Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCTTCACCCATCGCTGTTCTTGCTCTACTGCTCATCTTTCAATCTGCGAACGCTAATGATTTCGGTTAGTTTTTCCCCCTTTCTGCTATTTTCATGGCTGTTCTTTCTAGGGTTACTTCAGATTTTTCATTTCTGTTCTTATACACCTTTTTATTCTGTGGCTTTTGCTGAAATGGATTGGTAACTTTTTTTGATAACTTGATTGGAAAGGACAGAGTGTTTGTTCTTGTTTTGATTGAATTGATAATGGCTGAAAATGTCTGCAAGGAAGTGAACTATGGATGAGAAACCTGTAAAGATTCTAGTAATGGGAGTTTCTTGTTTGAATGTGATAGCAGTTCTGGGCGGAAGCAGGCTCTTTCTGATCATGATGATAGTGACTGCTTCCAAGTTTCTCCTCTTCATTATACCCAAATGGAAGATTCCTTTCTCTTTCTCTATCTCCTATGAAGCTTTTCTGTGAAAAATAGCTGTGTTTTTAGCCATAGTTGCTATTTCATCTGCTTGCTGCAATTCATAGCTGTTTGATTCTGCCAAATGGGACTTGTTTTTTGGTTGATGAATGTATTTGCCAAAAGTTACTGCAGAGGTGGCTTGTAAGATGTAGATTTAGGCCGTCGCAATCGCATTTTCGTAGCAGCGGATTTGGCGATTGTGCGGCACTCACTCTCAGTACCAAGTGAGTCAAGCCAACTTAGGATTGTATCGCCTATGGTCGAGCAATGTATGCTCAAGCCTTTGTCCCCATTTTGAGAAAACGGGCCAGAGAGATACTGAAAACAATGTTACATGACTACAAGCAAAAAGCAATACAATGGCTTAAATAATATATAACTTTCTGGTCTGGGAGAATTTAACAACTAGTCGCATCCCTCGCCTAAACGTGATTTTGCTGAACGGTCATACAAAATCTAGGTGGGAGGAGTTGACGACTGGTCGCATTTCCCTATAGTACATTCTAGGGTATTTAATGTCTACCCGGCGTAGATATGATTACGTCGAAACGTCATACACTTACAAAAGACAAGAAGGAAATTATACTTCATGATACGAGGCTAGAGTTTTGGCATGTAACGAGCATGTGGCCATAGGCAACACACCGTGGACAAACATTACCGTGACAATGTGCTTCATTTGAAAGAAAAAAGTACTAAATTTATATGAATACTAAACATTTGAATTCTAATCTTAGACTACCCATTTCAAAATCGATATTACGTGACGGTCAGACAAGATTGTGGTTATAGGCGACACGAAAATTTAACGGTGAAGTTGGCCAAAGATATGAAACACATCAACAATGCTTATAGCTAAGGTTGCAGCTATGAACCAAGATGTCTTCGAAACTCAATGTGCAGATGATAAAGGCCCTGTTGGATTTAACTTATTTGGATGAGTACATATTTCATCATATTCAAGGTTCTATGGGTCTTGATCTTGATTATTATGTTCATATATCTGATGGTGCTAGAATTGAACATCTCACTGCTTTGAACAATGCTGATAGGCATTAGATTTTTACCGTTGATGCCACGTAATCTGACTCACCCGGTGCTTTTCGACCCCTCCATCGGGCGTACAGACTTAACCAAGAACTAATGAATCGATATTCGTTTGTAATGACCAATTCTATGTTTTTGGTGAATATGAAAGCTTATTTACTTGATGTCTTTCTTGTTGCTGTATAGCTTGTCGATGGGTCGACTGTGGAGGCGGTTCGTGCAACAAGATGTCGCGGTTGGCATACAAATGTGATTGTTTGAAGGGCTAACACTGCCTTTCCATGCTTATTCTGAGTTGTGTTTGATACTCAATTTGAAGGCTCAATGAGTATGGATTCCAAGGACCCTTCTGCTACAAATAACAATAATGGTTAGTCATTTCAACTACTAACTTTTTCCTGGTTGAATCTTGTATTTTCTCCACTATACAGTCGATTTAACCTTGTCACGAACATAACTAGAAACGAAACGAGCTTTGCCAACGCGTAACAGCTTAAGCCCACCACTAGCGGGCTTTCCTTTTTGTGCTGTTTTAAAAAGCGTCTAGTAGAGAGAGGTTTCCACACCCTTATAAGCAATGTTTCGTTTTTTTCTCCGATCGATGTGGGATCTCATAATCCACCCTTCTTAGGGGGACAGTGTCCTCACTAGCACATCGATTGGTGACTGGCTCTGATATCATTTATAATAACCCCAAACCCACCACTAGCAGATCCTTTCCAGGCTTGCCCGCAAAGTTTTAAAACGTGTCTAGTAGGGAGAGGTTTTCATCCCCTTATAACCAATGCTTCGTTCTTTTGTAAAACTAGAATTATATTGACATTCATTCAAACTACTTTGATCTACAGCTGCTAGCAGATTATTTCTCATCGAGGTTCGCTCGATGATAACATATGTAGCTACGCTGCTGCTGCTGAACAAATAG
mRNA sequence
