CsGy1G030722 (gene) Cucumber (Gy14) v2.1

Overview
NameCsGy1G030722
Typegene
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionUnknown protein
LocationGy14Chr1: 29210742 .. 29211427 (-)
RNA-Seq ExpressionCsGy1G030722
SyntenyCsGy1G030722
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACTGAAGAAGAAAATTGGAAAGAAATGGATGAGGATCGTGATGGAGGAAACGGTGAAAGAGATGACAGATTGGTGAATGAGGGAGAAGATGGTAATACAGAAAATATAAATATGGATGAAGAAGGGGATAGAACTACAATAGTAAATTGTGAAAATGAAGCTGCAAGGGTATGATGTTATGACTAATATATGTATTGTTATTATTTTTTGAAACATGTATGTATATATTTAGTATTGTGTATGTATTTAGTATTTTGTATGTATTCTTGATTGACAGGATGGACAGAATGAGAGCTTAGATGACATGGTATACAATACAGCTCTACTAAAGGAAGTAGAACAAATAGAAAAAGAAGCACTGAAAATGAAGGTTATTACATTTCTTAAATCATTTATGTATTAGTGATTTTATAAATTAAAACATAAACTGAAAATGAAGTATATAATGTTTGTTGCAGACCAAGAAATTGGAGAAAAGACATATTAATCAAAGAGGAGCTGTGAAAAATAAAACAGTAAAGGTATGTATAAGAAAAATGTTCGAAATATATGACATATTATTATCTATATATCATAATATTTTTGAAATGATTAATTAGGTAAGAGAAAGTGATATTTTTGCTTACAATCAATCAGTGAGTGAGGAGCCTAAGGAGAGGAAATCATCCATAAAAAATATTTAG

mRNA sequence

ATGACTGAAGAAGAAAATTGGAAAGAAATGGATGAGGATCGTGATGGAGGAAACGGTGAAAGAGATGACAGATTGGTGAATGAGGGAGAAGATGGTAATACAGAAAATATAAATATGGATGAAGAAGGGGATAGAACTACAATAGTAAATTGTGAAAATGAAGCTGCAAGGGATGGACAGAATGAGAGCTTAGATGACATGGTATACAATACAGCTCTACTAAAGGAAGTAGAACAAATAGAAAAAGAAGCACTGAAAATGAAGACCAAGAAATTGGAGAAAAGACATATTAATCAAAGAGGAGCTGTGAAAAATAAAACAGTAAAGGTAAGAGAAAGTGATATTTTTGCTTACAATCAATCAGTGAGTGAGGAGCCTAAGGAGAGGAAATCATCCATAAAAAATATTTAG

Coding sequence (CDS)

ATGACTGAAGAAGAAAATTGGAAAGAAATGGATGAGGATCGTGATGGAGGAAACGGTGAAAGAGATGACAGATTGGTGAATGAGGGAGAAGATGGTAATACAGAAAATATAAATATGGATGAAGAAGGGGATAGAACTACAATAGTAAATTGTGAAAATGAAGCTGCAAGGGATGGACAGAATGAGAGCTTAGATGACATGGTATACAATACAGCTCTACTAAAGGAAGTAGAACAAATAGAAAAAGAAGCACTGAAAATGAAGACCAAGAAATTGGAGAAAAGACATATTAATCAAAGAGGAGCTGTGAAAAATAAAACAGTAAAGGTAAGAGAAAGTGATATTTTTGCTTACAATCAATCAGTGAGTGAGGAGCCTAAGGAGAGGAAATCATCCATAAAAAATATTTAG

Protein sequence

MTEEENWKEMDEDRDGGNGERDDRLVNEGEDGNTENINMDEEGDRTTIVNCENEAARDGQNESLDDMVYNTALLKEVEQIEKEALKMKTKKLEKRHINQRGAVKNKTVKVRESDIFAYNQSVSEEPKERKSSIKNI*
Homology
BLAST of CsGy1G030722 vs. NCBI nr
Match: KAE8650805.1 (hypothetical protein Csa_017412 [Cucumis sativus])

HSP 1 Score: 131 bits (329), Expect = 4.40e-35
Identity = 68/87 (78.16%), Postives = 80/87 (91.95%), Query Frame = 0

Query: 2   TEEENWKEMDEDRDGGNGERDDRLVNEGEDGNTENINMDEEGDRTTIVNCENEAARDGQN 61
           TEEENW++ DEDRDGGNG+R+DRL ++GEDGNTEN+N+DE+ +RTTI+N ENEAARD QN
Sbjct: 137 TEEENWEDRDEDRDGGNGKRNDRLADDGEDGNTENLNIDEKWERTTIINSENEAARDEQN 196

Query: 62  ESLDDMVYNTALLKEVEQIEKEALKMK 88
           ESLDDMVYN ALLKE E+IEKEALKMK
Sbjct: 197 ESLDDMVYNIALLKEAEEIEKEALKMK 223

