CmoCh20G011650.1 (mRNA) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh20G011650.1
Type	mRNA
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	zinc finger CCCH domain-containing protein 62-like
Location	Cmo_Chr20: 11472942 .. 11476433 (+)
Sequence length	1136
RNA-Seq Expression	CmoCh20G011650.1
Synteny	CmoCh20G011650.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGGAAATGCCTGAAAGGGGTAGCAAACGAAGAGTTATTTATCTCTCCTCGTCGTCGGAGGAGGACGAAGAGGAATCAGACGATGAGGAAGGGGAATGGGAAGAGGAGTTTGATAATGAATGCAGCGACAACGATTGTGATGAACTTCTCTCCCAGCGAGTCATCCGCTTTCTTAAAGGTATTTTTAGACCGCTTCGTCTTTTTCCATTGATAATTCGCCATTGTGTTGAGATTCGAGTTCAAAGTCGAAGTGTCGATTGAGAGAAATGAAATCGATGATTAGATAGGTTGTTGGGAAATTCATAGGGTATTGGATCTCTTAATTATCTGATTTGAAACATGTTCTGTCGCAGAGAATAAAAATTTAGATTCGTTAACACTTCATGATTGCAAAGCTTATTTACGGGAGAATAGGCTAAGAATAGCGGGGACTAAAGCCGTCTGTATTCAAAGAGTCCTGGAACATTGGAGGTACGTGGATCCTTCATCCTTAAACTCAAGATACACATCTTAATATTGCGTTCAATTAGGAAATTTATGAAGTTTCGTCATCTAGTCCGATCGCTGAATATTTGAAATTGTTAGTACTTTTTCATGATGGAAATCTGCTATGTACTCATCTATGGAAGTCTTCTGATATTTAGAGAAGCGACTATTGAGTGTTTCGGTAAATGTGGATTGTTATCAATTATGATTCTATAGACTTTTATGTTGTGAAATTGAGTTTTCCTTGTTCCTCAATGGATTTTGGAGCCTTTAACTTCTAGTTCTGCATTGATACATATCAAACCATAAGGCAGCAAAACATAATTTGGGTTTGGTACTGTTTTCCATTTGTTGCTGATAAATCTTGATTAACTGAACTGTATTCTACGTCTTCCTTTCTGTTGTAATCACTTTGGGTCTCTGCAAAGTTGCAACATTATATAGAAGTTATTGAGCAAAAAGGGAGGAGATTCTGAAAGAATAATATGCCAGTTATTCAATTCTTCACGAGTTAAATATACAATAGGTATTTGGCACAACTTGTGAGATCCCACATCGGTTGGAGCGGGGAATGAAACATTTTTTATAAGGGTGTGGAAACCTCTCCCTAGTAAATGCGTTTTAAAACCGTGAAGCTGACGTCAATATATGACGGGCCAAAATAGACAATATCTGCTAGTGGTGGTTGTTACAAATGGTATCAAAGCTAGGCACCGAGCAGTGTGCTAGTGAGGACGCTGGGCCCCCAAGGGGGGTGGATTGTGAGATCCTACATTGTTCGGAGAGGGGAACGAAGCATTCCTTATAAGGGTGTGAAACGTCTCCCTAGTAGACGCGTTTCAAACCATGAAACTAACAGCGATATGTAACGGGCCAAAGCGGACAATATCTGTTAGTGGTGACTATTACACAACTACTCCTAACAAAACTACTCCTAACAAAACTTCTTTGCTCTCTCTTCTTTTTCTCCCAACTCAGGATGAAGGATGGAAATGGTGAAGCGCACTATCCAAGGTCATCCTTTGTTGTCAATTGTACTGGTAATTTCTATATACATTAGTCATAGTATTTTCTTTGATCACTCTTTTAGTGGCTGTAATTATTCTATTAAAACATCAATGCAGGTGATGTTTGTAGGGGAGATACTGTTTTGTTCACTCAGAAAGTTTATGCAAAGTACTCAAACAAGTTTCTCTTCCACCACTAGTCTTGTGTTAGATATTTTAGATTTGCACTCCTAATTCTTGTAGCTTAATTTTTAACAGGTTTGATAAAGTAACTAGGCGTGGAGGGCTTATAGGGAAGAGAACTGTGGCAGGGAGGGTAGTGAAGGAAAGCTATGGTGCAAGTAAACAGCAGCATACTTTTACTGTAAGGCGGTTTTTTCTGTTCTAGCAATCATTTTCTCATATCGTAATTCAAATTGGTTGTGCATTATTAGTATCATACTTTGTAATATGCTCAATATGTTTACATCTAATATTCATTTGCGATTCATAAATATTTTTTCATTTTCGATTCATATTTCCAACGCTTGTGACTATAACGTGCTAGGTTGAAGTTCTATGGAGCAGGGGAGTTCGGAAGTTACCCCCACTTTATCCTCTACTTGTTAAGGGTCGAAATCTCTATAAACTAAGAACATTCAGACGGGTAAGTTCTCTACGTACATAAATATATTTTATTTTCATACAAAGCATTTGGGTTGTGGGGATTTGAACTGTGGATGAAAATTTTAAATCAAATTGATTTTTTTAGTTGAACCATTGCTGGTGGAAGTGTACGTATGTAGATGGGAATTTAGTAACAGAACAATGCTCATTGTGCTTAAATTCTCAAGCATGAACCAAGTGAGTGAGTTTGGCTCCAAGATATCCATCCTTTCCAAATTTGTATAAAAGAGCTAAAGTTCTACGAAATATGACTTCTAAAGTGTGTATCGTCACCTGCACATATTATGATATGTGCTCCAGGCGACTGATGGATGTCATTCTTCTTGTTGAGCTTGTTTGATTGAATTTTGTACATTAGGTGATTGATAGGGATATCTCTCTAATAAAAAATGTATGAATGAATAGAGTATGGTTTCCTATGTCATAGGTGATCGATAGGAATATCTCCTTAGCAAAGCATGTATGAGCGAACCAAACTAAGATTAGGGTGGTGGAGCTAGAGCAGATTATATGTTGACATAGGTCAGTACGTTCTCAGTAGACCTAGCACAGCGGTGTTCATGAGTGGCGTTTGGCTCCAAGATATTCGTCCTTTCCAAATTTGTATAAAAGAGCTGAAGTTTGTATGTCAGATCTTGTTTCTGATCATAAATGCAAGCCAACGACCAATATTGCTGAGTTTTCTTCATTATTTGTATGTTTTACTCAGCTTTGGAATGATGAAGCTGAAAGAGTTCAGGTTCTAGCAGAGAAGCACAAAAGAGGTGCGGCTGCTCGGGGTGTACGAGCATTGCAGAAAAGGAAAAGAAAACTTGTACAAATGGGAGGTATAATTCACAACCACTACTCCCCGAAACATGAATAGGAGCTTGCTTGCCGCAATTGAATAAAAGATTGAATGTTACCATATTTTTGTATTGTAATGTCCAGGAAGTGGAAAGAATCAAGGACATGTTCAACTTCCAAGACAAGCCTCGAACAGTAACGGGAGTCGCAAGAGTATGCGTTCAAGGGACAAGAACAATGCTGTTCGTAGGCACCCAGCGTAGGAAGACAGAATGGACATCGAAAAATATAGTGGTCTGCTCTTGAGCTCACAAATGGCCTTTGAACTTGCGTTACAAATTGCTCTTTTAAGTTTGAAAAGGAATCAGTGAATAACTATTCAAATAATGTAACCAAAATTGACTTCAAAGTAGCAGGAAAAGTCAAAACAGGCATTTAGGTTCATTTGTAAATGTAATTAGCCTTTACTTTCACGATATCTTGTGATAAAATAAGGTTTTAAATGAATTTAACTAGATATCTCATATATTAAATTCATATTATGTTTT