ATGCCTTCACCCATCGCTGTTCTTGCTCTACTGCTCATCTTTCAATCTGCGAACGCTAATGATTTCGCTTGTCGATGGGTCGACTGTGGAGGCGGTTCGTGCAACAAGATGTCGCGGTTGGCATACAAATGCTCAATGAGTATGGATTCCAAGGACCCTTCTGCTACAAATAACAATAATGCTGCTAGCAGATTATTTCTCATCGAGGTTCGCTCGATGATAACATATGTAGCTACGCTGCTGCTGCTGAACAAATAG
Coding sequence (CDS)
ATGCCTTCACCCATCGCTGTTCTTGCTCTACTGCTCATCTTTCAATCTGCGAACGCTAATGATTTCGCTTGTCGATGGGTCGACTGTGGAGGCGGTTCGTGCAACAAGATGTCGCGGTTGGCATACAAATGCTCAATGAGTATGGATTCCAAGGACCCTTCTGCTACAAATAACAATAATGCTGCTAGCAGATTATTTCTCATCGAGGTTCGCTCGATGATAACATATGTAGCTACGCTGCTGCTGCTGAACAAATAG
Protein sequence
MPSPIAVLALLLIFQSANANDFACRWVDCGGGSCNKMSRLAYKCSMSMDSKDPSATNNNNAASRLFLIEVRSMITYVATLLLLNK
Homology
BLAST of Csor.00g258660.m01 vs. NCBI nr
Match:
KAG6574964.1 (hypothetical protein SDJN03_25603, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 169 bits (429), Expect = 5.50e-53
Identity = 85/85 (100.00%), Postives = 85/85 (100.00%), Query Frame = 0
Query: 1 MPSPIAVLALLLIFQSANANDFACRWVDCGGGSCNKMSRLAYKCSMSMDSKDPSATNNNN 60
MPSPIAVLALLLIFQSANANDFACRWVDCGGGSCNKMSRLAYKCSMSMDSKDPSATNNNN
Sbjct: 1 MPSPIAVLALLLIFQSANANDFACRWVDCGGGSCNKMSRLAYKCSMSMDSKDPSATNNNN 60
Query: 61 AASRLFLIEVRSMITYVATLLLLNK 85
AASRLFLIEVRSMITYVATLLLLNK
Sbjct: 61 AASRLFLIEVRSMITYVATLLLLNK 85
BLAST of Csor.00g258660.m01 vs. NCBI nr
Match:
TYK30143.1 (vitamin K-dependent protein S-like [Cucumis melo var. makuwa])
HSP 1 Score: 58.5 bits (140), Expect = 7.15e-08
Identity = 40/101 (39.60%), Postives = 48/101 (47.52%), Query Frame = 0
Query: 24 CRWVDCGGGSCNKMSRLAYKC---------------------SMSMDSKD---------- 83
C WVDCGGG CNK S L YKC S+ MD K+
Sbjct: 131 CSWVDCGGGLCNKTSPLTYKCNCLEGYYNLLNITAFPCYKDCSIGMDCKELGIPVTNSPA 190
Query: 84 ---PSATNNNNAASRLFLIE-----VRSMITYVATLLLLNK 85
++T NNNAASRLFL + S++ Y+ATLLLL K
Sbjct: 191 STTSTSTTNNNAASRLFLKRGSLSTISSVVMYIATLLLLIK 231
BLAST of Csor.00g258660.m01 vs. NCBI nr
Match:
XP_008449322.1 (PREDICTED: uncharacterized protein LOC103491235 [Cucumis melo])
HSP 1 Score: 58.5 bits (140), Expect = 9.32e-08
Identity = 40/101 (39.60%), Postives = 48/101 (47.52%), Query Frame = 0
Query: 24 CRWVDCGGGSCNKMSRLAYKC---------------------SMSMDSKD---------- 83
C WVDCGGG CNK S L YKC S+ MD K+
Sbjct: 166 CSWVDCGGGLCNKTSPLTYKCNCLEGYYNLLNITAFPCYKDCSIGMDCKELGIPVTNSPA 225
Query: 84 ---PSATNNNNAASRLFLIE-----VRSMITYVATLLLLNK 85
++T NNNAASRLFL + S++ Y+ATLLLL K
Sbjct: 226 STTSTSTTNNNAASRLFLKRGSLSTISSVVMYIATLLLLIK 266
BLAST of Csor.00g258660.m01 vs. NCBI nr
Match:
XP_004145389.1 (neurogenic locus notch homolog protein 1 [Cucumis sativus] >KGN61669.1 hypothetical protein Csa_006025 [Cucumis sativus])
HSP 1 Score: 58.2 bits (139), Expect = 1.02e-07
