Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGCATCACCCAAAGGAAGACAAGTTTGAGATTTTACTCTCCACTTTGGAGCTAAAGTTGCAGAGTTCTTGTTTTCGACACGAGGACGAGGAAGAAGAAGAAGAAGATTGTCGGGATGATTTCGTCAAGACTCCGAGATCTTTGAAGCCTCCAGCGGTTCTCGAGTGTCCTCCGCCGCCGAGAAAGCCGAGGAGGTTGCCATCGATGAAACGGAAGGCCGGTGGTGGCCGGTCGATCTTTATGTCGCATCATTGTCTCTTCGGCGAAATGGAGGTTGATTTGGAGCTGCTGTTTCCTTCGAACCAGCTTCATGGCGGTAGGATTGTTAAGAAGGTGAAACGACGGCGTTTCTTTTGA
mRNA sequence
ATGGAGCATCACCCAAAGGAAGACAAGTTTGAGATTTTACTCTCCACTTTGGAGCTAAAGTTGCAGAGTTCTTGTTTTCGACACGAGGACGAGGAAGAAGAAGAAGAAGATTGTCGGGATGATTTCGTCAAGACTCCGAGATCTTTGAAGCCTCCAGCGGTTCTCGAGTGTCCTCCGCCGCCGAGAAAGCCGAGGAGGTTGCCATCGATGAAACGGAAGGCCGGTGGTGGCCGGTCGATCTTTATGTCGCATCATTGTCTCTTCGGCGAAATGGAGGTTGATTTGGAGCTGCTGTTTCCTTCGAACCAGCTTCATGGCGGTAGGATTGTTAAGAAGGTGAAACGACGGCGTTTCTTTTGA
Coding sequence (CDS)
ATGGAGCATCACCCAAAGGAAGACAAGTTTGAGATTTTACTCTCCACTTTGGAGCTAAAGTTGCAGAGTTCTTGTTTTCGACACGAGGACGAGGAAGAAGAAGAAGAAGATTGTCGGGATGATTTCGTCAAGACTCCGAGATCTTTGAAGCCTCCAGCGGTTCTCGAGTGTCCTCCGCCGCCGAGAAAGCCGAGGAGGTTGCCATCGATGAAACGGAAGGCCGGTGGTGGCCGGTCGATCTTTATGTCGCATCATTGTCTCTTCGGCGAAATGGAGGTTGATTTGGAGCTGCTGTTTCCTTCGAACCAGCTTCATGGCGGTAGGATTGTTAAGAAGGTGAAACGACGGCGTTTCTTTTGA
Protein sequence
MEHHPKEDKFEILLSTLELKLQSSCFRHEDEEEEEEDCRDDFVKTPRSLKPPAVLECPPPPRKPRRLPSMKRKAGGGRSIFMSHHCLFGEMEVDLELLFPSNQLHGGRIVKKVKRRRFF
Homology
BLAST of Cp4.1LG05g09190.1 vs. NCBI nr
Match:
XP_023532326.1 (cyclin-dependent protein kinase inhibitor SMR14 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 243 bits (621), Expect = 3.35e-81
Identity = 119/119 (100.00%), Postives = 119/119 (100.00%), Query Frame = 0
Query: 1 MEHHPKEDKFEILLSTLELKLQSSCFRHEDEEEEEEDCRDDFVKTPRSLKPPAVLECPPP 60
MEHHPKEDKFEILLSTLELKLQSSCFRHEDEEEEEEDCRDDFVKTPRSLKPPAVLECPPP
Sbjct: 1 MEHHPKEDKFEILLSTLELKLQSSCFRHEDEEEEEEDCRDDFVKTPRSLKPPAVLECPPP 60
Query: 61 PRKPRRLPSMKRKAGGGRSIFMSHHCLFGEMEVDLELLFPSNQLHGGRIVKKVKRRRFF 119
PRKPRRLPSMKRKAGGGRSIFMSHHCLFGEMEVDLELLFPSNQLHGGRIVKKVKRRRFF
Sbjct: 61 PRKPRRLPSMKRKAGGGRSIFMSHHCLFGEMEVDLELLFPSNQLHGGRIVKKVKRRRFF 119
BLAST of Cp4.1LG05g09190.1 vs. NCBI nr
Match:
KAG6605463.1 (hypothetical protein SDJN03_02780, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 225 bits (574), Expect = 5.13e-74
Identity = 113/120 (94.17%), Postives = 114/120 (95.00%), Query Frame = 0
Query: 1 MEHHPKEDKFEILLSTLELKLQSSCFRHEDE-EEEEEDCRDDFVKTPRSLKPPAVLECPP 60
MEHH KEDKFEILLSTLELKLQSSCFRHEDE EEEEEDCRDDFVKTPRSL+PPAVLECPP
Sbjct: 1 MEHHQKEDKFEILLSTLELKLQSSCFRHEDEDEEEEEDCRDDFVKTPRSLEPPAVLECPP 60
Query: 61 PPRKPRRLPSMKRKAGGGRSIFMSHHCLFGEMEVDLELLFPSNQLHGGRIVKKVKRRRFF 119
