
ClCG10G017680 (gene) Watermelon (Charleston Gray) v2.5
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTTCCTTATTTAGTATTTTTCTTATTTGTATTTTGTATGTGTGTATCTACACTAGTAAGCCTATGTGTAAAGTCTGCAATTATTCAATAGAATATCCAAGCTGAGAGCCCATTTTTAGGGTTCCAAGTTGCCGCCGCCGCCGCCCTGTTCCGTCTCCGATCCGGTCTGCCGCCACTCACTTTTCTCCGTCGATCCGCTCCGATTTGTTCTCCGTTTGATCTGTTCGTCCGCACCATAGATCTACTCGCCCAGATCCGCTGCTCCAAACCCGCTGCGGCACCAGATCTGTCGTTCGCACGCGTCGTTCTGCCTGCCCAGATCTGTTCGGTCGGCACTATCACTCGAGATCTGTCACCGTCGCCCGGATCTGCTTGTGAAGGAGCTCCACCGCCTCCAACAACGAACAGATCTGCTCCAATCCGCACGACTGCAGCCCAGATCTGGTCCGTTCGTGCCGATCTGCTCTGATCAGCCCCGATCCAAGTTTAATATCCGTCACTTCCGTTCGTGCCGACCTGCCGTTCCAGATTCGTCACTTCCACTCAGATCTGACCCGCTCGCGGCCTGCCGTTCGAGGTCCGTCACTTCCGTCAACGACTGTTCTGGTCTCCCAGATCTGTTCGTGTGTCTCTGTCTCCGTTAGTTGGTTAACTTTTCCTGTTTGTCTGTGATGGGCTGTACATTATTTTCACTAGTGGAGTTCCTTTGAGTTATAAGAACACTTTCTCCAAAATGTTAATGCCCCTTTAGTAAGGGTTTGGTTTTTAGTTCTCTTTTTAAAATTTAAATCTTTTTAAAGAAACACTTACACTCCTCGTCATATTCTAAAAACAAATCACTATTTGAGAATTATTTTTTTTAATTTTCAAAATTTTGGTTTGACTTTTGAAAACATGAATAGAAAGTGAATAACAAAATCTTAGTTATGGTGGAAGTAATGTTTATAAATTTAATTTTCAAAAACGAAAATTCAAATTGGTAACAAATGGGGCCGTTTCTTGCTACTGAAAATTCGAAGAATTTTTCTTTTACTTTCTTTTATAGTGTTTGGCTTGAACTCATTTTCTCTAACGCCTAATTGATACCTAAACAAAACCAGGCTGGCTATCTTAATAGATGTTCGAAGTTGCAAACCCAATTACTTGTTATGTGATCAAAGATTAAAGAGATTTAAACATTTGAAGTATCTTCAGAAGAGTAAAGCAGACACAATTTCCAAATATTGTGTGTGTATTCTGTTTTTAGAGATGGAAATACTCTTTGATATTAGATGGACTGGCTTAATCGTTGATACCTGAAGAGTTATGAGAATTACCAAAATCTGGGTTGAGCTTGCTAACTGTGCTTTCACAGGTGAATGGGGAATTTAAGGAGTAAACTGCAATGGATGTACTAACAGAGGCATAGAGTGCAGCACATTGTGATTCCAATTCCACCTGCAACTGCAAACAAAGCCCGGGACAACTCCCTTTTGCCTTCCAGGCCATAAAGAGAAACCATATTTCTTCCATGAATTCTCTGTTTTTACACTCTTCTCTTAGTCCATCACTTACTTGCAAACCTCGGCCGCGTCCTCTTAAGAGGCCTATACATATATGTGCACTACGTGGCTCTCATCATAATACTCGGATATTTGCTCCTTCGATATTATTTCCTTTCAAATTGTGTCCAGCCGTTCATACTAGTAGACCAATCGCCTGTTTTTCAACTCCTTCAAATGAAGGTGTAGTATCTGTAATCAATTTTGAAGATTTAGTTGAGAAGGACTTCTCTTTTCTCGATTCACACGACCTTATTTCCACAGAAGAGCATGATCAAAAGATTAGGCGGATTATTTCTGCTGGAGAGATTGCAGAAAGTTCTCAGGTTATGGTTTCCATTTCTTCAGAAGGATTTGTTGATCAGTTGTTTGACTTAGCTCCTTGCACAAGTTTGCTTGTTGTCCATGATTCTATTTTAACATTAGCTTGTATTAAAGAAAAATATGACAAAGTTAAGTGTTGGCAAGGAGAAGTTATATATGTACCAGAAAAATGGGGACCTTTCGATGTTGTATTTCTCTATTATCTTCCAGCCATGCCTTTCGAACTTGACGCAATTGTTGGAGCACTTTCAAAACGTTGTGTATCAGGTACAATTCTTATTTTGTTCTGTAAATTTCAAATTTTAGTGTATTACATTGGCTACTCGAATTGCTGAGTATGTGGCCAATTTATTCTAAGTTCCCAAATGATCTGTTTGTTTCTATAGTTTGTATTTGTTGGTAATTGCTGAGTATATGGCGTATTGAACTGTATTAGATTTAATGTGGTTCAATACACACGGAAAATTATGGGCATGTGTGCACGCATTATATAAACAGTTCTTATTTTGTAGCATATGCTATGCTTACACTGTTTTTCTGGCAAATAACCACGCTTAATTGTTTTGTGTACATAACTTCTTACCATATTTGTTCGATCTCCGTATCATATGTTATGGCTTTTAGCAAATAAAATCACATGGAAACGAAATTCTTGCTTGATTTATTATAAAGTCATCTATTTTCTTTGTTGCTCAATAGGTGGAAGACTAGTTATTAGCCATCCCAACGGAAGGAAAGCATTAGAGCAAGAACAACAACAGTTCCCAGATGTCGTAGTTTCGGATTTACCTGATAGGATGACTTTGCAGAAAGCTGCTGCAGATCACTCTTTTGACTTGATTGAATTTATAGATGAGTATAGCTTTTATCTTGCAATTTTGAAGTTCCACAAGGATAGAAGTTAAGCCTAAATATTTCATCAAGGCTAGGAGTTCCATGTCTAAATCCTGCTGCAAAACTTTTGTGATTTGGATAAACAAAATTTTGCTGTTTTATCATTTATCAATGGTACAGTACATACTATTTTATGAAATCCTGAATCAGATCAAGTTCCTAAGTTGGGTATAGGTGAAAAATGATAATAACTAAATGAGCAAGATTTGGGCGTCTTGACAATTTCCTTTCAAAGATGCTTTTAACTGAAGATTAATGGAATAAAATTACAAATTATAGGAGAGATTTACTGTGCTCACGCTGTGCCTTCGCCTGCACCTGTATGTTAACCAAAATGTGAATAATCTCATGGATGTGGTTGAGATTCAGGTCCCGGTGGTTTTGAAGAATTCAGAAGTGGCTGGAGGGCCTTAACCACAATTGTCATGTTTGGCCTGAAGTCAGCCTCGTACTGAACACACAGGGCTGCAACTGCTGCCAACTGAGAGTGATTCACATGAAAATAATAGTGGAATAAGAATCCAATCTGAAACATCTACAAAGATGAAAACTAATATGCCTTTAAACTTTGTCGTTGTAACGTAGTAAAATTGCCCAGATTTCAGTTCAGGTTTGTCAGGTTTGTGTGATTAGAGGTTAACTTGATTAATTCCTGGTTGAAATTTTGATTACCGAAGACAATGTATGGGAGTGTTTATGACCTTCCTACCCCAGAGTAATAGATGATTATCATGGTTTCT TTTCCTTATTTAGTATTTTTCTTATTTGTATTTTGTATGTGTGTATCTACACTAGTAAGCCTATGTGTAAAGTCTGCAATTATTCAATAGAATATCCAAGCTGAGAGCCCATTTTTAGGGTTCCAAGTTGCCGCCGCCGCCGCCCTGTTCCGTCTCCGATCCGGTCTGCCGCCACTCACTTTTCTCCGTCGATCCGCTCCGATTTGTTCTCCGTTTGATCTGTTCGTCCGCACCATAGATCTACTCGCCCAGATCCGCTGCTCCAAACCCGCTGCGGCACCAGATCTGTCGTTCGCACGCGTCGTTCTGCCTGCCCAGATCTGTTCGGTCGGCACTATCACTCGAGATCTGTCACCGTCGCCCGGATCTGCTTGTGAAGGAGCTCCACCGCCTCCAACAACGAACAGATCTGCTCCAATCCGCACGACTGCAGCCCAGATCTGGTCCGTTCGTGCCGATCTGCTCTGATCAGCCCCGATCCAAGTTTAATATCCGTCACTTCCGTTCGTGCCGACCTGCCGTTCCAGATTCGTCACTTCCACTCAGATCTGACCCGCTCGCGGCCTGCCGTTCGAGGTGAATGGGGAATTTAAGGAGTAAACTGCAATGGATGTACTAACAGAGGCATAGAGTGCAGCACATTGTGATTCCAATTCCACCTGCAACTGCAAACAAAGCCCGGGACAACTCCCTTTTGCCTTCCAGGCCATAAAGAGAAACCATATTTCTTCCATGAATTCTCTGTTTTTACACTCTTCTCTTAGTCCATCACTTACTTGCAAACCTCGGCCGCGTCCTCTTAAGAGGCCTATACATATATGTGCACTACGTGGCTCTCATCATAATACTCGGATATTTGCTCCTTCGATATTATTTCCTTTCAAATTGTGTCCAGCCGTTCATACTAGTAGACCAATCGCCTGTTTTTCAACTCCTTCAAATGAAGGTGTAGTATCTGTAATCAATTTTGAAGATTTAGTTGAGAAGGACTTCTCTTTTCTCGATTCACACGACCTTATTTCCACAGAAGAGCATGATCAAAAGATTAGGCGGATTATTTCTGCTGGAGAGATTGCAGAAAGTTCTCAGGTTATGGTTTCCATTTCTTCAGAAGGATTTGTTGATCAGTTGTTTGACTTAGCTCCTTGCACAAGTTTGCTTGTTGTCCATGATTCTATTTTAACATTAGCTTGTATTAAAGAAAAATATGACAAAGTTAAGTGTTGGCAAGGAGAAGTTATATATGTACCAGAAAAATGGGGACCTTTCGATGTTGTATTTCTCTATTATCTTCCAGCCATGCCTTTCGAACTTGACGCAATTGTTGGAGCACTTTCAAAACGTTGTGTATCAGGTGGAAGACTAGTTATTAGCCATCCCAACGGAAGGAAAGCATTAGAGCAAGAACAACAACAGTTCCCAGATGTCGTAGTTTCGGATTTACCTGATAGGATGACTTTGCAGAAAGCTGCTGCAGATCACTCTTTTGACTTGATTGAATTTATAGATGAGTATAGCTTTTATCTTGCAATTTTGAAGTTCCACAAGGATAGAAGTTAAGCCTAAATATTTCATCAAGGCTAGGAGTTCCATGTCTAAATCCTGCTGCAAAACTTTTGTGATTTGGATAAACAAAATTTTGCTGTTTTATCATTTATCAATGGTACAGTACATACTATTTTATGAAATCCTGAATCAGATCAAGTTCCTAAGTTGGGTATAGGTGAAAAATGATAATAACTAAATGAGCAAGATTTGGGCGTCTTGACAATTTCCTTTCAAAGATGCTTTTAACTGAAGATTAATGGAATAAAATTACAAATTATAGGAGAGATTTACTGTGCTCACGCTGTGCCTTCGCCTGCACCTGTATGTTAACCAAAATGTGAATAATCTCATGGATGTGGTTGAGATTCAGGTCCCGGTGGTTTTGAAGAATTCAGAAGTGGCTGGAGGGCCTTAACCACAATTGTCATGTTTGGCCTGAAGTCAGCCTCGTACTGAACACACAGGGCTGCAACTGCTGCCAACTGAGAGTGATTCACATGAAAATAATAGTGGAATAAGAATCCAATCTGAAACATCTACAAAGATGAAAACTAATATGCCTTTAAACTTTGTCGTTGTAACGTAGTAAAATTGCCCAGATTTCAGTTCAGGTTTGTCAGGTTTGTGTGATTAGAGGTTAACTTGATTAATTCCTGGTTGAAATTTTGATTACCGAAGACAATGTATGGGAGTGTTTATGACCTTCCTACCCCAGAGTAATAGATGATTATCATGGTTTCT ATGAATTCTCTGTTTTTACACTCTTCTCTTAGTCCATCACTTACTTGCAAACCTCGGCCGCGTCCTCTTAAGAGGCCTATACATATATGTGCACTACGTGGCTCTCATCATAATACTCGGATATTTGCTCCTTCGATATTATTTCCTTTCAAATTGTGTCCAGCCGTTCATACTAGTAGACCAATCGCCTGTTTTTCAACTCCTTCAAATGAAGGTGTAGTATCTGTAATCAATTTTGAAGATTTAGTTGAGAAGGACTTCTCTTTTCTCGATTCACACGACCTTATTTCCACAGAAGAGCATGATCAAAAGATTAGGCGGATTATTTCTGCTGGAGAGATTGCAGAAAGTTCTCAGGTTATGGTTTCCATTTCTTCAGAAGGATTTGTTGATCAGTTGTTTGACTTAGCTCCTTGCACAAGTTTGCTTGTTGTCCATGATTCTATTTTAACATTAGCTTGTATTAAAGAAAAATATGACAAAGTTAAGTGTTGGCAAGGAGAAGTTATATATGTACCAGAAAAATGGGGACCTTTCGATGTTGTATTTCTCTATTATCTTCCAGCCATGCCTTTCGAACTTGACGCAATTGTTGGAGCACTTTCAAAACGTTGTGTATCAGGTGGAAGACTAGTTATTAGCCATCCCAACGGAAGGAAAGCATTAGAGCAAGAACAACAACAGTTCCCAGATGTCGTAGTTTCGGATTTACCTGATAGGATGACTTTGCAGAAAGCTGCTGCAGATCACTCTTTTGACTTGATTGAATTTATAGATGAGTATAGCTTTTATCTTGCAATTTTGAAGTTCCACAAGGATAGAAGTTAA MNSLFLHSSLSPSLTCKPRPRPLKRPIHICALRGSHHNTRIFAPSILFPFKLCPAVHTSRPIACFSTPSNEGVVSVINFEDLVEKDFSFLDSHDLISTEEHDQKIRRIISAGEIAESSQVMVSISSEGFVDQLFDLAPCTSLLVVHDSILTLACIKEKYDKVKCWQGEVIYVPEKWGPFDVVFLYYLPAMPFELDAIVGALSKRCVSGGRLVISHPNGRKALEQEQQQFPDVVVSDLPDRMTLQKAAADHSFDLIEFIDEYSFYLAILKFHKDRS Homology
BLAST of ClCG10G017680 vs. NCBI nr
Match: XP_038905691.1 (uncharacterized protein LOC120091662 [Benincasa hispida]) HSP 1 Score: 481.9 bits (1239), Expect = 3.7e-132 Identity = 238/275 (86.55%), Postives = 251/275 (91.27%), Query Frame = 0
BLAST of ClCG10G017680 vs. NCBI nr
Match: XP_004136559.1 (uncharacterized protein LOC101219545 [Cucumis sativus] >KAE8651132.1 hypothetical protein Csa_002541 [Cucumis sativus]) HSP 1 Score: 466.5 bits (1199), Expect = 1.6e-127 Identity = 237/275 (86.18%), Postives = 245/275 (89.09%), Query Frame = 0
BLAST of ClCG10G017680 vs. NCBI nr
Match: XP_008443029.1 (PREDICTED: uncharacterized protein LOC103486747 [Cucumis melo] >KAA0043750.1 uncharacterized protein E6C27_scaffold236G00790 [Cucumis melo var. makuwa] >TYK25383.1 uncharacterized protein E5676_scaffold352G005240 [Cucumis melo var. makuwa]) HSP 1 Score: 457.6 bits (1176), Expect = 7.6e-125 Identity = 234/277 (84.48%), Postives = 245/277 (88.45%), Query Frame = 0
BLAST of ClCG10G017680 vs. NCBI nr
Match: KAG6596247.1 (hypothetical protein SDJN03_09427, partial [Cucurbita argyrosperma subsp. sororia] >KAG7027789.1 hypothetical protein SDJN02_08966, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 442.2 bits (1136), Expect = 3.3e-120 Identity = 220/273 (80.59%), Postives = 237/273 (86.81%), Query Frame = 0