mRNA sequence

AGGAAATGCCTGAAAGGGGTAGCAAACGAAGAGTTATTTATCTCTCCTCGTCGTCGGAGGAGGACGAAGAGGAATCAGACGATGAGGAAGGGGAATGGGAAGAGGAGTTTGATAATGAATGCAGCGACAACGATTGTGATGAACTTCTCTCCCAGCGAGTCATCCGCTTTCTTAAAGAGAATAAAAATTTAGATTCGTTAACACTTCATGATTGCAAAGCTTATTTACGGGAGAATAGGCTAAGAATAGCGGGGACTAAAGCCGTCTGTATTCAAAGAGTCCTGGAACATTGGAGGATGAAGGATGGAAATGGTGAAGCGCACTATCCAAGGTCATCCTTTGTTGTCAATTGTACTGGTGATGTTTGTAGGGGAGATACTGTTTTGTTCACTCAGAAAGTTTATGCAAAGTTTGATAAAGTAACTAGGCGTGGAGGGCTTATAGGGAAGAGAACTGTGGCAGGGAGGGTAGTGAAGGAAAGCTATGGTGCAAGTAAACAGCAGCATACTTTTACTGTTGAAGTTCTATGGAGCAGGGGAGTTCGGAAGTTACCCCCACTTTATCCTCTACTTGTTAAGGGTCGAAATCTCTATAAACTAAGAACATTCAGACGGCTTTGGAATGATGAAGCTGAAAGAGTTCAGGTTCTAGCAGAGAAGCACAAAAGAGGTGCGGCTGCTCGGGGTGTACGAGCATTGCAGAAAAGGAAAAGAAAACTTGTACAAATGGGAGGAAGTGGAAAGAATCAAGGACATGTTCAACTTCCAAGACAAGCCTCGAACAGTAACGGGAGTCGCAAGAGTATGCGTTCAAGGGACAAGAACAATGCTGTTCGTAGGCACCCAGCGTAGGAAGACAGAATGGACATCGAAAAATATAGTGGTCTGCTCTTGAGCTCACAAATGGCCTTTGAACTTGCGTTACAAATTGCTCTTTTAAGTTTGAAAAGGAATCAGTGAATAACTATTCAAATAATGTAACCAAAATTGACTTCAAAGTAGCAGGAAAAGTCAAAACAGGCATTTAGGTTCATTTGTAAATGTAATTAGCCTTTACTTTCACGATATCTTGTGATAAAATAAGGTTTTAAATGAATTTAACTAGATATCTCATATATTAAATTCATATTATGTTTT

Coding sequence (CDS)

ATGCCTGAAAGGGGTAGCAAACGAAGAGTTATTTATCTCTCCTCGTCGTCGGAGGAGGACGAAGAGGAATCAGACGATGAGGAAGGGGAATGGGAAGAGGAGTTTGATAATGAATGCAGCGACAACGATTGTGATGAACTTCTCTCCCAGCGAGTCATCCGCTTTCTTAAAGAGAATAAAAATTTAGATTCGTTAACACTTCATGATTGCAAAGCTTATTTACGGGAGAATAGGCTAAGAATAGCGGGGACTAAAGCCGTCTGTATTCAAAGAGTCCTGGAACATTGGAGGATGAAGGATGGAAATGGTGAAGCGCACTATCCAAGGTCATCCTTTGTTGTCAATTGTACTGGTGATGTTTGTAGGGGAGATACTGTTTTGTTCACTCAGAAAGTTTATGCAAAGTTTGATAAAGTAACTAGGCGTGGAGGGCTTATAGGGAAGAGAACTGTGGCAGGGAGGGTAGTGAAGGAAAGCTATGGTGCAAGTAAACAGCAGCATACTTTTACTGTTGAAGTTCTATGGAGCAGGGGAGTTCGGAAGTTACCCCCACTTTATCCTCTACTTGTTAAGGGTCGAAATCTCTATAAACTAAGAACATTCAGACGGCTTTGGAATGATGAAGCTGAAAGAGTTCAGGTTCTAGCAGAGAAGCACAAAAGAGGTGCGGCTGCTCGGGGTGTACGAGCATTGCAGAAAAGGAAAAGAAAACTTGTACAAATGGGAGGAAGTGGAAAGAATCAAGGACATGTTCAACTTCCAAGACAAGCCTCGAACAGTAACGGGAGTCGCAAGAGTATGCGTTCAAGGGACAAGAACAATGCTGTTCGTAGGCACCCAGCGTAG