PPRKPRR PS KRKAG RSIFMSHHCLFGEMEVDLELLFPSNQLHGGRIVKKVKRRRFF
Sbjct: 61 PPRKPRRFPSAKRKAGDSRSIFMSHHCLFGEMEVDLELLFPSNQLHGGRIVKKVKRRRFF 120
BLAST of Cp4.1LG05g09190.1 vs. NCBI nr
Match:
XP_022947800.1 (cyclin-dependent protein kinase inhibitor SMR10-like [Cucurbita moschata])
HSP 1 Score: 221 bits (563), Expect = 2.44e-72
Identity = 111/120 (92.50%), Postives = 113/120 (94.17%), Query Frame = 0
Query: 1 MEHHPKEDKFEILLSTLELKLQSSCFRHEDEEE-EEEDCRDDFVKTPRSLKPPAVLECPP 60
MEHH KEDKFEILLSTLELKLQSSCFR EDE+E EEEDCRDDFVKTPRSL+PPAVLECPP
Sbjct: 1 MEHHQKEDKFEILLSTLELKLQSSCFRREDEDEKEEEDCRDDFVKTPRSLEPPAVLECPP 60
Query: 61 PPRKPRRLPSMKRKAGGGRSIFMSHHCLFGEMEVDLELLFPSNQLHGGRIVKKVKRRRFF 119
PPRKPRR PS KRKAG RSIFMSHHCLFGEMEVDLELLFPSNQLHGGRIVKKVKRRRFF
Sbjct: 61 PPRKPRRFPSAKRKAGDSRSIFMSHHCLFGEMEVDLELLFPSNQLHGGRIVKKVKRRRFF 120
BLAST of Cp4.1LG05g09190.1 vs. NCBI nr
Match:
XP_023006801.1 (cyclin-dependent protein kinase inhibitor SMR14-like [Cucurbita maxima])
HSP 1 Score: 211 bits (538), Expect = 1.54e-68
Identity = 109/120 (90.83%), Postives = 113/120 (94.17%), Query Frame = 0
Query: 1 MEHHP-KEDKFEILLSTLELKLQSSCFRHEDEEEEEEDCRDDFVKTPRSLKPPAVLECPP 60
MEHHP KEDKFEILLSTLELKLQSSCFRHEDEEEEE DCRDDFVKTPRSL+P VL+CPP
Sbjct: 1 MEHHPQKEDKFEILLSTLELKLQSSCFRHEDEEEEE-DCRDDFVKTPRSLEPAVVLQCPP 60
Query: 61 PPRKPRRLPSMKRKAGGGRSIFMSHHCLFGEMEVDLELLFPSNQLHGGRIVKKVKRRRFF 119
PPRKPRRLPS KRKAG GRSIFMSH+CLF EMEVDLELLFPSNQL+GGRIVKKVKRRRFF
Sbjct: 61 PPRKPRRLPSAKRKAGVGRSIFMSHNCLFREMEVDLELLFPSNQLYGGRIVKKVKRRRFF 119
BLAST of Cp4.1LG05g09190.1 vs. NCBI nr
Match:
KAG6570710.1 (hypothetical protein SDJN03_29625, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 125 bits (314), Expect = 4.86e-32
Identity = 67/105 (63.81%), Postives = 80/105 (76.19%), Query Frame = 0
Query: 5 PKEDKFEILLSTLELKL--QSSCFRHEDEEEEEEDCRDDFVKTPRSLKPPAVLECPPPPR 64
PKEDKFEILLSTLEL+L S C R E+EE+ +E DD VKTPRSL+P A+LECPPPPR
Sbjct: 7 PKEDKFEILLSTLELRLPLSSFCLRPEEEEDNDEARPDDLVKTPRSLEPAAILECPPPPR 66
Query: 65 KPRRLPSMKRKAGGGRSIFMSHHCLFGEMEVDLELLFPSNQLHGG 107
KPRRLPS++++ GGR FM H +FGEM+ LE+LFPSN G
Sbjct: 67 KPRRLPSVRKRKAGGRLTFMPHDYVFGEMK-SLEVLFPSNLFDVG 110
BLAST of Cp4.1LG05g09190.1 vs. ExPASy TrEMBL
Match:
A0A6J1G7X1 (cyclin-dependent protein kinase inhibitor SMR10-like OS=Cucurbita moschata OX=3662 GN=LOC111451555 PE=4 SV=1)
HSP 1 Score: 221 bits (563), Expect = 1.18e-72
Identity = 111/120 (92.50%), Postives = 113/120 (94.17%), Query Frame = 0
Query: 1 MEHHPKEDKFEILLSTLELKLQSSCFRHEDEEE-EEEDCRDDFVKTPRSLKPPAVLECPP 60
