Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATCACCATCAAGGAGGCCTGGAATGAAGAAGAGAGAGCATGGAATCCTACCTTTCGCAGAATTCTTCTCCCTCGAAAGATGGAAGACCGGGCACACTTGACAACCAATTGGTCGACTCTTCGAGAAAACAATAGGGACGACTTAACCAGATGGACGCTTAATCCTGAAGGTAAGTTCACTGTTAGTTCATACAAGAATTACATTGCTTCCAATTACTTTCCATTACAGCCCATAAATGTTGGCTCCCTCTGGTCTATCTACCTTCCAAAAAAATGCAAATTGTTCATATGGACCCTGCTTCACAAAGGCCTCAATACGGGTGATAAAAGTCAGTCGTGATGTCCTAAGATGGCTCTATCCCCAAACTGGTGCATTCTATGCAAGATGAATGAGGAAATGGCTGAACACTCCTTCGTACAATGTAGCTTCTCAACTGCTCTTTGGTCTTCCTTTAATGAAGCTACTACTCATCCATTGCCCATAACCTTAGAAGAAATACTTTATGTGATGATTCGGAGCAAGCAAAACACACAAAAAAAAAAAAAAAAAAAAAAAAAAAGTTCTTTGGAGTAATCTTATTGGTGCTTGCCTATGGTGCATATGGTTGAAATGCAATAACTAGATATTCCAAGAGAATCAAACAGCCCAAGTAGAATGTTTGAGAATATCACTTCTCTTGCTGCTAGTTGTTGTAAAAAATCAAAACTTTTTTGTAACTACGATATCTCTTGTGTTGCTCTCAATTGGAAGGCTTTTCTCTAGCCTCCTTCTTGTCTTTCACTTTTTGGACTCGGGTCATGCCCTTGATGTAACTCTCATCCTTTTTATGAATGCATCTTTTGGTTCGGGATATGGTAAGGGCGCTAAAGAGGTGTCAACCTAGTTGAGATGTACCGGTGCGTCCACTGATCCCTATTCTCTAACTTTTATTTCAAAAAAAAAAAAATTATGGATCAAGTGCCTTTGTTCTTAAAAAGATGAGACTAAAAACGTATATTTTGAAACCTAATGACTAAACATACCTATTTTTCAAAACTGGAGAACTAAAAAGACAATTTTTCTTAATAGAAACTAACTAGACTTTGAAACCTCAATATCAAAAGGGTATTTCCACTGAAATAAATTAACGAGTCTCACACAAAAGTTTTGAAATCAATCTCATTTTCATTTTGTATTATTATGTAGACCACAACTATTTATTAATTAATTTACCTTCTTACTTTTTTTTTTTTTTTCTAGCCGTCTATAAAAATGAGACTGATTGCAAAAATTTTATCAATTATTTTACATTTTTTTCCTTTCTCCACTAATAACTTTTCTTCTAATGAAAAAACATCATATTAATCTATCACTTTTTTGTTTTTTTGAAAGAATGTTAATCTATTACTATATATATTGCATACAATCCTTAAATAGAATCAAAACGTTACATTTTAAAAGTTAAAACGTTGTAATCCTTTATTGCATACAATCCTAAAATAGAATTAAAACGTTACATTCCTTTATTGCATACAATCCTTATATAGAATTAAAATTTTACAGTTAATTTGTTAATTATTACATTATCAATTATTAAGATATTAAAATAAAATATTTCAAATTCTTTTTACTTGATGTAAACATATTTTAGTCCATTAAATAAATAATATATCATTATAAGAAATCAAACTTATATTATCAAAATAAGCATAATTCAACTACAGTAAAATTTATACTATCAACTTCGCACATCCTAAAACACAGACAAGATTACATTAACAAGAGTGGTAATTTTCTATTGCCATAAAGAGAAAGTGAACTCCATGTCTCCCACAATATAAGAATCTCCACTAATCACAACTTTCTCACACAAACACAATAGAGCTTCTCTCATTCTCGACCTCCACAATAATTGATTCTTTTACAAATCGAACAATGGCGATCAAGTCACTGAGCGCAGCCACAATGAAGTTAGTACTAATATTCTTGGTCTCCATAGCCGTTTTAGCACGACCGGCGACAGCCCGCACGGTGGCAGTGGCGGTAGAACCCAGTTCATCAATATCACAAAATCTCTCTTTCTTAAGTTGTGCTCCATTTATCCTGGATGCGACATTGTGTATGGTCGATGTGATCAAGTTTCCAATTGCTCCTCATCCTTTTTGTTGCAAAGCCATTTTTAAGCTCAATGACTGTGCTCCTGAAATTTTCGAAAAGATTCCCCCGGTTGACATGGATGTTATTAAGAAGATTTGTGCTTTGTAA
mRNA sequence
ATGATCACCATCAAGGAGGCCTGGAATGAAGAAGAGAGAGCATGGAATCCTACCTTTCGCAGAATTCTTCTCCCTCGAAAGATGGAAGACCGGGCACACTTGACAACCAATTGGTCGACTCTTCGAGAAAACAATAGGGACGACTTAACCAGATGGACGCTTAATCCTGAAGCCGTTTTAGCACGACCGGCGACAGCCCGCACGGTGGCAGTGGCGGTAGAACCCAGTTCATCAATATCACAAAATCTCTCTTTCTTAAGTTGTGCTCCATTTATCCTGGATGCGACATTGTGTATGGTCGATGTGATCAAGTTTCCAATTGCTCCTCATCCTTTTTGTTGCAAAGCCATTTTTAAGCTCAATGACTGTGCTCCTGAAATTTTCGAAAAGATTCCCCCGGTTGACATGGATGTTATTAAGAAGATTTGTGCTTTGTAA