Protein sequence

MPERGSKRRVIYLSSSSEEDEEESDDEEGEWEEEFDNECSDNDCDELLSQRVIRFLKENKNLDSLTLHDCKAYLRENRLRIAGTKAVCIQRVLEHWRMKDGNGEAHYPRSSFVVNCTGDVCRGDTVLFTQKVYAKFDKVTRRGGLIGKRTVAGRVVKESYGASKQQHTFTVEVLWSRGVRKLPPLYPLLVKGRNLYKLRTFRRLWNDEAERVQVLAEKHKRGAAARGVRALQKRKRKLVQMGGSGKNQGHVQLPRQASNSNGSRKSMRSRDKNNAVRRHPA

Homology

[Close]

BLAST of CmoCh20G011650.1 vs. ExPASy Swiss-Prot
Match: Q338N2 (Zinc finger CCCH domain-containing protein 62 OS=Oryza sativa subsp. japonica OX=39947 GN=Os10g0391300 PE=4 SV=2)

HSP 1 Score: 168.3 bits (425), Expect = 1.2e-40
Identity = 114/318 (35.85%), Postives = 162/318 (50.94%), Query Frame = 0


Query: 3   ERGSKRRVIYLSSSSEEDEEESDDEEGEWEEEFDNECS---------------------- 62
           E GS+  V        +DEEE + E  +W EE D E +                      
Sbjct: 25  EEGSEEEV------ESDDEEEEEGEGYDWSEEDDPEAASLAGICDPDAGSYDDPTFDPAA 84

Query: 63  --DNDCDELLSQRVIRF------------------------------LKENKNLDSLTLH 122
             D + D +L  R+ R                               L  +  L+ L ++
Sbjct: 85  DGDLEVDAVLRSRMARMSLSSARKDRKGSRMPKMGKEEMDLLAMVDKLMHDGQLEKLKVY 144

Query: 123 DCKAYLRENRLRIAGTKAVCIQRVLEHWRMKDGNGEAHYPRSSFVVNCTGDVCRGDTVLF 182
           +CKAYLR ++LR++G K V + R+     +K   GE  YP SSFV+NC GD C+GD V+F
Sbjct: 145 ECKAYLRMHKLRLSGNKEVLLTRIRGQIEVKT-MGEVKYPVSSFVLNCQGDSCKGDVVVF 204

Query: 183 TQKVYAKFDKVTR--RGGLIGKRTVAGRVVKESYGASKQQHTFTVEVLWSRGVRKLPPLY 242
            Q +Y +     R  +G L G+RT AGR++KESYG  KQQHTFT+E+LWSRG +  PPL+
Sbjct: 205 EQNIYKRKKGAPRGVKGHLCGQRTNAGRIIKESYGTKKQQHTFTIEILWSRGYKPWPPLH 264

Query: 243 PLLVKGRNLYKLRTFRRLWNDEAERVQVLAEKHKRGAAARGVRALQKRKRKLVQMGGSGK 265
           PLL+KGRNLYK +T R+ W DE ER + L EKH RG  AR  R ++ + ++  +M    +
Sbjct: 265 PLLIKGRNLYKDKTMRQPWLDEEERNRALQEKHARGYVARKTREVRIKDKENERMRRLNR 324

[Close]

BLAST of CmoCh20G011650.1 vs. ExPASy TrEMBL
Match: A0A6J1EQD5 (zinc finger CCCH domain-containing protein 62-like OS=Cucurbita moschata OX=3662 GN=LOC111434886 PE=4 SV=1)

HSP 1 Score: 549.3 bits (1414), Expect = 9.5e-153
Identity = 281/281 (100.00%), Postives = 281/281 (100.00%), Query Frame = 0


Query: 1   MPERGSKRRVIYLSSSSEEDEEESDDEEGEWEEEFDNECSDNDCDELLSQRVIRFLKENK 60
           MPERGSKRRVIYLSSSSEEDEEESDDEEGEWEEEFDNECSDNDCDELLSQRVIRFLKENK
Sbjct: 1   MPERGSKRRVIYLSSSSEEDEEESDDEEGEWEEEFDNECSDNDCDELLSQRVIRFLKENK 60

Query: 61  NLDSLTLHDCKAYLRENRLRIAGTKAVCIQRVLEHWRMKDGNGEAHYPRSSFVVNCTGDV 120
           NLDSLTLHDCKAYLRENRLRIAGTKAVCIQRVLEHWRMKDGNGEAHYPRSSFVVNCTGDV
Sbjct: 61  NLDSLTLHDCKAYLRENRLRIAGTKAVCIQRVLEHWRMKDGNGEAHYPRSSFVVNCTGDV 120

Query: 121 CRGDTVLFTQKVYAKFDKVTRRGGLIGKRTVAGRVVKESYGASKQQHTFTVEVLWSRGVR 180
           CRGDTVLFTQKVYAKFDKVTRRGGLIGKRTVAGRVVKESYGASKQQHTFTVEVLWSRGVR
Sbjct: 121 CRGDTVLFTQKVYAKFDKVTRRGGLIGKRTVAGRVVKESYGASKQQHTFTVEVLWSRGVR 180

Query: 181 KLPPLYPLLVKGRNLYKLRTFRRLWNDEAERVQVLAEKHKRGAAARGVRALQKRKRKLVQ 240
           KLPPLYPLLVKGRNLYKLRTFRRLWNDEAERVQVLAEKHKRGAAARGVRALQKRKRKLVQ
Sbjct: 181 KLPPLYPLLVKGRNLYKLRTFRRLWNDEAERVQVLAEKHKRGAAARGVRALQKRKRKLVQ 240

Query: 241 MGGSGKNQGHVQLPRQASNSNGSRKSMRSRDKNNAVRRHPA 282
           MGGSGKNQGHVQLPRQASNSNGSRKSMRSRDKNNAVRRHPA
Sbjct: 241 MGGSGKNQGHVQLPRQASNSNGSRKSMRSRDKNNAVRRHPA 281

[Close]