BLAST of CsGy1G030722 vs. NCBI nr
Match: KAE8653550.1 (hypothetical protein Csa_006898, partial [Cucumis sativus])

HSP 1 Score: 108 bits (270), Expect = 2.17e-27
Identity = 56/57 (98.25%), Postives = 56/57 (98.25%), Query Frame = 0

Query: 1   MTEEENWKEMDEDRDGGNGERDDRLVNEGEDGNTENINMDEEGDRTTIVNCENEAAR 57
           MTEEENWKEMDEDRDGGNGERDDRLVNEGEDGNTENINMDEEGDRTTIVN ENEAAR
Sbjct: 68  MTEEENWKEMDEDRDGGNGERDDRLVNEGEDGNTENINMDEEGDRTTIVNSENEAAR 124

BLAST of CsGy1G030722 vs. NCBI nr
Match: KAA0042894.1 (hypothetical protein E6C27_scaffold44G004110 [Cucumis melo var. makuwa] >TYK05296.1 hypothetical protein E5676_scaffold108G001160 [Cucumis melo var. makuwa])

HSP 1 Score: 70.5 bits (171), Expect = 4.37e-12
Identity = 51/112 (45.54%), Postives = 69/112 (61.61%), Query Frame = 0

Query: 11  DEDRDGGNGERDDRLVNEGEDGNTENINMDEEGDRTTIVNCENEAARDGQNESLDDMVYN 70
           D++ DGG G R+    NE + G    ++ DE   +      ENE    GQN+ +DD+VYN
Sbjct: 10  DDNNDGGEGGRN----NENDGGE---VDRDENNQQDGNNETENEGQEGGQNDLIDDVVYN 69

Query: 71  TALLKEVEQIEKEALKMKTKKLEKRHINQRGAVKNKTVKVRESDIFAYNQSV 122
           TA+L EV++IEK+A+KMK KKLEKR   +  AVK  T+  R  DI AY Q+V
Sbjct: 70  TAILNEVDKIEKKAIKMKKKKLEKRLAQRLVAVKTATITARGRDI-AYQQAV 113

BLAST of CsGy1G030722 vs. NCBI nr
Match: KAA0037418.1 (uncharacterized protein E6C27_scaffold278G001300 [Cucumis melo var. makuwa] >TYJ97496.1 uncharacterized protein E5676_scaffold85G00010 [Cucumis melo var. makuwa])

HSP 1 Score: 68.9 bits (167), Expect = 1.72e-10
Identity = 47/97 (48.45%), Postives = 61/97 (62.89%), Query Frame = 0

Query: 20  ERDDRLVNEGEDGNTENINMDEEGDRTTIVNC------ENEAARDGQNESLDDMVYNTAL 79
           +RDD   N+G +G+T+N N+D E DR            ENE    GQN+ LDD+VYNTA+
Sbjct: 76  QRDDN--NDGGEGDTKNENVDNEADRDVTNQPDGNDKNENEGQEGGQNDLLDDVVYNTAI 135

Query: 80  LKEVEQIEKEALKMKTKKLEKRHINQRGAVKNKTVKV 110
           L EV++I+KEA+KMK KKLEKR      AV+  T  V
Sbjct: 136 LNEVDKIKKEAIKMKKKKLEKRAAETHVAVRTATFTV 170

BLAST of CsGy1G030722 vs. NCBI nr
Match: KAA0038989.1 (uncharacterized protein E6C27_scaffold84G00740 [Cucumis melo var. makuwa])

HSP 1 Score: 54.3 bits (129), Expect = 1.76e-05
Identity = 31/62 (50.00%), Postives = 43/62 (69.35%), Query Frame = 0

Query: 27  NEGEDGNTENINMDEEGDRTTIVNCENEAARDGQNESLDDMVYNTALLKEVEQIEKEALK 86
           N+G +G+T N N+D E DR           + GQN+ LDD+VYNTALL E+++IEK+A+K
Sbjct: 190 NDGGEGDTNNENVDNEVDRDVTTQ------QGGQNDLLDDVVYNTALLNEIDKIEKKAIK 245

Query: 87  MK 88
           MK
Sbjct: 250 MK 245

BLAST of CsGy1G030722 vs. ExPASy TrEMBL
Match: A0A0A0LXM6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G639010 PE=4 SV=1)

HSP 1 Score: 208 bits (530), Expect = 2.14e-66
Identity = 115/120 (95.83%), Postives = 115/120 (95.83%), Query Frame = 0

Query: 1   MTEEENWKEMDEDRDGGNGERDDRLVNEGEDGNTENINMDEEGDRTTIVNCENEAARDGQ 60
           MTEEENWKEMDEDRDGGNGERDDRLVNEGEDGNTENI MDEEGDRTTIVN ENEAAR   
Sbjct: 68  MTEEENWKEMDEDRDGGNGERDDRLVNEGEDGNTENIKMDEEGDRTTIVNSENEAAR--- 127