Coding sequence (CDS)
ATGATCACCATCAAGGAGGCCTGGAATGAAGAAGAGAGAGCATGGAATCCTACCTTTCGCAGAATTCTTCTCCCTCGAAAGATGGAAGACCGGGCACACTTGACAACCAATTGGTCGACTCTTCGAGAAAACAATAGGGACGACTTAACCAGATGGACGCTTAATCCTGAAGCCGTTTTAGCACGACCGGCGACAGCCCGCACGGTGGCAGTGGCGGTAGAACCCAGTTCATCAATATCACAAAATCTCTCTTTCTTAAGTTGTGCTCCATTTATCCTGGATGCGACATTGTGTATGGTCGATGTGATCAAGTTTCCAATTGCTCCTCATCCTTTTTGTTGCAAAGCCATTTTTAAGCTCAATGACTGTGCTCCTGAAATTTTCGAAAAGATTCCCCCGGTTGACATGGATGTTATTAAGAAGATTTGTGCTTTGTAA
Protein sequence
MITIKEAWNEEERAWNPTFRRILLPRKMEDRAHLTTNWSTLRENNRDDLTRWTLNPEAVLARPATARTVAVAVEPSSSISQNLSFLSCAPFILDATLCMVDVIKFPIAPHPFCCKAIFKLNDCAPEIFEKIPPVDMDVIKKICAL
Homology
BLAST of CmUC06G120080.1 vs. NCBI nr
Match:
KAE8653023.1 (hypothetical protein Csa_023561, partial [Cucumis sativus])
HSP 1 Score: 129.0 bits (323), Expect = 3.2e-26
Identity = 64/89 (71.91%), Postives = 71/89 (79.78%), Query Frame = 0
Query: 58 AVLARPATA-RTVAVAVEPSSSISQNLSFLSCAPFILDATLCMVDVIKFPIAPHPFCCKA 117
A+LA ATA RTV + SISQ+LSF SC PFILDATLC+VDV KFPIAPHPFCCKA
Sbjct: 19 AILAASATAGRTVVSSTTLDPSISQDLSFFSCTPFILDATLCLVDVFKFPIAPHPFCCKA 78
Query: 118 IFKLNDCAPEIFEKIPPVDMDVIKKICAL 146
IFKLNDCAP +F+ IP DMDV+K ICAL
Sbjct: 79 IFKLNDCAPVVFQTIPSADMDVVKNICAL 107
BLAST of CmUC06G120080.1 vs. NCBI nr
Match:
KAA0050072.1 (hypothetical protein E6C27_scaffold675G00540 [Cucumis melo var. makuwa] >TYK10333.1 hypothetical protein E5676_scaffold367G00060 [Cucumis melo var. makuwa])
HSP 1 Score: 125.6 bits (314), Expect = 3.6e-25
Identity = 59/87 (67.82%), Postives = 66/87 (75.86%), Query Frame = 0
Query: 58 AVLARPATARTVAVAVEPSSSISQNLSFLSCAPFILDATLCMVDVIKFPIAPHPFCCKAI 117
A+LA TA + S+SQNLSF SCAPFI D TLC+VDV KFPI+PHP CCKAI
Sbjct: 22 AILAASVTAGRTVSSTTLDPSMSQNLSFFSCAPFIFDVTLCLVDVFKFPISPHPLCCKAI 81
Query: 118 FKLNDCAPEIFEKIPPVDMDVIKKICA 145
FKLNDCAP +F+ IPP DMDVIKKICA
Sbjct: 82 FKLNDCAPVVFQTIPPADMDVIKKICA 108
BLAST of CmUC06G120080.1 vs. NCBI nr
Match:
KAA0050069.1 (hypothetical protein E6C27_scaffold675G00500 [Cucumis melo var. makuwa] >TYK10341.1 hypothetical protein E5676_scaffold367G00160 [Cucumis melo var. makuwa])
HSP 1 Score: 124.8 bits (312), Expect = 6.1e-25
Identity = 61/88 (69.32%), Postives = 69/88 (78.41%), Query Frame = 0
Query: 58 AVLARPATARTVAVAVEPSSSISQNLSFLSCAPFILDATLCMVDVIKFPIAPHPFCCKAI 117
A+LA P+T A PS S+ QN FL CAPFIL+ATLC+ DVIKFPIAPHP CCKAI
Sbjct: 22 AILA-PSTTMADTTAAAPSPSVPQNFPFLKCAPFILEATLCVTDVIKFPIAPHPSCCKAI 81
Query: 118 FKLNDCAPEIFEKIPPVDMDVIKKICAL 146
KLNDCAPEI++KIP DMDVIKKIC+L
