CmUC06G120080 (gene) Watermelon (USVL531) v1

Overview


Name	CmUC06G120080
Type	gene
Organism	Citrullus mucosospermus (Watermelon (USVL531) v1)
Description	Unknown protein
Location	CmU531Chr06: 23605250 .. 23607496 (+)
RNA-Seq Expression	CmUC06G120080
Synteny	CmUC06G120080

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATCACCATCAAGGAGGCCTGGAATGAAGAAGAGAGAGCATGGAATCCTACCTTTCGCAGAATTCTTCTCCCTCGAAAGATGGAAGACCGGGCACACTTGACAACCAATTGGTCGACTCTTCGAGAAAACAATAGGGACGACTTAACCAGATGGACGCTTAATCCTGAAGGTAAGTTCACTGTTAGTTCATACAAGAATTACATTGCTTCCAATTACTTTCCATTACAGCCCATAAATGTTGGCTCCCTCTGGTCTATCTACCTTCCAAAAAAATGCAAATTGTTCATATGGACCCTGCTTCACAAAGGCCTCAATACGGGTGATAAAAGTCAGTCGTGATGTCCTAAGATGGCTCTATCCCCAAACTGGTGCATTCTATGCAAGATGAATGAGGAAATGGCTGAACACTCCTTCGTACAATGTAGCTTCTCAACTGCTCTTTGGTCTTCCTTTAATGAAGCTACTACTCATCCATTGCCCATAACCTTAGAAGAAATACTTTATGTGATGATTCGGAGCAAGCAAAACACACAAAAAAAAAAAAAAAAAAAAAAAAAAAGTTCTTTGGAGTAATCTTATTGGTGCTTGCCTATGGTGCATATGGTTGAAATGCAATAACTAGATATTCCAAGAGAATCAAACAGCCCAAGTAGAATGTTTGAGAATATCACTTCTCTTGCTGCTAGTTGTTGTAAAAAATCAAAACTTTTTTGTAACTACGATATCTCTTGTGTTGCTCTCAATTGGAAGGCTTTTCTCTAGCCTCCTTCTTGTCTTTCACTTTTTGGACTCGGGTCATGCCCTTGATGTAACTCTCATCCTTTTTATGAATGCATCTTTTGGTTCGGGATATGGTAAGGGCGCTAAAGAGGTGTCAACCTAGTTGAGATGTACCGGTGCGTCCACTGATCCCTATTCTCTAACTTTTATTTCAAAAAAAAAAAAATTATGGATCAAGTGCCTTTGTTCTTAAAAAGATGAGACTAAAAACGTATATTTTGAAACCTAATGACTAAACATACCTATTTTTCAAAACTGGAGAACTAAAAAGACAATTTTTCTTAATAGAAACTAACTAGACTTTGAAACCTCAATATCAAAAGGGTATTTCCACTGAAATAAATTAACGAGTCTCACACAAAAGTTTTGAAATCAATCTCATTTTCATTTTGTATTATTATGTAGACCACAACTATTTATTAATTAATTTACCTTCTTACTTTTTTTTTTTTTTTCTAGCCGTCTATAAAAATGAGACTGATTGCAAAAATTTTATCAATTATTTTACATTTTTTTCCTTTCTCCACTAATAACTTTTCTTCTAATGAAAAAACATCATATTAATCTATCACTTTTTTGTTTTTTTGAAAGAATGTTAATCTATTACTATATATATTGCATACAATCCTTAAATAGAATCAAAACGTTACATTTTAAAAGTTAAAACGTTGTAATCCTTTATTGCATACAATCCTAAAATAGAATTAAAACGTTACATTCCTTTATTGCATACAATCCTTATATAGAATTAAAATTTTACAGTTAATTTGTTAATTATTACATTATCAATTATTAAGATATTAAAATAAAATATTTCAAATTCTTTTTACTTGATGTAAACATATTTTAGTCCATTAAATAAATAATATATCATTATAAGAAATCAAACTTATATTATCAAAATAAGCATAATTCAACTACAGTAAAATTTATACTATCAACTTCGCACATCCTAAAACACAGACAAGATTACATTAACAAGAGTGGTAATTTTCTATTGCCATAAAGAGAAAGTGAACTCCATGTCTCCCACAATATAAGAATCTCCACTAATCACAACTTTCTCACACAAACACAATAGAGCTTCTCTCATTCTCGACCTCCACAATAATTGATTCTTTTACAAATCGAACAATGGCGATCAAGTCACTGAGCGCAGCCACAATGAAGTTAGTACTAATATTCTTGGTCTCCATAGCCGTTTTAGCACGACCGGCGACAGCCCGCACGGTGGCAGTGGCGGTAGAACCCAGTTCATCAATATCACAAAATCTCTCTTTCTTAAGTTGTGCTCCATTTATCCTGGATGCGACATTGTGTATGGTCGATGTGATCAAGTTTCCAATTGCTCCTCATCCTTTTTGTTGCAAAGCCATTTTTAAGCTCAATGACTGTGCTCCTGAAATTTTCGAAAAGATTCCCCCGGTTGACATGGATGTTATTAAGAAGATTTGTGCTTTGTAA

