Cp4.1LG05g09190 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview
NameCp4.1LG05g09190
Typegene
OrganismCucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Descriptioncyclin-dependent protein kinase inhibitor SMR10-like
LocationCp4.1LG05: 6025205 .. 6025564 (-)
RNA-Seq ExpressionCp4.1LG05g09190
SyntenyCp4.1LG05g09190
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGCATCACCCAAAGGAAGACAAGTTTGAGATTTTACTCTCCACTTTGGAGCTAAAGTTGCAGAGTTCTTGTTTTCGACACGAGGACGAGGAAGAAGAAGAAGAAGATTGTCGGGATGATTTCGTCAAGACTCCGAGATCTTTGAAGCCTCCAGCGGTTCTCGAGTGTCCTCCGCCGCCGAGAAAGCCGAGGAGGTTGCCATCGATGAAACGGAAGGCCGGTGGTGGCCGGTCGATCTTTATGTCGCATCATTGTCTCTTCGGCGAAATGGAGGTTGATTTGGAGCTGCTGTTTCCTTCGAACCAGCTTCATGGCGGTAGGATTGTTAAGAAGGTGAAACGACGGCGTTTCTTTTGA

mRNA sequence

ATGGAGCATCACCCAAAGGAAGACAAGTTTGAGATTTTACTCTCCACTTTGGAGCTAAAGTTGCAGAGTTCTTGTTTTCGACACGAGGACGAGGAAGAAGAAGAAGAAGATTGTCGGGATGATTTCGTCAAGACTCCGAGATCTTTGAAGCCTCCAGCGGTTCTCGAGTGTCCTCCGCCGCCGAGAAAGCCGAGGAGGTTGCCATCGATGAAACGGAAGGCCGGTGGTGGCCGGTCGATCTTTATGTCGCATCATTGTCTCTTCGGCGAAATGGAGGTTGATTTGGAGCTGCTGTTTCCTTCGAACCAGCTTCATGGCGGTAGGATTGTTAAGAAGGTGAAACGACGGCGTTTCTTTTGA

Coding sequence (CDS)

ATGGAGCATCACCCAAAGGAAGACAAGTTTGAGATTTTACTCTCCACTTTGGAGCTAAAGTTGCAGAGTTCTTGTTTTCGACACGAGGACGAGGAAGAAGAAGAAGAAGATTGTCGGGATGATTTCGTCAAGACTCCGAGATCTTTGAAGCCTCCAGCGGTTCTCGAGTGTCCTCCGCCGCCGAGAAAGCCGAGGAGGTTGCCATCGATGAAACGGAAGGCCGGTGGTGGCCGGTCGATCTTTATGTCGCATCATTGTCTCTTCGGCGAAATGGAGGTTGATTTGGAGCTGCTGTTTCCTTCGAACCAGCTTCATGGCGGTAGGATTGTTAAGAAGGTGAAACGACGGCGTTTCTTTTGA

Protein sequence

MEHHPKEDKFEILLSTLELKLQSSCFRHEDEEEEEEDCRDDFVKTPRSLKPPAVLECPPPPRKPRRLPSMKRKAGGGRSIFMSHHCLFGEMEVDLELLFPSNQLHGGRIVKKVKRRRFF
Homology
BLAST of Cp4.1LG05g09190 vs. NCBI nr
Match: XP_023532326.1 (cyclin-dependent protein kinase inhibitor SMR14 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 243 bits (621), Expect = 3.35e-81
Identity = 119/119 (100.00%), Postives = 119/119 (100.00%), Query Frame = 0

Query: 1   MEHHPKEDKFEILLSTLELKLQSSCFRHEDEEEEEEDCRDDFVKTPRSLKPPAVLECPPP 60
           MEHHPKEDKFEILLSTLELKLQSSCFRHEDEEEEEEDCRDDFVKTPRSLKPPAVLECPPP
Sbjct: 1   MEHHPKEDKFEILLSTLELKLQSSCFRHEDEEEEEEDCRDDFVKTPRSLKPPAVLECPPP 60

Query: 61  PRKPRRLPSMKRKAGGGRSIFMSHHCLFGEMEVDLELLFPSNQLHGGRIVKKVKRRRFF 119
           PRKPRRLPSMKRKAGGGRSIFMSHHCLFGEMEVDLELLFPSNQLHGGRIVKKVKRRRFF
Sbjct: 61  PRKPRRLPSMKRKAGGGRSIFMSHHCLFGEMEVDLELLFPSNQLHGGRIVKKVKRRRFF 119