Identity = 41/100 (41.00%), Postives = 47/100 (47.00%), Query Frame = 0
Query: 24 CRWVDCGGGSCNKMSRLAYKC---------------------SMSMDSKD---------- 83
C WVDCGGG CNK S L YKC S+ MD K+
Sbjct: 133 CSWVDCGGGLCNKTSPLTYKCNCLEGYYNLLNITAFPCYKDCSIGMDCKELGIPVTNSPA 192
BLAST of Csor.00g258660.m01 vs. NCBI nr
Match:
KAG7013533.1 (hypothetical protein SDJN02_23699, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 55.1 bits (131), Expect = 1.20e-07
Identity = 22/22 (100.00%), Postives = 22/22 (100.00%), Query Frame = 0
Query: 23 ACRWVDCGGGSCNKMSRLAYKC 44
ACRWVDCGGGSCNKMSRLAYKC
Sbjct: 55 ACRWVDCGGGSCNKMSRLAYKC 76
BLAST of Csor.00g258660.m01 vs. ExPASy TrEMBL
Match:
A0A5D3E219 (Vitamin K-dependent protein S-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold216G001270 PE=4 SV=1)
HSP 1 Score: 58.5 bits (140), Expect = 3.46e-08
Identity = 40/101 (39.60%), Postives = 48/101 (47.52%), Query Frame = 0
Query: 24 CRWVDCGGGSCNKMSRLAYKC---------------------SMSMDSKD---------- 83
C WVDCGGG CNK S L YKC S+ MD K+
Sbjct: 131 CSWVDCGGGLCNKTSPLTYKCNCLEGYYNLLNITAFPCYKDCSIGMDCKELGIPVTNSPA 190
Query: 84 ---PSATNNNNAASRLFLIE-----VRSMITYVATLLLLNK 85
++T NNNAASRLFL + S++ Y+ATLLLL K
Sbjct: 191 STTSTSTTNNNAASRLFLKRGSLSTISSVVMYIATLLLLIK 231
BLAST of Csor.00g258660.m01 vs. ExPASy TrEMBL
Match:
A0A1S3BLS9 (uncharacterized protein LOC103491235 OS=Cucumis melo OX=3656 GN=LOC103491235 PE=4 SV=1)
HSP 1 Score: 58.5 bits (140), Expect = 4.51e-08
Identity = 40/101 (39.60%), Postives = 48/101 (47.52%), Query Frame = 0
Query: 24 CRWVDCGGGSCNKMSRLAYKC---------------------SMSMDSKD---------- 83
C WVDCGGG CNK S L YKC S+ MD K+
Sbjct: 166 CSWVDCGGGLCNKTSPLTYKCNCLEGYYNLLNITAFPCYKDCSIGMDCKELGIPVTNSPA 225
Query: 84 ---PSATNNNNAASRLFLIE-----VRSMITYVATLLLLNK 85
++T NNNAASRLFL + S++ Y+ATLLLL K
Sbjct: 226 STTSTSTTNNNAASRLFLKRGSLSTISSVVMYIATLLLLIK 266
BLAST of Csor.00g258660.m01 vs. ExPASy TrEMBL
Match:
A0A0A0LKT4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G222120 PE=4 SV=1)
HSP 1 Score: 58.2 bits (139), Expect = 4.94e-08
Identity = 41/100 (41.00%), Postives = 47/100 (47.00%), Query Frame = 0
Query: 24 CRWVDCGGGSCNKMSRLAYKC---------------------SMSMDSKD---------- 83
C WVDCGGG CNK S L YKC S+ MD K+
Sbjct: 133 CSWVDCGGGLCNKTSPLTYKCNCLEGYYNLLNITAFPCYKDCSIGMDCKELGIPVTNSPA 192
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
KAG6574964.1 | 5.50e-53 | 100.00 | hypothetical protein SDJN03_25603, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
TYK30143.1 | 7.15e-08 | 39.60 | vitamin K-dependent protein S-like [Cucumis melo var. makuwa] | [more] |
