Csor.00g258660 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g258660
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionVitamin K-dependent protein S-like
LocationCsor_Chr17: 1147542 .. 1149971 (-)
RNA-Seq ExpressionCsor.00g258660
SyntenyCsor.00g258660
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCTTCACCCATCGCTGTTCTTGCTCTACTGCTCATCTTTCAATCTGCGAACGCTAATGATTTCGGTTAGTTTTTCCCCCTTTCTGCTATTTTCATGGCTGTTCTTTCTAGGGTTACTTCAGATTTTTCATTTCTGTTCTTATACACCTTTTTATTCTGTGGCTTTTGCTGAAATGGATTGGTAACTTTTTTTGATAACTTGATTGGAAAGGACAGAGTGTTTGTTCTTGTTTTGATTGAATTGATAATGGCTGAAAATGTCTGCAAGGAAGTGAACTATGGATGAGAAACCTGTAAAGATTCTAGTAATGGGAGTTTCTTGTTTGAATGTGATAGCAGTTCTGGGCGGAAGCAGGCTCTTTCTGATCATGATGATAGTGACTGCTTCCAAGTTTCTCCTCTTCATTATACCCAAATGGAAGATTCCTTTCTCTTTCTCTATCTCCTATGAAGCTTTTCTGTGAAAAATAGCTGTGTTTTTAGCCATAGTTGCTATTTCATCTGCTTGCTGCAATTCATAGCTGTTTGATTCTGCCAAATGGGACTTGTTTTTTGGTTGATGAATGTATTTGCCAAAAGTTACTGCAGAGGTGGCTTGTAAGATGTAGATTTAGGCCGTCGCAATCGCATTTTCGTAGCAGCGGATTTGGCGATTGTGCGGCACTCACTCTCAGTACCAAGTGAGTCAAGCCAACTTAGGATTGTATCGCCTATGGTCGAGCAATGTATGCTCAAGCCTTTGTCCCCATTTTGAGAAAACGGGCCAGAGAGATACTGAAAACAATGTTACATGACTACAAGCAAAAAGCAATACAATGGCTTAAATAATATATAACTTTCTGGTCTGGGAGAATTTAACAACTAGTCGCATCCCTCGCCTAAACGTGATTTTGCTGAACGGTCATACAAAATCTAGGTGGGAGGAGTTGACGACTGGTCGCATTTCCCTATAGTACATTCTAGGGTATTTAATGTCTACCCGGCGTAGATATGATTACGTCGAAACGTCATACACTTACAAAAGACAAGAAGGAAATTATACTTCATGATACGAGGCTAGAGTTTTGGCATGTAACGAGCATGTGGCCATAGGCAACACACCGTGGACAAACATTACCGTGACAATGTGCTTCATTTGAAAGAAAAAAGTACTAAATTTATATGAATACTAAACATTTGAATTCTAATCTTAGACTACCCATTTCAAAATCGATATTACGTGACGGTCAGACAAGATTGTGGTTATAGGCGACACGAAAATTTAACGGTGAAGTTGGCCAAAGATATGAAACACATCAACAATGCTTATAGCTAAGGTTGCAGCTATGAACCAAGATGTCTTCGAAACTCAATGTGCAGATGATAAAGGCCCTGTTGGATTTAACTTATTTGGATGAGTACATATTTCATCATATTCAAGGTTCTATGGGTCTTGATCTTGATTATTATGTTCATATATCTGATGGTGCTAGAATTGAACATCTCACTGCTTTGAACAATGCTGATAGGCATTAGATTTTTACCGTTGATGCCACGTAATCTGACTCACCCGGTGCTTTTCGACCCCTCCATCGGGCGTACAGACTTAACCAAGAACTAATGAATCGATATTCGTTTGTAATGACCAATTCTATGTTTTTGGTGAATATGAAAGCTTATTTACTTGATGTCTTTCTTGTTGCTGTATAGCTTGTCGATGGGTCGACTGTGGAGGCGGTTCGTGCAACAAGATGTCGCGGTTGGCATACAAATGTGATTGTTTGAAGGGCTAACACTGCCTTTCCATGCTTATTCTGAGTTGTGTTTGATACTCAATTTGAAGGCTCAATGAGTATGGATTCCAAGGACCCTTCTGCTACAAATAACAATAATGGTTAGTCATTTCAACTACTAACTTTTTCCTGGTTGAATCTTGTATTTTCTCCACTATACAGTCGATTTAACCTTGTCACGAACATAACTAGAAACGAAACGAGCTTTGCCAACGCGTAACAGCTTAAGCCCACCACTAGCGGGCTTTCCTTTTTGTGCTGTTTTAAAAAGCGTCTAGTAGAGAGAGGTTTCCACACCCTTATAAGCAATGTTTCGTTTTTTTCTCCGATCGATGTGGGATCTCATAATCCACCCTTCTTAGGGGGACAGTGTCCTCACTAGCACATCGATTGGTGACTGGCTCTGATATCATTTATAATAACCCCAAACCCACCACTAGCAGATCCTTTCCAGGCTTGCCCGCAAAGTTTTAAAACGTGTCTAGTAGGGAGAGGTTTTCATCCCCTTATAACCAATGCTTCGTTCTTTTGTAAAACTAGAATTATATTGACATTCATTCAAACTACTTTGATCTACAGCTGCTAGCAGATTATTTCTCATCGAGGTTCGCTCGATGATAACATATGTAGCTACGCTGCTGCTGCTGAACAAATAG