Query: 61  NESLDDMVYNTALLKEVEQIEKEALKMKTKKLEKRHINQRGAVKNKTVKVRESDIFAYNQ 120
           NESLDDMVYNTALLKEVEQIEKEALKMKTKKLEKRHINQRGAVKNKTVKVRESDIFAYNQ
Sbjct: 128 NESLDDMVYNTALLKEVEQIEKEALKMKTKKLEKRHINQRGAVKNKTVKVRESDIFAYNQ 184

BLAST of CsGy1G030722 vs. ExPASy TrEMBL
Match: A0A0A0KHB6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G191010 PE=4 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 8.65e-22
Identity = 46/56 (82.14%), Postives = 53/56 (94.64%), Query Frame = 0

Query: 1  MTEEENWKEMDEDRDGGNGERDDRLVNEGEDGNTENINMDEEGDRTTIVNCENEAA 56
          MTEEENW++ DEDRDG NGERDDRL+++GEDGNTENINMDE+GD+TTIVN ENEAA
Sbjct: 1  MTEEENWEDKDEDRDGENGERDDRLLDDGEDGNTENINMDEKGDKTTIVNSENEAA 56

BLAST of CsGy1G030722 vs. ExPASy TrEMBL
Match: A0A0A0K3Z3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G284410 PE=4 SV=1)

HSP 1 Score: 85.9 bits (211), Expect = 1.06e-18
Identity = 45/51 (88.24%), Postives = 48/51 (94.12%), Query Frame = 0

Query: 11  DEDRDGGNGERDDRLVNEGEDGNTENINMDEEGDRTTIVNCENEAARDGQN 61
           DEDRDGGNGERDD LV++GED NTENINMDEEGD+TTIVN ENEAARDGQN
Sbjct: 82  DEDRDGGNGERDDGLVDDGEDCNTENINMDEEGDKTTIVNSENEAARDGQN 132

BLAST of CsGy1G030722 vs. ExPASy TrEMBL
Match: A0A0A0L8U3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G603550 PE=4 SV=1)

HSP 1 Score: 84.3 bits (207), Expect = 4.01e-18
Identity = 41/56 (73.21%), Postives = 52/56 (92.86%), Query Frame = 0

Query: 2   TEEENWKEMDEDRDGGNGERDDRLVNEGEDGNTENINMDEEGDRTTIVNCENEAAR 57
           TEEENW++ DEDRDGGNG+R+DRL ++GEDGNTEN+N+DE+ +RTTI+N ENEAAR
Sbjct: 74  TEEENWEDRDEDRDGGNGKRNDRLADDGEDGNTENLNIDEKWERTTIINSENEAAR 129

BLAST of CsGy1G030722 vs. ExPASy TrEMBL
Match: A0A5A7THS6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold108G001160 PE=4 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 2.11e-12
Identity = 51/112 (45.54%), Postives = 69/112 (61.61%), Query Frame = 0

Query: 11  DEDRDGGNGERDDRLVNEGEDGNTENINMDEEGDRTTIVNCENEAARDGQNESLDDMVYN 70
           D++ DGG G R+    NE + G    ++ DE   +      ENE    GQN+ +DD+VYN
Sbjct: 10  DDNNDGGEGGRN----NENDGGE---VDRDENNQQDGNNETENEGQEGGQNDLIDDVVYN 69

Query: 71  TALLKEVEQIEKEALKMKTKKLEKRHINQRGAVKNKTVKVRESDIFAYNQSV 122
           TA+L EV++IEK+A+KMK KKLEKR   +  AVK  T+  R  DI AY Q+V
Sbjct: 70  TAILNEVDKIEKKAIKMKKKKLEKRLAQRLVAVKTATITARGRDI-AYQQAV 113

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
KAE8650805.14.40e-3578.16hypothetical protein Csa_017412 [Cucumis sativus][more]
KAE8653550.12.17e-2798.25hypothetical protein Csa_006898, partial [Cucumis sativus][more]
KAA0042894.14.37e-1245.54hypothetical protein E6C27_scaffold44G004110 [Cucumis melo var. makuwa] >TYK0529... [more]
KAA0037418.11.72e-1048.45uncharacterized protein E6C27_scaffold278G001300 [Cucumis melo var. makuwa] >TYJ... [more]
KAA0038989.11.76e-0550.00uncharacterized protein E6C27_scaffold84G00740 [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
A0A0A0LXM62.14e-6695.83Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G639010 PE=4 SV=1[more]
A0A0A0KHB68.65e-2282.14Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G191010 PE=4 SV=1[more]
A0A0A0K3Z31.06e-1888.24Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G284410 PE=4 SV=1[more]
A0A0A0L8U34.01e-1873.21Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G603550 PE=4 SV=1[more]
A0A5A7THS62.11e-1245.54Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 70..95
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 117..136
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 11..30
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..45

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy1G030722.1CsGy1G030722.1mRNA