BLAST of CmoCh20G011650.1 vs. ExPASy TrEMBL
Match: A0A6J1I2K8 (zinc finger CCCH domain-containing protein 62 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111470342 PE=4 SV=1)

HSP 1 Score: 514.2 bits (1323), Expect = 3.4e-142
Identity = 265/288 (92.01%), Postives = 274/288 (95.14%), Query Frame = 0


Query: 1   MPERGSKRRVIYLSSSSEEDEEES-------DDEEGEWEEEFDNECSDNDCDELLSQRVI 60
           MPERGSKRRV+YL SSSE+DEEES       DD+EGE E+EFDNECSDNDCDE+LSQRVI
Sbjct: 1   MPERGSKRRVVYLYSSSEDDEEESDEEYDDEDDDEGESEKEFDNECSDNDCDEVLSQRVI 60

Query: 61  RFLKENKNLDSLTLHDCKAYLRENRLRIAGTKAVCIQRVLEHWRMKDGNGEAHYPRSSFV 120
           RFLKENKNLDSLTLHDCKAYLRENRLRIAGTKAVCIQR+ EHWRMKDGNGE HYPRSSFV
Sbjct: 61  RFLKENKNLDSLTLHDCKAYLRENRLRIAGTKAVCIQRLQEHWRMKDGNGEVHYPRSSFV 120

Query: 121 VNCTGDVCRGDTVLFTQKVYAKFDKVTRRGGLIGKRTVAGRVVKESYGASKQQHTFTVEV 180
           VNCTGDVCRGDTVLFTQKVYAKFDKVTRRGGLIGKRTVAGRVVKESYGASKQQHTFTVEV
Sbjct: 121 VNCTGDVCRGDTVLFTQKVYAKFDKVTRRGGLIGKRTVAGRVVKESYGASKQQHTFTVEV 180

Query: 181 LWSRGVRKLPPLYPLLVKGRNLYKLRTFRRLWNDEAERVQVLAEKHKRGAAARGVRALQK 240
           LWSRGVRKLPPLYPLLVKGRNLYKLRTFRRLWNDEAER+QVLAEKHKRGAAARGVRALQK
Sbjct: 181 LWSRGVRKLPPLYPLLVKGRNLYKLRTFRRLWNDEAERIQVLAEKHKRGAAARGVRALQK 240

Query: 241 RKRKLVQMGGSGKNQGHVQLPRQASNSNGSRKSMRSRDKNNAVRRHPA 282
           RKRKL+Q+GGSGKNQG  QLPRQA NSNGSRKSMRSRDKNNAVRRHPA
Sbjct: 241 RKRKLLQIGGSGKNQGRAQLPRQALNSNGSRKSMRSRDKNNAVRRHPA 288

[Close]

BLAST of CmoCh20G011650.1 vs. ExPASy TrEMBL
Match: A0A1S4E1S9 (zinc finger CCCH domain-containing protein 62-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103497448 PE=4 SV=1)

HSP 1 Score: 424.1 bits (1089), Expect = 4.6e-115
Identity = 230/306 (75.16%), Postives = 248/306 (81.05%), Query Frame = 0


Query: 1   MPERGSKRRVIYLSSSSEEDEEES-----------------------------DDEEGEW 60
           M +RGSKR VI +SSSS++DEEES                             DD+EGE 
Sbjct: 30  MSKRGSKRTVICISSSSDDDEEESVEYDDEDDGVGDSEEEFHDEDDGDVNSEEDDDEGES 89

Query: 61  EEEFDNECSDNDCDE-LLSQRVIRFLKENKNLDSLTLHDCKAYLRENRLRIAGTKAVCIQ 120
            EEFD+E SDN CDE +LS+RVIRFLKENKNLDSLTL+DCKAYLRENRLRIAGTKAVCIQ
Sbjct: 90  GEEFDDEESDNGCDEGVLSKRVIRFLKENKNLDSLTLNDCKAYLRENRLRIAGTKAVCIQ 149

Query: 121 RVLEHWRMKDGNGEAHYPRSSFVVNCTGDVCRGDTVLFTQKVYAKFDKVTRRGGLIGKRT 180
           RV EHWR+KDGNGE  YPRSSFVVNCTGDVCRGDTVLFTQKVYAKFDKVTR GGLIGKRT
Sbjct: 150 RVKEHWRLKDGNGEVQYPRSSFVVNCTGDVCRGDTVLFTQKVYAKFDKVTRHGGLIGKRT 209

Query: 181 VAGRVVKESYGASKQQHTFTVEVLWSRGVRKLPPLYPLLVKGRNLYKLRTFRRLWNDEAE 240
           VAGRVVKESYGASKQQHTFTVEVLW RGVRKLPPLYPLLVKGRNLYKLRTFRRLWNDEAE
Sbjct: 210 VAGRVVKESYGASKQQHTFTVEVLWIRGVRKLPPLYPLLVKGRNLYKLRTFRRLWNDEAE 269

Query: 241 RVQVLAEKHKRGAAARGVRALQKRKRKLVQMGGSGKNQGHVQLPRQASNSNGSRKSMRSR 277
           RVQVLAEKH+RGAAAR +RA+QK+KRK++Q  G  KNQGHV L RQ   S   R+ M SR
Sbjct: 270 RVQVLAEKHRRGAAARDLRAMQKKKRKIIQTKGCAKNQGHVHLARQPLKSKEKRQRMPSR 329

[Close]

BLAST of CmoCh20G011650.1 vs. ExPASy TrEMBL
Match: A0A5A7TS31 (Zinc finger CCCH domain-containing protein 62-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold299G002520 PE=4 SV=1)

HSP 1 Score: 423.3 bits (1087), Expect = 7.8e-115
Identity = 231/307 (75.24%), Postives = 248/307 (80.78%), Query Frame = 0


Query: 1   MPERGSKRRVIYLSSSSEEDEEES-----------------------------DDEEGEW 60
           M +RGSKR VI +SSSS++DEEES                             DD+EGE 
Sbjct: 1   MSKRGSKRTVICISSSSDDDEEESVEYDDEDDGVGDSEEEFHDEDDGDVNSEEDDDEGES 60

