Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTTCCTTATTTAGTATTTTTCTTATTTGTATTTTGTATGTGTGTATCTACACTAGTAAGCCTATGTGTAAAGTCTGCAATTATTCAATAGAATATCCAAGCTGAGAGCCCATTTTTAGGGTTCCAAGTTGCCGCCGCCGCCGCCCTGTTCCGTCTCCGATCCGGTCTGCCGCCACTCACTTTTCTCCGTCGATCCGCTCCGATTTGTTCTCCGTTTGATCTGTTCGTCCGCACCATAGATCTACTCGCCCAGATCCGCTGCTCCAAACCCGCTGCGGCACCAGATCTGTCGTTCGCACGCGTCGTTCTGCCTGCCCAGATCTGTTCGGTCGGCACTATCACTCGAGATCTGTCACCGTCGCCCGGATCTGCTTGTGAAGGAGCTCCACCGCCTCCAACAACGAACAGATCTGCTCCAATCCGCACGACTGCAGCCCAGATCTGGTCCGTTCGTGCCGATCTGCTCTGATCAGCCCCGATCCAAGTTTAATATCCGTCACTTCCGTTCGTGCCGACCTGCCGTTCCAGATTCGTCACTTCCACTCAGATCTGACCCGCTCGCGGCCTGCCGTTCGAGGTCCGTCACTTCCGTCAACGACTGTTCTGGTCTCCCAGATCTGTTCGTGTGTCTCTGTCTCCGTTAGTTGGTTAACTTTTCCTGTTTGTCTGTGATGGGCTGTACATTATTTTCACTAGTGGAGTTCCTTTGAGTTATAAGAACACTTTCTCCAAAATGTTAATGCCCCTTTAGTAAGGGTTTGGTTTTTAGTTCTCTTTTTAAAATTTAAATCTTTTTAAAGAAACACTTACACTCCTCGTCATATTCTAAAAACAAATCACTATTTGAGAATTATTTTTTTTAATTTTCAAAATTTTGGTTTGACTTTTGAAAACATGAATAGAAAGTGAATAACAAAATCTTAGTTATGGTGGAAGTAATGTTTATAAATTTAATTTTCAAAAACGAAAATTCAAATTGGTAACAAATGGGGCCGTTTCTTGCTACTGAAAATTCGAAGAATTTTTCTTTTACTTTCTTTTATAGTGTTTGGCTTGAACTCATTTTCTCTAACGCCTAATTGATACCTAAACAAAACCAGGCTGGCTATCTTAATAGATGTTCGAAGTTGCAAACCCAATTACTTGTTATGTGATCAAAGATTAAAGAGATTTAAACATTTGAAGTATCTTCAGAAGAGTAAAGCAGACACAATTTCCAAATATTGTGTGTGTATTCTGTTTTTAGAGATGGAAATACTCTTTGATATTAGATGGACTGGCTTAATCGTTGATACCTGAAGAGTTATGAGAATTACCAAAATCTGGGTTGAGCTTGCTAACTGTGCTTTCACAGGTGAATGGGGAATTTAAGGAGTAAACTGCAATGGATGTACTAACAGAGGCATAGAGTGCAGCACATTGTGATTCCAATTCCACCTGCAACTGCAAACAAAGCCCGGGACAACTCCCTTTTGCCTTCCAGGCCATAAAGAGAAACCATATTTCTTCCATGAATTCTCTGTTTTTACACTCTTCTCTTAGTCCATCACTTACTTGCAAACCTCGGCCGCGTCCTCTTAAGAGGCCTATACATATATGTGCACTACGTGGCTCTCATCATAATACTCGGATATTTGCTCCTTCGATATTATTTCCTTTCAAATTGTGTCCAGCCGTTCATACTAGTAGACCAATCGCCTGTTTTTCAACTCCTTCAAATGAAGGTGTAGTATCTGTAATCAATTTTGAAGATTTAGTTGAGAAGGACTTCTCTTTTCTCGATTCACACGACCTTATTTCCACAGAAGAGCATGATCAAAAGATTAGGCGGATTATTTCTGCTGGAGAGATTGCAGAAAGTTCTCAGGTTATGGTTTCCATTTCTTCAGAAGGATTTGTTGATCAGTTGTTTGACTTAGCTCCTTGCACAAGTTTGCTTGTTGTCCATGATTCTATTTTAACATTAGCTTGTATTAAAGAAAAATATGACAAAGTTAAGTGTTGGCAAGGAGAAGTTATATATGTACCAGAAAAATGGGGACCTTTCGATGTTGTATTTCTCTATTATCTTCCAGCCATGCCTTTCGAACTTGACGCAATTGTTGGAGCACTTTCAAAACGTTGTGTATCAGGTACAATTCTTATTTTGTTCTGTAAATTTCAAATTTTAGTGTATTACATTGGCTACTCGAATTGCTGAGTATGTGGCCAATTTATTCTAAGTTCCCAAATGATCTGTTTGTTTCTATAGTTTGTATTTGTTGGTAATTGCTGAGTATATGGCGTATTGAACTGTATTAGATTTAATGTGGTTCAATACACACGGAAAATTATGGGCATGTGTGCACGCATTATATAAACAGTTCTTATTTTGTAGCATATGCTATGCTTACACTGTTTTTCTGGCAAATAACCACGCTTAATTGTTTTGTGTACATAACTTCTTACCATATTTGTTCGATCTCCGTATCATATGTTATGGCTTTTAGCAAATAAAATCACATGGAAACGAAATTCTTGCTTGATTTATTATAAAGTCATCTATTTTCTTTGTTGCTCAATAGGTGGAAGACTAGTTATTAGCCATCCCAACGGAAGGAAAGCATTAGAGCAAGAACAACAACAGTTCCCAGATGTCGTAGTTTCGGATTTACCTGATAGGATGACTTTGCAGAAAGCTGCTGCAGATCACTCTTTTGACTTGATTGAATTTATAGATGAGTATAGCTTTTATCTTGCAATTTTGAAGTTCCACAAGGATAGAAGTTAAGCCTAAATATTTCATCAAGGCTAGGAGTTCCATGTCTAAATCCTGCTGCAAAACTTTTGTGATTTGGATAAACAAAATTTTGCTGTTTTATCATTTATCAATGGTACAGTACATACTATTTTATGAAATCCTGAATCAGATCAAGTTCCTAAGTTGGGTATAGGTGAAAAATGATAATAACTAAATGAGCAAGATTTGGGCGTCTTGACAATTTCCTTTCAAAGATGCTTTTAACTGAAGATTAATGGAATAAAATTACAAATTATAGGAGAGATTTACTGTGCTCACGCTGTGCCTTCGCCTGCACCTGTATGTTAACCAAAATGTGAATAATCTCATGGATGTGGTTGAGATTCAGGTCCCGGTGGTTTTGAAGAATTCAGAAGTGGCTGGAGGGCCTTAACCACAATTGTCATGTTTGGCCTGAAGTCAGCCTCGTACTGAACACACAGGGCTGCAACTGCTGCCAACTGAGAGTGATTCACATGAAAATAATAGTGGAATAAGAATCCAATCTGAAACATCTACAAAGATGAAAACTAATATGCCTTTAAACTTTGTCGTTGTAACGTAGTAAAATTGCCCAGATTTCAGTTCAGGTTTGTCAGGTTTGTGTGATTAGAGGTTAACTTGATTAATTCCTGGTTGAAATTTTGATTACCGAAGACAATGTATGGGAGTGTTTATGACCTTCCTACCCCAGAGTAATAGATGATTATCATGGTTTCT
mRNA sequence
TTTCCTTATTTAGTATTTTTCTTATTTGTATTTTGTATGTGTGTATCTACACTAGTAAGCCTATGTGTAAAGTCTGCAATTATTCAATAGAATATCCAAGCTGAGAGCCCATTTTTAGGGTTCCAAGTTGCCGCCGCCGCCGCCCTGTTCCGTCTCCGATCCGGTCTGCCGCCACTCACTTTTCTCCGTCGATCCGCTCCGATTTGTTCTCCGTTTGATCTGTTCGTCCGCACCATAGATCTACTCGCCCAGATCCGCTGCTCCAAACCCGCTGCGGCACCAGATCTGTCGTTCGCACGCGTCGTTCTGCCTGCCCAGATCTGTTCGGTCGGCACTATCACTCGAGATCTGTCACCGTCGCCCGGATCTGCTTGTGAAGGAGCTCCACCGCCTCCAACAACGAACAGATCTGCTCCAATCCGCACGACTGCAGCCCAGATCTGGTCCGTTCGTGCCGATCTGCTCTGATCAGCCCCGATCCAAGTTTAATATCCGTCACTTCCGTTCGTGCCGACCTGCCGTTCCAGATTCGTCACTTCCACTCAGATCTGACCCGCTCGCGGCCTGCCGTTCGAGGTGAATGGGGAATTTAAGGAGTAAACTGCAATGGATGTACTAACAGAGGCATAGAGTGCAGCACATTGTGATTCCAATTCCACCTGCAACTGCAAACAAAGCCCGGGACAACTCCCTTTTGCCTTCCAGGCCATAAAGAGAAACCATATTTCTTCCATGAATTCTCTGTTTTTACACTCTTCTCTTAGTCCATCACTTACTTGCAAACCTCGGCCGCGTCCTCTTAAGAGGCCTATACATATATGTGCACTACGTGGCTCTCATCATAATACTCGGATATTTGCTCCTTCGATATTATTTCCTTTCAAATTGTGTCCAGCCGTTCATACTAGTAGACCAATCGCCTGTTTTTCAACTCCTTCAAATGAAGGTGTAGTATCTGTAATCAATTTTGAAGATTTAGTTGAGAAGGACTTCTCTTTTCTCGATTCACACGACCTTATTTCCACAGAAGAGCATGATCAAAAGATTAGGCGGATTATTTCTGCTGGAGAGATTGCAGAAAGTTCTCAGGTTATGGTTTCCATTTCTTCAGAAGGATTTGTTGATCAGTTGTTTGACTTAGCTCCTTGCACAAGTTTGCTTGTTGTCCATGATTCTATTTTAACATTAGCTTGTATTAAAGAAAAATATGACAAAGTTAAGTGTTGGCAAGGAGAAGTTATATATGTACCAGAAAAATGGGGACCTTTCGATGTTGTATTTCTCTATTATCTTCCAGCCATGCCTTTCGAACTTGACGCAATTGTTGGAGCACTTTCAAAACGTTGTGTATCAGGTGGAAGACTAGTTATTAGCCATCCCAACGGAAGGAAAGCATTAGAGCAAGAACAACAACAGTTCCCAGATGTCGTAGTTTCGGATTTACCTGATAGGATGACTTTGCAGAAAGCTGCTGCAGATCACTCTTTTGACTTGATTGAATTTATAGATGAGTATAGCTTTTATCTTGCAATTTTGAAGTTCCACAAGGATAGAAGTTAAGCCTAAATATTTCATCAAGGCTAGGAGTTCCATGTCTAAATCCTGCTGCAAAACTTTTGTGATTTGGATAAACAAAATTTTGCTGTTTTATCATTTATCAATGGTACAGTACATACTATTTTATGAAATCCTGAATCAGATCAAGTTCCTAAGTTGGGTATAGGTGAAAAATGATAATAACTAAATGAGCAAGATTTGGGCGTCTTGACAATTTCCTTTCAAAGATGCTTTTAACTGAAGATTAATGGAATAAAATTACAAATTATAGGAGAGATTTACTGTGCTCACGCTGTGCCTTCGCCTGCACCTGTATGTTAACCAAAATGTGAATAATCTCATGGATGTGGTTGAGATTCAGGTCCCGGTGGTTTTGAAGAATTCAGAAGTGGCTGGAGGGCCTTAACCACAATTGTCATGTTTGGCCTGAAGTCAGCCTCGTACTGAACACACAGGGCTGCAACTGCTGCCAACTGAGAGTGATTCACATGAAAATAATAGTGGAATAAGAATCCAATCTGAAACATCTACAAAGATGAAAACTAATATGCCTTTAAACTTTGTCGTTGTAACGTAGTAAAATTGCCCAGATTTCAGTTCAGGTTTGTCAGGTTTGTGTGATTAGAGGTTAACTTGATTAATTCCTGGTTGAAATTTTGATTACCGAAGACAATGTATGGGAGTGTTTATGACCTTCCTACCCCAGAGTAATAGATGATTATCATGGTTTCT
Coding sequence (CDS)