mRNA sequence

ATGATCACCATCAAGGAGGCCTGGAATGAAGAAGAGAGAGCATGGAATCCTACCTTTCGCAGAATTCTTCTCCCTCGAAAGATGGAAGACCGGGCACACTTGACAACCAATTGGTCGACTCTTCGAGAAAACAATAGGGACGACTTAACCAGATGGACGCTTAATCCTGAAGCCGTTTTAGCACGACCGGCGACAGCCCGCACGGTGGCAGTGGCGGTAGAACCCAGTTCATCAATATCACAAAATCTCTCTTTCTTAAGTTGTGCTCCATTTATCCTGGATGCGACATTGTGTATGGTCGATGTGATCAAGTTTCCAATTGCTCCTCATCCTTTTTGTTGCAAAGCCATTTTTAAGCTCAATGACTGTGCTCCTGAAATTTTCGAAAAGATTCCCCCGGTTGACATGGATGTTATTAAGAAGATTTGTGCTTTGTAA

Coding sequence (CDS)

ATGATCACCATCAAGGAGGCCTGGAATGAAGAAGAGAGAGCATGGAATCCTACCTTTCGCAGAATTCTTCTCCCTCGAAAGATGGAAGACCGGGCACACTTGACAACCAATTGGTCGACTCTTCGAGAAAACAATAGGGACGACTTAACCAGATGGACGCTTAATCCTGAAGCCGTTTTAGCACGACCGGCGACAGCCCGCACGGTGGCAGTGGCGGTAGAACCCAGTTCATCAATATCACAAAATCTCTCTTTCTTAAGTTGTGCTCCATTTATCCTGGATGCGACATTGTGTATGGTCGATGTGATCAAGTTTCCAATTGCTCCTCATCCTTTTTGTTGCAAAGCCATTTTTAAGCTCAATGACTGTGCTCCTGAAATTTTCGAAAAGATTCCCCCGGTTGACATGGATGTTATTAAGAAGATTTGTGCTTTGTAA

Protein sequence

MITIKEAWNEEERAWNPTFRRILLPRKMEDRAHLTTNWSTLRENNRDDLTRWTLNPEAVLARPATARTVAVAVEPSSSISQNLSFLSCAPFILDATLCMVDVIKFPIAPHPFCCKAIFKLNDCAPEIFEKIPPVDMDVIKKICAL

Homology

[Close]

BLAST of CmUC06G120080 vs. NCBI nr
Match: KAE8653023.1 (hypothetical protein Csa_023561, partial [Cucumis sativus])

HSP 1 Score: 129.0 bits (323), Expect = 3.2e-26
Identity = 64/89 (71.91%), Postives = 71/89 (79.78%), Query Frame = 0