BLAST of Cp4.1LG05g09190 vs. NCBI nr
Match: KAG6605463.1 (hypothetical protein SDJN03_02780, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 225 bits (574), Expect = 5.13e-74
Identity = 113/120 (94.17%), Postives = 114/120 (95.00%), Query Frame = 0

Query: 1   MEHHPKEDKFEILLSTLELKLQSSCFRHEDE-EEEEEDCRDDFVKTPRSLKPPAVLECPP 60
           MEHH KEDKFEILLSTLELKLQSSCFRHEDE EEEEEDCRDDFVKTPRSL+PPAVLECPP
Sbjct: 1   MEHHQKEDKFEILLSTLELKLQSSCFRHEDEDEEEEEDCRDDFVKTPRSLEPPAVLECPP 60

Query: 61  PPRKPRRLPSMKRKAGGGRSIFMSHHCLFGEMEVDLELLFPSNQLHGGRIVKKVKRRRFF 119
           PPRKPRR PS KRKAG  RSIFMSHHCLFGEMEVDLELLFPSNQLHGGRIVKKVKRRRFF
Sbjct: 61  PPRKPRRFPSAKRKAGDSRSIFMSHHCLFGEMEVDLELLFPSNQLHGGRIVKKVKRRRFF 120

BLAST of Cp4.1LG05g09190 vs. NCBI nr
Match: XP_022947800.1 (cyclin-dependent protein kinase inhibitor SMR10-like [Cucurbita moschata])

HSP 1 Score: 221 bits (563), Expect = 2.44e-72
Identity = 111/120 (92.50%), Postives = 113/120 (94.17%), Query Frame = 0

Query: 1   MEHHPKEDKFEILLSTLELKLQSSCFRHEDEEE-EEEDCRDDFVKTPRSLKPPAVLECPP 60
           MEHH KEDKFEILLSTLELKLQSSCFR EDE+E EEEDCRDDFVKTPRSL+PPAVLECPP
Sbjct: 1   MEHHQKEDKFEILLSTLELKLQSSCFRREDEDEKEEEDCRDDFVKTPRSLEPPAVLECPP 60

Query: 61  PPRKPRRLPSMKRKAGGGRSIFMSHHCLFGEMEVDLELLFPSNQLHGGRIVKKVKRRRFF 119
           PPRKPRR PS KRKAG  RSIFMSHHCLFGEMEVDLELLFPSNQLHGGRIVKKVKRRRFF
Sbjct: 61  PPRKPRRFPSAKRKAGDSRSIFMSHHCLFGEMEVDLELLFPSNQLHGGRIVKKVKRRRFF 120

BLAST of Cp4.1LG05g09190 vs. NCBI nr
Match: XP_023006801.1 (cyclin-dependent protein kinase inhibitor SMR14-like [Cucurbita maxima])

HSP 1 Score: 211 bits (538), Expect = 1.54e-68
Identity = 109/120 (90.83%), Postives = 113/120 (94.17%), Query Frame = 0

Query: 1   MEHHP-KEDKFEILLSTLELKLQSSCFRHEDEEEEEEDCRDDFVKTPRSLKPPAVLECPP 60
           MEHHP KEDKFEILLSTLELKLQSSCFRHEDEEEEE DCRDDFVKTPRSL+P  VL+CPP
Sbjct: 1   MEHHPQKEDKFEILLSTLELKLQSSCFRHEDEEEEE-DCRDDFVKTPRSLEPAVVLQCPP 60

Query: 61  PPRKPRRLPSMKRKAGGGRSIFMSHHCLFGEMEVDLELLFPSNQLHGGRIVKKVKRRRFF 119
           PPRKPRRLPS KRKAG GRSIFMSH+CLF EMEVDLELLFPSNQL+GGRIVKKVKRRRFF
Sbjct: 61  PPRKPRRLPSAKRKAGVGRSIFMSHNCLFREMEVDLELLFPSNQLYGGRIVKKVKRRRFF 119

BLAST of Cp4.1LG05g09190 vs. NCBI nr
Match: KAG6570710.1 (hypothetical protein SDJN03_29625, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 125 bits (314), Expect = 4.86e-32
Identity = 67/105 (63.81%), Postives = 80/105 (76.19%), Query Frame = 0

Query: 5   PKEDKFEILLSTLELKL--QSSCFRHEDEEEEEEDCRDDFVKTPRSLKPPAVLECPPPPR 64
           PKEDKFEILLSTLEL+L   S C R E+EE+ +E   DD VKTPRSL+P A+LECPPPPR
Sbjct: 7   PKEDKFEILLSTLELRLPLSSFCLRPEEEEDNDEARPDDLVKTPRSLEPAAILECPPPPR 66