ATGAATTCTCTGTTTTTACACTCTTCTCTTAGTCCATCACTTACTTGCAAACCTCGGCCGCGTCCTCTTAAGAGGCCTATACATATATGTGCACTACGTGGCTCTCATCATAATACTCGGATATTTGCTCCTTCGATATTATTTCCTTTCAAATTGTGTCCAGCCGTTCATACTAGTAGACCAATCGCCTGTTTTTCAACTCCTTCAAATGAAGGTGTAGTATCTGTAATCAATTTTGAAGATTTAGTTGAGAAGGACTTCTCTTTTCTCGATTCACACGACCTTATTTCCACAGAAGAGCATGATCAAAAGATTAGGCGGATTATTTCTGCTGGAGAGATTGCAGAAAGTTCTCAGGTTATGGTTTCCATTTCTTCAGAAGGATTTGTTGATCAGTTGTTTGACTTAGCTCCTTGCACAAGTTTGCTTGTTGTCCATGATTCTATTTTAACATTAGCTTGTATTAAAGAAAAATATGACAAAGTTAAGTGTTGGCAAGGAGAAGTTATATATGTACCAGAAAAATGGGGACCTTTCGATGTTGTATTTCTCTATTATCTTCCAGCCATGCCTTTCGAACTTGACGCAATTGTTGGAGCACTTTCAAAACGTTGTGTATCAGGTGGAAGACTAGTTATTAGCCATCCCAACGGAAGGAAAGCATTAGAGCAAGAACAACAACAGTTCCCAGATGTCGTAGTTTCGGATTTACCTGATAGGATGACTTTGCAGAAAGCTGCTGCAGATCACTCTTTTGACTTGATTGAATTTATAGATGAGTATAGCTTTTATCTTGCAATTTTGAAGTTCCACAAGGATAGAAGTTAA
Protein sequence
MNSLFLHSSLSPSLTCKPRPRPLKRPIHICALRGSHHNTRIFAPSILFPFKLCPAVHTSRPIACFSTPSNEGVVSVINFEDLVEKDFSFLDSHDLISTEEHDQKIRRIISAGEIAESSQVMVSISSEGFVDQLFDLAPCTSLLVVHDSILTLACIKEKYDKVKCWQGEVIYVPEKWGPFDVVFLYYLPAMPFELDAIVGALSKRCVSGGRLVISHPNGRKALEQEQQQFPDVVVSDLPDRMTLQKAAADHSFDLIEFIDEYSFYLAILKFHKDRS
Homology
BLAST of ClCG10G017680.1 vs. NCBI nr
Match:
XP_038905691.1 (uncharacterized protein LOC120091662 [Benincasa hispida])
HSP 1 Score: 481.9 bits (1239), Expect = 3.7e-132
Identity = 238/275 (86.55%), Postives = 251/275 (91.27%), Query Frame = 0
Query: 1 MNSLFLHSSLSPSLTCKPRPRPLKRPIHICALRGSHHNTRIFAPSILFPFKLCPAVHTSR 60
MNSLFLHSSL PS TCKP+P LKR IHIC LRGSHHNTRIFAP +LFPFKL PA+H ++
Sbjct: 1 MNSLFLHSSLGPSFTCKPQPCSLKRNIHICTLRGSHHNTRIFAP-VLFPFKLYPAIHINK 60
Query: 61 PIACFSTPSNEGVVSVINFEDLVEKDFSFLDSHDLISTEEHDQKIRRIISAGEIAESSQV 120
I CFSTP +EGVVSVINFEDLVEKDFSFLDS + STEEHDQKIRRIISAGEI ESSQV
Sbjct: 61 SITCFSTPPSEGVVSVINFEDLVEKDFSFLDSDEFSSTEEHDQKIRRIISAGEITESSQV 120
Query: 121 MVSISSEGFVDQLFDLAPCTSLLVVHDSILTLACIKEKYDKVKCWQGEVIYVPEKWGPFD 180
MVSISSEGFVDQLFDLAPC SLLVVHDSILTLACIKEKYDKVKCWQGEVIYVPEKWGPFD
Sbjct: 121 MVSISSEGFVDQLFDLAPCRSLLVVHDSILTLACIKEKYDKVKCWQGEVIYVPEKWGPFD 180
Query: 181 VVFLYYLPAMPFELDAIVGALSKRCVSGGRLVISHPNGRKALEQEQQQFPDVVVSDLPDR 240
VVFLYYLPAMPFELDAI ALSKRCV+G RLVISHPNGRK LEQEQQQFPDVVVSDLP+R
Sbjct: 181 VVFLYYLPAMPFELDAIFEALSKRCVAGARLVISHPNGRKGLEQEQQQFPDVVVSDLPER 240
Query: 241 MTLQKAAADHSFDLIEFIDEYSFYLAILKFHKDRS 276
M L+ AAADHSF+L EFIDEY+FYLA+LKFHKDRS
Sbjct: 241 MNLENAAADHSFNLTEFIDEYNFYLAVLKFHKDRS 274
BLAST of ClCG10G017680.1 vs. NCBI nr
Match:
XP_004136559.1 (uncharacterized protein LOC101219545 [Cucumis sativus] >KAE8651132.1 hypothetical protein Csa_002541 [Cucumis sativus])
HSP 1 Score: 466.5 bits (1199), Expect = 1.6e-127
Identity = 237/275 (86.18%), Postives = 245/275 (89.09%), Query Frame = 0
Query: 1 MNSLFLHSSLSPSLTCKPRPRPLKRPIHICALRGSHHNTRIFAPSILFPFKLCPAVHTSR 60
MNSLFLHSSL PS+TCKPR PL+RPI ICALRGSHHNTRIFAP I F PA+H S
Sbjct: 1 MNSLFLHSSLVPSVTCKPRSFPLRRPIRICALRGSHHNTRIFAPLISF-----PALHISN 60
Query: 61 PIACFSTPSNEGVVSVINFEDLVEKDFSFLDSHDLISTEEHDQKIRRIISAGEIAESSQV 120