Sbjct: 82 SKLNDCAPEIYQKIPSPDMDVIKKICSL 108
BLAST of CmUC06G120080.1 vs. NCBI nr
Match:
KAE8653020.1 (hypothetical protein Csa_004576, partial [Cucumis sativus] >KGN65427.2 hypothetical protein Csa_004566, partial [Cucumis sativus])
HSP 1 Score: 118.2 bits (295), Expect = 5.7e-23
Identity = 59/82 (71.95%), Postives = 65/82 (79.27%), Query Frame = 0
Query: 58 AVLARPATA-RTVAVAVEPSSSISQNLSFLSCAPFILDATLCMVDVIKFPIAPHPFCCKA 117
A+LA ATA RTV + SISQ+LSF SC PFILDATLC+VDV KFPIAPHPFCCKA
Sbjct: 22 AILAASATAGRTVVSSTTLDPSISQDLSFFSCTPFILDATLCLVDVFKFPIAPHPFCCKA 81
Query: 118 IFKLNDCAPEIFEKIPPVDMDV 139
IFKLNDCAP +F+ IP DMDV
Sbjct: 82 IFKLNDCAPVVFQTIPSADMDV 103
BLAST of CmUC06G120080.1 vs. NCBI nr
Match:
TYK10334.1 (hypothetical protein E5676_scaffold367G00080 [Cucumis melo var. makuwa])
HSP 1 Score: 114.8 bits (286), Expect = 6.3e-22
Identity = 56/88 (63.64%), Postives = 66/88 (75.00%), Query Frame = 0
Query: 58 AVLARPATARTVAVAVEPSSSISQNLSFLSCAPFILDATLCMVDVIKFPIAPHPFCCKAI 117
A+LA P+T A PS S+ QN FL CAPFIL+ATLC+ VIKFPIAPHP CCKAI
Sbjct: 12 AILA-PSTTMAGTTAAAPSPSVPQNFPFLKCAPFILEATLCVTGVIKFPIAPHPSCCKAI 71
Query: 118 FKLNDCAPEIFEKIPPVDMDVIKKICAL 146
KL DCAP+I++KIP DM+VIKK C+L
Sbjct: 72 SKLKDCAPDIYQKIPSSDMNVIKKTCSL 98
BLAST of CmUC06G120080.1 vs. ExPASy TrEMBL
Match:
A0A5A7U2L3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold367G00060 PE=4 SV=1)
HSP 1 Score: 125.6 bits (314), Expect = 1.7e-25
Identity = 59/87 (67.82%), Postives = 66/87 (75.86%), Query Frame = 0
Query: 58 AVLARPATARTVAVAVEPSSSISQNLSFLSCAPFILDATLCMVDVIKFPIAPHPFCCKAI 117
A+LA TA + S+SQNLSF SCAPFI D TLC+VDV KFPI+PHP CCKAI
Sbjct: 22 AILAASVTAGRTVSSTTLDPSMSQNLSFFSCAPFIFDVTLCLVDVFKFPISPHPLCCKAI 81
Query: 118 FKLNDCAPEIFEKIPPVDMDVIKKICA 145
FKLNDCAP +F+ IPP DMDVIKKICA
Sbjct: 82 FKLNDCAPVVFQTIPPADMDVIKKICA 108
BLAST of CmUC06G120080.1 vs. ExPASy TrEMBL
Match:
A0A5A7U9A1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold367G00160 PE=4 SV=1)
HSP 1 Score: 124.8 bits (312), Expect = 3.0e-25
Identity = 61/88 (69.32%), Postives = 69/88 (78.41%), Query Frame = 0
Query: 58 AVLARPATARTVAVAVEPSSSISQNLSFLSCAPFILDATLCMVDVIKFPIAPHPFCCKAI 117
A+LA P+T A PS S+ QN FL CAPFIL+ATLC+ DVIKFPIAPHP CCKAI
Sbjct: 22 AILA-PSTTMADTTAAAPSPSVPQNFPFLKCAPFILEATLCVTDVIKFPIAPHPSCCKAI 81
Query: 118 FKLNDCAPEIFEKIPPVDMDVIKKICAL 146
KLNDCAPEI++KIP DMDVIKKIC+L
Sbjct: 82 SKLNDCAPEIYQKIPSPDMDVIKKICSL 108
BLAST of CmUC06G120080.1 vs. ExPASy TrEMBL
Match:
A0A5D3CGK9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold367G00080 PE=4 SV=1)
HSP 1 Score: 114.8 bits (286), Expect = 3.1e-22
Identity = 56/88 (63.64%), Postives = 66/88 (75.00%), Query Frame = 0