Query: 65  KPRRLPSMKRKAGGGRSIFMSHHCLFGEMEVDLELLFPSNQLHGG 107
           KPRRLPS++++  GGR  FM H  +FGEM+  LE+LFPSN    G
Sbjct: 67  KPRRLPSVRKRKAGGRLTFMPHDYVFGEMK-SLEVLFPSNLFDVG 110

BLAST of Cp4.1LG05g09190 vs. ExPASy TrEMBL
Match: A0A6J1G7X1 (cyclin-dependent protein kinase inhibitor SMR10-like OS=Cucurbita moschata OX=3662 GN=LOC111451555 PE=4 SV=1)

HSP 1 Score: 221 bits (563), Expect = 1.18e-72
Identity = 111/120 (92.50%), Postives = 113/120 (94.17%), Query Frame = 0

Query: 1   MEHHPKEDKFEILLSTLELKLQSSCFRHEDEEE-EEEDCRDDFVKTPRSLKPPAVLECPP 60
           MEHH KEDKFEILLSTLELKLQSSCFR EDE+E EEEDCRDDFVKTPRSL+PPAVLECPP
Sbjct: 1   MEHHQKEDKFEILLSTLELKLQSSCFRREDEDEKEEEDCRDDFVKTPRSLEPPAVLECPP 60

Query: 61  PPRKPRRLPSMKRKAGGGRSIFMSHHCLFGEMEVDLELLFPSNQLHGGRIVKKVKRRRFF 119
           PPRKPRR PS KRKAG  RSIFMSHHCLFGEMEVDLELLFPSNQLHGGRIVKKVKRRRFF
Sbjct: 61  PPRKPRRFPSAKRKAGDSRSIFMSHHCLFGEMEVDLELLFPSNQLHGGRIVKKVKRRRFF 120

BLAST of Cp4.1LG05g09190 vs. ExPASy TrEMBL
Match: A0A6J1KYS4 (cyclin-dependent protein kinase inhibitor SMR14-like OS=Cucurbita maxima OX=3661 GN=LOC111499465 PE=4 SV=1)

HSP 1 Score: 211 bits (538), Expect = 7.44e-69
Identity = 109/120 (90.83%), Postives = 113/120 (94.17%), Query Frame = 0

Query: 1   MEHHP-KEDKFEILLSTLELKLQSSCFRHEDEEEEEEDCRDDFVKTPRSLKPPAVLECPP 60
           MEHHP KEDKFEILLSTLELKLQSSCFRHEDEEEEE DCRDDFVKTPRSL+P  VL+CPP
Sbjct: 1   MEHHPQKEDKFEILLSTLELKLQSSCFRHEDEEEEE-DCRDDFVKTPRSLEPAVVLQCPP 60

Query: 61  PPRKPRRLPSMKRKAGGGRSIFMSHHCLFGEMEVDLELLFPSNQLHGGRIVKKVKRRRFF 119
           PPRKPRRLPS KRKAG GRSIFMSH+CLF EMEVDLELLFPSNQL+GGRIVKKVKRRRFF
Sbjct: 61  PPRKPRRLPSAKRKAGVGRSIFMSHNCLFREMEVDLELLFPSNQLYGGRIVKKVKRRRFF 119

BLAST of Cp4.1LG05g09190 vs. ExPASy TrEMBL
Match: A0A0A0KHB1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G190470 PE=4 SV=1)

HSP 1 Score: 102 bits (254), Expect = 1.49e-25
Identity = 69/117 (58.97%), Postives = 84/117 (71.79%), Query Frame = 0

Query: 6   KEDKFEILLSTLELKLQ----SSCFRHEDEEEEEEDCRDDFVKTPRSLKPPAV-LECPPP 65
           K +KFEILLSTLEL+L     S C   +  +E+E D  DD +KTPRSL+P +V L+CPPP
Sbjct: 11  KLEKFEILLSTLELRLPLPLPSFCCLGD--KEKEVDRGDDLMKTPRSLEPTSVVLQCPPP 70

Query: 66  PRKPRRLPSM-KRKAGGG--RSIFMSHHCLFGEMEVDLELLFPSNQLHGGRIVKKVK 114
           PRKPRR PS  KRKAGGG  RSI MSH   F ++E+D   LFPSN + GG+IVKK+K
Sbjct: 71  PRKPRRFPSAAKRKAGGGGGRSILMSHDYFFRDVELDW--LFPSNVV-GGKIVKKIK 122

BLAST of Cp4.1LG05g09190 vs. ExPASy TrEMBL
Match: A0A6P3Z9D7 (cyclin-dependent protein kinase inhibitor SMR10 OS=Ziziphus jujuba OX=326968 GN=LOC107411099 PE=4 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 1.43e-11
Identity = 50/118 (42.37%), Postives = 71/118 (60.17%), Query Frame = 0