mRNA sequence

ATGCCTTCACCCATCGCTGTTCTTGCTCTACTGCTCATCTTTCAATCTGCGAACGCTAATGATTTCGCTTGTCGATGGGTCGACTGTGGAGGCGGTTCGTGCAACAAGATGTCGCGGTTGGCATACAAATGCTCAATGAGTATGGATTCCAAGGACCCTTCTGCTACAAATAACAATAATGCTGCTAGCAGATTATTTCTCATCGAGGTTCGCTCGATGATAACATATGTAGCTACGCTGCTGCTGCTGAACAAATAG

Coding sequence (CDS)

ATGCCTTCACCCATCGCTGTTCTTGCTCTACTGCTCATCTTTCAATCTGCGAACGCTAATGATTTCGCTTGTCGATGGGTCGACTGTGGAGGCGGTTCGTGCAACAAGATGTCGCGGTTGGCATACAAATGCTCAATGAGTATGGATTCCAAGGACCCTTCTGCTACAAATAACAATAATGCTGCTAGCAGATTATTTCTCATCGAGGTTCGCTCGATGATAACATATGTAGCTACGCTGCTGCTGCTGAACAAATAG

Protein sequence

MPSPIAVLALLLIFQSANANDFACRWVDCGGGSCNKMSRLAYKCSMSMDSKDPSATNNNNAASRLFLIEVRSMITYVATLLLLNK
Homology
[Close]
BLAST of Csor.00g258660 vs. NCBI nr
Match: KAG6574964.1 (hypothetical protein SDJN03_25603, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 169 bits (429), Expect = 5.50e-53
Identity = 85/85 (100.00%), Postives = 85/85 (100.00%), Query Frame = 0 

Query: 1  MPSPIAVLALLLIFQSANANDFACRWVDCGGGSCNKMSRLAYKCSMSMDSKDPSATNNNN 60
          MPSPIAVLALLLIFQSANANDFACRWVDCGGGSCNKMSRLAYKCSMSMDSKDPSATNNNN
Sbjct: 1  MPSPIAVLALLLIFQSANANDFACRWVDCGGGSCNKMSRLAYKCSMSMDSKDPSATNNNN 60

Query: 61 AASRLFLIEVRSMITYVATLLLLNK 85
          AASRLFLIEVRSMITYVATLLLLNK
Sbjct: 61 AASRLFLIEVRSMITYVATLLLLNK 85

[Close]
BLAST of Csor.00g258660 vs. NCBI nr
Match: TYK30143.1 (vitamin K-dependent protein S-like [Cucumis melo var. makuwa])

HSP 1 Score: 58.5 bits (140), Expect = 7.15e-08
Identity = 40/101 (39.60%), Postives = 48/101 (47.52%), Query Frame = 0 

Query: 24  CRWVDCGGGSCNKMSRLAYKC---------------------SMSMDSKD---------- 83
           C WVDCGGG CNK S L YKC                     S+ MD K+          
Sbjct: 131 CSWVDCGGGLCNKTSPLTYKCNCLEGYYNLLNITAFPCYKDCSIGMDCKELGIPVTNSPA 190

Query: 84  ---PSATNNNNAASRLFLIE-----VRSMITYVATLLLLNK 85
               ++T NNNAASRLFL       + S++ Y+ATLLLL K
Sbjct: 191 STTSTSTTNNNAASRLFLKRGSLSTISSVVMYIATLLLLIK 231

[Close]
BLAST of Csor.00g258660 vs. NCBI nr
Match: XP_008449322.1 (PREDICTED: uncharacterized protein LOC103491235 [Cucumis melo])

HSP 1 Score: 58.5 bits (140), Expect = 9.32e-08
Identity = 40/101 (39.60%), Postives = 48/101 (47.52%), Query Frame = 0 

Query: 24  CRWVDCGGGSCNKMSRLAYKC---------------------SMSMDSKD---------- 83
           C WVDCGGG CNK S L YKC                     S+ MD K+          
Sbjct: 166 CSWVDCGGGLCNKTSPLTYKCNCLEGYYNLLNITAFPCYKDCSIGMDCKELGIPVTNSPA 225

Query: 84  ---PSATNNNNAASRLFLIE-----VRSMITYVATLLLLNK 85
               ++T NNNAASRLFL       + S++ Y+ATLLLL K
Sbjct: 226 STTSTSTTNNNAASRLFLKRGSLSTISSVVMYIATLLLLIK 266

[Close]
BLAST of Csor.00g258660 vs. NCBI nr
Match: XP_004145389.1 (neurogenic locus notch homolog protein 1 [Cucumis sativus] >KGN61669.1 hypothetical protein Csa_006025 [Cucumis sativus])