Query: 61  EEEFDNECSDNDCDE-LLSQRVIRFLKENKNLDSLTLHDCKAYLRENRLRIAGTKAVCIQ 120
            EEFD+E SDN CDE +LS+RVIRFLKENKNLDSLTL+DCKAYLRENRLRIAGTKAVCIQ
Sbjct: 61  GEEFDDEESDNGCDEGVLSKRVIRFLKENKNLDSLTLNDCKAYLRENRLRIAGTKAVCIQ 120

Query: 121 RVLEHWRMKDGNGEAHYPRSSFVVNCTGDVCRGDTVLFTQKVYAKFDKVTRRGGLIGKRT 180
           RV EHWR+KDGNGE  YPRSSFVVNCTGDVCRGDTVLFTQKVYAKFDKVTR GGLIGKRT
Sbjct: 121 RVKEHWRLKDGNGEVQYPRSSFVVNCTGDVCRGDTVLFTQKVYAKFDKVTRHGGLIGKRT 180

Query: 181 VAGRVVKESYGASKQQHTFTVEVLWSRGVRKLPPLYPLLVKGRNLYKLRTFRRLWNDEAE 240
           VAGRVVKESYGASKQQHTFTVEVLW RGVRKLPPLYPLLVKGRNLYKLRTFRRLWNDEAE
Sbjct: 181 VAGRVVKESYGASKQQHTFTVEVLWIRGVRKLPPLYPLLVKGRNLYKLRTFRRLWNDEAE 240

Query: 241 RVQVLAEKHKRGAAARGVRALQKRKRKLVQMGGSGKNQGHVQLPRQASNSNGSRKSMRSR 278
           RVQVLAEKH+RGAAAR +RA+QK+KRK++Q  G  KNQGHV L RQ   S   R+ M SR
Sbjct: 241 RVQVLAEKHRRGAAARDLRAMQKKKRKIIQTKGCAKNQGHVHLARQPLKSKEKRQRMPSR 300

[Close]

BLAST of CmoCh20G011650.1 vs. ExPASy TrEMBL
Match: A0A1S4E1T3 (zinc finger CCCH domain-containing protein 62-like isoform X3 OS=Cucumis melo OX=3656 GN=LOC103497448 PE=4 SV=1)

HSP 1 Score: 423.3 bits (1087), Expect = 7.8e-115
Identity = 231/307 (75.24%), Postives = 248/307 (80.78%), Query Frame = 0


Query: 1   MPERGSKRRVIYLSSSSEEDEEES-----------------------------DDEEGEW 60
           M +RGSKR VI +SSSS++DEEES                             DD+EGE 
Sbjct: 30  MSKRGSKRTVICISSSSDDDEEESVEYDDEDDGVGDSEEEFHDEDDGDVNSEEDDDEGES 89

Query: 61  EEEFDNECSDNDCDE-LLSQRVIRFLKENKNLDSLTLHDCKAYLRENRLRIAGTKAVCIQ 120
            EEFD+E SDN CDE +LS+RVIRFLKENKNLDSLTL+DCKAYLRENRLRIAGTKAVCIQ
Sbjct: 90  GEEFDDEESDNGCDEGVLSKRVIRFLKENKNLDSLTLNDCKAYLRENRLRIAGTKAVCIQ 149

Query: 121 RVLEHWRMKDGNGEAHYPRSSFVVNCTGDVCRGDTVLFTQKVYAKFDKVTRRGGLIGKRT 180
           RV EHWR+KDGNGE  YPRSSFVVNCTGDVCRGDTVLFTQKVYAKFDKVTR GGLIGKRT
Sbjct: 150 RVKEHWRLKDGNGEVQYPRSSFVVNCTGDVCRGDTVLFTQKVYAKFDKVTRHGGLIGKRT 209

Query: 181 VAGRVVKESYGASKQQHTFTVEVLWSRGVRKLPPLYPLLVKGRNLYKLRTFRRLWNDEAE 240
           VAGRVVKESYGASKQQHTFTVEVLW RGVRKLPPLYPLLVKGRNLYKLRTFRRLWNDEAE
Sbjct: 210 VAGRVVKESYGASKQQHTFTVEVLWIRGVRKLPPLYPLLVKGRNLYKLRTFRRLWNDEAE 269

Query: 241 RVQVLAEKHKRGAAARGVRALQKRKRKLVQMGGSGKNQGHVQLPRQASNSNGSRKSMRSR 278
           RVQVLAEKH+RGAAAR +RA+QK+KRK++Q  G  KNQGHV L RQ   S   R+ M SR
Sbjct: 270 RVQVLAEKHRRGAAARDLRAMQKKKRKIIQTKGCAKNQGHVHLARQPLKSKEKRQRMPSR 329

[Close]

BLAST of CmoCh20G011650.1 vs. NCBI nr
Match: XP_022927980.1 (zinc finger CCCH domain-containing protein 62-like [Cucurbita moschata])

HSP 1 Score: 549.3 bits (1414), Expect = 2.0e-152
Identity = 281/281 (100.00%), Postives = 281/281 (100.00%), Query Frame = 0


Query: 1   MPERGSKRRVIYLSSSSEEDEEESDDEEGEWEEEFDNECSDNDCDELLSQRVIRFLKENK 60
           MPERGSKRRVIYLSSSSEEDEEESDDEEGEWEEEFDNECSDNDCDELLSQRVIRFLKENK
Sbjct: 1   MPERGSKRRVIYLSSSSEEDEEESDDEEGEWEEEFDNECSDNDCDELLSQRVIRFLKENK 60

Query: 61  NLDSLTLHDCKAYLRENRLRIAGTKAVCIQRVLEHWRMKDGNGEAHYPRSSFVVNCTGDV 120
           NLDSLTLHDCKAYLRENRLRIAGTKAVCIQRVLEHWRMKDGNGEAHYPRSSFVVNCTGDV
Sbjct: 61  NLDSLTLHDCKAYLRENRLRIAGTKAVCIQRVLEHWRMKDGNGEAHYPRSSFVVNCTGDV 120

