKIKMVTVG 60
           MMGSSSKGRCISYDYSFKILLIGDSGVGKSSILLSYISNFVHDLSPTIGVDFKIKMVTVG
Sbjct: 1   MMGSSSKGRCISYDYSFKILLIGDSGVGKSSILLSYISNFVHDLSPTIGVDFKIKMVTVG 60

Query: 61  GKKLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLINVWAKEVELYLTN 120
           GKKLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLINVWAKEVELYLTN
Sbjct: 61  GKKLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLINVWAKEVELYLTN 120

Query: 121 RECIKILVGNKVDR 134
           RECIKILVGNKVDR
Sbjct: 121 RECIKILVGNKVDR 134

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BLAST of Cucsat.G15014 vs. NCBI nr
Match: XP_008456546.1 (PREDICTED: ras-related protein RABC2a-like [Cucumis melo])

HSP 1 Score: 270 bits (689), Expect = 6.82e-90
Identity = 132/134 (98.51%), Postives = 134/134 (100.00%), Query Frame = 0


Query: 1   MMGSSSKGRCISYDYSFKILLIGDSGVGKSSILLSYISNFVHDLSPTIGVDFKIKMVTVG 60
           MMGSSSKGRCISYDYSFKILLIGDSGVGKSSILLSYISNFVHDLSPTIGVDFKIKMVTVG
Sbjct: 1   MMGSSSKGRCISYDYSFKILLIGDSGVGKSSILLSYISNFVHDLSPTIGVDFKIKMVTVG 60

Query: 61  GKKLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLINVWAKEVELYLTN 120
           GK+LKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLIN+WAKEVELYLTN
Sbjct: 61  GKRLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLINIWAKEVELYLTN 120

Query: 121 RECIKILVGNKVDR 134
           RECIKILVGNKVDR
Sbjct: 121 RECIKILVGNKVDR 134

[Close]

BLAST of Cucsat.G15014 vs. NCBI nr
Match: XP_038885704.1 (ras-related protein RABC2a-like [Benincasa hispida])

HSP 1 Score: 264 bits (674), Expect = 1.23e-87
Identity = 129/134 (96.27%), Postives = 133/134 (99.25%), Query Frame = 0


Query: 1   MMGSSSKGRCISYDYSFKILLIGDSGVGKSSILLSYISNFVHDLSPTIGVDFKIKMVTVG 60
           MMGSSSKGRC SYDYSFKILLIGDSGVGKSSILLSYISNFVHDLSPTIGVDFKIKMVTVG
Sbjct: 1   MMGSSSKGRCSSYDYSFKILLIGDSGVGKSSILLSYISNFVHDLSPTIGVDFKIKMVTVG 60

Query: 61  GKKLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLINVWAKEVELYLTN 120
           GK+LKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNL++VWAKEVE+YLTN
Sbjct: 61  GKRLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLMDVWAKEVEMYLTN 120

Query: 121 RECIKILVGNKVDR 134
           RECIKILVGNKVDR
Sbjct: 121 RECIKILVGNKVDR 134

[Close]

BLAST of Cucsat.G15014 vs. NCBI nr
Match: XP_022133444.1 (ras-related protein RABC2a-like [Momordica charantia])

HSP 1 Score: 256 bits (655), Expect = 9.60e-85
Identity = 126/134 (94.03%), Postives = 129/134 (96.27%), Query Frame = 0


Query: 1   MMGSSSKGRCISYDYSFKILLIGDSGVGKSSILLSYISNFVHDLSPTIGVDFKIKMVTVG 60
           MMGSSSKGR  SYDYSFKILLIGDSGVGKSSILLSYISNFVHDLSPTIGVDFKIK VTVG
Sbjct: 1   MMGSSSKGRWFSYDYSFKILLIGDSGVGKSSILLSYISNFVHDLSPTIGVDFKIKTVTVG 60

Query: 61  GKKLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLINVWAKEVELYLTN 120
           GK+LKLTIWDTAGQERFG LTSSYYRGAHGIILVYDVTRRETFTNL+N+WAKEVELYLTN
Sbjct: 61  GKRLKLTIWDTAGQERFGMLTSSYYRGAHGIILVYDVTRRETFTNLLNIWAKEVELYLTN 120

