CsGy1G030722.1 (mRNA) Cucumber (Gy14) v2.1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGACTGAAGAAGAAAATTGGAAAGAAATGGATGAGGATCGTGATGGAGGAAACGGTGAAAGAGATGACAGATTGGTGAATGAGGGAGAAGATGGTAATACAGAAAATATAAATATGGATGAAGAAGGGGATAGAACTACAATAGTAAATTGTGAAAATGAAGCTGCAAGGGTATGATGTTATGACTAATATATGTATTGTTATTATTTTTTGAAACATGTATGTATATATTTAGTATTGTGTATGTATTTAGTATTTTGTATGTATTCTTGATTGACAGGATGGACAGAATGAGAGCTTAGATGACATGGTATACAATACAGCTCTACTAAAGGAAGTAGAACAAATAGAAAAAGAAGCACTGAAAATGAAGGTTATTACATTTCTTAAATCATTTATGTATTAGTGATTTTATAAATTAAAACATAAACTGAAAATGAAGTATATAATGTTTGTTGCAGACCAAGAAATTGGAGAAAAGACATATTAATCAAAGAGGAGCTGTGAAAAATAAAACAGTAAAGGTATGTATAAGAAAAATGTTCGAAATATATGACATATTATTATCTATATATCATAATATTTTTGAAATGATTAATTAGGTAAGAGAAAGTGATATTTTTGCTTACAATCAATCAGTGAGTGAGGAGCCTAAGGAGAGGAAATCATCCATAAAAAATATTTAG ATGACTGAAGAAGAAAATTGGAAAGAAATGGATGAGGATCGTGATGGAGGAAACGGTGAAAGAGATGACAGATTGGTGAATGAGGGAGAAGATGGTAATACAGAAAATATAAATATGGATGAAGAAGGGGATAGAACTACAATAGTAAATTGTGAAAATGAAGCTGCAAGGGATGGACAGAATGAGAGCTTAGATGACATGGTATACAATACAGCTCTACTAAAGGAAGTAGAACAAATAGAAAAAGAAGCACTGAAAATGAAGACCAAGAAATTGGAGAAAAGACATATTAATCAAAGAGGAGCTGTGAAAAATAAAACAGTAAAGGTAAGAGAAAGTGATATTTTTGCTTACAATCAATCAGTGAGTGAGGAGCCTAAGGAGAGGAAATCATCCATAAAAAATATTTAG ATGACTGAAGAAGAAAATTGGAAAGAAATGGATGAGGATCGTGATGGAGGAAACGGTGAAAGAGATGACAGATTGGTGAATGAGGGAGAAGATGGTAATACAGAAAATATAAATATGGATGAAGAAGGGGATAGAACTACAATAGTAAATTGTGAAAATGAAGCTGCAAGGGATGGACAGAATGAGAGCTTAGATGACATGGTATACAATACAGCTCTACTAAAGGAAGTAGAACAAATAGAAAAAGAAGCACTGAAAATGAAGACCAAGAAATTGGAGAAAAGACATATTAATCAAAGAGGAGCTGTGAAAAATAAAACAGTAAAGGTAAGAGAAAGTGATATTTTTGCTTACAATCAATCAGTGAGTGAGGAGCCTAAGGAGAGGAAATCATCCATAAAAAATATTTAG MTEEENWKEMDEDRDGGNGERDDRLVNEGEDGNTENINMDEEGDRTTIVNCENEAARDGQNESLDDMVYNTALLKEVEQIEKEALKMKTKKLEKRHINQRGAVKNKTVKVRESDIFAYNQSVSEEPKERKSSIKNI* Homology
BLAST of CsGy1G030722.1 vs. NCBI nr
Match: KAE8650805.1 (hypothetical protein Csa_017412 [Cucumis sativus]) HSP 1 Score: 131 bits (329), Expect = 4.40e-35 Identity = 68/87 (78.16%), Postives = 80/87 (91.95%), Query Frame = 0
BLAST of CsGy1G030722.1 vs. NCBI nr
Match: KAE8653550.1 (hypothetical protein Csa_006898, partial [Cucumis sativus]) HSP 1 Score: 108 bits (270), Expect = 2.17e-27 Identity = 56/57 (98.25%), Postives = 56/57 (98.25%), Query Frame = 0
BLAST of CsGy1G030722.1 vs. NCBI nr
Match: KAA0042894.1 (hypothetical protein E6C27_scaffold44G004110 [Cucumis melo var. makuwa] >TYK05296.1 hypothetical protein E5676_scaffold108G001160 [Cucumis melo var. makuwa]) HSP 1 Score: 70.5 bits (171), Expect = 4.37e-12 Identity = 51/112 (45.54%), Postives = 69/112 (61.61%), Query Frame = 0
BLAST of CsGy1G030722.1 vs. NCBI nr
Match: KAA0037418.1 (uncharacterized protein E6C27_scaffold278G001300 [Cucumis melo var. makuwa] >TYJ97496.1 uncharacterized protein E5676_scaffold85G00010 [Cucumis melo var. makuwa]) HSP 1 Score: 68.9 bits (167), Expect = 1.72e-10 Identity = 47/97 (48.45%), Postives = 61/97 (62.89%), Query Frame = 0
BLAST of CsGy1G030722.1 vs. NCBI nr
Match: KAA0038989.1 (uncharacterized protein E6C27_scaffold84G00740 [Cucumis melo var. makuwa]) HSP 1 Score: 54.3 bits (129), Expect = 1.76e-05 Identity = 31/62 (50.00%), Postives = 43/62 (69.35%), Query Frame = 0
BLAST of CsGy1G030722.1 vs. ExPASy TrEMBL
Match: A0A0A0LXM6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G639010 PE=4 SV=1) HSP 1 Score: 208 bits (530), Expect = 2.14e-66 Identity = 115/120 (95.83%), Postives = 115/120 (95.83%), Query Frame = 0
BLAST of CsGy1G030722.1 vs. ExPASy TrEMBL
Match: A0A0A0KHB6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G191010 PE=4 SV=1) HSP 1 Score: 91.7 bits (226), Expect = 8.65e-22 Identity = 46/56 (82.14%), Postives = 53/56 (94.64%), Query Frame = 0
BLAST of CsGy1G030722.1 vs. ExPASy TrEMBL
Match: A0A0A0K3Z3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G284410 PE=4 SV=1) HSP 1 Score: 85.9 bits (211), Expect = 1.06e-18 Identity = 45/51 (88.24%), Postives = 48/51 (94.12%), Query Frame = 0
BLAST of CsGy1G030722.1 vs. ExPASy TrEMBL
Match: A0A0A0L8U3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G603550 PE=4 SV=1) HSP 1 Score: 84.3 bits (207), Expect = 4.01e-18 Identity = 41/56 (73.21%), Postives = 52/56 (92.86%), Query Frame = 0
BLAST of CsGy1G030722.1 vs. ExPASy TrEMBL
Match: A0A5A7THS6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold108G001160 PE=4 SV=1) HSP 1 Score: 70.5 bits (171), Expect = 2.11e-12 Identity = 51/112 (45.54%), Postives = 69/112 (61.61%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
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