Query: 8   DKFEILLSTLELKL---QSSCFRHEDEEEEEEDCRDDFVKTPRSL--KPPAVLECPPPPR 67
           DKF++L+S+L+LK+   Q    + +D++++ +D  D F KTP S   K PA L CPP PR
Sbjct: 75  DKFDVLVSSLKLKIPSVQEFRVKEDDKDDDNKDNNDGF-KTPTSSDQKIPATLHCPPAPR 134

Query: 68  KPRRLP--SMKRKAGGGRSIFMSHHCLFGEMEVDLELLFPS---NQLHGGRIVKKVKR 115
           KP+ LP  SMKRKA G       H  +  +M  ++E LFP      L GG+I KKV++
Sbjct: 135 KPKSLPLSSMKRKAHG------RHRQVLLDMSNEIESLFPPVLLADLGGGKIKKKVRK 185

BLAST of Cp4.1LG05g09190 vs. ExPASy TrEMBL
Match: B9T5R7 (Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_0449900 PE=4 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 3.25e-11
Identity = 46/114 (40.35%), Postives = 73/114 (64.04%), Query Frame = 0

Query: 6   KEDKFEILLSTLELKLQS-SCFRHEDEEEEEEDCRDDFVKTPRSL--KPPAVLECPPPPR 65
           +EDK ++L+STL++KL S   F+ +++E+E++D  DD  KTP SL  K P +L CPP PR
Sbjct: 61  QEDKCKLLISTLKIKLPSLGEFKIQEQEQEQQDL-DDGCKTPTSLNHKIPTLLPCPPAPR 120

Query: 66  KPRRLPSMKRKAGGGRSIFMSHHCLFGEMEVDLELLFP-SNQLHGGRIVKKVKR 115
           KP+ LPS KRK+   R + +       ++  ++E LFP + +   G  +KKV++
Sbjct: 121 KPKSLPSNKRKSPARRRVLL-------DLSNEIESLFPPALRADLGAKIKKVRQ 166

BLAST of Cp4.1LG05g09190 vs. TAIR 10
Match: AT5G59360.1 (unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 42.7 bits (99), Expect = 2.3e-04
Identity = 39/134 (29.10%), Postives = 67/134 (50.00%), Query Frame = 0

Query: 6   KEDKFEILLSTLELKLQSSCFR-HEDEEEEEE--------------DCRDD-----FVKT 65
           K D  +  LS    + QS+  R H+  ++++E              +C+D+       +T
Sbjct: 30  KSDSLDSSLSRHHQENQSNRQRNHQHRQQDQELENLQDGSRGKRKWECKDEESPVKIPET 89

Query: 66  PRSLKPPAVLECPP-PPRKPRRLPSMKRKAGGGRSIFMSHHCLFGEMEVDLELLFPSNQL 119
           PR+    +V  CPP PPRKP+ +PSMKR     R +++    +F ++  ++E +FP + L
Sbjct: 90  PRNSN--SVCYCPPRPPRKPKAIPSMKR-----RGMWVKRSVVFLDVAREVESMFPPSVL 149

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
XP_023532326.13.35e-81100.00cyclin-dependent protein kinase inhibitor SMR14 [Cucurbita pepo subsp. pepo][more]
KAG6605463.15.13e-7494.17hypothetical protein SDJN03_02780, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_022947800.12.44e-7292.50cyclin-dependent protein kinase inhibitor SMR10-like [Cucurbita moschata][more]
XP_023006801.11.54e-6890.83cyclin-dependent protein kinase inhibitor SMR14-like [Cucurbita maxima][more]
KAG6570710.14.86e-3263.81hypothetical protein SDJN03_29625, partial [Cucurbita argyrosperma subsp. sorori... [more]
Match NameE-valueIdentityDescription
A0A6J1G7X11.18e-7292.50cyclin-dependent protein kinase inhibitor SMR10-like OS=Cucurbita moschata OX=36... [more]
A0A6J1KYS47.44e-6990.83cyclin-dependent protein kinase inhibitor SMR14-like OS=Cucurbita maxima OX=3661... [more]
A0A0A0KHB11.49e-2558.97Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G190470 PE=4 SV=1[more]
A0A6P3Z9D71.43e-1142.37cyclin-dependent protein kinase inhibitor SMR10 OS=Ziziphus jujuba OX=326968 GN=... [more]
B9T5R73.25e-1140.35Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_0449900 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT5G59360.12.3e-0429.10unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0... [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 28..76

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG05g09190.1Cp4.1LG05g09190.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0010564 regulation of cell cycle process