Query: 121 RECIKILVGNKVDR 134
            ECIKILVGNKVDR
Sbjct: 121 HECIKILVGNKVDR 134

[Close]

BLAST of Cucsat.G15014 vs. NCBI nr
Match: XP_022952871.1 (ras-related protein RABC2a-like [Cucurbita moschata] >XP_022952881.1 ras-related protein RABC2a-like [Cucurbita moschata] >XP_023514704.1 ras-related protein RABC2a-like [Cucurbita pepo subsp. pepo] >XP_023514780.1 ras-related protein RABC2a-like [Cucurbita pepo subsp. pepo] >KAG6602284.1 Ras-related protein RABC2a, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 253 bits (645), Expect = 3.20e-83
Identity = 125/134 (93.28%), Postives = 129/134 (96.27%), Query Frame = 0


Query: 1   MMGSSSKGRCISYDYSFKILLIGDSGVGKSSILLSYISNFVHDLSPTIGVDFKIKMVTVG 60
           MMGSSSK R  SYDYSFKILLIGDSGVGKSSILLSYISNFV DLSPTIGVDFKIKMVTVG
Sbjct: 1   MMGSSSKARSSSYDYSFKILLIGDSGVGKSSILLSYISNFVQDLSPTIGVDFKIKMVTVG 60

Query: 61  GKKLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLINVWAKEVELYLTN 120
           GK+LKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNL++VWAKEVE+YLTN
Sbjct: 61  GKRLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLMDVWAKEVEMYLTN 120

Query: 121 RECIKILVGNKVDR 134
            ECIKILVGNKVDR
Sbjct: 121 HECIKILVGNKVDR 134

[Close]

BLAST of Cucsat.G15014 vs. ExPASy TrEMBL
Match: A0A0A0LN27 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G326500 PE=4 SV=1)

HSP 1 Score: 271 bits (693), Expect = 8.12e-91
Identity = 134/134 (100.00%), Postives = 134/134 (100.00%), Query Frame = 0


Query: 1   MMGSSSKGRCISYDYSFKILLIGDSGVGKSSILLSYISNFVHDLSPTIGVDFKIKMVTVG 60
           MMGSSSKGRCISYDYSFKILLIGDSGVGKSSILLSYISNFVHDLSPTIGVDFKIKMVTVG
Sbjct: 1   MMGSSSKGRCISYDYSFKILLIGDSGVGKSSILLSYISNFVHDLSPTIGVDFKIKMVTVG 60

Query: 61  GKKLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLINVWAKEVELYLTN 120
           GKKLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLINVWAKEVELYLTN
Sbjct: 61  GKKLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLINVWAKEVELYLTN 120

Query: 121 RECIKILVGNKVDR 134
           RECIKILVGNKVDR
Sbjct: 121 RECIKILVGNKVDR 134

[Close]

BLAST of Cucsat.G15014 vs. ExPASy TrEMBL
Match: A0A1S3C3K9 (ras-related protein RABC2a-like OS=Cucumis melo OX=3656 GN=LOC103496466 PE=4 SV=1)

HSP 1 Score: 270 bits (689), Expect = 3.30e-90
Identity = 132/134 (98.51%), Postives = 134/134 (100.00%), Query Frame = 0


Query: 1   MMGSSSKGRCISYDYSFKILLIGDSGVGKSSILLSYISNFVHDLSPTIGVDFKIKMVTVG 60
           MMGSSSKGRCISYDYSFKILLIGDSGVGKSSILLSYISNFVHDLSPTIGVDFKIKMVTVG
Sbjct: 1   MMGSSSKGRCISYDYSFKILLIGDSGVGKSSILLSYISNFVHDLSPTIGVDFKIKMVTVG 60

Query: 61  GKKLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLINVWAKEVELYLTN 120
           GK+LKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLIN+WAKEVELYLTN
Sbjct: 61  GKRLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLINIWAKEVELYLTN 120

Query: 121 RECIKILVGNKVDR 134
           RECIKILVGNKVDR
Sbjct: 121 RECIKILVGNKVDR 134

[Close]