HSP 1 Score: 58.2 bits (139), Expect = 1.02e-07
Identity = 41/100 (41.00%), Postives = 47/100 (47.00%), Query Frame = 0 

Query: 24  CRWVDCGGGSCNKMSRLAYKC---------------------SMSMDSKD---------- 83
           C WVDCGGG CNK S L YKC                     S+ MD K+          
Sbjct: 133 CSWVDCGGGLCNKTSPLTYKCNCLEGYYNLLNITAFPCYKDCSIGMDCKELGIPVTNSPA 192

[Close]
BLAST of Csor.00g258660 vs. NCBI nr
Match: KAG7013533.1 (hypothetical protein SDJN02_23699, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 55.1 bits (131), Expect = 1.20e-07
Identity = 22/22 (100.00%), Postives = 22/22 (100.00%), Query Frame = 0 

Query: 23 ACRWVDCGGGSCNKMSRLAYKC 44
          ACRWVDCGGGSCNKMSRLAYKC
Sbjct: 55 ACRWVDCGGGSCNKMSRLAYKC 76

[Close]
BLAST of Csor.00g258660 vs. ExPASy TrEMBL
Match: A0A5D3E219 (Vitamin K-dependent protein S-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold216G001270 PE=4 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 3.46e-08
Identity = 40/101 (39.60%), Postives = 48/101 (47.52%), Query Frame = 0 

Query: 24  CRWVDCGGGSCNKMSRLAYKC---------------------SMSMDSKD---------- 83
           C WVDCGGG CNK S L YKC                     S+ MD K+          
Sbjct: 131 CSWVDCGGGLCNKTSPLTYKCNCLEGYYNLLNITAFPCYKDCSIGMDCKELGIPVTNSPA 190

Query: 84  ---PSATNNNNAASRLFLIE-----VRSMITYVATLLLLNK 85
               ++T NNNAASRLFL       + S++ Y+ATLLLL K
Sbjct: 191 STTSTSTTNNNAASRLFLKRGSLSTISSVVMYIATLLLLIK 231

[Close]
BLAST of Csor.00g258660 vs. ExPASy TrEMBL
Match: A0A1S3BLS9 (uncharacterized protein LOC103491235 OS=Cucumis melo OX=3656 GN=LOC103491235 PE=4 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 4.51e-08
Identity = 40/101 (39.60%), Postives = 48/101 (47.52%), Query Frame = 0 

Query: 24  CRWVDCGGGSCNKMSRLAYKC---------------------SMSMDSKD---------- 83
           C WVDCGGG CNK S L YKC                     S+ MD K+          
Sbjct: 166 CSWVDCGGGLCNKTSPLTYKCNCLEGYYNLLNITAFPCYKDCSIGMDCKELGIPVTNSPA 225

Query: 84  ---PSATNNNNAASRLFLIE-----VRSMITYVATLLLLNK 85
               ++T NNNAASRLFL       + S++ Y+ATLLLL K
Sbjct: 226 STTSTSTTNNNAASRLFLKRGSLSTISSVVMYIATLLLLIK 266

[Close]
BLAST of Csor.00g258660 vs. ExPASy TrEMBL
Match: A0A0A0LKT4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G222120 PE=4 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 4.94e-08
Identity = 41/100 (41.00%), Postives = 47/100 (47.00%), Query Frame = 0 

Query: 24  CRWVDCGGGSCNKMSRLAYKC---------------------SMSMDSKD---------- 83
           C WVDCGGG CNK S L YKC                     S+ MD K+          
Sbjct: 133 CSWVDCGGGLCNKTSPLTYKCNCLEGYYNLLNITAFPCYKDCSIGMDCKELGIPVTNSPA 192

The following BLAST results are available for this feature:
BLAST of Csor.00g258660 vs.
Match NameE-valueIdentityDescription
BLAST of Csor.00g258660 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6574964.15.50e-53100.00hypothetical protein SDJN03_25603, partial [Cucurbita argyrosperma subsp. sorori... [more]
TYK30143.17.15e-0839.60vitamin K-dependent protein S-like [Cucumis melo var. makuwa][more]
XP_008449322.19.32e-0839.60PREDICTED: uncharacterized protein LOC103491235 [Cucumis melo][more]
XP_004145389.11.02e-0741.00neurogenic locus notch homolog protein 1 [Cucumis sativus] >KGN61669.1 hypotheti... [more]
KAG7013533.11.20e-07100.00hypothetical protein SDJN02_23699, partial [Cucurbita argyrosperma subsp. argyro... [more]
BLAST of Csor.00g258660 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3E2193.46e-0839.60Vitamin K-dependent protein S-like OS=Cucumis melo var. makuwa OX=1194695 GN=E56... [more]
A0A1S3BLS94.51e-0839.60uncharacterized protein LOC103491235 OS=Cucumis melo OX=3656 GN=LOC103491235 PE=... [more]
A0A0A0LKT44.94e-0841.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G222120 PE=4 SV=1[more]
BLAST of Csor.00g258660 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g258660.m01Csor.00g258660.m01mRNA