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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. ATGCTTGTCGTTGATAATGGGGACGGGAAGAGAGCTTTAACCGGCATACGGAATTCTCACGCCGTGTTTTCAACGCACAAATTGGAAATTCCGACTAATTTCACCCAAACAGCCTCCGATTCTTCAACCCCATTTTGCTGCCGCCGCCGTGGACTTTGGATTAGGGGCCATCTTCTCCGCCGTCCCGCCCCAACTCTTTCCCTATCGCCGTACTCTTCTCCGGCCGCCGTTGCAGAACCTAACTCCTCTTCCGCCGCTTCAACTTCCTCCCTATTAACTCCACAGTTTGTGAAGATCTAGACTCGAATTTTCGCTTTTCATGCTCTTATTGACTCCTGGTTATTAGGGTTTTCTTTCGCCTGGGCCGCTCTTTTCTCACTTCCATTGGCGTACTTGTGCTGAAATTTGAGGTTTCCTTATTTCATTTCTGTATCTTTTGTTGGCATTTGAGGTTCTTCTGCTTTTTCCTTCTTTTCCCATTCATTGGATTCTTCTGCTTAACATCGTAAATAACGATTCTCTCTGTTGTTTTGTAATTTGCTTCCTTCTCAACTTTTACCTAGTCCTTTTGGGACATGCAATACGGATAAATCAGAAAAGAAAAAGATAACGTGCTTCCCTGGCTATATATTGATTCGGGAAAATGTGATTTCATGAATTGCTATATGCAATATTTGTATAGTTGGTCGGTGGGGAATGTATGTGAAATAAGCTTTGTTATTGATCTTTGTCACTCGTATTCATCGGTCTACTACATTAGTACTGGAAATGAGGTTTTTCCCTAAATATGGATTATGGACATTATCATCGATCAGTTTGTGTTATTTTCGTATTAGTTGACTCTTTATTTGATTTTCTATACTATTTTTTGCTGTTGGATGACTCTACTTCATTGAGAATGCTCTTCGCCACAGCTGCACTCTGCAAAATGGGTACTCCTGTCTGTGGTTCTGTGTGGTTCATGGTATAATGCATGCTAAACGATCAAAGGATGTGTAATTTTTTCTCACAAGAAGAAATACAACAAGTGTAGGTCAATTACACAATTGGTCATAAAATCTAAAGAAGTACAAATATAGAATATAGTTGTAGTCATGCAATATAAAAGCACACACCAACTTTAACCTTGACCGGCAGAAATTAAAAGGGAAAAGGGTGTGACCGTTAGGTGCACCTTTGTGAAACCTCATCATCAAAATGTGCAAGTTTTGCCTCTAACAACACTGGTTATGAATGTTTACACAATTGTTTTCCCTGTATTAGAAAGTTTTTCTGTCTGCTGA mRNA sequence ATGCTTGTCGTTGATAATGGGGACGGGAAGAGAGCTTTAACCGGCATACGGAATTCTCACGCCGTGTTTTCAACGCACAAATTGGAAATTCCGACTAATTTCACCCAAACAGCCTCCGATTCTTCAACCCCATTTTGCTGCCGCCGCCGTGGACTTTGGATTAGGGGCCATCTTCTCCGCCGTCCCGCCCCAACTCTTTCCCTATCGCCGTACTCTTCTCCGGCCGCCGTTGCAGAACCTAACTCCTCTTCCGCCGCTTCAACTTCCTCCCTATTAACTCCACAGGTTTTCTTTCGCCTGGGCCGCTCTTTTCTCACTTCCATTGGCGTACTTGTGCTGAAATTTGAGGTTTCCTTATTTCATTTCTGTATCTTTTGTTGGCATTTGAGTTGGTCGGTGGGGAATGTATGTGAAATAAGCTTTGTTATTGATCTTTGTCACTCGTATTCATCGGTCTACTACATTAGTACTGGAAATGAGAATGCTCTTCGCCACAGCTGCACTCTGCAAAATGGGTACTCCTGTCTGTGGTTCTGTGTGGTTCATGAAATTAAAAGGGAAAAGGGTGTGACCGTTAGGTGCACCTTTGTGAAACCTCATCATCAAAATGTGCAAGTTTTGCCTCTAACAACACTGGTTATGAATGTTTACACAATTGTTTTCCCTGTATTAGAAAGTTTTTCTGTCTGCTGA Coding sequence (CDS) ATGCTTGTCGTTGATAATGGGGACGGGAAGAGAGCTTTAACCGGCATACGGAATTCTCACGCCGTGTTTTCAACGCACAAATTGGAAATTCCGACTAATTTCACCCAAACAGCCTCCGATTCTTCAACCCCATTTTGCTGCCGCCGCCGTGGACTTTGGATTAGGGGCCATCTTCTCCGCCGTCCCGCCCCAACTCTTTCCCTATCGCCGTACTCTTCTCCGGCCGCCGTTGCAGAACCTAACTCCTCTTCCGCCGCTTCAACTTCCTCCCTATTAACTCCACAGGTTTTCTTTCGCCTGGGCCGCTCTTTTCTCACTTCCATTGGCGTACTTGTGCTGAAATTTGAGGTTTCCTTATTTCATTTCTGTATCTTTTGTTGGCATTTGAGTTGGTCGGTGGGGAATGTATGTGAAATAAGCTTTGTTATTGATCTTTGTCACTCGTATTCATCGGTCTACTACATTAGTACTGGAAATGAGAATGCTCTTCGCCACAGCTGCACTCTGCAAAATGGGTACTCCTGTCTGTGGTTCTGTGTGGTTCATGAAATTAAAAGGGAAAAGGGTGTGACCGTTAGGTGCACCTTTGTGAAACCTCATCATCAAAATGTGCAAGTTTTGCCTCTAACAACACTGGTTATGAATGTTTACACAATTGTTTTCCCTGTATTAGAAAGTTTTTCTGTCTGCTGA Protein sequence MLVVDNGDGKRALTGIRNSHAVFSTHKLEIPTNFTQTASDSSTPFCCRRRGLWIRGHLLRRPAPTLSLSPYSSPAAVAEPNSSSAASTSSLLTPQVFFRLGRSFLTSIGVLVLKFEVSLFHFCIFCWHLSWSVGNVCEISFVIDLCHSYSSVYYISTGNENALRHSCTLQNGYSCLWFCVVHEIKREKGVTVRCTFVKPHHQNVQVLPLTTLVMNVYTIVFPVLESFSVC