MEHH KEDKFEILLSTLELKLQSSCFR EDE+E EEEDCRDDFVKTPRSL+PPAVLECPP
Sbjct: 1 MEHHQKEDKFEILLSTLELKLQSSCFRREDEDEKEEEDCRDDFVKTPRSLEPPAVLECPP 60
Query: 61 PPRKPRRLPSMKRKAGGGRSIFMSHHCLFGEMEVDLELLFPSNQLHGGRIVKKVKRRRFF 119
PPRKPRR PS KRKAG RSIFMSHHCLFGEMEVDLELLFPSNQLHGGRIVKKVKRRRFF
Sbjct: 61 PPRKPRRFPSAKRKAGDSRSIFMSHHCLFGEMEVDLELLFPSNQLHGGRIVKKVKRRRFF 120
BLAST of Cp4.1LG05g09190.1 vs. ExPASy TrEMBL
Match:
A0A6J1KYS4 (cyclin-dependent protein kinase inhibitor SMR14-like OS=Cucurbita maxima OX=3661 GN=LOC111499465 PE=4 SV=1)
HSP 1 Score: 211 bits (538), Expect = 7.44e-69
Identity = 109/120 (90.83%), Postives = 113/120 (94.17%), Query Frame = 0
Query: 1 MEHHP-KEDKFEILLSTLELKLQSSCFRHEDEEEEEEDCRDDFVKTPRSLKPPAVLECPP 60
MEHHP KEDKFEILLSTLELKLQSSCFRHEDEEEEE DCRDDFVKTPRSL+P VL+CPP
Sbjct: 1 MEHHPQKEDKFEILLSTLELKLQSSCFRHEDEEEEE-DCRDDFVKTPRSLEPAVVLQCPP 60
Query: 61 PPRKPRRLPSMKRKAGGGRSIFMSHHCLFGEMEVDLELLFPSNQLHGGRIVKKVKRRRFF 119
PPRKPRRLPS KRKAG GRSIFMSH+CLF EMEVDLELLFPSNQL+GGRIVKKVKRRRFF
Sbjct: 61 PPRKPRRLPSAKRKAGVGRSIFMSHNCLFREMEVDLELLFPSNQLYGGRIVKKVKRRRFF 119
BLAST of Cp4.1LG05g09190.1 vs. ExPASy TrEMBL
Match:
A0A0A0KHB1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G190470 PE=4 SV=1)
HSP 1 Score: 102 bits (254), Expect = 1.49e-25
Identity = 69/117 (58.97%), Postives = 84/117 (71.79%), Query Frame = 0
Query: 6 KEDKFEILLSTLELKLQ----SSCFRHEDEEEEEEDCRDDFVKTPRSLKPPAV-LECPPP 65
K +KFEILLSTLEL+L S C + +E+E D DD +KTPRSL+P +V L+CPPP
Sbjct: 11 KLEKFEILLSTLELRLPLPLPSFCCLGD--KEKEVDRGDDLMKTPRSLEPTSVVLQCPPP 70
Query: 66 PRKPRRLPSM-KRKAGGG--RSIFMSHHCLFGEMEVDLELLFPSNQLHGGRIVKKVK 114
PRKPRR PS KRKAGGG RSI MSH F ++E+D LFPSN + GG+IVKK+K
Sbjct: 71 PRKPRRFPSAAKRKAGGGGGRSILMSHDYFFRDVELDW--LFPSNVV-GGKIVKKIK 122
BLAST of Cp4.1LG05g09190.1 vs. ExPASy TrEMBL
Match:
A0A6P3Z9D7 (cyclin-dependent protein kinase inhibitor SMR10 OS=Ziziphus jujuba OX=326968 GN=LOC107411099 PE=4 SV=1)
HSP 1 Score: 68.2 bits (165), Expect = 1.43e-11
Identity = 50/118 (42.37%), Postives = 71/118 (60.17%), Query Frame = 0
Query: 8 DKFEILLSTLELKL---QSSCFRHEDEEEEEEDCRDDFVKTPRSL--KPPAVLECPPPPR 67
DKF++L+S+L+LK+ Q + +D++++ +D D F KTP S K PA L CPP PR
Sbjct: 75 DKFDVLVSSLKLKIPSVQEFRVKEDDKDDDNKDNNDGF-KTPTSSDQKIPATLHCPPAPR 134
Query: 68 KPRRLP--SMKRKAGGGRSIFMSHHCLFGEMEVDLELLFPS---NQLHGGRIVKKVKR 115
KP+ LP SMKRKA G H + +M ++E LFP L GG+I KKV++
Sbjct: 135 KPKSLPLSSMKRKAHG------RHRQVLLDMSNEIESLFPPVLLADLGGGKIKKKVRK 185
BLAST of Cp4.1LG05g09190.1 vs. ExPASy TrEMBL
Match:
B9T5R7 (Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_0449900 PE=4 SV=1)