Query: 58 AVLARPATARTVAVAVEPSSSISQNLSFLSCAPFILDATLCMVDVIKFPIAPHPFCCKAI 117
A+LA P+T A PS S+ QN FL CAPFIL+ATLC+ VIKFPIAPHP CCKAI
Sbjct: 12 AILA-PSTTMAGTTAAAPSPSVPQNFPFLKCAPFILEATLCVTGVIKFPIAPHPSCCKAI 71
Query: 118 FKLNDCAPEIFEKIPPVDMDVIKKICAL 146
KL DCAP+I++KIP DM+VIKK C+L
Sbjct: 72 SKLKDCAPDIYQKIPSSDMNVIKKTCSL 98
BLAST of CmUC06G120080.1 vs. ExPASy TrEMBL
Match:
A0A5A7U475 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold675G00490 PE=4 SV=1)
HSP 1 Score: 109.4 bits (272), Expect = 1.3e-20
Identity = 56/88 (63.64%), Postives = 68/88 (77.27%), Query Frame = 0
Query: 58 AVLARPATARTVAVAVEPSSSISQNLSFLSCAPFILDATLCMVDVIKFPIAPHPFCCKAI 117
A+LA ATA TVA A PS ++LSF +C PFILDAT+C+V VIKFP+APHP CCKAI
Sbjct: 23 AILAPSATATTVAAA--PSPLALEDLSFSNCTPFILDATMCVVSVIKFPVAPHPSCCKAI 82
Query: 118 FKLNDCAPEIFEKIPPVDMDVIKKICAL 146
LNDC+PE+++ IP MDVIKKIC+L
Sbjct: 83 SDLNDCSPEVYQHIP--GMDVIKKICSL 106
BLAST of CmUC06G120080.1 vs. ExPASy TrEMBL
Match:
A0A5D3CGL7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold367G00200 PE=4 SV=1)
HSP 1 Score: 105.1 bits (261), Expect = 2.4e-19
Identity = 55/88 (62.50%), Postives = 65/88 (73.86%), Query Frame = 0
Query: 59 VLARPATARTVAVAVEP-SSSISQNLSFLSCAPFILDATLCMVDVIKFPIAPHPFCCKAI 118
+LA TA T+A A P + Q+ SF +CAPFIL+AT+CMVDVIK P+APHP CCKAI
Sbjct: 24 ILAPSVTAHTMAEAPSPLLVLLDQDSSFSNCAPFILEATMCMVDVIKLPVAPHPSCCKAI 83
Query: 119 FKLNDCAPEIFEKIPPVDMDVIKKICAL 146
LNDCAPEI++ IP MDVIKKIC L
Sbjct: 84 SDLNDCAPEIYQHIP--GMDVIKKICGL 109
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| KAE8653023.1 | 3.2e-26 | 71.91 | hypothetical protein Csa_023561, partial [Cucumis sativus] | [more] |
| KAA0050072.1 | 3.6e-25 | 67.82 | hypothetical protein E6C27_scaffold675G00540 [Cucumis melo var. makuwa] >TYK1033... | [more] |
| KAA0050069.1 | 6.1e-25 | 69.32 | hypothetical protein E6C27_scaffold675G00500 [Cucumis melo var. makuwa] >TYK1034... | [more] |
| KAE8653020.1 | 5.7e-23 | 71.95 | hypothetical protein Csa_004576, partial [Cucumis sativus] >KGN65427.2 hypotheti... | [more] |
| TYK10334.1 | 6.3e-22 | 63.64 | hypothetical protein E5676_scaffold367G00080 [Cucumis melo var. makuwa] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A5A7U2L3 | 1.7e-25 | 67.82 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
| A0A5A7U9A1 | 3.0e-25 | 69.32 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
| A0A5D3CGK9 | 3.1e-22 | 63.64 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
| A0A5A7U475 | 1.3e-20 | 63.64 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... | [more] |
| A0A5D3CGL7 | 2.4e-19 | 62.50 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