Query: 58  AVLARPATA-RTVAVAVEPSSSISQNLSFLSCAPFILDATLCMVDVIKFPIAPHPFCCKA 117
           A+LA  ATA RTV  +     SISQ+LSF SC PFILDATLC+VDV KFPIAPHPFCCKA
Sbjct: 19  AILAASATAGRTVVSSTTLDPSISQDLSFFSCTPFILDATLCLVDVFKFPIAPHPFCCKA 78

Query: 118 IFKLNDCAPEIFEKIPPVDMDVIKKICAL 146
           IFKLNDCAP +F+ IP  DMDV+K ICAL
Sbjct: 79  IFKLNDCAPVVFQTIPSADMDVVKNICAL 107

[Close]

BLAST of CmUC06G120080 vs. NCBI nr
Match: KAA0050072.1 (hypothetical protein E6C27_scaffold675G00540 [Cucumis melo var. makuwa] >TYK10333.1 hypothetical protein E5676_scaffold367G00060 [Cucumis melo var. makuwa])

HSP 1 Score: 125.6 bits (314), Expect = 3.6e-25
Identity = 59/87 (67.82%), Postives = 66/87 (75.86%), Query Frame = 0


Query: 58  AVLARPATARTVAVAVEPSSSISQNLSFLSCAPFILDATLCMVDVIKFPIAPHPFCCKAI 117
           A+LA   TA     +     S+SQNLSF SCAPFI D TLC+VDV KFPI+PHP CCKAI
Sbjct: 22  AILAASVTAGRTVSSTTLDPSMSQNLSFFSCAPFIFDVTLCLVDVFKFPISPHPLCCKAI 81

Query: 118 FKLNDCAPEIFEKIPPVDMDVIKKICA 145
           FKLNDCAP +F+ IPP DMDVIKKICA
Sbjct: 82  FKLNDCAPVVFQTIPPADMDVIKKICA 108

[Close]

BLAST of CmUC06G120080 vs. NCBI nr
Match: KAA0050069.1 (hypothetical protein E6C27_scaffold675G00500 [Cucumis melo var. makuwa] >TYK10341.1 hypothetical protein E5676_scaffold367G00160 [Cucumis melo var. makuwa])

HSP 1 Score: 124.8 bits (312), Expect = 6.1e-25
Identity = 61/88 (69.32%), Postives = 69/88 (78.41%), Query Frame = 0


Query: 58  AVLARPATARTVAVAVEPSSSISQNLSFLSCAPFILDATLCMVDVIKFPIAPHPFCCKAI 117
           A+LA P+T      A  PS S+ QN  FL CAPFIL+ATLC+ DVIKFPIAPHP CCKAI
Sbjct: 22  AILA-PSTTMADTTAAAPSPSVPQNFPFLKCAPFILEATLCVTDVIKFPIAPHPSCCKAI 81

Query: 118 FKLNDCAPEIFEKIPPVDMDVIKKICAL 146
            KLNDCAPEI++KIP  DMDVIKKIC+L
Sbjct: 82  SKLNDCAPEIYQKIPSPDMDVIKKICSL 108

[Close]

BLAST of CmUC06G120080 vs. NCBI nr
Match: KAE8653020.1 (hypothetical protein Csa_004576, partial [Cucumis sativus] >KGN65427.2 hypothetical protein Csa_004566, partial [Cucumis sativus])

HSP 1 Score: 118.2 bits (295), Expect = 5.7e-23
Identity = 59/82 (71.95%), Postives = 65/82 (79.27%), Query Frame = 0


Query: 58  AVLARPATA-RTVAVAVEPSSSISQNLSFLSCAPFILDATLCMVDVIKFPIAPHPFCCKA 117
           A+LA  ATA RTV  +     SISQ+LSF SC PFILDATLC+VDV KFPIAPHPFCCKA
Sbjct: 22  AILAASATAGRTVVSSTTLDPSISQDLSFFSCTPFILDATLCLVDVFKFPIAPHPFCCKA 81