Query: 121 CRGDTVLFTQKVYAKFDKVTRRGGLIGKRTVAGRVVKESYGASKQQHTFTVEVLWSRGVR 180
           CRGDTVLFTQKVYAKFDKVTRRGGLIGKRTVAGRVVKESYGASKQQHTFTVEVLWSRGVR
Sbjct: 121 CRGDTVLFTQKVYAKFDKVTRRGGLIGKRTVAGRVVKESYGASKQQHTFTVEVLWSRGVR 180

Query: 181 KLPPLYPLLVKGRNLYKLRTFRRLWNDEAERVQVLAEKHKRGAAARGVRALQKRKRKLVQ 240
           KLPPLYPLLVKGRNLYKLRTFRRLWNDEAERVQVLAEKHKRGAAARGVRALQKRKRKLVQ
Sbjct: 181 KLPPLYPLLVKGRNLYKLRTFRRLWNDEAERVQVLAEKHKRGAAARGVRALQKRKRKLVQ 240

Query: 241 MGGSGKNQGHVQLPRQASNSNGSRKSMRSRDKNNAVRRHPA 282
           MGGSGKNQGHVQLPRQASNSNGSRKSMRSRDKNNAVRRHPA
Sbjct: 241 MGGSGKNQGHVQLPRQASNSNGSRKSMRSRDKNNAVRRHPA 281

[Close]

BLAST of CmoCh20G011650.1 vs. NCBI nr
Match: KAG6571408.1 (Zinc finger CCCH domain-containing protein 62, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 540.0 bits (1390), Expect = 1.2e-149
Identity = 278/281 (98.93%), Postives = 280/281 (99.64%), Query Frame = 0


Query: 1   MPERGSKRRVIYLSSSSEEDEEESDDEEGEWEEEFDNECSDNDCDELLSQRVIRFLKENK 60
           MPERGSKRRVIYLSSSSEEDEEESDDEEGE EEEFDNECSDNDCDELLSQRVIRFLKENK
Sbjct: 1   MPERGSKRRVIYLSSSSEEDEEESDDEEGESEEEFDNECSDNDCDELLSQRVIRFLKENK 60

Query: 61  NLDSLTLHDCKAYLRENRLRIAGTKAVCIQRVLEHWRMKDGNGEAHYPRSSFVVNCTGDV 120
           NLDSLTL+DCKAYLRENRLRIAGTKAVCIQRVLEHWRMKDGNGEAHYPRSSFVVNCTGDV
Sbjct: 61  NLDSLTLNDCKAYLRENRLRIAGTKAVCIQRVLEHWRMKDGNGEAHYPRSSFVVNCTGDV 120

Query: 121 CRGDTVLFTQKVYAKFDKVTRRGGLIGKRTVAGRVVKESYGASKQQHTFTVEVLWSRGVR 180
           CRGDTVLFTQKVYAKFDKVTRRGGLIGKRTVAGRVVKESYGASKQQHTFTVEVLWSRGVR
Sbjct: 121 CRGDTVLFTQKVYAKFDKVTRRGGLIGKRTVAGRVVKESYGASKQQHTFTVEVLWSRGVR 180

Query: 181 KLPPLYPLLVKGRNLYKLRTFRRLWNDEAERVQVLAEKHKRGAAARGVRALQKRKRKLVQ 240
           KLPPLYPLLVKGRNLYKLRTFRRLWNDEAERVQVLAEKHKRGAAARGVRALQKRKRK+VQ
Sbjct: 181 KLPPLYPLLVKGRNLYKLRTFRRLWNDEAERVQVLAEKHKRGAAARGVRALQKRKRKVVQ 240

Query: 241 MGGSGKNQGHVQLPRQASNSNGSRKSMRSRDKNNAVRRHPA 282
           MGGSGKNQGHVQLPRQASNSNGSRKSMRSRDKNNAVRRHPA
Sbjct: 241 MGGSGKNQGHVQLPRQASNSNGSRKSMRSRDKNNAVRRHPA 281

[Close]

BLAST of CmoCh20G011650.1 vs. NCBI nr
Match: XP_023512636.1 (zinc finger CCCH domain-containing protein 62 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 516.5 bits (1329), Expect = 1.4e-142
Identity = 269/289 (93.08%), Postives = 275/289 (95.16%), Query Frame = 0


Query: 1   MPERGSKRRVIYLSSSSEEDEEE--------SDDEEGEWEEEFDNECSDNDCDELLSQRV 60
           MPERGSKRRVIYLSSSSEED+EE         DD+EGE EEEFDN CSDNDCDE+LSQRV
Sbjct: 1   MPERGSKRRVIYLSSSSEEDDEEESDEEYDDEDDDEGESEEEFDNGCSDNDCDEVLSQRV 60

Query: 61  IRFLKENKNLDSLTLHDCKAYLRENRLRIAGTKAVCIQRVLEHWRMKDGNGEAHYPRSSF 120
           IRFLKENKNLDSLTL+DCKAYLRENRLRIAGTKAVCIQR+ EHWRMKDGNGEAHYPRSSF
Sbjct: 61  IRFLKENKNLDSLTLNDCKAYLRENRLRIAGTKAVCIQRLQEHWRMKDGNGEAHYPRSSF 120

Query: 121 VVNCTGDVCRGDTVLFTQKVYAKFDKVTRRGGLIGKRTVAGRVVKESYGASKQQHTFTVE 180
           VVNCTGDVCRGDTVLFTQKVYAKFDKVTRRGGLIGKRTVAGRVVKESYGASKQQHTFTVE
Sbjct: 121 VVNCTGDVCRGDTVLFTQKVYAKFDKVTRRGGLIGKRTVAGRVVKESYGASKQQHTFTVE 180

Query: 181 VLWSRGVRKLPPLYPLLVKGRNLYKLRTFRRLWNDEAERVQVLAEKHKRGAAARGVRALQ 240
           VLWS GVRKLPPLYPLLVKGRNLYKLRTFRRLWNDEAERVQVLAEKHKRGAAARGVRALQ
Sbjct: 181 VLWSTGVRKLPPLYPLLVKGRNLYKLRTFRRLWNDEAERVQVLAEKHKRGAAARGVRALQ 240

Query: 241 KRKRKLVQMGGSGKNQGHVQLPRQASNSNGSRKSMRSRDKNNAVRRHPA 282
           KRKRKLVQ+GGSGKNQGHVQLPRQA NSNGSRKSMRSRDKNNAVRRHPA
Sbjct: 241 KRKRKLVQIGGSGKNQGHVQLPRQALNSNGSRKSMRSRDKNNAVRRHPA 289

[Close]

BLAST of CmoCh20G011650.1 vs. NCBI nr
Match: XP_022971662.1 (zinc finger CCCH domain-containing protein 62 isoform X1 [Cucurbita maxima])

HSP 1 Score: 514.2 bits (1323), Expect = 7.0e-142
Identity = 265/288 (92.01%), Postives = 274/288 (95.14%), Query Frame = 0


Query: 1   MPERGSKRRVIYLSSSSEEDEEES-------DDEEGEWEEEFDNECSDNDCDELLSQRVI 60
           MPERGSKRRV+YL SSSE+DEEES       DD+EGE E+EFDNECSDNDCDE+LSQRVI
Sbjct: 1   MPERGSKRRVVYLYSSSEDDEEESDEEYDDEDDDEGESEKEFDNECSDNDCDEVLSQRVI 60

Query: 61  RFLKENKNLDSLTLHDCKAYLRENRLRIAGTKAVCIQRVLEHWRMKDGNGEAHYPRSSFV 120
           RFLKENKNLDSLTLHDCKAYLRENRLRIAGTKAVCIQR+ EHWRMKDGNGE HYPRSSFV
Sbjct: 61  RFLKENKNLDSLTLHDCKAYLRENRLRIAGTKAVCIQRLQEHWRMKDGNGEVHYPRSSFV 120

Query: 121 VNCTGDVCRGDTVLFTQKVYAKFDKVTRRGGLIGKRTVAGRVVKESYGASKQQHTFTVEV 180
           VNCTGDVCRGDTVLFTQKVYAKFDKVTRRGGLIGKRTVAGRVVKESYGASKQQHTFTVEV
Sbjct: 121 VNCTGDVCRGDTVLFTQKVYAKFDKVTRRGGLIGKRTVAGRVVKESYGASKQQHTFTVEV 180

Query: 181 LWSRGVRKLPPLYPLLVKGRNLYKLRTFRRLWNDEAERVQVLAEKHKRGAAARGVRALQK 240
           LWSRGVRKLPPLYPLLVKGRNLYKLRTFRRLWNDEAER+QVLAEKHKRGAAARGVRALQK
Sbjct: 181 LWSRGVRKLPPLYPLLVKGRNLYKLRTFRRLWNDEAERIQVLAEKHKRGAAARGVRALQK 240

Query: 241 RKRKLVQMGGSGKNQGHVQLPRQASNSNGSRKSMRSRDKNNAVRRHPA 282
           RKRKL+Q+GGSGKNQG  QLPRQA NSNGSRKSMRSRDKNNAVRRHPA
Sbjct: 241 RKRKLLQIGGSGKNQGRAQLPRQALNSNGSRKSMRSRDKNNAVRRHPA 288

[Close]

BLAST of CmoCh20G011650.1 vs. NCBI nr
Match: XP_038902878.1 (zinc finger CCCH domain-containing protein 62-like [Benincasa hispida])

HSP 1 Score: 436.4 bits (1121), Expect = 1.8e-118
Identity = 228/259 (88.03%), Postives = 236/259 (91.12%), Query Frame = 0


Query: 17  SEEDEEESDDEEGEWEEEFDNECSDNDCDELLSQRVIRFLKENKNLDSLTLHDCKAYLRE 76
           SEE+ +  DD EGE EEEFDNE SDNDCDE+LS+RVIRFLKENKNLDSLTL+DCKAYLRE
Sbjct: 56  SEEEFDYKDDVEGESEEEFDNEDSDNDCDEVLSERVIRFLKENKNLDSLTLNDCKAYLRE 115

Query: 77  NRLRIAGTKAVCIQRVLEHWRMKDGNGEAHYPRSSFVVNCTGDVCRGDTVLFTQKVYAKF 136
           NRLRIAGTKAVCIQRV EHWRMKDGNGEAHYPRSSFVVNCTGDVCRGDTVLFTQKVYAKF
Sbjct: 116 NRLRIAGTKAVCIQRVEEHWRMKDGNGEAHYPRSSFVVNCTGDVCRGDTVLFTQKVYAKF 175

Query: 137 DKVTRRGGLIGKRTVAGRVVKESYGASKQQHTFTVEVLWSRGVRKLPPLYPLLVKGRNLY 196
           DKVTR GGLIGKRTVAGRVVKESYGASKQQHTFTVEVLWSRGVRKLPPLYPLLVKGRNLY
Sbjct: 176 DKVTRHGGLIGKRTVAGRVVKESYGASKQQHTFTVEVLWSRGVRKLPPLYPLLVKGRNLY 235

Query: 197 KLRTFRRLWNDEAERVQVLAEKHKRGAAARGVRALQKRKRKLVQMGGSGKNQGHVQLPRQ 256
           KLRTFRRLWNDEAERVQVLAEKHKRGAAARG+RA+QK+KRK  Q  G  KNQGHV L RQ
Sbjct: 236 KLRTFRRLWNDEAERVQVLAEKHKRGAAARGLRAMQKKKRKFPQTRGCAKNQGHVHLARQ 295

Query: 257 ASNSNGSRKSMRSRDKNNA 276
             NS  SRK M SRD NNA
Sbjct: 296 GLNSKESRKRMPSRDYNNA 314

[Close]

BLAST of CmoCh20G011650.1 vs. TAIR 10
Match: AT5G66840.1 (SAP domain-containing protein )

HSP 1 Score: 251.5 bits (641), Expect = 7.8e-67
Identity = 139/281 (49.47%), Postives = 188/281 (66.90%), Query Frame = 0


Query: 12  YLSSSSEEDEE-ESDDEEGEWEEEFDNEC-SDNDCDEL----------LSQRVIRFLKEN 71
           Y  +  EEDE+  S +++ +W  + D+   SD + DE+             +V R L   
Sbjct: 28  YDETEEEEDEDTNSSEDDSDWSHDDDDATESDVEADEIGVKGDNDDGDEDDKVTRLLTAG 87

Query: 72  KNLDSLTLHDCKAYLRENRLRIAGTKAVCIQRVLEHWRMKDGNGEAHYPRSSFVVNCTGD 131
            +L S+ + +CKAYLR++ LR++GTK VCI R+LEHWR+KDG GEA YP+SSF +NC GD
Sbjct: 88  SDLKSVNVKECKAYLRKHGLRLSGTKPVCIDRILEHWRIKDGTGEAVYPKSSFAINCKGD 147

Query: 132 VCRGDTVLFTQKVYAKFDKVTRRGGLIGKRTVAGRVVKESYGASKQQHTFTVEVLWSRGV 191
           VC+GD VLFTQKV+ K++K+ + G ++G+RTVAG+VVKESYG +KQQHTFT+EVLW  G 
Sbjct: 148 VCKGDIVLFTQKVHHKYEKMKKSGNIMGRRTVAGQVVKESYGTAKQQHTFTIEVLWCEGT 207

Query: 192 RKLPPLYPLLVKGRNLYKLRTFRRLWNDEAERVQVLAEKHKRGAAARGVRALQKRKRKLV 251
           +KLPPLYPLLVKGRNLY+L T R+ W +E +RV+VL EKH RGAAAR V   +K K   V
Sbjct: 208 QKLPPLYPLLVKGRNLYRLMTLRQRWPNEEDRVKVLNEKHNRGAAARKVMRERKIKSGYV 267

Query: 252 QMGGSGKNQGHVQLPRQA-SNSNGSRKSMRSRDKNNAVRRH 280
              G  +  GHV+ P Q  +  N   +++  R + N    H
Sbjct: 268 LKDGRLQKPGHVKKPCQVKTRKNEKDENLTQRLRQNTPANH 308

The following BLAST results are available for this feature:

BLAST of CmoCh20G011650.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q338N2	1.2e-40	35.85	Zinc finger CCCH domain-containing protein 62 OS=Oryza sativa subsp. japonica OX...	[more]

BLAST of CmoCh20G011650.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EQD5	9.5e-153	100.00	zinc finger CCCH domain-containing protein 62-like OS=Cucurbita moschata OX=3662...	[more]
A0A6J1I2K8	3.4e-142	92.01	zinc finger CCCH domain-containing protein 62 isoform X1 OS=Cucurbita maxima OX=...	[more]
A0A1S4E1S9	4.6e-115	75.16	zinc finger CCCH domain-containing protein 62-like isoform X1 OS=Cucumis melo OX...	[more]
A0A5A7TS31	7.8e-115	75.24	Zinc finger CCCH domain-containing protein 62-like isoform X1 OS=Cucumis melo va...	[more]
A0A1S4E1T3	7.8e-115	75.24	zinc finger CCCH domain-containing protein 62-like isoform X3 OS=Cucumis melo OX...	[more]

BLAST of CmoCh20G011650.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022927980.1	2.0e-152	100.00	zinc finger CCCH domain-containing protein 62-like [Cucurbita moschata]	[more]
KAG6571408.1	1.2e-149	98.93	Zinc finger CCCH domain-containing protein 62, partial [Cucurbita argyrosperma s...	[more]
XP_023512636.1	1.4e-142	93.08	zinc finger CCCH domain-containing protein 62 [Cucurbita pepo subsp. pepo]	[more]
XP_022971662.1	7.0e-142	92.01	zinc finger CCCH domain-containing protein 62 isoform X1 [Cucurbita maxima]	[more]
XP_038902878.1	1.8e-118	88.03	zinc finger CCCH domain-containing protein 62-like [Benincasa hispida]	[more]

BLAST of CmoCh20G011650.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G66840.1	7.8e-67	49.47	SAP domain-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003034	SAP domain	PFAM	PF02037	SAP	coord: 63..96 e-value: 4.2E-7 score: 29.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 265..281
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 223..281
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 17..39
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..39
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 245..264
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 225..240
None	No IPR available	PANTHER	PTHR35323	SAP DOMAIN-CONTAINING PROTEIN	coord: 14..272
None	No IPR available	PANTHER	PTHR35323:SF2	SAP DOMAIN-CONTAINING PROTEIN	coord: 14..272

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CmoCh20G011650	CmoCh20G011650	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh20G011650.1:exon:8449	CmoCh20G011650.1:exon:8449	exon
CmoCh20G011650.1:exon:8450	CmoCh20G011650.1:exon:8450	exon
CmoCh20G011650.1:exon:8451	CmoCh20G011650.1:exon:8451	exon
CmoCh20G011650.1:exon:8452	CmoCh20G011650.1:exon:8452	exon
CmoCh20G011650.1:exon:8453	CmoCh20G011650.1:exon:8453	exon
CmoCh20G011650.1:exon:8454	CmoCh20G011650.1:exon:8454	exon
CmoCh20G011650.1:exon:8455	CmoCh20G011650.1:exon:8455	exon
CmoCh20G011650.1:exon:8456	CmoCh20G011650.1:exon:8456	exon

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh20G011650.1:five_prime_utr	CmoCh20G011650.1:five_prime_utr	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh20G011650.1:cds	CmoCh20G011650.1:cds	CDS
CmoCh20G011650.1:cds	CmoCh20G011650.1:cds_2	CDS
CmoCh20G011650.1:cds	CmoCh20G011650.1:cds_3	CDS
CmoCh20G011650.1:cds	CmoCh20G011650.1:cds_4	CDS
CmoCh20G011650.1:cds	CmoCh20G011650.1:cds_5	CDS
CmoCh20G011650.1:cds	CmoCh20G011650.1:cds_6	CDS
CmoCh20G011650.1:cds	CmoCh20G011650.1:cds_7	CDS
CmoCh20G011650.1:cds	CmoCh20G011650.1:cds_8	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh20G011650.1:three_prime_utr	CmoCh20G011650.1:three_prime_utr	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CmoCh20G011650.1	CmoCh20G011650.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0044260	cellular macromolecule metabolic process
biological_process	GO:0006807	nitrogen compound metabolic process
biological_process	GO:0044238	primary metabolic process