BLAST of Cucsat.G15014 vs. ExPASy TrEMBL
Match: A0A6J1BW00 (ras-related protein RABC2a-like OS=Momordica charantia OX=3673 GN=LOC111006017 PE=4 SV=1)

HSP 1 Score: 256 bits (655), Expect = 4.65e-85
Identity = 126/134 (94.03%), Postives = 129/134 (96.27%), Query Frame = 0


Query: 1   MMGSSSKGRCISYDYSFKILLIGDSGVGKSSILLSYISNFVHDLSPTIGVDFKIKMVTVG 60
           MMGSSSKGR  SYDYSFKILLIGDSGVGKSSILLSYISNFVHDLSPTIGVDFKIK VTVG
Sbjct: 1   MMGSSSKGRWFSYDYSFKILLIGDSGVGKSSILLSYISNFVHDLSPTIGVDFKIKTVTVG 60

Query: 61  GKKLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLINVWAKEVELYLTN 120
           GK+LKLTIWDTAGQERFG LTSSYYRGAHGIILVYDVTRRETFTNL+N+WAKEVELYLTN
Sbjct: 61  GKRLKLTIWDTAGQERFGMLTSSYYRGAHGIILVYDVTRRETFTNLLNIWAKEVELYLTN 120

Query: 121 RECIKILVGNKVDR 134
            ECIKILVGNKVDR
Sbjct: 121 HECIKILVGNKVDR 134

[Close]

BLAST of Cucsat.G15014 vs. ExPASy TrEMBL
Match: A0A6J1GLE8 (ras-related protein RABC2a-like OS=Cucurbita moschata OX=3662 GN=LOC111455431 PE=4 SV=1)

HSP 1 Score: 253 bits (645), Expect = 1.55e-83
Identity = 125/134 (93.28%), Postives = 129/134 (96.27%), Query Frame = 0


Query: 1   MMGSSSKGRCISYDYSFKILLIGDSGVGKSSILLSYISNFVHDLSPTIGVDFKIKMVTVG 60
           MMGSSSK R  SYDYSFKILLIGDSGVGKSSILLSYISNFV DLSPTIGVDFKIKMVTVG
Sbjct: 1   MMGSSSKARSSSYDYSFKILLIGDSGVGKSSILLSYISNFVQDLSPTIGVDFKIKMVTVG 60

Query: 61  GKKLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLINVWAKEVELYLTN 120
           GK+LKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNL++VWAKEVE+YLTN
Sbjct: 61  GKRLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLMDVWAKEVEMYLTN 120

Query: 121 RECIKILVGNKVDR 134
            ECIKILVGNKVDR
Sbjct: 121 HECIKILVGNKVDR 134

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BLAST of Cucsat.G15014 vs. ExPASy TrEMBL
Match: A0A6J1JMZ9 (ras-related protein RABC2a-like OS=Cucurbita maxima OX=3661 GN=LOC111487310 PE=4 SV=1)

HSP 1 Score: 252 bits (644), Expect = 2.20e-83
Identity = 125/134 (93.28%), Postives = 128/134 (95.52%), Query Frame = 0


Query: 1   MMGSSSKGRCISYDYSFKILLIGDSGVGKSSILLSYISNFVHDLSPTIGVDFKIKMVTVG 60
           MMGSSSK R  SYDYSFKILLIGDSGVGKSSILLSYISNFV DLSPTIGVDFKIKMVTVG
Sbjct: 1   MMGSSSKARSSSYDYSFKILLIGDSGVGKSSILLSYISNFVQDLSPTIGVDFKIKMVTVG 60

Query: 61  GKKLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLINVWAKEVELYLTN 120
           GK+LKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNL+ VWAKEVE+YLTN
Sbjct: 61  GKRLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLMGVWAKEVEMYLTN 120

Query: 121 RECIKILVGNKVDR 134
            ECIKILVGNKVDR
Sbjct: 121 HECIKILVGNKVDR 134

The following BLAST results are available for this feature:

BLAST of Cucsat.G15014 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O49841	3.5e-54	79.70	Ras-related protein RABC2a OS=Arabidopsis thaliana OX=3702 GN=RABC2A PE=1 SV=1	[more]
O23657	8.2e-51	73.68	Ras-related protein RABC1 OS=Arabidopsis thaliana OX=3702 GN=RABC1 PE=1 SV=1	[more]
Q9SF92	1.4e-50	75.94	Ras-related protein RABC2b OS=Arabidopsis thaliana OX=3702 GN=RABC2B PE=2 SV=1	[more]
P36862	3.0e-37	62.60	GTP-binding protein yptV3 OS=Volvox carteri OX=3067 GN=YPTV3 PE=3 SV=1	[more]
Q5ZLG1	1.3e-35	61.67	Ras-related protein Rab-18 OS=Gallus gallus OX=9031 GN=RAB18 PE=2 SV=1	[more]

BLAST of Cucsat.G15014 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004150373.1	1.68e-90	100.00	ras-related protein RABC2a [Cucumis sativus] >KGN62197.1 hypothetical protein Cs...	[more]
XP_008456546.1	6.82e-90	98.51	PREDICTED: ras-related protein RABC2a-like [Cucumis melo]	[more]
XP_038885704.1	1.23e-87	96.27	ras-related protein RABC2a-like [Benincasa hispida]	[more]
XP_022133444.1	9.60e-85	94.03	ras-related protein RABC2a-like [Momordica charantia]	[more]
XP_022952871.1	3.20e-83	93.28	ras-related protein RABC2a-like [Cucurbita moschata] >XP_022952881.1 ras-related...	[more]

BLAST of Cucsat.G15014 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LN27	8.12e-91	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G326500 PE=4 SV=1	[more]
A0A1S3C3K9	3.30e-90	98.51	ras-related protein RABC2a-like OS=Cucumis melo OX=3656 GN=LOC103496466 PE=4 SV=...	[more]
A0A6J1BW00	4.65e-85	94.03	ras-related protein RABC2a-like OS=Momordica charantia OX=3673 GN=LOC111006017 P...	[more]
A0A6J1GLE8	1.55e-83	93.28	ras-related protein RABC2a-like OS=Cucurbita moschata OX=3662 GN=LOC111455431 PE...	[more]
A0A6J1JMZ9	2.20e-83	93.28	ras-related protein RABC2a-like OS=Cucurbita maxima OX=3661 GN=LOC111487310 PE=4...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00449	RASTRNSFRMNG	coord: 66..79 score: 42.24 coord: 101..123 score: 34.38 coord: 2..24 score: 50.88
None	No IPR available	SMART	SM00173	ras_sub_4	coord: 2..126 e-value: 3.9E-10 score: 28.4
None	No IPR available	SMART	SM00175	rab_sub_5	coord: 1..126 e-value: 6.1E-47 score: 171.9
None	No IPR available	PANTHER	PTHR24073	DRAB5-RELATED	coord: 1..159
None	No IPR available	PANTHER	PTHR24073:SF643	SMALL GTPASE SUPERFAMILY, P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASE-RELATED	coord: 1..159
None	No IPR available	PROSITE	PS51419	RAB	coord: 1..159 score: 23.580019
IPR001806	Small GTPase	SMART	SM00174	rho_sub_3	coord: 2..126 e-value: 3.1E-8 score: -13.0
IPR001806	Small GTPase	PFAM	PF00071	Ras	coord: 2..124 e-value: 5.6E-38 score: 130.1
IPR001806	Small GTPase	PROSITE	PS51421	RAS	coord: 1..160 score: 14.01718
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 1..157 e-value: 1.8E-44 score: 153.4
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 2..159
IPR005225	Small GTP-binding protein domain	TIGRFAM	TIGR00231	TIGR00231	coord: 2..119 e-value: 2.2E-19 score: 67.8

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsat.G15014.T1	Cucsat.G15014.T1	mRNA
Cucsat.G15014.T3	Cucsat.G15014.T3	mRNA
Cucsat.G15014.T4	Cucsat.G15014.T4	mRNA
Cucsat.G15014.T2	Cucsat.G15014.T2	mRNA
Cucsat.G15014.T6	Cucsat.G15014.T6	mRNA
Cucsat.G15014.T5	Cucsat.G15014.T5	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006886	intracellular protein transport
cellular_component	GO:0012505	endomembrane system
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding