Homology
BLAST of Cla97C01G000080.2 vs. NCBI nr
Match:
XP_022138164.1 (60S acidic ribosomal protein P1-like isoform X2 [Momordica charantia])
HSP 1 Score: 92.8 bits (229), Expect = 1.6e-15
Identity = 58/109 (53.21%), Postives = 69/109 (63.30%), Query Frame = 0
Query: 12 MSTSELACTYAALILHGDAISVAAEKISKSVNAASLTVESYWPSLFS------------L 71
MSTSELACTYAALILH DAISV AEKI+ V AA LTVESYWPSLF+ L
Sbjct: 1 MSTSELACTYAALILHDDAISVTAEKIATLVKAAGLTVESYWPSLFAKLSSKRNIDDLIL 60
Query: 72 SISSSAGNA------------------APAPVDKQEEVMEESEDEMVLG 91
++ S+A +A APAPV+K+EE +EESED++V G
Sbjct: 61 NVGSAAASAPLSMASSSSADASAAPAPAPAPVEKKEEAVEESEDDLVFG 109
BLAST of Cla97C01G000080.2 vs. NCBI nr
Match:
XP_022138163.1 (60S acidic ribosomal protein P1-like isoform X1 [Momordica charantia])
HSP 1 Score: 86.3 bits (212), Expect = 1.5e-13
Identity = 54/105 (51.43%), Postives = 65/105 (61.90%), Query Frame = 0
Query: 16 ELACTYAALILHGDAISVAAEKISKSVNAASLTVESYWPSLFS------------LSISS 75
ELACTYAALILH DAISV AEKI+ V AA LTVESYWPSLF+ L++ S
Sbjct: 33 ELACTYAALILHDDAISVTAEKIATLVKAAGLTVESYWPSLFAKLSSKRNIDDLILNVGS 92
Query: 76 SAGNA------------------APAPVDKQEEVMEESEDEMVLG 91
+A +A APAPV+K+EE +EESED++V G
Sbjct: 93 AAASAPLSMASSSSADASAAPAPAPAPVEKKEEAVEESEDDLVFG 137
BLAST of Cla97C01G000080.2 vs. NCBI nr
Match:
XP_006394706.1 (60S acidic ribosomal protein P1 [Eutrema salsugineum] >ESQ31992.1 hypothetical protein EUTSA_v10005602mg [Eutrema salsugineum])
HSP 1 Score: 81.6 bits (200), Expect = 3.8e-12
Identity = 51/109 (46.79%), Postives = 64/109 (58.72%), Query Frame = 0
Query: 11 AMSTSELACTYAALILHGDAISVAAEKISKSVNAASLTVESYWPSLFS------------ 70
A +TSELACTYAALILH D I + AEKISK V AA++ VESYWPSLF+
Sbjct: 2 ATTTSELACTYAALILHDDGIEITAEKISKLVKAANVNVESYWPSLFAKLCQKKNIDDLI 61
Query: 71 LSISSSAGNAAPAPVD-----------------KQEEVMEESEDEMVLG 91
+++ +S G AAP + K+E+V EESED+MV G
Sbjct: 62 MNVGASGGAAAPVATNDVPAATQAVPAAEDIKKKKEDVKEESEDDMVFG 110
BLAST of Cla97C01G000080.2 vs. NCBI nr
Match:
XP_009111636.1 (60S acidic ribosomal protein P1 isoform X2 [Brassica rapa])
HSP 1 Score: 79.7 bits (195), Expect = 1.4e-11
Identity = 49/106 (46.23%), Postives = 63/106 (59.43%), Query Frame = 0
Query: 13 STSELACTYAALILHGDAISVAAEKISKSVNAASLTVESYWPSLFS------------LS 72
+TSELACTYAALILH D I + AEKI+K V AA++ VESYWPSLF+ ++
Sbjct: 3 NTSELACTYAALILHDDGIEITAEKIAKLVKAANVNVESYWPSLFAKLCQKKNIDDLIMN 62
Query: 73 ISSSAGNAAPAPVD----------------KQEEVMEESEDEMVLG 91
+ +S AAP ++ K+EEV EESED+MV G
Sbjct: 63 VGASGDAAAPVAINVPAAAQAVPSAEETKKKKEEVKEESEDDMVFG 108
BLAST of Cla97C01G000080.2 vs. NCBI nr
Match:
XP_013659163.1 (60S acidic ribosomal protein P1 isoform X2 [Brassica napus])
HSP 1 Score: 78.6 bits (192), Expect = 3.2e-11
Identity = 49/106 (46.23%), Postives = 62/106 (58.49%), Query Frame = 0
Query: 13 STSELACTYAALILHGDAISVAAEKISKSVNAASLTVESYWPSLFS------------LS 72
+TSELACTYAALILH D I + AEKI+K V AA++ VESYWPSLF+ ++
Sbjct: 3 NTSELACTYAALILHDDGIEITAEKIAKLVKAANVNVESYWPSLFAKLCQKKNIDDLIMN 62
Query: 73 ISSSAGNAAPAPVD----------------KQEEVMEESEDEMVLG 91
+ +S AAP + K+EEV EESED+MV G
Sbjct: 63 VGASGDAAAPVATNVPAAAQAVPSAEETKKKKEEVKEESEDDMVFG 108
BLAST of Cla97C01G000080.2 vs. ExPASy Swiss-Prot
Match:
P52855 (60S acidic ribosomal protein P1 OS=Zea mays OX=4577 GN=RPP1A PE=1 SV=1)
HSP 1 Score: 66.6 bits (161), Expect = 1.6e-10
Identity = 44/103 (42.72%), Postives = 58/103 (56.31%), Query Frame = 0
Query: 12 MSTSELACTYAALILHGDAISVAAEKISKSVNAASLTVESYWPSLFS------------L 71
M++ ELAC YAALIL D I++ AEKI+ V AA++ VESYWP+LF+ L
Sbjct: 1 MASGELACRYAALILSDDGIAITAEKIATIVKAANIKVESYWPALFAKLLEKRNVEDLIL 60
Query: 72 SISSSAG---------------NAAPAPVDKQEEVMEESEDEM 88
S+ S G AAPA +K+EE EES+D+M
Sbjct: 61 SVGSGGGAAPVAAAAPAGGAAAAAAPAVEEKKEEAKEESDDDM 103
BLAST of Cla97C01G000080.2 vs. ExPASy Swiss-Prot
Match:
P27464 (60S acidic ribosomal protein P1 OS=Polyorchis penicillatus OX=6091 PE=3 SV=1)
HSP 1 Score: 64.3 bits (155), Expect = 8.2e-10
Identity = 44/92 (47.83%), Postives = 57/92 (61.96%), Query Frame = 0
Query: 13 STSELACTYAALILHGDAISVAAEKISKSVNAASLTVESYWPSLFSLSISS--------- 72
STSELAC Y+ALILH DAI+ AEK++K ++AA++ VE YWP LF+L +
Sbjct: 5 STSELACVYSALILHDDAIT--AEKMNKIISAANVNVEPYWPGLFALEGKNIGDLICNVG 64
Query: 73 SAGNAAPAPV---------DKQEEVMEESEDE 87
S+G AA AP +K+EE ESEDE
Sbjct: 65 SSGPAAGAPAAGAAGGAVEEKKEEKKAESEDE 94
BLAST of Cla97C01G000080.2 vs. ExPASy Swiss-Prot
Match:
P29763 (60S acidic ribosomal protein P1 OS=Chlamydomonas reinhardtii OX=3055 PE=3 SV=1)
HSP 1 Score: 59.7 bits (143), Expect = 2.0e-08
Identity = 40/99 (40.40%), Postives = 52/99 (52.53%), Query Frame = 0
Query: 12 MSTSELACTYAALILHGDAISVAAEKISKSVNAASLTVESYWPSLFS-----------LS 71
MSTSELACTYAALILH D + + A+ I+ AA + VE YWP+LF+ ++
Sbjct: 1 MSTSELACTYAALILHDDGLEITADNINTICKAAGVEVEGYWPALFAKLFAKKSMDDLIT 60
Query: 72 ISSSAGNAAPA-------------PVDKQEEVMEESEDE 87
+ G AAPA K+EE E SE+E
Sbjct: 61 NVGAGGGAAPAAAAPAAGGAPAAGAAPKKEEKKEPSEEE 99
BLAST of Cla97C01G000080.2 vs. ExPASy Swiss-Prot
Match:
P18660 (60S acidic ribosomal protein P1 OS=Gallus gallus OX=9031 GN=RPLP1 PE=3 SV=1)
HSP 1 Score: 57.8 bits (138), Expect = 7.7e-08
Identity = 36/101 (35.64%), Postives = 52/101 (51.49%), Query Frame = 0
Query: 13 STSELACTYAALILHGDAISVAAEKISKSVNAASLTVESYWPSLFSLSISS--------- 72
S SELAC Y+ALILH D ++V +KI+ + AA + VE +WP LF+ ++++
Sbjct: 3 SVSELACIYSALILHDDEVTVTEDKINALIKAAGVNVEPFWPGLFAKALANIDIGSLICN 62
Query: 73 -------------------SAGNAAPAPVDKQEEVMEESED 86
+ G AAPA K+EE EESE+
Sbjct: 63 VGAGGGAPAAAAPAGGAAPAGGGAAPAEEKKEEEKKEESEE 103
BLAST of Cla97C01G000080.2 vs. ExPASy Swiss-Prot
Match:
P47955 (60S acidic ribosomal protein P1 OS=Mus musculus OX=10090 GN=Rplp1 PE=1 SV=1)
HSP 1 Score: 57.4 bits (137), Expect = 1.0e-07
Identity = 38/109 (34.86%), Postives = 57/109 (52.29%), Query Frame = 0
Query: 13 STSELACTYAALILHGDAISVAAEKISKSVNAASLTVESYWPSLFSLSI----------- 72
S SELAC Y+ALILH D ++V +KI+ + AA ++VE +WP LF+ ++
Sbjct: 3 SVSELACIYSALILHDDEVTVTEDKINALIKAAGVSVEPFWPGLFAKALANVNIGSLICN 62
Query: 73 -----------SSSAGNAAPA---------PVDKQEEVMEESEDEMVLG 91
++ AG AAP+ V+ ++E EESED+M G
Sbjct: 63 VGAGGPAPAAGAAPAGGAAPSTAAAPAEEKKVEAKKEESEESEDDMGFG 111
BLAST of Cla97C01G000080.2 vs. ExPASy TrEMBL
Match:
A0A6J1C9A3 (60S acidic ribosomal protein P1-like isoform X2 OS=Momordica charantia OX=3673 GN=LOC111009401 PE=3 SV=1)
HSP 1 Score: 92.8 bits (229), Expect = 7.9e-16
Identity = 58/109 (53.21%), Postives = 69/109 (63.30%), Query Frame = 0
Query: 12 MSTSELACTYAALILHGDAISVAAEKISKSVNAASLTVESYWPSLFS------------L 71
MSTSELACTYAALILH DAISV AEKI+ V AA LTVESYWPSLF+ L
Sbjct: 1 MSTSELACTYAALILHDDAISVTAEKIATLVKAAGLTVESYWPSLFAKLSSKRNIDDLIL 60
Query: 72 SISSSAGNA------------------APAPVDKQEEVMEESEDEMVLG 91
++ S+A +A APAPV+K+EE +EESED++V G
Sbjct: 61 NVGSAAASAPLSMASSSSADASAAPAPAPAPVEKKEEAVEESEDDLVFG 109
BLAST of Cla97C01G000080.2 vs. ExPASy TrEMBL
Match:
A0A6J1CC92 (60S acidic ribosomal protein P1-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111009401 PE=3 SV=1)
HSP 1 Score: 86.3 bits (212), Expect = 7.4e-14
Identity = 54/105 (51.43%), Postives = 65/105 (61.90%), Query Frame = 0
Query: 16 ELACTYAALILHGDAISVAAEKISKSVNAASLTVESYWPSLFS------------LSISS 75
ELACTYAALILH DAISV AEKI+ V AA LTVESYWPSLF+ L++ S
Sbjct: 33 ELACTYAALILHDDAISVTAEKIATLVKAAGLTVESYWPSLFAKLSSKRNIDDLILNVGS 92
Query: 76 SAGNA------------------APAPVDKQEEVMEESEDEMVLG 91
+A +A APAPV+K+EE +EESED++V G
Sbjct: 93 AAASAPLSMASSSSADASAAPAPAPAPVEKKEEAVEESEDDLVFG 137
BLAST of Cla97C01G000080.2 vs. ExPASy TrEMBL
Match:
V4KQ04 (Uncharacterized protein OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10005602mg PE=3 SV=1)
HSP 1 Score: 81.6 bits (200), Expect = 1.8e-12
Identity = 51/109 (46.79%), Postives = 64/109 (58.72%), Query Frame = 0
Query: 11 AMSTSELACTYAALILHGDAISVAAEKISKSVNAASLTVESYWPSLFS------------ 70
A +TSELACTYAALILH D I + AEKISK V AA++ VESYWPSLF+
Sbjct: 2 ATTTSELACTYAALILHDDGIEITAEKISKLVKAANVNVESYWPSLFAKLCQKKNIDDLI 61
Query: 71 LSISSSAGNAAPAPVD-----------------KQEEVMEESEDEMVLG 91
+++ +S G AAP + K+E+V EESED+MV G
Sbjct: 62 MNVGASGGAAAPVATNDVPAATQAVPAAEDIKKKKEDVKEESEDDMVFG 110
BLAST of Cla97C01G000080.2 vs. ExPASy TrEMBL
Match:
M4F610 (Uncharacterized protein OS=Brassica rapa subsp. pekinensis OX=51351 PE=3 SV=1)
HSP 1 Score: 79.7 bits (195), Expect = 6.9e-12
Identity = 49/106 (46.23%), Postives = 63/106 (59.43%), Query Frame = 0
Query: 13 STSELACTYAALILHGDAISVAAEKISKSVNAASLTVESYWPSLFS------------LS 72
+TSELACTYAALILH D I + AEKI+K V AA++ VESYWPSLF+ ++
Sbjct: 3 NTSELACTYAALILHDDGIEITAEKIAKLVKAANVNVESYWPSLFAKLCQKKNIDDLIMN 62
Query: 73 ISSSAGNAAPAPVD----------------KQEEVMEESEDEMVLG 91
+ +S AAP ++ K+EEV EESED+MV G
Sbjct: 63 VGASGDAAAPVAINVPAAAQAVPSAEETKKKKEEVKEESEDDMVFG 108
BLAST of Cla97C01G000080.2 vs. ExPASy TrEMBL
Match:
A0A397XR95 (Uncharacterized protein OS=Brassica campestris OX=3711 GN=BRAA09T36288Z PE=3 SV=1)
HSP 1 Score: 78.6 bits (192), Expect = 1.5e-11
Identity = 49/106 (46.23%), Postives = 62/106 (58.49%), Query Frame = 0
Query: 13 STSELACTYAALILHGDAISVAAEKISKSVNAASLTVESYWPSLFS------------LS 72
+TSELACTYAALILH D I + AEKI+K V AA++ VESYWPSLF+ ++
Sbjct: 3 NTSELACTYAALILHDDGIEITAEKIAKLVKAANVNVESYWPSLFAKLCQKKNIDDLIMN 62
Query: 73 ISSSAGNAAPAPVD----------------KQEEVMEESEDEMVLG 91
+ +S AAP + K+EEV EESED+MV G
Sbjct: 63 VGASGDAAAPVATNVPAAAQAVPAAEETKKKKEEVKEESEDDMVFG 108
BLAST of Cla97C01G000080.2 vs. TAIR 10
Match:
AT5G24510.1 (60S acidic ribosomal protein family )
HSP 1 Score: 72.4 bits (176), Expect = 2.1e-13
Identity = 50/108 (46.30%), Postives = 62/108 (57.41%), Query Frame = 0
Query: 12 MSTSELACTYAALILHGDAISVAAEKISKSVNAASLTVESYWPSLFS----------LSI 71
MSTSELACTYAALILH D I + AE ISK V A++ VESYWPSLF+ L +
Sbjct: 1 MSTSELACTYAALILHDDGIEITAENISKLVKTANVNVESYWPSLFAKLCEKKNIDDLIM 60
Query: 72 SSSAG---------NAAPA-------PVDKQEE---VMEESEDEMVLG 91
+ AG AAP P +K+ E + EESED+M++G
Sbjct: 61 NVGAGGCGVARPVTTAAPTASQSVSIPEEKKNEMEVIKEESEDDMIIG 108
BLAST of Cla97C01G000080.2 vs. TAIR 10
Match:
AT1G01100.3 (60S acidic ribosomal protein family )
HSP 1 Score: 58.9 bits (141), Expect = 2.4e-09
Identity = 36/93 (38.71%), Postives = 57/93 (61.29%), Query Frame = 0
Query: 12 MST-SELACTYAALILHGDAISVAAEKISKSVNAASLTVESYWPSLFS------------ 71
MST ELAC+YA +IL + I++ A+KI+ V AA +++ESYWP LF+
Sbjct: 1 MSTVGELACSYAVMILEDEGIAITADKIATLVKAAGVSIESYWPMLFAKMAEKRNVTDLI 60
Query: 72 LSISSSAGNAAPAPVD-KQEEVMEESEDEMVLG 91
+++ + G AAPA + K++E EES+ ++ G
Sbjct: 61 MNVGAGGGGAAPAAEEKKKDEPAEESDGDLGFG 93
BLAST of Cla97C01G000080.2 vs. TAIR 10
Match:
AT5G47700.1 (60S acidic ribosomal protein family )
HSP 1 Score: 52.8 bits (125), Expect = 1.7e-07
Identity = 32/73 (43.84%), Postives = 44/73 (60.27%), Query Frame = 0
Query: 12 MST-SELACTYAALILHGDAISVAAEKISKSVNAASLTVESYWPSLFS----------LS 71
MST ELAC+YA +IL + I++ A+KI+ V AA +T+ESYWP LF+ L
Sbjct: 1 MSTVGELACSYAVMILEDEGIAITADKIATLVKAAGVTIESYWPMLFAKMAEKRNVTDLI 60
Query: 72 ISSSAGNAAPAPV 74
++ AG APV
Sbjct: 61 MNVGAGGGGGAPV 73
BLAST of Cla97C01G000080.2 vs. TAIR 10
Match:
AT5G47700.2 (60S acidic ribosomal protein family )
HSP 1 Score: 52.8 bits (125), Expect = 1.7e-07
Identity = 32/73 (43.84%), Postives = 44/73 (60.27%), Query Frame = 0
Query: 12 MST-SELACTYAALILHGDAISVAAEKISKSVNAASLTVESYWPSLFS----------LS 71
MST ELAC+YA +IL + I++ A+KI+ V AA +T+ESYWP LF+ L
Sbjct: 1 MSTVGELACSYAVMILEDEGIAITADKIATLVKAAGVTIESYWPMLFAKMAEKRNVTDLI 60
Query: 72 ISSSAGNAAPAPV 74
++ AG APV
Sbjct: 61 MNVGAGGGGGAPV 73
BLAST of Cla97C01G000080.2 vs. TAIR 10
Match:
AT4G00810.1 (60S acidic ribosomal protein family )
HSP 1 Score: 50.4 bits (119), Expect = 8.7e-07
Identity = 37/110 (33.64%), Postives = 56/110 (50.91%), Query Frame = 0
Query: 12 MST-SELACTYAALILHGDAISVAAEKISKSVNAASLTVESYWPSLF------------- 71
MST ELAC+YA +IL + I++ ++KI+ V AA + +ESYWP LF
Sbjct: 1 MSTVGELACSYAVMILEDEGIAITSDKIATLVKAAGVEIESYWPMLFAKMAEKRNVTDLI 60
Query: 72 --------------SLSISSSAGN---AAPAPVDKQEEVMEESEDEMVLG 91
S + ++AG AAPA +K++E EES+ ++ G
Sbjct: 61 MNVGAGGGGGGAPVSAAAPAAAGGAAAAAPAKEEKKDEPAEESDGDLGFG 110
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| XP_022138164.1 | 1.6e-15 | 53.21 | 60S acidic ribosomal protein P1-like isoform X2 [Momordica charantia] | [more] |
| XP_022138163.1 | 1.5e-13 | 51.43 | 60S acidic ribosomal protein P1-like isoform X1 [Momordica charantia] | [more] |
| XP_006394706.1 | 3.8e-12 | 46.79 | 60S acidic ribosomal protein P1 [Eutrema salsugineum] >ESQ31992.1 hypothetical p... | [more] |
| XP_009111636.1 | 1.4e-11 | 46.23 | 60S acidic ribosomal protein P1 isoform X2 [Brassica rapa] | [more] |
| XP_013659163.1 | 3.2e-11 | 46.23 | 60S acidic ribosomal protein P1 isoform X2 [Brassica napus] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| P52855 | 1.6e-10 | 42.72 | 60S acidic ribosomal protein P1 OS=Zea mays OX=4577 GN=RPP1A PE=1 SV=1 | [more] |
| P27464 | 8.2e-10 | 47.83 | 60S acidic ribosomal protein P1 OS=Polyorchis penicillatus OX=6091 PE=3 SV=1 | [more] |
| P29763 | 2.0e-08 | 40.40 | 60S acidic ribosomal protein P1 OS=Chlamydomonas reinhardtii OX=3055 PE=3 SV=1 | [more] |
| P18660 | 7.7e-08 | 35.64 | 60S acidic ribosomal protein P1 OS=Gallus gallus OX=9031 GN=RPLP1 PE=3 SV=1 | [more] |
| P47955 | 1.0e-07 | 34.86 | 60S acidic ribosomal protein P1 OS=Mus musculus OX=10090 GN=Rplp1 PE=1 SV=1 | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| A0A6J1C9A3 | 7.9e-16 | 53.21 | 60S acidic ribosomal protein P1-like isoform X2 OS=Momordica charantia OX=3673 G... | [more] |
| A0A6J1CC92 | 7.4e-14 | 51.43 | 60S acidic ribosomal protein P1-like isoform X1 OS=Momordica charantia OX=3673 G... | [more] |
| V4KQ04 | 1.8e-12 | 46.79 | Uncharacterized protein OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10005602mg PE=... | [more] |
| M4F610 | 6.9e-12 | 46.23 | Uncharacterized protein OS=Brassica rapa subsp. pekinensis OX=51351 PE=3 SV=1 | [more] |
| A0A397XR95 | 1.5e-11 | 46.23 | Uncharacterized protein OS=Brassica campestris OX=3711 GN=BRAA09T36288Z PE=3 SV=... | [more] |