Homology
BLAST of CmUC06G112390.1 vs. NCBI nr
Match: KAE8637117.1 (hypothetical protein CSA_004594 [Cucumis sativus] >KAE8647145.1 hypothetical protein Csa_021772 [Cucumis sativus]) HSP 1 Score: 84.7 bits (208), Expect = 1.1e-12 Identity = 58/121 (47.93%), Postives = 69/121 (57.02%), Query Frame = 0
Query: 3 VVDNGDGKRALTGIRNSHAVFSTHKLEIPTNFTQTASDSSTPFCCRRRGLWIRGHLLRRP 62
VVDNGDG+ ALTGIR+SH VFSTH+L+ F +STP R WI+ HL P
Sbjct: 22 VVDNGDGEIALTGIRDSHPVFSTHRLK----FRLPQIITSTPQRRRLLRHWIQVHLPALP 81
Query: 63 APTLSLSPYSSPAAVAEPNSSSAASTSSLLTPQVFFRLGRSFLTSIGVLVLKFEVSLFHF 122
PTLSLSPYSS +VFFRL +FLTSIGVL+LK E ++
Sbjct: 82 -PTLSLSPYSS--------------------SRVFFRLASTFLTSIGVLLLKLEATILLG 117
Query: 123 C 124
C
Sbjct: 142 C 117
BLAST of CmUC06G112390.1 vs. ExPASy TrEMBL
Match: A0A0A0KI41 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G324850 PE=4 SV=1) HSP 1 Score: 72.4 bits (176), Expect = 2.8e-09 Identity = 51/103 (49.51%), Postives = 59/103 (57.28%), Query Frame = 0
Query: 3 VVDNGDGKRALTGIRNSHAVFSTHKLEI----------PTNFTQTASDSSTPFCCRRRGL 62
VVDNGDG+ ALTGIR+SH VFSTH+L+ PT + + DSS P
Sbjct: 22 VVDNGDGEIALTGIRDSHPVFSTHRLKFRLPQIITSTPPTPPSSSTLDSSPP-------- 81
Query: 63 WIRGHLLRRPAPTLSLSPY-SSPAAVAEPNSSSAASTSSLLTP 95
PTLSLSPY SSP VA+PNSSS A+TS L TP
Sbjct: 82 ------SPPSPPTLSLSPYSSSPVLVAQPNSSSPATTSFLSTP 110
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| KAE8637117.1 | 1.1e-12 | 47.93 | hypothetical protein CSA_004594 [Cucumis sativus] >KAE8647145.1 hypothetical pro... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A0A0KI41 | 2.8e-09 | 49.51 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G324850 PE=4 SV=1 | [more] |
| Match Name | E-value | Identity | Description | |
|---|
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Type |
|---|
| CmUC06G112390.1-exon | CmUC06G112390.1-exon-CmU531Chr06:4813646..4813929 | exon |
| CmUC06G112390.1-exon | CmUC06G112390.1-exon-CmU531Chr06:4813992..4814096 | exon |
| CmUC06G112390.1-exon | CmUC06G112390.1-exon-CmU531Chr06:4814328..4814418 | exon |
| CmUC06G112390.1-exon | CmUC06G112390.1-exon-CmU531Chr06:4814543..4814609 | exon |
| CmUC06G112390.1-exon | CmUC06G112390.1-exon-CmU531Chr06:4814783..4814928 | exon |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Type |
|---|
| CmUC06G112390.1-cds | CmUC06G112390.1-cds-CmU531Chr06:4813646..4813929 | CDS |
| CmUC06G112390.1-cds | CmUC06G112390.1-cds-CmU531Chr06:4813992..4814096 | CDS |
| CmUC06G112390.1-cds | CmUC06G112390.1-cds-CmU531Chr06:4814328..4814418 | CDS |
| CmUC06G112390.1-cds | CmUC06G112390.1-cds-CmU531Chr06:4814543..4814609 | CDS |
| CmUC06G112390.1-cds | CmUC06G112390.1-cds-CmU531Chr06:4814783..4814928 | CDS |
The following polypeptide feature(s) derives from this mRNA:
| Feature Name | Unique Name | Type |
|---|
| CmUC06G112390.1 | CmUC06G112390.1-protein | polypeptide |
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