HSP 1 Score: 67.0 bits (162), Expect = 3.25e-11
Identity = 46/114 (40.35%), Postives = 73/114 (64.04%), Query Frame = 0
Query: 6 KEDKFEILLSTLELKLQS-SCFRHEDEEEEEEDCRDDFVKTPRSL--KPPAVLECPPPPR 65
+EDK ++L+STL++KL S F+ +++E+E++D DD KTP SL K P +L CPP PR
Sbjct: 61 QEDKCKLLISTLKIKLPSLGEFKIQEQEQEQQDL-DDGCKTPTSLNHKIPTLLPCPPAPR 120
Query: 66 KPRRLPSMKRKAGGGRSIFMSHHCLFGEMEVDLELLFP-SNQLHGGRIVKKVKR 115
KP+ LPS KRK+ R + + ++ ++E LFP + + G +KKV++
Sbjct: 121 KPKSLPSNKRKSPARRRVLL-------DLSNEIESLFPPALRADLGAKIKKVRQ 166
BLAST of Cp4.1LG05g09190.1 vs. TAIR 10
Match:
AT5G59360.1 (unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )
HSP 1 Score: 42.7 bits (99), Expect = 2.3e-04
Identity = 39/134 (29.10%), Postives = 67/134 (50.00%), Query Frame = 0
Query: 6 KEDKFEILLSTLELKLQSSCFR-HEDEEEEEE--------------DCRDD-----FVKT 65
K D + LS + QS+ R H+ ++++E +C+D+ +T
Sbjct: 30 KSDSLDSSLSRHHQENQSNRQRNHQHRQQDQELENLQDGSRGKRKWECKDEESPVKIPET 89
Query: 66 PRSLKPPAVLECPP-PPRKPRRLPSMKRKAGGGRSIFMSHHCLFGEMEVDLELLFPSNQL 119
PR+ +V CPP PPRKP+ +PSMKR R +++ +F ++ ++E +FP + L
Sbjct: 90 PRNSN--SVCYCPPRPPRKPKAIPSMKR-----RGMWVKRSVVFLDVAREVESMFPPSVL 149
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
XP_023532326.1 | 3.35e-81 | 100.00 | cyclin-dependent protein kinase inhibitor SMR14 [Cucurbita pepo subsp. pepo] | [more] |
KAG6605463.1 | 5.13e-74 | 94.17 | hypothetical protein SDJN03_02780, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
XP_022947800.1 | 2.44e-72 | 92.50 | cyclin-dependent protein kinase inhibitor SMR10-like [Cucurbita moschata] | [more] |
XP_023006801.1 | 1.54e-68 | 90.83 | cyclin-dependent protein kinase inhibitor SMR14-like [Cucurbita maxima] | [more] |
KAG6570710.1 | 4.86e-32 | 63.81 | hypothetical protein SDJN03_29625, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1G7X1 | 1.18e-72 | 92.50 | cyclin-dependent protein kinase inhibitor SMR10-like OS=Cucurbita moschata OX=36... | [more] |
A0A6J1KYS4 | 7.44e-69 | 90.83 | cyclin-dependent protein kinase inhibitor SMR14-like OS=Cucurbita maxima OX=3661... | [more] |
A0A0A0KHB1 | 1.49e-25 | 58.97 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G190470 PE=4 SV=1 | [more] |
A0A6P3Z9D7 | 1.43e-11 | 42.37 | cyclin-dependent protein kinase inhibitor SMR10 OS=Ziziphus jujuba OX=326968 GN=... | [more] |
B9T5R7 | 3.25e-11 | 40.35 | Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_0449900 PE=4 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
AT5G59360.1 | 2.3e-04 | 29.10 | unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0... | [more] |