Query: 118 IFKLNDCAPEIFEKIPPVDMDV 139
           IFKLNDCAP +F+ IP  DMDV
Sbjct: 82  IFKLNDCAPVVFQTIPSADMDV 103

[Close]

BLAST of CmUC06G120080 vs. NCBI nr
Match: TYK10334.1 (hypothetical protein E5676_scaffold367G00080 [Cucumis melo var. makuwa])

HSP 1 Score: 114.8 bits (286), Expect = 6.3e-22
Identity = 56/88 (63.64%), Postives = 66/88 (75.00%), Query Frame = 0


Query: 58  AVLARPATARTVAVAVEPSSSISQNLSFLSCAPFILDATLCMVDVIKFPIAPHPFCCKAI 117
           A+LA P+T      A  PS S+ QN  FL CAPFIL+ATLC+  VIKFPIAPHP CCKAI
Sbjct: 12  AILA-PSTTMAGTTAAAPSPSVPQNFPFLKCAPFILEATLCVTGVIKFPIAPHPSCCKAI 71

Query: 118 FKLNDCAPEIFEKIPPVDMDVIKKICAL 146
            KL DCAP+I++KIP  DM+VIKK C+L
Sbjct: 72  SKLKDCAPDIYQKIPSSDMNVIKKTCSL 98

[Close]

BLAST of CmUC06G120080 vs. ExPASy TrEMBL
Match: A0A5A7U2L3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold367G00060 PE=4 SV=1)

HSP 1 Score: 125.6 bits (314), Expect = 1.7e-25
Identity = 59/87 (67.82%), Postives = 66/87 (75.86%), Query Frame = 0


Query: 58  AVLARPATARTVAVAVEPSSSISQNLSFLSCAPFILDATLCMVDVIKFPIAPHPFCCKAI 117
           A+LA   TA     +     S+SQNLSF SCAPFI D TLC+VDV KFPI+PHP CCKAI
Sbjct: 22  AILAASVTAGRTVSSTTLDPSMSQNLSFFSCAPFIFDVTLCLVDVFKFPISPHPLCCKAI 81

Query: 118 FKLNDCAPEIFEKIPPVDMDVIKKICA 145
           FKLNDCAP +F+ IPP DMDVIKKICA
Sbjct: 82  FKLNDCAPVVFQTIPPADMDVIKKICA 108

[Close]

BLAST of CmUC06G120080 vs. ExPASy TrEMBL
Match: A0A5A7U9A1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold367G00160 PE=4 SV=1)

HSP 1 Score: 124.8 bits (312), Expect = 3.0e-25
Identity = 61/88 (69.32%), Postives = 69/88 (78.41%), Query Frame = 0


Query: 58  AVLARPATARTVAVAVEPSSSISQNLSFLSCAPFILDATLCMVDVIKFPIAPHPFCCKAI 117
           A+LA P+T      A  PS S+ QN  FL CAPFIL+ATLC+ DVIKFPIAPHP CCKAI
Sbjct: 22  AILA-PSTTMADTTAAAPSPSVPQNFPFLKCAPFILEATLCVTDVIKFPIAPHPSCCKAI 81

Query: 118 FKLNDCAPEIFEKIPPVDMDVIKKICAL 146
            KLNDCAPEI++KIP  DMDVIKKIC+L
Sbjct: 82  SKLNDCAPEIYQKIPSPDMDVIKKICSL 108

[Close]

BLAST of CmUC06G120080 vs. ExPASy TrEMBL
Match: A0A5D3CGK9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold367G00080 PE=4 SV=1)

HSP 1 Score: 114.8 bits (286), Expect = 3.1e-22
Identity = 56/88 (63.64%), Postives = 66/88 (75.00%), Query Frame = 0