BLAST of ClCG10G017680 vs. NCBI nr
Match: XP_022940190.1 (uncharacterized protein LOC111445889 [Cucurbita moschata]) HSP 1 Score: 441.8 bits (1135), Expect = 4.3e-120 Identity = 220/273 (80.59%), Postives = 237/273 (86.81%), Query Frame = 0
BLAST of ClCG10G017680 vs. ExPASy TrEMBL
Match: A0A5D3DP12 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G005240 PE=4 SV=1) HSP 1 Score: 457.6 bits (1176), Expect = 3.7e-125 Identity = 234/277 (84.48%), Postives = 245/277 (88.45%), Query Frame = 0
BLAST of ClCG10G017680 vs. ExPASy TrEMBL
Match: A0A1S3B7V6 (uncharacterized protein LOC103486747 OS=Cucumis melo OX=3656 GN=LOC103486747 PE=4 SV=1) HSP 1 Score: 457.6 bits (1176), Expect = 3.7e-125 Identity = 234/277 (84.48%), Postives = 245/277 (88.45%), Query Frame = 0
BLAST of ClCG10G017680 vs. ExPASy TrEMBL
Match: A0A6J1FPV5 (uncharacterized protein LOC111445889 OS=Cucurbita moschata OX=3662 GN=LOC111445889 PE=4 SV=1) HSP 1 Score: 441.8 bits (1135), Expect = 2.1e-120 Identity = 220/273 (80.59%), Postives = 237/273 (86.81%), Query Frame = 0
BLAST of ClCG10G017680 vs. ExPASy TrEMBL
Match: A0A6J1I6B9 (uncharacterized protein LOC111470036 OS=Cucurbita maxima OX=3661 GN=LOC111470036 PE=4 SV=1) HSP 1 Score: 441.4 bits (1134), Expect = 2.7e-120 Identity = 221/273 (80.95%), Postives = 238/273 (87.18%), Query Frame = 0
BLAST of ClCG10G017680 vs. ExPASy TrEMBL
Match: A0A6J1DD17 (uncharacterized protein LOC111019361 OS=Momordica charantia OX=3673 GN=LOC111019361 PE=4 SV=1) HSP 1 Score: 438.7 bits (1127), Expect = 1.8e-119 Identity = 219/275 (79.64%), Postives = 237/275 (86.18%), Query Frame = 0
BLAST of ClCG10G017680 vs. TAIR 10
Match: AT2G41950.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, plant-type cell wall; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 53 Blast hits to 53 proteins in 24 species: Archae - 0; Bacteria - 27; Metazoa - 0; Fungi - 0; Plants - 26; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 258.8 bits (660), Expect = 4.8e-69 Identity = 130/213 (61.03%), Postives = 161/213 (75.59%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
|