XP_008449322.1 | 9.32e-08 | 39.60 | PREDICTED: uncharacterized protein LOC103491235 [Cucumis melo] | [more] |
XP_004145389.1 | 1.02e-07 | 41.00 | neurogenic locus notch homolog protein 1 [Cucumis sativus] >KGN61669.1 hypotheti... | [more] |
KAG7013533.1 | 1.20e-07 | 100.00 | hypothetical protein SDJN02_23699, partial [Cucurbita argyrosperma subsp. argyro... | [more] |
Match Name | E-value | Identity | Description | |
A0A5D3E219 | 3.46e-08 | 39.60 | Vitamin K-dependent protein S-like OS=Cucumis melo var. makuwa OX=1194695 GN=E56... | [more] |
A0A1S3BLS9 | 4.51e-08 | 39.60 | uncharacterized protein LOC103491235 OS=Cucumis melo OX=3656 GN=LOC103491235 PE=... | [more] |
A0A0A0LKT4 | 4.94e-08 | 41.00 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G222120 PE=4 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
Feature Name | Unique Name | Type |
Csor.00g258660.m01.CDS01 | Csor.00g258660.m01.CDS01 | CDS |
Csor.00g258660.m01.CDS02 | Csor.00g258660.m01.CDS02 | CDS |
Csor.00g258660.m01.CDS03 | Csor.00g258660.m01.CDS03 | CDS |
Csor.00g258660.m01.CDS04 | Csor.00g258660.m01.CDS04 | CDS |
The following stop_codon feature(s) are a part of this mRNA:
Feature Name | Unique Name | Type |
Csor.00g258660.m01.stop_codon01 | Csor.00g258660.m01.stop_codon01 | stop_codon |
The following terminal feature(s) are a part of this mRNA:
Feature Name | Unique Name | Type |
Csor.00g258660.m01.terminal01 | Csor.00g258660.m01.terminal01 | terminal |
The following intron feature(s) are a part of this mRNA:
Feature Name | Unique Name | Type |
Csor.00g258660.m01.intron01 | Csor.00g258660.m01.intron01 | intron |
Csor.00g258660.m01.intron02 | Csor.00g258660.m01.intron02 | intron |
Csor.00g258660.m01.intron03 | Csor.00g258660.m01.intron03 | intron |
The following internal feature(s) are a part of this mRNA:
Feature Name | Unique Name | Type |
Csor.00g258660.m01.internal01 | Csor.00g258660.m01.internal01 | internal |
Csor.00g258660.m01.internal02 | Csor.00g258660.m01.internal02 | internal |
The following initial feature(s) are a part of this mRNA:
Feature Name | Unique Name | Type |
Csor.00g258660.m01.initial01 | Csor.00g258660.m01.initial01 | initial |
The following start_codon feature(s) are a part of this mRNA:
Feature Name | Unique Name | Type |
Csor.00g258660.m01.start_codon01 | Csor.00g258660.m01.start_codon01 | start_codon |
The following polypeptide feature(s) derives from this mRNA:
Feature Name | Unique Name | Type |
Csor.00g258660.m01 | Csor.00g258660.m01-protein | polypeptide |