Query: 58  AVLARPATARTVAVAVEPSSSISQNLSFLSCAPFILDATLCMVDVIKFPIAPHPFCCKAI 117
           A+LA P+T      A  PS S+ QN  FL CAPFIL+ATLC+  VIKFPIAPHP CCKAI
Sbjct: 12  AILA-PSTTMAGTTAAAPSPSVPQNFPFLKCAPFILEATLCVTGVIKFPIAPHPSCCKAI 71

Query: 118 FKLNDCAPEIFEKIPPVDMDVIKKICAL 146
            KL DCAP+I++KIP  DM+VIKK C+L
Sbjct: 72  SKLKDCAPDIYQKIPSSDMNVIKKTCSL 98

[Close]

BLAST of CmUC06G120080 vs. ExPASy TrEMBL
Match: A0A5A7U475 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold675G00490 PE=4 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 1.3e-20
Identity = 56/88 (63.64%), Postives = 68/88 (77.27%), Query Frame = 0


Query: 58  AVLARPATARTVAVAVEPSSSISQNLSFLSCAPFILDATLCMVDVIKFPIAPHPFCCKAI 117
           A+LA  ATA TVA A  PS    ++LSF +C PFILDAT+C+V VIKFP+APHP CCKAI
Sbjct: 23  AILAPSATATTVAAA--PSPLALEDLSFSNCTPFILDATMCVVSVIKFPVAPHPSCCKAI 82

Query: 118 FKLNDCAPEIFEKIPPVDMDVIKKICAL 146
             LNDC+PE+++ IP   MDVIKKIC+L
Sbjct: 83  SDLNDCSPEVYQHIP--GMDVIKKICSL 106

[Close]

BLAST of CmUC06G120080 vs. ExPASy TrEMBL
Match: A0A5D3CGL7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold367G00200 PE=4 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 2.4e-19
Identity = 55/88 (62.50%), Postives = 65/88 (73.86%), Query Frame = 0


Query: 59  VLARPATARTVAVAVEP-SSSISQNLSFLSCAPFILDATLCMVDVIKFPIAPHPFCCKAI 118
           +LA   TA T+A A  P    + Q+ SF +CAPFIL+AT+CMVDVIK P+APHP CCKAI
Sbjct: 24  ILAPSVTAHTMAEAPSPLLVLLDQDSSFSNCAPFILEATMCMVDVIKLPVAPHPSCCKAI 83

Query: 119 FKLNDCAPEIFEKIPPVDMDVIKKICAL 146
             LNDCAPEI++ IP   MDVIKKIC L
Sbjct: 84  SDLNDCAPEIYQHIP--GMDVIKKICGL 109

The following BLAST results are available for this feature:

BLAST of CmUC06G120080 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8653023.1	3.2e-26	71.91	hypothetical protein Csa_023561, partial [Cucumis sativus]	[more]
KAA0050072.1	3.6e-25	67.82	hypothetical protein E6C27_scaffold675G00540 [Cucumis melo var. makuwa] >TYK1033...	[more]
KAA0050069.1	6.1e-25	69.32	hypothetical protein E6C27_scaffold675G00500 [Cucumis melo var. makuwa] >TYK1034...	[more]
KAE8653020.1	5.7e-23	71.95	hypothetical protein Csa_004576, partial [Cucumis sativus] >KGN65427.2 hypotheti...	[more]
TYK10334.1	6.3e-22	63.64	hypothetical protein E5676_scaffold367G00080 [Cucumis melo var. makuwa]	[more]

BLAST of CmUC06G120080 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CmUC06G120080 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7U2L3	1.7e-25	67.82	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7U9A1	3.0e-25	69.32	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5D3CGK9	3.1e-22	63.64	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7U475	1.3e-20	63.64	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5D3CGL7	2.4e-19	62.50	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]

BLAST of CmUC06G120080 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmUC06G120080.1	CmUC06G120080.1	mRNA