IAC STPSNEGVVSV+NFEDLVEKDFSFLDS D S EEH QKIRRIISAGEI ESSQV
Sbjct: 61 SIACSSTPSNEGVVSVVNFEDLVEKDFSFLDSDDFSSIEEHGQKIRRIISAGEIVESSQV 120
Query: 121 MVSISSEGFVDQLFDLAPCTSLLVVHDSILTLACIKEKYDKVKCWQGEVIYVPEKWGPFD 180
MVSISSEGFVDQLF LAP SLLVVHDSILTLACIKEKYDKVKCWQGEVIYVPEKWGPFD
Sbjct: 121 MVSISSEGFVDQLFQLAPSRSLLVVHDSILTLACIKEKYDKVKCWQGEVIYVPEKWGPFD 180
Query: 181 VVFLYYLPAMPFELDAIVGALSKRCVSGGRLVISHPNGRKALEQEQQQFPDVVVSDLPDR 240
VFLYYLPAMPFELDAI GALS+RCV+G RLVISHPNGRKALEQEQQQFPDVVVSDLPDR
Sbjct: 181 AVFLYYLPAMPFELDAIFGALSERCVAGARLVISHPNGRKALEQEQQQFPDVVVSDLPDR 240
Query: 241 MTLQKAAADHSFDLIEFIDEYSFYLAILKFHKDRS 276
MTLQKAAADHSFDL EFIDE+ FYLAILKF+KD S
Sbjct: 241 MTLQKAAADHSFDLTEFIDEHGFYLAILKFNKDIS 270
BLAST of ClCG10G017680.1 vs. NCBI nr
Match:
XP_008443029.1 (PREDICTED: uncharacterized protein LOC103486747 [Cucumis melo] >KAA0043750.1 uncharacterized protein E6C27_scaffold236G00790 [Cucumis melo var. makuwa] >TYK25383.1 uncharacterized protein E5676_scaffold352G005240 [Cucumis melo var. makuwa])
HSP 1 Score: 457.6 bits (1176), Expect = 7.6e-125
Identity = 234/277 (84.48%), Postives = 245/277 (88.45%), Query Frame = 0
Query: 1 MNSLFLHSSLSPSLTCKPRPRPLK--RPIHICALRGSHHNTRIFAPSILFPFKLCPAVHT 60
MNSLFLHSSL PSLTC PR PLK RPIH+CA RGSHHNTRIFAPSI F PA+H
Sbjct: 1 MNSLFLHSSLVPSLTCNPRSFPLKRLRPIHMCAPRGSHHNTRIFAPSISF-----PALHI 60
Query: 61 SRPIACFSTPSNEGVVSVINFEDLVEKDFSFLDSHDLISTEEHDQKIRRIISAGEIAESS 120
S A STPSNEGVVSV+NFEDLVEKDFSFLDS D S EEHD+KIRRIISAGEI ESS
Sbjct: 61 SNSAARSSTPSNEGVVSVVNFEDLVEKDFSFLDSDDFSSVEEHDRKIRRIISAGEIVESS 120
Query: 121 QVMVSISSEGFVDQLFDLAPCTSLLVVHDSILTLACIKEKYDKVKCWQGEVIYVPEKWGP 180
QVMVSISSEGFVDQLF LAP SLLVVHDSILTLACIKEKYDKVKCWQGE+IYVPEKWGP
Sbjct: 121 QVMVSISSEGFVDQLFQLAPSRSLLVVHDSILTLACIKEKYDKVKCWQGEIIYVPEKWGP 180
Query: 181 FDVVFLYYLPAMPFELDAIVGALSKRCVSGGRLVISHPNGRKALEQEQQQFPDVVVSDLP 240
FD VFLYYLPAMPFELDAI GALS+RCV+G RLVISHP+GRKALEQE+QQFPDVVVSDLP
Sbjct: 181 FDAVFLYYLPAMPFELDAIFGALSERCVAGARLVISHPDGRKALEQERQQFPDVVVSDLP 240
Query: 241 DRMTLQKAAADHSFDLIEFIDEYSFYLAILKFHKDRS 276
DRMTLQKAAADHSFDL EFIDE+ FYLAILKF+KDRS
Sbjct: 241 DRMTLQKAAADHSFDLTEFIDEHGFYLAILKFNKDRS 272
BLAST of ClCG10G017680.1 vs. NCBI nr
Match:
KAG6596247.1 (hypothetical protein SDJN03_09427, partial [Cucurbita argyrosperma subsp. sororia] >KAG7027789.1 hypothetical protein SDJN02_08966, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 442.2 bits (1136), Expect = 3.3e-120
Identity = 220/273 (80.59%), Postives = 237/273 (86.81%), Query Frame = 0
Query: 1 MNSLFLHSSLSPSLTCKPRPRPLKRPIHICALRGSHHNTRIFAPSILFPFKLCPAVHTSR 60
MNSLFLHSSL P L CKP P PLK+PIH+ AL G +TRIF+ S LFP KLCP++H SR
Sbjct: 1 MNSLFLHSSLGPPLACKPLPCPLKKPIHMGALLGFRCSTRIFSRSALFPVKLCPSLHISR 60
Query: 61 PIACFSTPSNEGVVSVINFEDLVEKDFSFLDSHDLISTEEHDQKIRRIISAGEIAESSQV 120
I C STPSNEGVVSVINFEDLVEKDFSFLDS D S EEHDQKIRRIISAGEIAESSQV
Sbjct: 61 SITCSSTPSNEGVVSVINFEDLVEKDFSFLDSDDFGSIEEHDQKIRRIISAGEIAESSQV 120
Query: 121 MVSISSEGFVDQLFDLAPCTSLLVVHDSILTLACIKEKYDKVKCWQGEVIYVPEKWGPFD 180
MV+ISSEGFVD+L+D APC SLLVVHD+IL LACIKEKYDKVKCWQGEVIYVPEKWGPFD
Sbjct: 121 MVAISSEGFVDRLYDSAPCRSLLVVHDAILPLACIKEKYDKVKCWQGEVIYVPEKWGPFD 180
Query: 181 VVFLYYLPAMPFELDAIVGALSKRCVSGGRLVISHPNGRKALEQEQQQFPDVVVSDLPDR 240
VVFLYYLPAMPFELD I G L++RC+ GGRLVISHP GRKAL+QEQQQF DVVVSDLPDR
Sbjct: 181 VVFLYYLPAMPFELDTIFGTLTQRCLPGGRLVISHPGGRKALQQEQQQFSDVVVSDLPDR 240
Query: 241 MTLQKAAADHSFDLIEFIDEYSFYLAILKFHKD 274
TLQK AADHSF L EF+DE FYLA+LKF+KD
Sbjct: 241 TTLQKVAADHSFGLTEFVDEDGFYLAVLKFNKD 273
BLAST of ClCG10G017680.1 vs. NCBI nr
Match:
XP_022940190.1 (uncharacterized protein LOC111445889 [Cucurbita moschata])
HSP 1 Score: 441.8 bits (1135), Expect = 4.3e-120
Identity = 220/273 (80.59%), Postives = 237/273 (86.81%), Query Frame = 0
Query: 1 MNSLFLHSSLSPSLTCKPRPRPLKRPIHICALRGSHHNTRIFAPSILFPFKLCPAVHTSR 60
MNSLFLHSSL P L CKP P PLK PIH+ AL G +TRIF+ S LFP KLCP++H SR
Sbjct: 1 MNSLFLHSSLGPPLACKPLPCPLKNPIHMRALLGFRCSTRIFSRSALFPVKLCPSLHISR 60
Query: 61 PIACFSTPSNEGVVSVINFEDLVEKDFSFLDSHDLISTEEHDQKIRRIISAGEIAESSQV 120
I C STPSNEGVVSVINFEDLVEKDFSFLDS D S EEHD+KIRRIISAGEIAESSQV
Sbjct: 61 SITCSSTPSNEGVVSVINFEDLVEKDFSFLDSDDFGSIEEHDEKIRRIISAGEIAESSQV 120
Query: 121 MVSISSEGFVDQLFDLAPCTSLLVVHDSILTLACIKEKYDKVKCWQGEVIYVPEKWGPFD 180
MV+ISSEGFVD+L+D APC SLLVVHD+IL LACIKEKYDKVKCWQGEVIYVPEKWGPFD
Sbjct: 121 MVAISSEGFVDRLYDSAPCRSLLVVHDAILPLACIKEKYDKVKCWQGEVIYVPEKWGPFD 180
Query: 181 VVFLYYLPAMPFELDAIVGALSKRCVSGGRLVISHPNGRKALEQEQQQFPDVVVSDLPDR 240
VVFLYYLPAMPFELDAI GAL++RC+ GGRLVISHP GRK L+QEQQQF DVVVSDLPDR
Sbjct: 181 VVFLYYLPAMPFELDAIFGALTQRCLPGGRLVISHPGGRKVLQQEQQQFSDVVVSDLPDR 240
Query: 241 MTLQKAAADHSFDLIEFIDEYSFYLAILKFHKD 274
TLQK AADHSF L EF+DE FYLA+LKF+KD
Sbjct: 241 TTLQKVAADHSFGLTEFVDEDGFYLAVLKFNKD 273
BLAST of ClCG10G017680.1 vs. ExPASy TrEMBL
Match:
A0A5D3DP12 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G005240 PE=4 SV=1)
HSP 1 Score: 457.6 bits (1176), Expect = 3.7e-125
Identity = 234/277 (84.48%), Postives = 245/277 (88.45%), Query Frame = 0
Query: 1 MNSLFLHSSLSPSLTCKPRPRPLK--RPIHICALRGSHHNTRIFAPSILFPFKLCPAVHT 60
MNSLFLHSSL PSLTC PR PLK RPIH+CA RGSHHNTRIFAPSI F PA+H
Sbjct: 1 MNSLFLHSSLVPSLTCNPRSFPLKRLRPIHMCAPRGSHHNTRIFAPSISF-----PALHI 60
Query: 61 SRPIACFSTPSNEGVVSVINFEDLVEKDFSFLDSHDLISTEEHDQKIRRIISAGEIAESS 120
S A STPSNEGVVSV+NFEDLVEKDFSFLDS D S EEHD+KIRRIISAGEI ESS
Sbjct: 61 SNSAARSSTPSNEGVVSVVNFEDLVEKDFSFLDSDDFSSVEEHDRKIRRIISAGEIVESS 120
Query: 121 QVMVSISSEGFVDQLFDLAPCTSLLVVHDSILTLACIKEKYDKVKCWQGEVIYVPEKWGP 180
QVMVSISSEGFVDQLF LAP SLLVVHDSILTLACIKEKYDKVKCWQGE+IYVPEKWGP
Sbjct: 121 QVMVSISSEGFVDQLFQLAPSRSLLVVHDSILTLACIKEKYDKVKCWQGEIIYVPEKWGP 180
Query: 181 FDVVFLYYLPAMPFELDAIVGALSKRCVSGGRLVISHPNGRKALEQEQQQFPDVVVSDLP 240
FD VFLYYLPAMPFELDAI GALS+RCV+G RLVISHP+GRKALEQE+QQFPDVVVSDLP
Sbjct: 181 FDAVFLYYLPAMPFELDAIFGALSERCVAGARLVISHPDGRKALEQERQQFPDVVVSDLP 240
Query: 241 DRMTLQKAAADHSFDLIEFIDEYSFYLAILKFHKDRS 276
DRMTLQKAAADHSFDL EFIDE+ FYLAILKF+KDRS
Sbjct: 241 DRMTLQKAAADHSFDLTEFIDEHGFYLAILKFNKDRS 272
BLAST of ClCG10G017680.1 vs. ExPASy TrEMBL
Match:
A0A1S3B7V6 (uncharacterized protein LOC103486747 OS=Cucumis melo OX=3656 GN=LOC103486747 PE=4 SV=1)
HSP 1 Score: 457.6 bits (1176), Expect = 3.7e-125
Identity = 234/277 (84.48%), Postives = 245/277 (88.45%), Query Frame = 0
Query: 1 MNSLFLHSSLSPSLTCKPRPRPLK--RPIHICALRGSHHNTRIFAPSILFPFKLCPAVHT 60
MNSLFLHSSL PSLTC PR PLK RPIH+CA RGSHHNTRIFAPSI F PA+H
Sbjct: 1 MNSLFLHSSLVPSLTCNPRSFPLKRLRPIHMCAPRGSHHNTRIFAPSISF-----PALHI 60
Query: 61 SRPIACFSTPSNEGVVSVINFEDLVEKDFSFLDSHDLISTEEHDQKIRRIISAGEIAESS 120
S A STPSNEGVVSV+NFEDLVEKDFSFLDS D S EEHD+KIRRIISAGEI ESS
Sbjct: 61 SNSAARSSTPSNEGVVSVVNFEDLVEKDFSFLDSDDFSSVEEHDRKIRRIISAGEIVESS 120
Query: 121 QVMVSISSEGFVDQLFDLAPCTSLLVVHDSILTLACIKEKYDKVKCWQGEVIYVPEKWGP 180
QVMVSISSEGFVDQLF LAP SLLVVHDSILTLACIKEKYDKVKCWQGE+IYVPEKWGP
Sbjct: 121 QVMVSISSEGFVDQLFQLAPSRSLLVVHDSILTLACIKEKYDKVKCWQGEIIYVPEKWGP 180
Query: 181 FDVVFLYYLPAMPFELDAIVGALSKRCVSGGRLVISHPNGRKALEQEQQQFPDVVVSDLP 240
FD VFLYYLPAMPFELDAI GALS+RCV+G RLVISHP+GRKALEQE+QQFPDVVVSDLP
Sbjct: 181 FDAVFLYYLPAMPFELDAIFGALSERCVAGARLVISHPDGRKALEQERQQFPDVVVSDLP 240
Query: 241 DRMTLQKAAADHSFDLIEFIDEYSFYLAILKFHKDRS 276
DRMTLQKAAADHSFDL EFIDE+ FYLAILKF+KDRS
Sbjct: 241 DRMTLQKAAADHSFDLTEFIDEHGFYLAILKFNKDRS 272
BLAST of ClCG10G017680.1 vs. ExPASy TrEMBL
Match:
A0A6J1FPV5 (uncharacterized protein LOC111445889 OS=Cucurbita moschata OX=3662 GN=LOC111445889 PE=4 SV=1)
HSP 1 Score: 441.8 bits (1135), Expect = 2.1e-120
Identity = 220/273 (80.59%), Postives = 237/273 (86.81%), Query Frame = 0
Query: 1 MNSLFLHSSLSPSLTCKPRPRPLKRPIHICALRGSHHNTRIFAPSILFPFKLCPAVHTSR 60
MNSLFLHSSL P L CKP P PLK PIH+ AL G +TRIF+ S LFP KLCP++H SR
Sbjct: 1 MNSLFLHSSLGPPLACKPLPCPLKNPIHMRALLGFRCSTRIFSRSALFPVKLCPSLHISR 60
Query: 61 PIACFSTPSNEGVVSVINFEDLVEKDFSFLDSHDLISTEEHDQKIRRIISAGEIAESSQV 120
I C STPSNEGVVSVINFEDLVEKDFSFLDS D S EEHD+KIRRIISAGEIAESSQV
Sbjct: 61 SITCSSTPSNEGVVSVINFEDLVEKDFSFLDSDDFGSIEEHDEKIRRIISAGEIAESSQV 120
Query: 121 MVSISSEGFVDQLFDLAPCTSLLVVHDSILTLACIKEKYDKVKCWQGEVIYVPEKWGPFD 180
MV+ISSEGFVD+L+D APC SLLVVHD+IL LACIKEKYDKVKCWQGEVIYVPEKWGPFD
Sbjct: 121 MVAISSEGFVDRLYDSAPCRSLLVVHDAILPLACIKEKYDKVKCWQGEVIYVPEKWGPFD 180
Query: 181 VVFLYYLPAMPFELDAIVGALSKRCVSGGRLVISHPNGRKALEQEQQQFPDVVVSDLPDR 240
VVFLYYLPAMPFELDAI GAL++RC+ GGRLVISHP GRK L+QEQQQF DVVVSDLPDR
Sbjct: 181 VVFLYYLPAMPFELDAIFGALTQRCLPGGRLVISHPGGRKVLQQEQQQFSDVVVSDLPDR 240
Query: 241 MTLQKAAADHSFDLIEFIDEYSFYLAILKFHKD 274
TLQK AADHSF L EF+DE FYLA+LKF+KD
Sbjct: 241 TTLQKVAADHSFGLTEFVDEDGFYLAVLKFNKD 273
BLAST of ClCG10G017680.1 vs. ExPASy TrEMBL
Match:
A0A6J1I6B9 (uncharacterized protein LOC111470036 OS=Cucurbita maxima OX=3661 GN=LOC111470036 PE=4 SV=1)
HSP 1 Score: 441.4 bits (1134), Expect = 2.7e-120
Identity = 221/273 (80.95%), Postives = 238/273 (87.18%), Query Frame = 0
Query: 1 MNSLFLHSSLSPSLTCKPRPRPLKRPIHICALRGSHHNTRIFAPSILFPFKLCPAVHTSR 60
MNSLFLHSSL P L CKP P PLKRPIH+ AL G +TRIF+ S L P KLCP++H SR
Sbjct: 1 MNSLFLHSSLGPPLACKPLPCPLKRPIHMRALLGFRCSTRIFSRSELSPVKLCPSLHISR 60
Query: 61 PIACFSTPSNEGVVSVINFEDLVEKDFSFLDSHDLISTEEHDQKIRRIISAGEIAESSQV 120
I C STPSNEGVVSVINFEDLVEKDFSFLDS D S EEHD+KIRRIISAGEIAESSQV
Sbjct: 61 SITCSSTPSNEGVVSVINFEDLVEKDFSFLDSDDFGSIEEHDEKIRRIISAGEIAESSQV 120
Query: 121 MVSISSEGFVDQLFDLAPCTSLLVVHDSILTLACIKEKYDKVKCWQGEVIYVPEKWGPFD 180
MV+ISSEGFVD+L+D APC SLLVVHD+IL LACIKEKYDKVKCWQGEVIYVPEKWGPFD
Sbjct: 121 MVAISSEGFVDRLYDSAPCRSLLVVHDAILPLACIKEKYDKVKCWQGEVIYVPEKWGPFD 180
Query: 181 VVFLYYLPAMPFELDAIVGALSKRCVSGGRLVISHPNGRKALEQEQQQFPDVVVSDLPDR 240
VVFLYYLPAMPFELDAI GAL++RC+ GGRLVISHP GRKAL+QEQQQF DVVVSDLPDR
Sbjct: 181 VVFLYYLPAMPFELDAIFGALTQRCLPGGRLVISHPGGRKALQQEQQQFSDVVVSDLPDR 240
Query: 241 MTLQKAAADHSFDLIEFIDEYSFYLAILKFHKD 274
TLQK AADHSF L EF+DE FYLA+LKF+KD
Sbjct: 241 TTLQKVAADHSFGLTEFVDEDGFYLAVLKFNKD 273
BLAST of ClCG10G017680.1 vs. ExPASy TrEMBL
Match:
A0A6J1DD17 (uncharacterized protein LOC111019361 OS=Momordica charantia OX=3673 GN=LOC111019361 PE=4 SV=1)
HSP 1 Score: 438.7 bits (1127), Expect = 1.8e-119
Identity = 219/275 (79.64%), Postives = 237/275 (86.18%), Query Frame = 0
Query: 1 MNSLFLHSSLSPSLTCKPRPRPLKRPIHICALRGSHHNTRIFAPSILFPFKLCPAVHTSR 60
MNSL LHSSL PSLT KP P LKRP+ IC L GSH + RIF+ S+ L P++H S+
Sbjct: 1 MNSLSLHSSLGPSLTSKPLPCSLKRPLPICTLCGSHRSARIFSRSV----SLYPSLHVSK 60
Query: 61 PIACFSTPSNEGVVSVINFEDLVEKDFSFLDSHDLISTEEHDQKIRRIISAGEIAESSQV 120
P+ C STPSNEGVVSVINFEDLVEKDFSFLDS D S+EE+DQKIRRIISAGE+AESSQV
Sbjct: 61 PVTCASTPSNEGVVSVINFEDLVEKDFSFLDSDDFSSSEEYDQKIRRIISAGEVAESSQV 120
Query: 121 MVSISSEGFVDQLFDLAPCTSLLVVHDSILTLACIKEKYDKVKCWQGEVIYVPEKWGPFD 180
MVSI SEGFVDQLFD APC SLLV+HDSILTLACIKEKYDKVKCWQGEVIYVPEKWGPFD
Sbjct: 121 MVSIPSEGFVDQLFDSAPCRSLLVLHDSILTLACIKEKYDKVKCWQGEVIYVPEKWGPFD 180
Query: 181 VVFLYYLPAMPFELDAIVGALSKRCVSGGRLVISHPNGRKALEQEQQQFPDVVVSDLPDR 240
VVFLYYLPAMPFELDAI G LSKRCV G RLVISHPNG+ ALE+EQQQFPDVVVS LPD+
Sbjct: 181 VVFLYYLPAMPFELDAIFGELSKRCVPGARLVISHPNGKTALEEEQQQFPDVVVSGLPDK 240
Query: 241 MTLQKAAADHSFDLIEFIDEYSFYLAILKFHKDRS 276
MTLQK AADHS DL EF+D+ FYLA+LKFHKDRS
Sbjct: 241 MTLQKVAADHSLDLTEFVDDNGFYLAVLKFHKDRS 271
BLAST of ClCG10G017680.1 vs. TAIR 10
Match:
AT2G41950.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, plant-type cell wall; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 53 Blast hits to 53 proteins in 24 species: Archae - 0; Bacteria - 27; Metazoa - 0; Fungi - 0; Plants - 26; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )
HSP 1 Score: 258.8 bits (660), Expect = 4.8e-69
Identity = 130/213 (61.03%), Postives = 161/213 (75.59%), Query Frame = 0
Query: 60 RPIACFSTPSNEGVVSVINFEDLVEKDFSFLDSHDLISTEEHDQKIRRIISAGEIAESSQ 119
R S+ EG VSV++F EKD+SFL+S ++ ST EH QKI RII AGE++ESS+
Sbjct: 57 RAFCVSSSSPPEGTVSVVDFH---EKDWSFLESMEIDST-EHTQKIERIIKAGELSESSR 116
Query: 120 VMVSISSEGFVDQLFDLAPCTSLLVVHDSILTLACIKEKYDKVKCWQGEVIYVPEKWGPF 179
V+VSISSE FVD+L + +P LL+VHDS+ TLACIKEKYDKVKCWQGE+IYVPEKW P
Sbjct: 117 VLVSISSETFVDRLVESSPSQLLLIVHDSLFTLACIKEKYDKVKCWQGEMIYVPEKWSPL 176
Query: 180 DVVFLYYLPAMPFELDAIVGALSKRCVSGGRLVISHPNGRKALEQEQQQFPDVVVSDLPD 239
D VFLY+LPA+PF+LD + LS+RC SG R+VISHP GR LEQ++++F DVVVSDLPD
Sbjct: 177 DAVFLYFLPALPFDLDELFKTLSQRCSSGARVVISHPQGRLGLEQQRKEFSDVVVSDLPD 236
Query: 240 RMTLQKAAADHSFDLIEFIDEYSFYLAILKFHK 273
TL A HSF+L +F+DE YLA+LK K
Sbjct: 237 ESTLSNVAEKHSFELTQFVDEQGLYLAVLKSSK 265
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| XP_038905691.1 | 3.7e-132 | 86.55 | uncharacterized protein LOC120091662 [Benincasa hispida] | [more] |
| XP_004136559.1 | 1.6e-127 | 86.18 | uncharacterized protein LOC101219545 [Cucumis sativus] >KAE8651132.1 hypothetica... | [more] |
| XP_008443029.1 | 7.6e-125 | 84.48 | PREDICTED: uncharacterized protein LOC103486747 [Cucumis melo] >KAA0043750.1 unc... | [more] |
| KAG6596247.1 | 3.3e-120 | 80.59 | hypothetical protein SDJN03_09427, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
| XP_022940190.1 | 4.3e-120 | 80.59 | uncharacterized protein LOC111445889 [Cucurbita moschata] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A5D3DP12 | 3.7e-125 | 84.48 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
| A0A1S3B7V6 | 3.7e-125 | 84.48 | uncharacterized protein LOC103486747 OS=Cucumis melo OX=3656 GN=LOC103486747 PE=... | [more] |
| A0A6J1FPV5 | 2.1e-120 | 80.59 | uncharacterized protein LOC111445889 OS=Cucurbita moschata OX=3662 GN=LOC1114458... | [more] |
| A0A6J1I6B9 | 2.7e-120 | 80.95 | uncharacterized protein LOC111470036 OS=Cucurbita maxima OX=3661 GN=LOC111470036... | [more] |
| A0A6J1DD17 | 1.8e-119 | 79.64 | uncharacterized protein LOC111019361 OS=Momordica charantia OX=3673 GN=LOC111019... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| AT2G41950.1 | 4.8e-69 | 61.03 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... | [more] |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Type |
|---|
| ClCG10G017680.1-exon | ClCG10G017680.1-exon-CG_Chr10:32550383..32551317 | exon |
| ClCG10G017680.1-exon | ClCG10G017680.1-exon-CG_Chr10:32551750..32552527 | exon |
| ClCG10G017680.1-exon | ClCG10G017680.1-exon-CG_Chr10:32553305..32553880 | exon |
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Type |
|---|
| ClCG10G017680.1-three_prime_utr | ClCG10G017680.1-three_prime_utr-CG_Chr10:32550383..32551111 | three_prime_UTR |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Type |
|---|
| ClCG10G017680.1-cds | ClCG10G017680.1-cds-CG_Chr10:32551112..32551317 | CDS |
| ClCG10G017680.1-cds | ClCG10G017680.1-cds-CG_Chr10:32551750..32552371 | CDS |
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Type |
|---|
| ClCG10G017680.1-five_prime_utr | ClCG10G017680.1-five_prime_utr-CG_Chr10:32552372..32552527 | five_prime_UTR |
| ClCG10G017680.1-five_prime_utr | ClCG10G017680.1-five_prime_utr-CG_Chr10:32553305..32553880 | five_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
| Feature Name | Unique Name | Type |
|---|
| ClCG10G017680.1 | ClCG10G017680.1-protein | polypeptide |
